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Gene: Garin2 (golgi associated RAB2 interactor family member 2) Rattus norvegicus

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Symbol:

Garin2

Name:

golgi associated RAB2 interactor family member 2

RGD ID:

1564393

Description:

Predicted to act upstream of or within several processes, including flagellated sperm motility; penetration of zona pellucida; and spermatid development. Predicted to be located in sperm midpiece. Predicted to be active in sperm head. Orthologous to human GARIN2 (golgi associated RAB2 interactor family member 2); INTERACTS WITH bisphenol A; trichloroethene; 2,3,7,8-tetrachlorodibenzodioxine (ortholog).

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

Fam71d; family with sequence similarity 71, member D; Golgi-associated RAB2 interactor protein 2; hypothetical protein LOC366671; LOC366671; similar to RIKEN cDNA 4921509E07; uncharacterized protein LOC366671

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	6	103,223,142 - 103,267,822 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	6	103,223,365 - 103,267,819 (+)	Ensembl				GRCr8
mRatBN7.2	6	97,489,562 - 97,534,729 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	6	97,490,368 - 97,534,763 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	6	97,927,192 - 97,965,915 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	6	98,226,354 - 98,265,075 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	6	97,605,963 - 97,644,557 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	6	101,864,567 - 101,910,312 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	6	101,865,917 - 101,904,500 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	6	111,244,328 - 111,286,317 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	6	101,309,705 - 101,348,288 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	6	95,879,658 - 95,918,195 (+)	NCBI		Celera
Cytogenetic Map	6	q24	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

2,3,7,8-tetrachlorodibenzodioxine (ISO)

aflatoxin B1 (ISO)

benzo[a]pyrene (ISO)

bisphenol A (EXP)

bisphenol F (ISO)

cadmium atom (ISO)

cadmium dichloride (ISO)

endosulfan (ISO)

formaldehyde (ISO)

malathion (ISO)

silicon dioxide (ISO)

silver atom (ISO)

silver(0) (ISO)

sodium arsenite (ISO)

taurodeoxycholic acid (ISO)

trichloroethene (EXP)

valproic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cell morphogenesis (ISO)

flagellated sperm motility (ISO)

penetration of zona pellucida (ISO)

spermatid development (IEA,ISO)

Cellular Component

sperm head (ISO)

sperm midpiece (ISO)

Molecular Function

protein binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
2.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
3.	Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences.	Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11.

Genomics

Comparative Map Data

Garin2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	6	103,223,142 - 103,267,822 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	6	103,223,365 - 103,267,819 (+)	Ensembl				GRCr8
mRatBN7.2	6	97,489,562 - 97,534,729 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	6	97,490,368 - 97,534,763 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	6	97,927,192 - 97,965,915 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	6	98,226,354 - 98,265,075 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	6	97,605,963 - 97,644,557 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	6	101,864,567 - 101,910,312 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	6	101,865,917 - 101,904,500 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	6	111,244,328 - 111,286,317 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	6	101,309,705 - 101,348,288 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	6	95,879,658 - 95,918,195 (+)	NCBI		Celera
Cytogenetic Map	6	q24	NCBI

GARIN2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	14	67,189,440 - 67,228,558 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	14	67,189,393 - 67,228,550 (+)	Ensembl			hg38	GRCh38
GRCh37	14	67,656,157 - 67,695,275 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	14	66,725,899 - 66,765,020 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	14	66,725,898 - 66,765,020	NCBI
Celera	14	47,715,205 - 47,754,324 (+)	NCBI		Celera
Cytogenetic Map	14	q23.3	NCBI
HuRef	14	47,825,422 - 47,864,638 (+)	NCBI		HuRef
CHM1_1	14	67,594,688 - 67,633,886 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	14	61,396,563 - 61,435,683 (+)	NCBI		T2T-CHM13v2.0

Garin2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	12	78,738,257 - 78,781,290 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	12	78,738,309 - 78,781,290 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	12	78,691,484 - 78,734,519 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	12	78,691,535 - 78,734,516 (+)	Ensembl			mm10	GRCm38
MGSCv37	12	79,792,522 - 79,835,506 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	12	79,610,515 - 79,653,352 (+)	NCBI		MGSCv36	mm8
Celera	12	80,154,785 - 80,199,129 (+)	NCBI		Celera
Cytogenetic Map	12	C3	NCBI
cM Map	12	35.51	NCBI

Garin2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955466	2,971,683 - 3,004,016 (-)	Ensembl
ChiLan1.0	NW_004955466	2,968,538 - 3,009,551 (-)	NCBI	ChiLan1.0	ChiLan1.0

LOC100970151
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	15	68,303,274 - 68,304,775 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	14	67,519,786 - 67,521,287 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	14	47,762,751 - 47,774,369 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	14	66,642,119 - 66,681,217 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	14	66,650,977 - 66,677,965 (+)	Ensembl			panPan2	panpan1.1

GARIN2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	8	41,223,071 - 41,237,619 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	8	41,219,653 - 41,245,895 (+)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	8	40,914,811 - 40,929,343 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	8	41,449,790 - 41,464,322 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	8	41,446,372 - 41,457,127 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	8	41,068,666 - 41,083,194 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	8	41,142,832 - 41,157,333 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	8	41,501,437 - 41,522,083 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Garin2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024408640	63,568,658 - 63,618,934 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936495	10,576,316 - 10,617,405 (+)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936495	10,575,645 - 10,623,152 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

GARIN2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	7	90,923,591 - 90,942,383 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	7	90,929,799 - 90,947,079 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	7	97,234,491 - 97,262,577 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

GARIN2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	24	44,428,348 - 44,470,804 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	24	44,437,171 - 44,466,718 (+)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666053	32,656,886 - 32,696,536 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Garin2
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624734	33,804,462 - 33,834,540 (-)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624734	33,780,215 - 33,846,638 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Garin2
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	7	92,819,424 - 92,846,187 (+)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Garin2
230 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	44
Count of miRNA genes:	41
Interacting mature miRNAs:	44
Transcripts:	ENSRNOT00000029888
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
2293088	Iddm28	Insulin dependent diabetes mellitus QTL 28	5.21		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	6	68767270	135411972	Rat
1331799	Bp211	Blood pressure QTL 211	3.66407		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	6	88019181	136741135	Rat
61329	Eae9	Experimental allergic encephalomyelitis QTL 9	3.7		body mass (VT:0001259)	change in body weight (CMO:0002045)	6	84490437	129490437	Rat
2313399	Anxrr28	Anxiety related response QTL 28			aggression-related behavior trait (VT:0015014)	tameness/aggressiveness composite score (CMO:0002136)	6	101593607	138161926	Rat
1331789	Rf37	Renal function QTL 37	3.224		kidney blood vessel physiology trait (VT:0100012)	absolute change in renal vascular resistance (CMO:0001900)	6	86494122	112380234	Rat
1331725	Bp212	Blood pressure QTL 212	3.52475		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	6	99437079	125323237	Rat
1331722	Thshl1	Thyroid stimulating hormone level QTL 1	11.7	0.0001	blood thyroid-stimulating hormone amount (VT:0005119)	serum thyroid stimulating hormone level (CMO:0001248)	6	99708426	112483760	Rat
4145119	Mcs25	Mammary carcinoma susceptibility QTL 25		0.0001	mammary gland integrity trait (VT:0010552)	ratio of deaths to total study population during a period of time (CMO:0001023)	6	71278722	116278722	Rat
70176	Mcsm1	Mammary carcinoma susceptibility modifier QTL 1			mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	6	64367996	109367996	Rat
10054138	Gmadr3	Adrenal mass QTL 3	3.68	0.00045	adrenal gland mass (VT:0010420)	both adrenal glands wet weight (CMO:0000164)	6	90871046	135871046	Rat
1581563	Uae33	Urinary albumin excretion QTL 33			urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	6	93560258	136550638	Rat
1641917	Colcr5	Colorectal carcinoma resistance QTL 5	3.18	0.0009	intestine integrity trait (VT:0010554)	benign colorectal tumor number (CMO:0001795)	6	98944780	143944780	Rat
61414	Pia3	Pristane induced arthritis QTL 3	4.5		joint integrity trait (VT:0010548)	post-insult time to onset of experimental arthritis (CMO:0001450)	6	100704576	136029228	Rat
724524	Uae2	Urinary albumin excretion QTL 2	2.7	0.0005	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	6	79198463	144254945	Rat
737827	Hcar11	Hepatocarcinoma resistance QTL 11	4.4		liver integrity trait (VT:0010547)	liver tumorous lesion number (CMO:0001068)	6	46050607	116278722	Rat
2303624	Vencon5	Ventilatory control QTL 5	4.45		respiration trait (VT:0001943)	minute ventilation (CMO:0000132)	6	93778632	138778632	Rat
1576309	Emca7	Estrogen-induced mammary cancer QTL 7	4		mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	6	20859430	113082285	Rat
2293837	Kiddil1	Kidney dilation QTL 1	3.7		kidney pelvis morphology trait (VT:0004194)	hydronephrosis severity score (CMO:0001208)	6	86867923	110125012	Rat
2293842	Kiddil3	Kidney dilation QTL 3	4.3		kidney pelvis morphology trait (VT:0004194)	hydronephrosis severity score (CMO:0001208)	6	86867923	110125012	Rat
10054123	Srcrt6	Stress Responsive Cort QTL 6	2.5	0.0043	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	6	90871046	135871046	Rat
724536	Uae7	Urinary albumin excretion QTL 7	3.5		urine albumin amount (VT:0002871)	urine albumin level (CMO:0000130)	6	93560258	136550638	Rat
1576302	Schws4	Schwannoma susceptibility QTL 4		0.0078	nervous system integrity trait (VT:0010566)	percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017)	6	78204640	123204640	Rat
1581550	Pur8	Proteinuria QTL 8			urine total protein amount (VT:0000032)	urine total protein excretion rate (CMO:0000756)	6	93560258	136550638	Rat
1300075	Glom7	Glomerulus QTL 7	5.6	0.0000002	kidney glomerulus morphology trait (VT:0005325)	count of superficial glomeruli not directly contacting the kidney surface (CMO:0001002)	6	76937178	121937178	Rat
12801471	Schws9	Schwannoma susceptibility QTL 9			nervous system integrity trait (VT:0010566)	percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017)	6	101593607	146593607	Rat

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
7	7	16	106	45	50	20	27	20	6	125	60	2	95	32	53	30	4	4

