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Gene: C5h8orf34 (similar to human chromosome 8 open reading frame 34) Rattus norvegicus

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Symbol:

C5h8orf34

Name:

similar to human chromosome 8 open reading frame 34

RGD ID:

1564053

Description:

Orthologous to human C8orf34 (chromosome 8 open reading frame 34); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,3,7,8-Tetrachlorodibenzofuran; bisphenol A.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

hypothetical protein LOC500390; LOC500390; RGD1564053; similar to hypothetical protein; uncharacterized protein C8orf34 homolog; uncharacterized protein LOC500390

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	C8orf34 (chromosome 8 open reading frame 34)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, Panther, Treefam
Mus musculus (house mouse):	A830018L16Rik (RIKEN cDNA A830018L16 gene)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	CUNH8orf34 (chromosome unknown C8orf34 homolog)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	C7H8orf34 (chromosome 7 C8orf34 homolog)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	C29H8orf34 (chromosome 29 C8orf34 homolog)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	CUNH8orf34 (chromosome unknown C8orf34 homolog)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	C4H8orf34 (chromosome 4 C8orf34 homolog)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	C8H8orf34 (chromosome 8 C8orf34 homolog)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	CUNH8orf34 (chromosome unknown C8orf34 homolog)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	C8orf34 (chromosome 8 open reading frame 34)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	A830018L16Rik (RIKEN cDNA A830018L16 gene)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	zgc:162928	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	c8orf34	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	c8orf34	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoFinder\|PANTHER)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	5	12,021,000 - 12,560,212 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	5	12,021,007 - 12,559,772 (-)	Ensembl				GRCr8
mRatBN7.2	5	7,237,968 - 7,777,119 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	5	7,238,853 - 7,776,769 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	5	9,400,673 - 9,929,803 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	5	11,039,572 - 11,568,714 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	5	10,735,309 - 11,264,457 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	5	6,935,078 - 7,465,665 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	5	6,936,016 - 7,465,510 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	5	11,756,424 - 12,289,040 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	5	6,480,880 - 7,044,373 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	5	6,808,288 - 7,330,098 (-)	NCBI		Celera
Cytogenetic Map	5	q11	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

2,3,7,8-tetrachlorodibenzodioxine (EXP)

2,3,7,8-Tetrachlorodibenzofuran (EXP)

3-isobutyl-1-methyl-7H-xanthine (ISO)

4,4'-sulfonyldiphenol (ISO)

aflatoxin B1 (ISO)

belinostat (ISO)

benzo[a]pyrene (ISO)

benzo[e]pyrene (ISO)

bisphenol A (EXP,ISO)

cadmium atom (ISO)

cadmium dichloride (ISO)

calcitriol (ISO)

dexamethasone (ISO)

dorsomorphin (ISO)

entinostat (ISO)

fulvestrant (ISO)

indometacin (ISO)

malathion (ISO)

methapyrilene (ISO)

nickel atom (ISO)

panobinostat (ISO)

SB 431542 (ISO)

trichloroethene (EXP)

trichostatin A (ISO)

valproic acid (ISO)

vorinostat (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
2.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:8889548	PMID:12477932

Genomics

Comparative Map Data

C5h8orf34
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	5	12,021,000 - 12,560,212 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	5	12,021,007 - 12,559,772 (-)	Ensembl				GRCr8
mRatBN7.2	5	7,237,968 - 7,777,119 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	5	7,238,853 - 7,776,769 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	5	9,400,673 - 9,929,803 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	5	11,039,572 - 11,568,714 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	5	10,735,309 - 11,264,457 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	5	6,935,078 - 7,465,665 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	5	6,936,016 - 7,465,510 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	5	11,756,424 - 12,289,040 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	5	6,480,880 - 7,044,373 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	5	6,808,288 - 7,330,098 (-)	NCBI		Celera
Cytogenetic Map	5	q11	NCBI

C8orf34
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	8	68,330,373 - 68,819,023 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	8	68,330,669 - 68,819,023 (+)	Ensembl			hg38	GRCh38
GRCh37	8	69,242,608 - 69,731,258 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	8	69,512,702 - 69,893,811 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Celera	8	65,343,493 - 65,724,632 (+)	NCBI		Celera
Cytogenetic Map	8	q