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001017469	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001434046	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001434048	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001434049	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001434050	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001434051	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001434056	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001434059	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001434060	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001434061	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001434062	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001434063	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001434064	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001434065	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001434066	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001434067	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001434068	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017594252	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017594253	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017594254	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017594255	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017594257	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017594258	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017594259	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039112639	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063262186	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063262187	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063262188	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063262189	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063262190	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063262191	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063262192	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063262193	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063262194	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063262195	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063262196	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063262197	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063262198	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063262199	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063262200	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063262201	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063262202	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063262203	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063262204	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063262205	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063262206	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063262207	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063262208	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063262209	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063262210	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063262211	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063262212	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063262213	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063262214	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063262215	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063262216	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063262217	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063262218	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063262219	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063262220	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063262221	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063262222	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_001838190	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_001838191	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_001838192	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_001838193	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_001838194	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_001838195	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC139976	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC078980	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473947	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000006	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000029888 ⟹ ENSRNOP00000030883

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	6	103,223,427 - 103,262,010 (+)	Ensembl
mRatBN7.2 Ensembl	6	97,490,368 - 97,528,951 (+)	Ensembl
Rnor_6.0 Ensembl	6	101,865,917 - 101,904,500 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000098828 ⟹ ENSRNOP00000088945

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	6	103,223,388 - 103,267,819 (+)	Ensembl
mRatBN7.2 Ensembl	6	97,490,368 - 97,534,763 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000116129 ⟹ ENSRNOP00000083630

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	6	103,223,377 - 103,267,819 (+)	Ensembl
mRatBN7.2 Ensembl	6	97,490,368 - 97,534,763 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000149699 ⟹ ENSRNOP00000112689

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	6	103,223,365 - 103,267,819 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000161205 ⟹ ENSRNOP00000111374

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	6	103,223,392 - 103,266,607 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000169901 ⟹ ENSRNOP00000107809

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	6	103,223,401 - 103,262,010 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000171111 ⟹ ENSRNOP00000110801

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	6	103,226,802 - 103,267,819 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000172084 ⟹ ENSRNOP00000103730

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	6	103,223,384 - 103,264,632 (+)	Ensembl

RefSeq Acc Id:

NM_001017469 ⟹ NP_001017469

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	103,223,427 - 103,262,010 (+)	NCBI
mRatBN7.2	6	97,490,368 - 97,528,951 (+)	NCBI
Rnor_6.0	6	101,865,917 - 101,904,500 (+)	NCBI
Rnor_5.0	6	111,244,328 - 111,286,317 (+)	NCBI
RGSC_v3.4	6	101,309,705 - 101,348,288 (+)	RGD
Celera	6	95,879,658 - 95,918,195 (+)	RGD

Sequence:

show sequence

GCAGAAGCGTGCCCTTTGGAAATAGCTCTCCTGTCTGACATCCAGGAGGTTTCCAGAGATCTGT
CTCAGCAGATTCTATCTACATCATGAAAAGAAGGAAGCCCAAACTGAAGTGAGTCACAAACTTC
ATTCCCATCACAGGACTGTGGCTTGGCCTTGAGGTGAGCATGATGAAGAAGAACAAGAGCAAGA
GCAAGAAGTTAGTGAATAAGCAAGACGCCCTCTGCATCCCACACTATTACAGACTAGGACATCT
TAAGAACATATTAGATGGAGGAGAGTATGCGCCTTATGTATCCCCTCCCATATTGGAGAGCAAT
TTTATTCAGGTCAATAGGAGAGGTGAATCTATTTACCTGCATAACCGAGCAAACTGGGTGACCG
TAGGCATCTGTTCTTCCAATCACGTCTTCAAGACCCCCAATATGATGCTGTTGGCACACCTGAC
GACAGAAGCTCGAAAAGAACAAGAACCCCTCTTTAAAACCATTCTGAAGTCTTCCTCTCCTGGG
AATCTGGTGCTCACCAGGTTTATCCCTCTACAGTTTGTGACTATTTCTGTGCACAGTGCTAAGA
ACATGCGTCTCAAGGTAAAGCTGATCAACGGCCGGTCTTACTACTTACAGCTCTGTGCTCCTAT
GTATAAACAGGATATCATATTTTCTCAGTGGGTAGACCTCATCCCCCTCTTGAATCAGGAGAAA
GCTAAAACTACCCAAGTATCAGAGATCTCAAGCCTCTCAGAGATCACAAACAGCACAGACATCA
CAGGCTCATTGGACATCACAGACATCACTGCTTTACCAGAACTGCAAACCATGTGCTCGAAAAC
GCAGAGATGCCCTTGCAACATCATGGAAAGTGAAGACTTCTCCGAATATACAGATGCCACTGAT
GTCACAGATGTCACTGATGTTCTGGAAAATGAGGTCACAGATGTTCAGGATATAAAAATTGTCA
CAGAAGTCACAGAAGTCTCAGAAGTCCAAATATCCACAAATGTCTCAGGGGTCAAAATAGTATT
TGAAAATGACGATATAATAAAGAACAAGCAGGAGGAAAAGGACAACAATCTGAAGCACAGGAGT
CTACGAGATACAAAAACTAAGAATGACTACCGAGATTCCCCCAAACATGTCTCCATCTCAAACA
GAACCCTGGCTTTGGAAGATGAAGAAACTTTTCAGACTACTCTGACTCCTGTAAAAAGCAAGGA
GGACATATGCAAAGAAATATATGATGAAACTTCTGAAGAAAAGATGATCAGTCTTCAGAACACA
CATCTAAAGGCCACAGAATCCAGATCTAAACACTCCACCCTGGAGAGACTCTTCCGAGACCATC
TTCAGACCCTTCCAAGTGTGCGGTCACAGTTGACTTCCCAGTTCCCGGAGTCTAATCTATTAGG
CGTTAACTACTCCAAGATGAGCTCTACAGGTGGTTCAACCTACGGCAGCCCACGACCCCGACCT
CCACATTTGTATGGGGTAATACATTAAAGTCACTCCGCTCCTCAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_017594253 ⟹ XP_017449742

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	103,223,347 - 103,262,010 (+)	NCBI
mRatBN7.2	6	97,489,562 - 97,528,943 (+)	NCBI
Rnor_6.0	6	101,864,569 - 101,904,433 (+)	NCBI

Sequence:

show sequence

ATTGAAAAAATAAATTTATCCACATGAAAATGGCACTCAATATAAAAAAAATGCCACAGCTATC
CAAGATGAGATATCAGTGCACCTGCTTGGGCCTATATAGAGTCTCCTTTTTCCTAAAAACTACC
AGTTAGATGTAATCCCTGTTCCCAGAGCCTGCTTTATTACACATTCTAGCTTAGCATGACCGTA
AGCTCTGCTTCTGTATATATCCTGATGCCTTTCTTATGTATTGCAAATACATCCATACCAAGAC
TCCAAAGCCAGTTATGGCTCTCATCATAGGATCAGACACCATGTTTATTCTGAAGAACCAAAAT
ACTCTTTGAATCCTGCCCAAACCAAGCACTTGAATCTAGAACTTAAAGACCTGAGTGAAGTGAA
TTCACCAAGGTAGCAGCCCCTCTCTTTACCCATATGTTCAGCCAGCATCCTTTGCATCCTTCAT
CCCCACTTGCAGAAAGAAGGTACCAACACAGGTCTGTATCTCCAGCACATGAGCAGAACACTGA
AGTATGATGGGATGCCGAGAACCTCCTAAACACTGAGAGCAAGGACAGAAGGGGATGGCACGTG
TTTATTTATGTACTCATTTGTCCAACAGTTTACTGAGTGCTTGCTTAATATGTGTCCAGAATAC
AGCAGAGGAAGATACAAAGGTAAAACAATCAGGCCGGATACCTGGTCCTCAGTTGTTTCTAAGC
ACTGTTGCCCTATTGGAAGCTTTGGAGGTTTTTGTTTGTTTCTCGGCTTTACTTCGGTGGGGGT
GGGAAGTTGTTGTTTGCTTTTTTGTTTTTTTGTTCTTTAAGTAGGCTCTTACAGGCTAACCTCA
AATTTACTGTGTATCCTAGGCTTGTTTAAACTCGTTGAAATCCTCCTGCCTCTGCCTCATAAGT
ACTGAAATTACAGGTGTGAGCCACCATGCACAACTTGAAGTTTTTTCTTCAAATGGCTCAAAAT
GCTTTGGAAGTCTCTAAAAACCAGGGCATAGGGCAGCTGAATGATACATTAACAACTGAATGAT
AAAAGTATTTTCAATTTTTATTATTTTTTTTCAGCCCCATCATCATCATCGTGACTTTTCACTT
CTAAAAAAGCTCCATTACTTCATGAGCCTCTGAACTCCCAGCTGCCCCTGTCTGAGCTTCTCAG
GAATGCTGGCAGCAGCCATCTCATGGGCTGGTTGGTCTTTCAGCTGCTCCTGCCCAATGCCCTT
CTTACTTCAGAGCTATGTCAAGCACATTGTGATGCAGGAGCAGTGGCACAATGCTAGGCAGCCC
TTCACCAGATGCTTAGCTGCCTGTTGAGCACACAGAAACACCTCTGTTAAGGAAATGTGAAAGG
AGAAGCAGAAGCGTGCCCTTTGGAAATAGCTCTCCTGTCTGACATCCAGGAGGTTTCCAGAGAT
CTGTCTCAGCAGATTCTATCTACATCATGAAAAGAAGGAAGCCCAAACTGAAGTGAGTCACAAA
CTTCATTCCCATCACAGGACTGTGGCTTGGCCTTGAGGTGAGCATGATGAAGAAGAACAAGAGC
AAGAGCAAGAAGTTAGTGAATAAGCAAGACGCCCTCTGCATCCCACACTATTACAGACTAGGAC
ATCTTAAGAACATATTAGATGGAGGAGAGTATGCGCCTTATGTATCCCCTCCCATATTGGAGAG
CAATTTTATTCAGGTCAATAGGAGAGGTGAATCTATTTACCTGCATAACCGAGCAAACTGGGTG
ACCGTAGGCATCTGTTCTTCCAATCACGTCTTCAAGACCCCCAATATGATGCTGTTGGCACACC
TGACGACAGAAGCTCGAAAAGAACAAGAACCCCTCTTTAAAACCATTCTGAAGTCTTCCTCTCC
TGGGAATCTGGTGCTCACCAGGTTTATCCCTCTACAGTTTGTGACTATTTCTGTGCACAGTGCT
AAGAACATGCGTCTCAAGGTAAAGCTGATCAACGGCCGGTCTTACTACTTACAGCTCTGTGCTC
CTATGTATAAACAGGATATCATATTTTCTCAGTGGGTAGACCTCATCCCCCTCTTGAATCAGGA
GAAAGCTAAAACTACCCAAGTATCAGAGATCTCAAGCCTCTCAGAGATCACAAACAGCACAGAC
ATCACAGGCTCATTGGACATCACAGACATCACTGCTTTACCAGAACTGCAAACCATGTGCTCGA
AAACGCAGAGATGCCCTTGCAACATCATGGAAAGTGAAGACTTCTCCGAATATACAGATGCCAC
TGATGTCACAGATGTCACTGATGTTCTGGAAAATGAGGTCACAGATGTTCAGGATATAAAAATT
GTCACAGAAGTCACAGAAGTCTCAGAAGTCCAAATATCCACAAATGTCTCAGGGGTCAAAATAG
TATTTGAAAATGACGATATAATAAAGAACAAGCAGGAGGAAAAGGACAACAATCTGAAGCACAG
GAGTCTACGAGATACAAAAACTAAGAATGACTACCGAGATTCCCCCAAACATGTCTCCATCTCA
AACAGAACCCTGGCTTTGGAAGATGAAGAAACTTTTCAGACTACTCTGACTCCTGTAAAAAGCA
AGGAGGACATATGCAAAGAAATATATGATGAAACTTCTGAAGAAAAGATGATCAGTCTTCAGAA
CACACATCTAAAGGCCACAGAATCCAGGAGTACAAGAACTGACTCAGACACTTCAGATCTAAAC
ACTCCACCCTGGAGAGACTCTTCCGAGACCATCTTCAGACCCTTCCAAGTGTGCGGTCACAGTT
GACTTCCCAGTTCCCGGAGTCTAATCTATTAGGCGTTAACTACTCCAAGATGAGCTCTACAGGT
GGTTCAACC

hide sequence

RefSeq Acc Id:

XM_017594254 ⟹ XP_017449743

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	103,223,347 - 103,266,611 (+)	NCBI
mRatBN7.2	6	97,489,562 - 97,533,569 (+)	NCBI
Rnor_6.0	6	101,864,568 - 101,909,115 (+)	NCBI

Sequence:

show sequence

TATTGAAAAAATAAATTTATCCACATGAAAATGGCACTCAATATAAAAAAAATGCCACAGCTAT
CCAAGATGAGATATCAGTGCACCTGCTTGGGCCTATATAGAGTCTCCTTTTTCCTAAAAACTAC
CAGTTAGATGTAATCCCTGTTCCCAGAGCCTGCTTTATTACACATTCTAGCTTAGCATGACCGT
AAGCTCTGCTTCTGTATATATCCTGATGCCTTTCTTATGTATTGCAAATACATCCATACCAAGA
CTCCAAAGCCAGTTATGGCTCTCATCATAGGATCAGACACCATGTTTATTCTGAAGAACCAAAA
TACTCTTTGAATCCTGCCCAAACCAAGCACTTGAATCTAGAACTTAAAGACCTGAGTGAAGTGA
ATTCACCAAGGTAGCAGCCCCTCTCTTTACCCATATGTTCAGCCAGCATCCTTTGCATCCTTCA
TCCCCACTTGCAGAAAGAAGGTACCAACACAGGTCTGTATCTCCAGCACATGAGCAGAACACTG
AAGTATGATGGGATGCCGAGAACCTCCTAAACACTGAGAGCAAGGACAGAAGGGGATGGCACGT
GTTTATTTATGTACTCATTTGTCCAACAGTTTACTGAGTGCTTGCTTAATATGTGTCCAGAATA
CAGCAGAGGAAGATACAAAGGTAAAACAATCAGGCCGGATACCTGGTCCTCAGTTGTTTCTAAG
CACTGTTGCCCTATTGGAAGCTTTGGAGGTTTTTGTTTGTTTCTCGGCTTTACTTCGGTGGGGG
TGGGAAGTTGTTGTTTGCTTTTTTGTTTTTTTGTTCTTTAAGTAGGCTCTTACAGGCTAACCTC
AAATTTACTGTGTATCCTAGGCTTGTTTAAACTCGTTGAAATCCTCCTGCCTCTGCCTCATAAG
TACTGAAATTACAGGTGTGAGCCACCATGCACAACTTGAAGTTTTTTCTTCAAATGGCTCAAAA
TGCTTTGGAAGTCTCTAAAAACCAGGGCATAGGGCAGCTGAATGATACATTAACAACTGAATGA
TAAAAGTATTTTCAATTTTTATTATTTTTTTTCAGCCCCATCATCATCATCGTGACTTTTCACT
TCTAAAAAAGCTCCATTACTTCATGAGCCTCTGAACTCCCAGCTGCCCCTGTCTGAGCTTCTCA
GGAATGCTGGCAGCAGCCATCTCATGGGCTGGTTGGTCTTTCAGCTGCTCCTGCCCAATGCCCT
TCTTACTTCAGAGCTATGTCAAGCACATTGTGATGCAGGAGCAGTGGCACAATGCTAGGCAGCC
CTTCACCAGATGCTTAGCTGCCTGTTGAGCACACAGAAACACCTCTGTTAAGGAAATGTGAAAG
GAGAAGCAGAAGCGTGCCCTTTGGAAATAGCTCTCCTGTCTGACATCCAGGAGGTTTCCAGAGA
TCTGTCTCAGCAGATTCTATCTACATCATGAAAAGAAGGAAGCCCAAACTGAAGTGAGTCACAA
ACTTCATTCCCATCACAGGACTGTGGCTTGGCCTTGAGGTGAGCATGATGAAGAAGAACAAGAG
CAAGAGCAAGAAGTTAGTGAATAAGCAAGACGCCCTCTGCATCCCACACTATTACAGACTAGGA
CATCTTAAGAACATATTAGATGGAGGAGAGTATGCGCCTTATGTATCCCCTCCCATATTGGAGA
GCAATTTTATTCAGGTCAATAGGAGAGGTGAATCTATTTACCTGCATAACCGAGCAAACTGGGT
GACCGTAGGCATCTGTTCTTCCAATCACGTCTTCAAGACCCCCAATATGATGCTGTTGGCACAC
CTGACGACAGAAGCTCGAAAAGAACAAGAACCCCTCTTTAAAACCATTCTGAAGTCTTCCTCTC
CTGGGAATCTGGTGCTCACCAGGTTTATCCCTCTACAGTTTGTGACTATTTCTGTGCACAGTGC
TAAGAACATGCGTCTCAAGGTAAAGCTGATCAACGGCCGGTCTTACTACTTACAGCTCTGTGCT
CCTATGTATAAACAGGATATCATATTTTCTCAGTGGGTAGACCTCATCCCCCTCTTGAATCAGG
AGAAAGCTAAAACTACCCAAGTATCAGAGATCTCAAGCCTCTCAGAGATCACAAACAGCACAGA
CATCACAGGCTCATTGGACATCACAGACATCACTGCTTTACCAGAACTGCAAACCATGTGCTCG
AAAACGCAGAGATGCCCTTGCAACATCATGGAAAGTGAAGACTTCTCCGAATATACAGATGCCA
CTGATGTCACAGATGTCACTGATGTTCTGGAAAATGAGGTCACAGATGTTCAGGATATAAAAAT
TGTCACAGAAGTCACAGAAGTCTCAGAAGTCCAAATATCCACAAATGTCTCAGGGGTCAAAATA
GTATTTGAAAATGACGATATAATAAAGAACAAGCAGGAGGAAAAGGACAACAATCTGAAGCACA
GGAGTCTACGAGATACAAAAACTAAGAATGACTACCGAGATTCCCCCAAACATGTCTCCATCTC
AAACAGAACCCTGGCTTTGGAAGATGAAGAAACTTTTCAGACTACTCTGACTCCTGTAAAAAGC
AAGGAGGACATATGCAAAGAAATATATGATGAAACTTCTGAAGAAAAGATGATCAGTCTTCAGA
ACACACATCTAAAGGCCACAGAATCCAGATCAGTACAAACTACTATACTAAAAACAAAGCCCAA
CTCAGAAAAAGGCAATCTCTGCGGGAGGAGAACAGCAAAACCTCTGTGTGGCAGAAATAAAGGC
TAATCACTCCATGAAAATCCATGCCAATCTA

hide sequence

RefSeq Acc Id:

XM_017594255 ⟹ XP_017449744

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	103,223,347 - 103,267,822 (+)	NCBI
mRatBN7.2	6	97,489,562 - 97,534,729 (+)	NCBI
Rnor_6.0	6	101,864,569 - 101,910,312 (+)	NCBI

Sequence:

show sequence

ATTGAAAAAATAAATTTATCCACATGAAAATGGCACTCAATATAAAAAAAATGCCACAGCTATC
CAAGATGAGATATCAGTGCACCTGCTTGGGCCTATATAGAGTCTCCTTTTTCCTAAAAACTACC
AGTTAGATGTAATCCCTGTTCCCAGAGCCTGCTTTATTACACATTCTAGCTTAGCATGACCGTA
AGCTCTGCTTCTGTATATATCCTGATGCCTTTCTTATGTATTGCAAATACATCCATACCAAGAC
TCCAAAGCCAGTTATGGCTCTCATCATAGGATCAGACACCATGTTTATTCTGAAGAACCAAAAT
ACTCTTTGAATCCTGCCCAAACCAAGCACTTGAATCTAGAACTTAAAGACCTGAGTGAAGTGAA
TTCACCAAGGTAGCAGCCCCTCTCTTTACCCATATGTTCAGCCAGCATCCTTTGCATCCTTCAT
CCCCACTTGCAGAAAGAAGGTACCAACACAGGTCTGTATCTCCAGCACATGAGCAGAACACTGA
AGTATGATGGGATGCCGAGAACCTCCTAAACACTGAGAGCAAGGACAGAAGGGGATGGCACGTG
TTTATTTATGTACTCATTTGTCCAACAGTTTACTGAGTGCTTGCTTAATATGTGTCCAGAATAC
AGCAGAGGAAGATACAAAGGTAAAACAATCAGGCCGGATACCTGGTCCTCAGTTGTTTCTAAGC
ACTGTTGCCCTATTGGAAGCTTTGGAGGTTTTTGTTTGTTTCTCGGCTTTACTTCGGTGGGGGT
GGGAAGTTGTTGTTTGCTTTTTTGTTTTTTTGTTCTTTAAGTAGGCTCTTACAGGCTAACCTCA
AATTTACTGTGTATCCTAGGCTTGTTTAAACTCGTTGAAATCCTCCTGCCTCTGCCTCATAAGT
ACTGAAATTACAGGTGTGAGCCACCATGCACAACTTGAAGTTTTTTCTTCAAATGGCTCAAAAT
GCTTTGGAAGTCTCTAAAAACCAGGGCATAGGGCAGCTGAATGATACATTAACAACTGAATGAT
AAAAGTATTTTCAATTTTTATTATTTTTTTTCAGCCCCATCATCATCATCGTGACTTTTCACTT
CTAAAAAAGCTCCATTACTTCATGAGCCTCTGAACTCCCAGCTGCCCCTGTCTGAGCTTCTCAG
GAATGCTGGCAGCAGCCATCTCATGGGCTGGTTGGTCTTTCAGCTGCTCCTGCCCAATGCCCTT
CTTACTTCAGAGCTATGTCAAGCACATTGTGATGCAGGAGCAGTGGCACAATGCTAGGCAGCCC
TTCACCAGATGCTTAGCTGCCTGTTGAGCACACAGAAACACCTCTGTTAAGGAAATGTGAAAGG
AGAAGCAGAAGCGTGCCCTTTGGAAATAGCTCTCCTGTCTGACATCCAGGAGGTTTCCAGAGAT
CTGTCTCAGCAGATTCTATCTACATCATGAAAAGAAGGAAGCCCAAACTGAAGTGAGTCACAAA
CTTCATTCCCATCACAGGACTGTGGCTTGGCCTTGAGGTGAGCATGATGAAGAAGAACAAGAGC
AAGAGCAAGAAGTTAGTGAATAAGCAAGACGCCCTCTGCATCCCACACTATTACAGACTAGGAC
ATCTTAAGAACATATTAGATGGAGGAGAGTATGCGCCTTATGTATCCCCTCCCATATTGGAGAG
CAATTTTATTCAGGTCAATAGGAGAGGTGAATCTATTTACCTGCATAACCGAGCAAACTGGGTG
ACCGTAGGCATCTGTTCTTCCAATCACGTCTTCAAGACCCCCAATATGATGCTGTTGGCACACC
TGACGACAGAAGCTCGAAAAGAACAAGAACCCCTCTTTAAAACCATTCTGAAGTCTTCCTCTCC
TGGGAATCTGGTGCTCACCAGGTTTATCCCTCTACAGTTTGTGACTATTTCTGTGCACAGTGCT
AAGAACATGCGTCTCAAGGTAAAGCTGATCAACGGCCGGTCTTACTACTTACAGCTCTGTGCTC
CTATGTATAAACAGGATATCATATTTTCTCAGTGGGTAGACCTCATCCCCCTCTTGAATCAGGA
GAAAGCTAAAACTACCCAAGTATCAGAGATCTCAAGCCTCTCAGAGATCACAAACAGCACAGAC
ATCACAGGCTCATTGGACATCACAGACATCACTGCTTTACCAGAACTGCAAACCATGTGCTCGA
AAACGCAGAGATGCCCTTGCAACATCATGGAAAGTGAAGACTTCTCCGAATATACAGATGCCAC
TGATGTCACAGATGTCACTGATGTTCTGGAAAATGAGGTCACAGATGTTCAGGATATAAAAATT
GTCACAGAAGTCACAGAAGTCTCAGAAGTCCAAATATCCACAAATGTCTCAGGGGTCAAAATAG
TATTTGAAAATGACGATATAATAAAGAACAAGCAGGAGGAAAAGGACAACAATCTGAAGCACAG
GAGTCTACGAGATACAAAAACTAAGAATGACTACCGAGATTCCCCCAAACATGTCTCCATCTCA
AACAGAACCCTGGCTTTGGAAGATGAAGAAACTTTTCAGACTACTCTGACTCCTGTAAAAAGCA
AGGAGGACATATGCAAAGAAATATATGATGAAACTTCTGAAGAAAAGATGATCAGTCTTCAGAA
CACACATCTAAAGGCCACAGAATCCAGGAGTACAAGAACTGACTCAGACACTTCAGATGGTGAA
CTGAAGCTTGGAAGATATTTGCTACGGGATTGAACACGAGAAGCCTTATAGCCAAGCACAAACT
CACAAACTCATGCATATTTCTGTTTAGTAGTGCTCTAGAGAACAATCCTTTACCCATTCTCTTG
GCCCACTGCCCAGGGGATTTGTCTTCCTTCACCTGATGCTCTAAAGATGGAAAGAATTTCTTTC
CCACCTCCACATCAAGAAAAAGATCTCCAGACGTCAACAAGAGACTACTACCGGTGATGTATTA
AATTCGGAAGTACAAATAAACATTTTGCAATTTGGAAA

hide sequence

RefSeq Acc Id:

XM_017594257 ⟹ XP_017449746

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	103,223,347 - 103,266,611 (+)	NCBI
mRatBN7.2	6	97,489,562 - 97,533,534 (+)	NCBI
Rnor_6.0	6	101,864,569 - 101,909,087 (+)	NCBI

Sequence:

show sequence

ATTGAAAAAATAAATTTATCCACATGAAAATGGCACTCAATATAAAAAAAATGCCACAGCTATC
CAAGATGAGATATCAGTGCACCTGCTTGGGCCTATATAGAGTCTCCTTTTTCCTAAAAACTACC
AGTTAGATGTAATCCCTGTTCCCAGAGCCTGCTTTATTACACATTCTAGCTTAGCATGACCGTA
AGCTCTGCTTCTGTATATATCCTGATGCCTTTCTTATGTATTGCAAATACATCCATACCAAGAC
TCCAAAGCCAGTTATGGCTCTCATCATAGGATCAGACACCATGTTTATTCTGAAGAACCAAAAT
ACTCTTTGAATCCTGCCCAAACCAAGCACTTGAATCTAGAACTTAAAGACCTGAGTGAAGTGAA
TTCACCAAGGTAGCAGCCCCTCTCTTTACCCATATGTTCAGCCAGCATCCTTTGCATCCTTCAT
CCCCACTTGCAGAAAGAAGGTACCAACACAGGTCTGTATCTCCAGCACATGAGCAGAACACTGA
AGTATGATGGGATGCCGAGAACCTCCTAAACACTGAGAGCAAGGACAGAAGGGGATGGCACGTG
TTTATTTATGTACTCATTTGTCCAACAGTTTACTGAGTGCTTGCTTAATATGTGTCCAGAATAC
AGCAGAGGAAGATACAAAGGTAAAACAATCAGGCCGGATACCTGGTCCTCAGTTGTTTCTAAGC
ACTGTTGCCCTATTGGAAGCTTTGGAGGTTTTTGTTTGTTTCTCGGCTTTACTTCGGTGGGGGT
GGGAAGTTGTTGTTTGCTTTTTTGTTTTTTTGTTCTTTAAGTAGGCTCTTACAGGCTAACCTCA
AATTTACTGTGTATCCTAGGCTTGTTTAAACTCGTTGAAATCCTCCTGCCTCTGCCTCATAAGT
ACTGAAATTACAGGTGTGAGCCACCATGCACAACTTGAAGTTTTTTCTTCAAATGGCTCAAAAT
GCTTTGGAAGTCTCTAAAAACCAGGGCATAGGGCAGCTGAATGATACATTAACAACTGAATGAT
AAAAGTATTTTCAATTTTTATTATTTTTTTTCAGCCCCATCATCATCATCGTGACTTTTCACTT
CTAAAAAAGCTCCATTACTTCATGAGCCTCTGAACTCCCAGCTGCCCCTGTCTGAGCTTCTCAG
GAATGCTGGCAGCAGCCATCTCATGGGCTGGTTGGTCTTTCAGCTGCTCCTGCCCAATGCCCTT
CTTACTTCAGAGCTATGTCAAGCACATTGTGATGCAGGAGCAGTGGCACAATGCTAGGCAGCCC
TTCACCAGATGCTTAGCTGCCTGTTGAGCACACAGAAACACCTCTGTTAAGGAAATGTGAAAGG
AGAAGCAGAAGCGTGCCCTTTGGAAATAGCTCTCCTGTCTGACATCCAGGAGGTTTCCAGAGAT
CTGTCTCAGCAGATTCTATCTACATCATGAAAAGAAGGAAGCCCAAACTGAAGTGAGTCACAAA
CTTCATTCCCATCACAGGACTGTGGCTTGGCCTTGAGGTGAGCATGATGAAGAAGAACAAGAGC
AAGAGCAAGAAGTTAGTGAATAAGCAAGACGCCCTCTGCATCCCACACTATTACAGACTAGGAC
ATCTTAAGAACATATTAGATGGAGGAGAGTATGCGCCTTATGTATCCCCTCCCATATTGGAGAG
CAATTTTATTCAGGTCAATAGGAGAGGTGAATCTATTTACCTGCATAACCGAGCAAACTGGGTG
ACCGTAGGCATCTGTTCTTCCAATCACGTCTTCAAGACCCCCAATATGATGCTGTTGGCACACC
TGACGACAGAAGCTCGAAAAGAACAAGAACCCCTCTTTAAAACCATTCTGAAGTCTTCCTCTCC
TGGGAATCTGGTGCTCACCAGGTTTATCCCTCTACAGTTTGTGACTATTTCTGTGCACAGTGCT
AAGAACATGCGTCTCAAGGTAAAGCTGATCAACGGCCGGTCTTACTACTTACAGCTCTGTGCTC
CTATGTATAAACAGGATATCATATTTTCTCAGTGGGTAGACCTCATCCCCCTCTTGAATCAGGA
GAAAGCTAAAACTACCCAAGTATCAGAGATCTCAAGCCTCTCAGAGATCACAAACAGCACAGAC
ATCACAGGCTCATTGGACATCACAGACATCACTGCTTTACCAGAACTGCAAACCATGTGCTCGA
AAACGCAGAGATGCCCTTGCAACATCATGGAAAGTGAAGACTTCTCCGAATATACAGATGCCAC
TGATGTCACAGATGTCACTGATGTTCTGGAAAATGAGGTCACAGATGTTCAGGATATAAAAATT
GTCACAGAAGTCACAGAAGTCTCAGAAGTCCAAATATCCACAAATGTCTCAGGGGTCAAAATAG
TATTTGAAAATGACGATATAATAAAGAACAAGCAGGAGGAAAAGGACAACAATCTGAAGCACAG
GAGTCTACGAGATACAAAAACTAAGAATGACTACCGAGATTCCCCCAAACATGTCTCCATCTCA
AACAGAACCCTGGCTTTGGAAGATGAAGAAACTTTTCAGACTACTCTGACTCCTGTAAAAAGCA
AGGAGGACATATGCAAAGAAATATATGATGAAACTTCTGAAGAAAAGATGATCAGTCTTCAGAA
CACACATCTAAAGGCCACAGAATCCAGGAGTACAAGAACTGACTCAGACACTTCAGATCAGTAC
AAACTACTATACTAAAAACAAAGCCCAACTCAGAAAAAGGCAATCTCTGCGGGAGGAGAACAGC
AAAACCTCTGTGTGGCAGAAATAAAGGCTAA

hide sequence

RefSeq Acc Id:

XM_017594258 ⟹ XP_017449747

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	103,223,347 - 103,264,648 (+)	NCBI
mRatBN7.2	6	97,489,562 - 97,531,530 (+)	NCBI
Rnor_6.0	6	101,864,569 - 101,907,049 (+)	NCBI

Sequence:

show sequence

ATTGAAAAAATAAATTTATCCACATGAAAATGGCACTCAATATAAAAAAAATGCCACAGCTATC
CAAGATGAGATATCAGTGCACCTGCTTGGGCCTATATAGAGTCTCCTTTTTCCTAAAAACTACC
AGTTAGATGTAATCCCTGTTCCCAGAGCCTGCTTTATTACACATTCTAGCTTAGCATGACCGTA
AGCTCTGCTTCTGTATATATCCTGATGCCTTTCTTATGTATTGCAAATACATCCATACCAAGAC
TCCAAAGCCAGTTATGGCTCTCATCATAGGATCAGACACCATGTTTATTCTGAAGAACCAAAAT
ACTCTTTGAATCCTGCCCAAACCAAGCACTTGAATCTAGAACTTAAAGACCTGAGTGAAGTGAA
TTCACCAAGGTAGCAGCCCCTCTCTTTACCCATATGTTCAGCCAGCATCCTTTGCATCCTTCAT
CCCCACTTGCAGAAAGAAGGTACCAACACAGGTCTGTATCTCCAGCACATGAGCAGAACACTGA
AGTATGATGGGATGCCGAGAACCTCCTAAACACTGAGAGCAAGGACAGAAGGGGATGGCACGTG
TTTATTTATGTACTCATTTGTCCAACAGTTTACTGAGTGCTTGCTTAATATGTGTCCAGAATAC
AGCAGAGGAAGATACAAAGGTAAAACAATCAGGCCGGATACCTGGTCCTCAGTTGTTTCTAAGC
ACTGTTGCCCTATTGGAAGCTTTGGAGGTTTTTGTTTGTTTCTCGGCTTTACTTCGGTGGGGGT
GGGAAGTTGTTGTTTGCTTTTTTGTTTTTTTGTTCTTTAAGTAGGCTCTTACAGGCTAACCTCA
AATTTACTGTGTATCCTAGGCTTGTTTAAACTCGTTGAAATCCTCCTGCCTCTGCCTCATAAGT
ACTGAAATTACAGGTGTGAGCCACCATGCACAACTTGAAGTTTTTTCTTCAAATGGCTCAAAAT
GCTTTGGAAGTCTCTAAAAACCAGGGCATAGGGCAGCTGAATGATACATTAACAACTGAATGAT
AAAAGTATTTTCAATTTTTATTATTTTTTTTCAGCCCCATCATCATCATCGTGACTTTTCACTT
CTAAAAAAGCTCCATTACTTCATGAGCCTCTGAACTCCCAGCTGCCCCTGTCTGAGCTTCTCAG
GAATGCTGGCAGCAGCCATCTCATGGGCTGGTTGGTCTTTCAGCTGCTCCTGCCCAATGCCCTT
CTTACTTCAGAGCTATGTCAAGCACATTGTGATGCAGGAGCAGTGGCACAATGCTAGGCAGCCC
TTCACCAGATGCTTAGCTGCCTGTTGAGCACACAGAAACACCTCTGTTAAGGAAATGTGAAAGG
AGAAGCAGAAGCGTGCCCTTTGGAAATAGCTCTCCTGTCTGACATCCAGGAGGTTTCCAGAGAT
CTGTCTCAGCAGATTCTATCTACATCATGAAAAGAAGGAAGCCCAAACTGAAGTGAGTCACAAA
CTTCATTCCCATCACAGGACTGTGGCTTGGCCTTGAGGTGAGCATGATGAAGAAGAACAAGAGC
AAGAGCAAGAAGTTAGTGAATAAGCAAGACGCCCTCTGCATCCCACACTATTACAGACTAGGAC
ATCTTAAGAACATATTAGATGGAGGAGAGTATGCGCCTTATGTATCCCCTCCCATATTGGAGAG
CAATTTTATTCAGGTCAATAGGAGAGGTGAATCTATTTACCTGCATAACCGAGCAAACTGGGTG
ACCGTAGGCATCTGTTCTTCCAATCACGTCTTCAAGACCCCCAATATGATGCTGTTGGCACACC
TGACGACAGAAGCTCGAAAAGAACAAGAACCCCTCTTTAAAACCATTCTGAAGTCTTCCTCTCC
TGGGAATCTGGTGCTCACCAGGTTTATCCCTCTACAGTTTGTGACTATTTCTGTGCACAGTGCT
AAGAACATGCGTCTCAAGGTAAAGCTGATCAACGGCCGGTCTTACTACTTACAGCTCTGTGCTC
CTATGTATAAACAGGATATCATATTTTCTCAGTGGGTAGACCTCATCCCCCTCTTGAATCAGGA
GAAAGCTAAAACTACCCAAGTATCAGAGATCTCAAGCCTCTCAGAGATCACAAACAGCACAGAC
ATCACAGGCTCATTGGACATCACAGACATCACTGCTTTACCAGAACTGCAAACCATGTGCTCGA
AAACGCAGAGATGCCCTTGCAACATCATGGAAAGTGAAGACTTCTCCGAATATACAGATGCCAC
TGATGTCACAGATGTCACTGATGTTCTGGAAAATGAGGTCACAGATGTTCAGGATATAAAAATT
GTCACAGAAGTCACAGAAGTCTCAGAAGTCCAAATATCCACAAATGTCTCAGGGGTCAAAATAG
TATTTGAAAATGACGATATAATAAAGAACAAGCAGGAGGAAAAGGACAACAATCTGAAGCACAG
GAGTCTACGAGATACAAAAACTAAGAATGACTACCGAGATTCCCCCAAACATGTCTCCATCTCA
AACAGAACCCTGGCTTTGGAAGATGAAGAAACTTTTCAGACTACTCTGACTCCTGTAAAAAGCA
AGGAGGACATATGCAAAGAAATATATGATGAAACTTCTGAAGAAAAGATGATCAGTCTTCAGAA
CACACATCTAAAGGCCACAGAATCCAGGCTTATATAGTTTTGCAGTTTTCCCCCTCATTAGTAT
TTCTTTCCCCTTCTTCACCCTCCTCTGATCACGTTTTTCCCTCACACACTCTTACCA

hide sequence

RefSeq Acc Id:

XM_017594259 ⟹ XP_017449748

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	103,223,142 - 103,267,822 (+)	NCBI
mRatBN7.2	6	97,489,562 - 97,534,729 (+)	NCBI
Rnor_6.0	6	101,864,569 - 101,910,312 (+)	NCBI

Sequence:

show sequence

ATTGAAAAAATAAATTTATCCACATGAAAATGGCACTCAATATAAAAAAAATGCCACAGCTATC
CAAGATGAGATATCAGTGCACCTGCTTGGGCCTATATAGAGTCTCCTTTTTCCTAAAAACTACC
AGTTAGATGTAATCCCTGTTCCCAGAGCCTGCTTTATTACACATTCTAGCTTAGCATGACCGTA
AGCTCTGCTTCTGTATATATCCTGATGCCTTTCTTATGTATTGCAAATACATCCATACCAAGAC
TCCAAAGCCAGTTATGGCTCTCATCATAGGATCAGACACCATGTTTATTCTGAAGAACCAAAAT
ACTCTTTGAATCCTGCCCAAACCAAGCACTTGAATCTAGAACTTAAAGACCTGAGTGAAGTGAA
TTCACCAAGGTAGCAGCCCCTCTCTTTACCCATATGTTCAGCCAGCATCCTTTGCATCCTTCAT
CCCCACTTGCAGAAAGAAGGTACCAACACAGGTCTGTATCTCCAGCACATGAGCAGAACACTGA
AGTATGATGGGATGCCGAGAACCTCCTAAACACTGAGAGCAAGGACAGAAGGGGATGGCACGTG
TTTATTTATGTACTCATTTGTCCAACAGTTTACTGAGTGCTTGCTTAATATGTGTCCAGAATAC
AGCAGAGGAAGATACAAAGGTAAAACAATCAGGCCGGATACCTGGTCCTCAGTTGTTTCTAAGC
ACTGTTGCCCTATTGGAAGCTTTGGAGGTTTTTGTTTGTTTCTCGGCTTTACTTCGGTGGGGGT
GGGAAGTTGTTGTTTGCTTTTTTGTTTTTTTGTTCTTTAAGTAGGCTCTTACAGGCTAACCTCA
AATTTACTGTGTATCCTAGGCTTGTTTAAACTCGTTGAAATCCTCCTGCCTCTGCCTCATAAGT
ACTGAAATTACAGGTGTGAGCCACCATGCACAACTTGAAGTTTTTTCTTCAAATGGCTCAAAAT
GCTTTGGAAGTCTCTAAAAACCAGGGCATAGGGCAGCTGAATGATACATTAACAACTGAATGAT
AAAAGTATTTTCAATTTTTATTATTTTTTTTCAGCCCCATCATCATCATCGTGACTTTTCACTT
CTAAAAAAGCTCCATTACTTCATGAGCCTCTGAACTCCCAGCTGCCCCTGTCTGAGCTTCTCAG
GAATGCTGGCAGCAGCCATCTCATGGGCTGGTTGGTCTTTCAGCTGCTCCTGCCCAATGCCCTT
CTTACTTCAGAGCTATGTCAAGCACATTGTGATGCAGGAGCAGTGGCACAATGCTAGGCAGCCC
TTCACCAGATGCTTAGCTGCCTGTTGAGCACACAGAAACACCTCTGTTAAGGAAATGTGAAAGG
AGAAGCAGAAGCGTGCCCTTTGGAAATAGCTCTCCTGTCTGACATCCAGGAGGTTTCCAGAGAT
CTGTCTCAGCAGATTCTATCTACATCATGAAAAGAAGGAAGCCCAAACTGAAGTGAGTCACAAA
CTTCATTCCCATCACAGGACTGTGGCTTGGCCTTGAGGTGAGCATGATGAAGAAGAACAAGAGC
AAGAGCAAGAAGTTAGTGAATAAGCAAGACGCCCTCTGCATCCCACACTATTACAGACTAGGAC
ATCTTAAGAACATATTAGATGGAGGAGAGTATGCGCCTTATGTATCCCCTCCCATATTGGAGAG
CAATTTTATTCAGGTCAATAGGAGAGGTGAATCTATTTACCTGCATAACCGAGCAAACTGGGTG
ACCGTAGGCATCTGTTCTTCCAATCACGTCTTCAAGACCCCCAATATGATGCTGTTGGCACACC
TGACGACAGAAGCTCGAAAAGAACAAGAACCCCTCTTTAAAACCATTCTGAAGTCTTCCTCTCC
TGGGAATCTGGTGCTCACCAGGTTTATCCCTCTACAGTTTGTGACTATTTCTGTGCACAGTGCT
AAGAACATGCGTCTCAAGGTAAAGCTGATCAACGGCCGGTCTTACTACTTACAGCTCTGTGCTC
CTATGTATAAACAGGATATCATATTTTCTCAGTGGGTAGACCTCATCCCCCTCTTGAATCAGGA
GAAAGCTAAAACTACCCAAGTATCAGAGATCTCAAGCCTCTCAGAGATCACAAACAGCACAGAC
ATCACAGGCTCATTGGACATCACAGACATCACTGCTTTACCAGAACTGCAAACCATGTGCTCGA
AAACGCAGAGATGCCCTTGCAACATCATGGAAAGTGAAGACTTCTCCGAATATACAGATGCCAC
TGATGTCACAGATGTCACTGATGTTCTGGAAAATGAGGTCACAGATGTTCAGGATATAAAAATT
GTCACAGAAGTCACAGAAGTCTCAGAAGTCCAAATATCCACAAATGTCTCAGGGGTCAAAATAG
TATTTGAAAATGACGATATAATAAAGAACAAGCAGGAGGAAAAGGACAACAATCTGAAGCACAG
GAGTCTACGAGATACAAAAACTAAGAATGACTACCGAGATTCCCCCAAACATGTCTCCATCTCA
AACAGAACCCTGGCTTTGGAAGATGAAGAAACTTTTCAGACTACTCTGACTCCTGTAAAAAGCA
AGGAGGACATATGCAAAGAAATATATGATGAAACTTCTGAAGAAAAGATGATCAGTCTTCAGAA
CACACATCTAAAGGCCACAGAATCCAGATGGTGAACTGAAGCTTGGAAGATATTTGCTACGGGA
TTGAACACGAGAAGCCTTATAGCCAAGCACAAACTCACAAACTCATGCATATTTCTGTTTAGTA
GTGCTCTAGAGAACAATCCTTTACCCATTCTCTTGGCCCACTGCCCAGGGGATTTGTCTTCCTT
CACCTGATGCTCTAAAGATGGAAAGAATTTCTTTCCCACCTCCACATCAAGAAAAAGATCTCCA
GACGTCAACAAGAGACTACTACCGGTGATGTATTAAATTCGGAAGTACAAATAAACATTTTGCA
ATTTGGAAA

hide sequence

RefSeq Acc Id:

XM_039112639 ⟹ XP_038968567

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	103,223,347 - 103,264,648 (+)	NCBI
mRatBN7.2	6	97,489,562 - 97,531,534 (+)	NCBI

RefSeq Acc Id:

XM_063262186 ⟹ XP_063118256

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	103,223,355 - 103,262,010 (+)	NCBI

RefSeq Acc Id:

XM_063262187 ⟹ XP_063118257

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	103,223,355 - 103,266,611 (+)	NCBI

RefSeq Acc Id:

XM_063262188 ⟹ XP_063118258

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	103,223,360 - 103,262,010 (+)	NCBI

RefSeq Acc Id:

XM_063262189 ⟹ XP_063118259

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	103,223,347 - 103,262,010 (+)	NCBI

RefSeq Acc Id:

XM_063262190 ⟹ XP_063118260

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	103,223,347 - 103,262,010 (+)	NCBI

RefSeq Acc Id:

XM_063262191 ⟹ XP_063118261

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	103,223,347 - 103,262,010 (+)	NCBI

RefSeq Acc Id:

XM_063262192 ⟹ XP_063118262

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	103,223,355 - 103,262,010 (+)	NCBI

RefSeq Acc Id:

XM_063262193 ⟹ XP_063118263

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	103,223,355 - 103,262,010 (+)	NCBI

RefSeq Acc Id:

XM_063262194 ⟹ XP_063118264

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	103,223,358 - 103,262,010 (+)	NCBI

RefSeq Acc Id:

XM_063262195 ⟹ XP_063118265

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	103,223,347 - 103,266,611 (+)	NCBI

RefSeq Acc Id:

XM_063262196 ⟹ XP_063118266

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	103,223,358 - 103,262,010 (+)	NCBI

RefSeq Acc Id:

XM_063262197 ⟹ XP_063118267

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	103,223,356 - 103,264,648 (+)	NCBI

RefSeq Acc Id:

XM_063262198 ⟹ XP_063118268

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	103,223,360 - 103,264,648 (+)	NCBI

RefSeq Acc Id:

XM_063262199 ⟹ XP_063118269

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	103,223,347 - 103,264,648 (+)	NCBI

RefSeq Acc Id:

XM_063262200 ⟹ XP_063118270

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	103,223,355 - 103,264,648 (+)	NCBI

RefSeq Acc Id:

XM_063262201 ⟹ XP_063118271

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	103,223,347 - 103,264,648 (+)	NCBI

RefSeq Acc Id:

XM_063262202 ⟹ XP_063118272

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	103,223,356 - 103,267,822 (+)	NCBI

RefSeq Acc Id:

XM_063262203 ⟹ XP_063118273

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	103,223,361 - 103,267,822 (+)	NCBI

RefSeq Acc Id:

XM_063262204 ⟹ XP_063118274

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	103,223,347 - 103,267,822 (+)	NCBI

RefSeq Acc Id:

XM_063262205 ⟹ XP_063118275

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	103,223,347 - 103,267,822 (+)	NCBI

RefSeq Acc Id:

XM_063262206 ⟹ XP_063118276

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	103,223,347 - 103,267,822 (+)	NCBI

RefSeq Acc Id:

XM_063262207 ⟹ XP_063118277

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	103,223,355 - 103,267,822 (+)	NCBI

RefSeq Acc Id:

XM_063262208 ⟹ XP_063118278

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	103,223,347 - 103,266,611 (+)	NCBI

RefSeq Acc Id:

XM_063262209 ⟹ XP_063118279

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	103,223,356 - 103,267,822 (+)	NCBI

RefSeq Acc Id:

XM_063262210 ⟹ XP_063118280

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	103,223,362 - 103,267,822 (+)	NCBI

RefSeq Acc Id:

XM_063262211 ⟹ XP_063118281

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	103,223,347 - 103,264,648 (+)	NCBI

RefSeq Acc Id:

XM_063262212 ⟹ XP_063118282

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	103,223,347 - 103,267,822 (+)	NCBI

RefSeq Acc Id:

XM_063262213 ⟹ XP_063118283

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	103,223,347 - 103,267,822 (+)	NCBI

RefSeq Acc Id:

XM_063262214 ⟹ XP_063118284

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	103,223,347 - 103,267,822 (+)	NCBI

RefSeq Acc Id:

XM_063262215 ⟹ XP_063118285

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	103,223,356 - 103,267,822 (+)	NCBI

RefSeq Acc Id:

XM_063262216 ⟹ XP_063118286

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	103,223,356 - 103,267,822 (+)	NCBI

RefSeq Acc Id:

XM_063262217 ⟹ XP_063118287

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	103,223,361 - 103,267,822 (+)	NCBI

RefSeq Acc Id:

XM_063262218 ⟹ XP_063118288

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	103,223,347 - 103,262,010 (+)	NCBI

RefSeq Acc Id:

XM_063262219 ⟹ XP_063118289

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	103,223,347 - 103,262,010 (+)	NCBI

RefSeq Acc Id:

XM_063262220 ⟹ XP_063118290

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	103,223,351 - 103,262,010 (+)	NCBI

RefSeq Acc Id:

XM_063262221 ⟹ XP_063118291

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	103,223,347 - 103,262,010 (+)	NCBI

RefSeq Acc Id:

XM_063262222 ⟹ XP_063118292

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	103,238,915 - 103,264,648 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001017469	(Get FASTA)	NCBI Sequence Viewer
	NP_001420975	(Get FASTA)	NCBI Sequence Viewer
	NP_001420977	(Get FASTA)	NCBI Sequence Viewer
	NP_001420978	(Get FASTA)	NCBI Sequence Viewer
	NP_001420979	(Get FASTA)	NCBI Sequence Viewer
	NP_001420980	(Get FASTA)	NCBI Sequence Viewer
	NP_001420985	(Get FASTA)	NCBI Sequence Viewer
	NP_001420988	(Get FASTA)	NCBI Sequence Viewer
	NP_001420989	(Get FASTA)	NCBI Sequence Viewer
	NP_001420990	(Get FASTA)	NCBI Sequence Viewer
	NP_001420991	(Get FASTA)	NCBI Sequence Viewer
	NP_001420992	(Get FASTA)	NCBI Sequence Viewer
	NP_001420993	(Get FASTA)	NCBI Sequence Viewer
	NP_001420994	(Get FASTA)	NCBI Sequence Viewer
	NP_001420995	(Get FASTA)	NCBI Sequence Viewer
	NP_001420996	(Get FASTA)	NCBI Sequence Viewer
	NP_001420997	(Get FASTA)	NCBI Sequence Viewer
	XP_017449742	(Get FASTA)	NCBI Sequence Viewer
	XP_017449743	(Get FASTA)	NCBI Sequence Viewer
	XP_017449744	(Get FASTA)	NCBI Sequence Viewer
	XP_017449746	(Get FASTA)	NCBI Sequence Viewer
	XP_017449747	(Get FASTA)	NCBI Sequence Viewer
	XP_017449748	(Get FASTA)	NCBI Sequence Viewer
	XP_038968567	(Get FASTA)	NCBI Sequence Viewer
	XP_063118256	(Get FASTA)	NCBI Sequence Viewer
	XP_063118257	(Get FASTA)	NCBI Sequence Viewer
	XP_063118258	(Get FASTA)	NCBI Sequence Viewer
	XP_063118259	(Get FASTA)	NCBI Sequence Viewer
	XP_063118260	(Get FASTA)	NCBI Sequence Viewer
	XP_063118261	(Get FASTA)	NCBI Sequence Viewer
	XP_063118262	(Get FASTA)	NCBI Sequence Viewer
	XP_063118263	(Get FASTA)	NCBI Sequence Viewer
	XP_063118264	(Get FASTA)	NCBI Sequence Viewer
	XP_063118265	(Get FASTA)	NCBI Sequence Viewer
	XP_063118266	(Get FASTA)	NCBI Sequence Viewer
	XP_063118267	(Get FASTA)	NCBI Sequence Viewer
	XP_063118268	(Get FASTA)	NCBI Sequence Viewer
	XP_063118269	(Get FASTA)	NCBI Sequence Viewer
	XP_063118270	(Get FASTA)	NCBI Sequence Viewer
	XP_063118271	(Get FASTA)	NCBI Sequence Viewer
	XP_063118272	(Get FASTA)	NCBI Sequence Viewer
	XP_063118273	(Get FASTA)	NCBI Sequence Viewer
	XP_063118274	(Get FASTA)	NCBI Sequence Viewer
	XP_063118275	(Get FASTA)	NCBI Sequence Viewer
	XP_063118276	(Get FASTA)	NCBI Sequence Viewer
	XP_063118277	(Get FASTA)	NCBI Sequence Viewer
	XP_063118278	(Get FASTA)	NCBI Sequence Viewer
	XP_063118279	(Get FASTA)	NCBI Sequence Viewer
	XP_063118280	(Get FASTA)	NCBI Sequence Viewer
	XP_063118281	(Get FASTA)	NCBI Sequence Viewer
	XP_063118282	(Get FASTA)	NCBI Sequence Viewer
	XP_063118283	(Get FASTA)	NCBI Sequence Viewer
	XP_063118284	(Get FASTA)	NCBI Sequence Viewer
	XP_063118285	(Get FASTA)	NCBI Sequence Viewer
	XP_063118286	(Get FASTA)	NCBI Sequence Viewer
	XP_063118287	(Get FASTA)	NCBI Sequence Viewer
	XP_063118288	(Get FASTA)	NCBI Sequence Viewer
	XP_063118289	(Get FASTA)	NCBI Sequence Viewer
	XP_063118290	(Get FASTA)	NCBI Sequence Viewer
	XP_063118291	(Get FASTA)	NCBI Sequence Viewer
	XP_063118292	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH78980	(Get FASTA)	NCBI Sequence Viewer
	EDM03695	(Get FASTA)	NCBI Sequence Viewer
	EDM03696	(Get FASTA)	NCBI Sequence Viewer
	EDM03697	(Get FASTA)	NCBI Sequence Viewer
	EDM03698	(Get FASTA)	NCBI Sequence Viewer
	EDM03699	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000030883
	ENSRNOP00000030883.2
	ENSRNOP00000083630
	ENSRNOP00000083630.1
	ENSRNOP00000088945
	ENSRNOP00000088945.2
	ENSRNOP00000103730
	ENSRNOP00000103730.1
	ENSRNOP00000107809
	ENSRNOP00000107809.1
	ENSRNOP00000110801
	ENSRNOP00000110801.1
	ENSRNOP00000111374
	ENSRNOP00000111374.1
	ENSRNOP00000112689
	ENSRNOP00000112689.1

RefSeq Acc Id:

NP_001017469 ⟸ NM_001017469

- UniProtKB:

Q6AYN1 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MMKKNKSKSKKLVNKQDALCIPHYYRLGHLKNILDGGEYAPYVSPPILESNFIQVNRRGESIYL
HNRANWVTVGICSSNHVFKTPNMMLLAHLTTEARKEQEPLFKTILKSSSPGNLVLTRFIPLQFV
TISVHSAKNMRLKVKLINGRSYYLQLCAPMYKQDIIFSQWVDLIPLLNQEKAKTTQVSEISSLS
EITNSTDITGSLDITDITALPELQTMCSKTQRCPCNIMESEDFSEYTDATDVTDVTDVLENEVT
DVQDIKIVTEVTEVSEVQISTNVSGVKIVFENDDIIKNKQEEKDNNLKHRSLRDTKTKNDYRDS
PKHVSISNRTLALEDEETFQTTLTPVKSKEDICKEIYDETSEEKMISLQNTHLKATESRSKHST
LERLFRDHLQTLPSVRSQLTSQFPESNLLGVNYSKMSSTGGSTYGSPRPRPPHLYGVIH

hide sequence

RefSeq Acc Id:

XP_017449743 ⟸ XM_017594254

- Peptide Label:

isoform X2

- Sequence:

show sequence

MMKKNKSKSKKLVNKQDALCIPHYYRLGHLKNILDGGEYAPYVSPPILESNFIQVNRRGESIYL
HNRANWVTVGICSSNHVFKTPNMMLLAHLTTEARKEQEPLFKTILKSSSPGNLVLTRFIPLQFV
TISVHSAKNMRLKVKLINGRSYYLQLCAPMYKQDIIFSQWVDLIPLLNQEKAKTTQVSEISSLS
EITNSTDITGSLDITDITALPELQTMCSKTQRCPCNIMESEDFSEYTDATDVTDVTDVLENEVT
DVQDIKIVTEVTEVSEVQISTNVSGVKIVFENDDIIKNKQEEKDNNLKHRSLRDTKTKNDYRDS
PKHVSISNRTLALEDEETFQTTLTPVKSKEDICKEIYDETSEEKMISLQNTHLKATESRSVQTT
ILKTKPNSEKGNLCGRRTAKPLCGRNKG

hide sequence

RefSeq Acc Id:

XP_017449744 ⟸ XM_017594255

- Peptide Label:

isoform X4

- Sequence:

show sequence

MMKKNKSKSKKLVNKQDALCIPHYYRLGHLKNILDGGEYAPYVSPPILESNFIQVNRRGESIYL
HNRANWVTVGICSSNHVFKTPNMMLLAHLTTEARKEQEPLFKTILKSSSPGNLVLTRFIPLQFV
TISVHSAKNMRLKVKLINGRSYYLQLCAPMYKQDIIFSQWVDLIPLLNQEKAKTTQVSEISSLS
EITNSTDITGSLDITDITALPELQTMCSKTQRCPCNIMESEDFSEYTDATDVTDVTDVLENEVT
DVQDIKIVTEVTEVSEVQISTNVSGVKIVFENDDIIKNKQEEKDNNLKHRSLRDTKTKNDYRDS
PKHVSISNRTLALEDEETFQTTLTPVKSKEDICKEIYDETSEEKMISLQNTHLKATESRSTRTD
SDTSDGELKLGRYLLRD

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RefSeq Acc Id:

XP_017449748 ⟸ XM_017594259

- Peptide Label:

isoform X7

- Sequence:

show sequence

MMKKNKSKSKKLVNKQDALCIPHYYRLGHLKNILDGGEYAPYVSPPILESNFIQVNRRGESIYL
HNRANWVTVGICSSNHVFKTPNMMLLAHLTTEARKEQEPLFKTILKSSSPGNLVLTRFIPLQFV
TISVHSAKNMRLKVKLINGRSYYLQLCAPMYKQDIIFSQWVDLIPLLNQEKAKTTQVSEISSLS
EITNSTDITGSLDITDITALPELQTMCSKTQRCPCNIMESEDFSEYTDATDVTDVTDVLENEVT
DVQDIKIVTEVTEVSEVQISTNVSGVKIVFENDDIIKNKQEEKDNNLKHRSLRDTKTKNDYRDS
PKHVSISNRTLALEDEETFQTTLTPVKSKEDICKEIYDETSEEKMISLQNTHLKATESRW

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RefSeq Acc Id:

XP_017449746 ⟸ XM_017594257

- Peptide Label:

isoform X5

- Sequence:

show sequence

MMKKNKSKSKKLVNKQDALCIPHYYRLGHLKNILDGGEYAPYVSPPILESNFIQVNRRGESIYL
HNRANWVTVGICSSNHVFKTPNMMLLAHLTTEARKEQEPLFKTILKSSSPGNLVLTRFIPLQFV
TISVHSAKNMRLKVKLINGRSYYLQLCAPMYKQDIIFSQWVDLIPLLNQEKAKTTQVSEISSLS
EITNSTDITGSLDITDITALPELQTMCSKTQRCPCNIMESEDFSEYTDATDVTDVTDVLENEVT
DVQDIKIVTEVTEVSEVQISTNVSGVKIVFENDDIIKNKQEEKDNNLKHRSLRDTKTKNDYRDS
PKHVSISNRTLALEDEETFQTTLTPVKSKEDICKEIYDETSEEKMISLQNTHLKATESRSTRTD
SDTSDQYKLLY

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RefSeq Acc Id:	XP_017449747 ⟸ XM_017594258
- Peptide Label:	isoform X6
- UniProtKB:	A6HCE4 (UniProtKB/TrEMBL)
- Sequence:	show sequence MMKKNKSKSKKLVNKQDALCIPHYYRLGHLKNILDGGEYAPYVSPPILESNFIQVNRRGESIYL HNRANWVTVGICSSNHVFKTPNMMLLAHLTTEARKEQEPLFKTILKSSSPGNLVLTRFIPLQFV TISVHSAKNMRLKVKLINGRSYYLQLCAPMYKQDIIFSQWVDLIPLLNQEKAKTTQVSEISSLS EITNSTDITGSLDITDITALPELQTMCSKTQRCPCNIMESEDFSEYTDATDVTDVTDVLENEVT DVQDIKIVTEVTEVSEVQISTNVSGVKIVFENDDIIKNKQEEKDNNLKHRSLRDTKTKNDYRDS PKHVSISNRTLALEDEETFQTTLTPVKSKEDICKEIYDETSEEKMISLQNTHLKATESRLI hide sequence

RefSeq Acc Id:

XP_017449742 ⟸ XM_017594253

- Peptide Label:

isoform X1

- Sequence:

show sequence

MMKKNKSKSKKLVNKQDALCIPHYYRLGHLKNILDGGEYAPYVSPPILESNFIQVNRRGESIYL
HNRANWVTVGICSSNHVFKTPNMMLLAHLTTEARKEQEPLFKTILKSSSPGNLVLTRFIPLQFV
TISVHSAKNMRLKVKLINGRSYYLQLCAPMYKQDIIFSQWVDLIPLLNQEKAKTTQVSEISSLS
EITNSTDITGSLDITDITALPELQTMCSKTQRCPCNIMESEDFSEYTDATDVTDVTDVLENEVT
DVQDIKIVTEVTEVSEVQISTNVSGVKIVFENDDIIKNKQEEKDNNLKHRSLRDTKTKNDYRDS
PKHVSISNRTLALEDEETFQTTLTPVKSKEDICKEIYDETSEEKMISLQNTHLKATESRSTRTD
SDTSDLNTPPWRDSSETIFRPFQVCGHS

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Ensembl Acc Id:

ENSRNOP00000030883 ⟸ ENSRNOT00000029888

RefSeq Acc Id:	XP_038968567 ⟸ XM_039112639
- Peptide Label:	isoform X3

Ensembl Acc Id:

ENSRNOP00000083630 ⟸ ENSRNOT00000116129

Ensembl Acc Id:

ENSRNOP00000088945 ⟸ ENSRNOT00000098828

RefSeq Acc Id:	XP_063118274 ⟸ XM_063262204
- Peptide Label:	isoform X4

RefSeq Acc Id:	XP_063118282 ⟸ XM_063262212
- Peptide Label:	isoform X7

RefSeq Acc Id:	XP_063118275 ⟸ XM_063262205
- Peptide Label:	isoform X4
- UniProtKB:	A0A8I5ZVQ0 (UniProtKB/TrEMBL), A6HCE0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063118284 ⟸ XM_063262214
- Peptide Label:	isoform X7
- UniProtKB:	A0A8I6GHM2 (UniProtKB/TrEMBL), A6HCE1 (UniProtKB/TrEMBL), A6HCE4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063118276 ⟸ XM_063262206
- Peptide Label:	isoform X4
- UniProtKB:	A0A8I5ZVQ0 (UniProtKB/TrEMBL), A6HCE0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063118283 ⟸ XM_063262213
- Peptide Label:	isoform X7

RefSeq Acc Id:	XP_063118278 ⟸ XM_063262208
- Peptide Label:	isoform X5
- UniProtKB:	A6HCE0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063118265 ⟸ XM_063262195
- Peptide Label:	isoform X2
- UniProtKB:	A6HCE4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063118269 ⟸ XM_063262199
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_063118281 ⟸ XM_063262211
- Peptide Label:	isoform X6

RefSeq Acc Id:	XP_063118271 ⟸ XM_063262201
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_063118259 ⟸ XM_063262189
- Peptide Label:	isoform X1
- UniProtKB:	A6HCE0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063118288 ⟸ XM_063262218
- Peptide Label:	isoform X8

RefSeq Acc Id:	XP_063118291 ⟸ XM_063262221
- Peptide Label:	isoform X10

RefSeq Acc Id:	XP_063118261 ⟸ XM_063262191
- Peptide Label:	isoform X1
- UniProtKB:	A6HCE0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063118260 ⟸ XM_063262190
- Peptide Label:	isoform X1
- UniProtKB:	A6HCE0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063118289 ⟸ XM_063262219
- Peptide Label:	isoform X8

RefSeq Acc Id:	XP_063118290 ⟸ XM_063262220
- Peptide Label:	isoform X9

RefSeq Acc Id:	XP_063118277 ⟸ XM_063262207
- Peptide Label:	isoform X4
- UniProtKB:	A0A8I5ZVQ0 (UniProtKB/TrEMBL), A6HCE0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063118257 ⟸ XM_063262187
- Peptide Label:	isoform X2
- UniProtKB:	A6HCE4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063118270 ⟸ XM_063262200
- Peptide Label:	isoform X3
- UniProtKB:	A6HCE2 (UniProtKB/TrEMBL), A6HCE0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063118262 ⟸ XM_063262192
- Peptide Label:	isoform X1
- UniProtKB:	A6HCE0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063118256 ⟸ XM_063262186
- Peptide Label:	isoform X1
- UniProtKB:	A6HCE0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063118263 ⟸ XM_063262193
- Peptide Label:	isoform X1
- UniProtKB:	A6HCE0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063118285 ⟸ XM_063262215
- Peptide Label:	isoform X7
- UniProtKB:	A0A8I6GHM2 (UniProtKB/TrEMBL), A6HCE1 (UniProtKB/TrEMBL), A6HCE4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063118272 ⟸ XM_063262202
- Peptide Label:	isoform X4
- UniProtKB:	A0A8I5ZVQ0 (UniProtKB/TrEMBL), A6HCE0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063118279 ⟸ XM_063262209
- Peptide Label:	isoform X7

RefSeq Acc Id:	XP_063118286 ⟸ XM_063262216
- Peptide Label:	isoform X7
- UniProtKB:	A0A8I6GHM2 (UniProtKB/TrEMBL), A6HCE1 (UniProtKB/TrEMBL), A6HCE4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063118267 ⟸ XM_063262197
- Peptide Label:	isoform X3
- UniProtKB:	A6HCE2 (UniProtKB/TrEMBL), A6HCE0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063118266 ⟸ XM_063262196
- Peptide Label:	isoform X1
- UniProtKB:	A6HCE0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063118264 ⟸ XM_063262194
- Peptide Label:	isoform X1
- UniProtKB:	A6HCE0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063118268 ⟸ XM_063262198
- Peptide Label:	isoform X3
- UniProtKB:	A6HCE2 (UniProtKB/TrEMBL), A6HCE0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063118258 ⟸ XM_063262188
- Peptide Label:	isoform X1
- UniProtKB:	A6HCE0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063118273 ⟸ XM_063262203
- Peptide Label:	isoform X4
- UniProtKB:	A0A8I5ZVQ0 (UniProtKB/TrEMBL), A6HCE0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063118287 ⟸ XM_063262217
- Peptide Label:	isoform X7
- UniProtKB:	A0A8I6GHM2 (UniProtKB/TrEMBL), A6HCE1 (UniProtKB/TrEMBL), A6HCE4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063118280 ⟸ XM_063262210
- Peptide Label:	isoform X7

RefSeq Acc Id:	XP_063118292 ⟸ XM_063262222
- Peptide Label:	isoform X11

Ensembl Acc Id:

ENSRNOP00000112689 ⟸ ENSRNOT00000149699

Ensembl Acc Id:

ENSRNOP00000111374 ⟸ ENSRNOT00000161205

Ensembl Acc Id:

ENSRNOP00000107809 ⟸ ENSRNOT00000169901

Ensembl Acc Id:

ENSRNOP00000110801 ⟸ ENSRNOT00000171111

Ensembl Acc Id:

ENSRNOP00000103730 ⟸ ENSRNOT00000172084

Protein Domains

Golgi associated RAB2 interactor protein-like Rab2B-

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q6AYN1-F1-model_v2	AlphaFold	Q6AYN1	1-443	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13694686

Promoter ID:

EPDNEW_R5210

Type:

initiation region

Name:

Fam71d_1

Description:

family with sequence similarity 71, member D

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	6	101,865,855 - 101,865,915	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1564393	AgrOrtholog
BioCyc Gene	G2FUF-36990	BioCyc
Ensembl Genes	ENSRNOG00000028351	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000029888	ENTREZGENE
	ENSRNOT00000029888.4	UniProtKB/TrEMBL
	ENSRNOT00000098828	ENTREZGENE
	ENSRNOT00000098828.2	UniProtKB/TrEMBL
	ENSRNOT00000116129	ENTREZGENE
	ENSRNOT00000116129.2	UniProtKB/TrEMBL
	ENSRNOT00000149699	ENTREZGENE
	ENSRNOT00000149699.1	UniProtKB/TrEMBL
	ENSRNOT00000161205	ENTREZGENE
	ENSRNOT00000161205.1	UniProtKB/TrEMBL
	ENSRNOT00000169901	ENTREZGENE
	ENSRNOT00000169901.1	UniProtKB/TrEMBL
	ENSRNOT00000171111	ENTREZGENE
	ENSRNOT00000171111.1	UniProtKB/TrEMBL
	ENSRNOT00000172084	ENTREZGENE
	ENSRNOT00000172084.1	UniProtKB/TrEMBL
IMAGE_CLONE	IMAGE:7112035	IMAGE-MGC_LOAD
InterPro	DUF3699	UniProtKB/TrEMBL
KEGG Report	rno:366671	UniProtKB/TrEMBL
MGC_CLONE	MGC:93867	IMAGE-MGC_LOAD
NCBI Gene	366671	ENTREZGENE
PANTHER	PROTEIN FAM71D	UniProtKB/TrEMBL
	UNCHARACTERIZED	UniProtKB/TrEMBL
Pfam	DUF3699	UniProtKB/TrEMBL
PhenoGen	Garin2	PhenoGen
RatGTEx	ENSRNOG00000028351	RatGTEx
UniProt	A0A8I5ZVQ0	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6GHM2	ENTREZGENE, UniProtKB/TrEMBL
	A0ABK0LJK7_RAT	UniProtKB/TrEMBL
	A0ABK0LKF7_RAT	UniProtKB/TrEMBL
	A0ABK0LWT3_RAT	UniProtKB/TrEMBL
	A0ABK0M2L1_RAT	UniProtKB/TrEMBL
	A0ABK0M8T2_RAT	UniProtKB/TrEMBL
	A6HCE0	ENTREZGENE, UniProtKB/TrEMBL
	A6HCE1	ENTREZGENE, UniProtKB/TrEMBL
	A6HCE2	ENTREZGENE, UniProtKB/TrEMBL
	A6HCE4	ENTREZGENE, UniProtKB/TrEMBL
	Q6AYN1	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2021-12-02	Garin2	golgi associated RAB2 interactor family member 2	Fam71d	family with sequence similarity 71, member D	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-03-05	Fam71d	family with sequence similarity 71, member D	LOC366671	similar to RIKEN cDNA 4921509E07	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2006-02-09	LOC366671	similar to RIKEN cDNA 4921509E07			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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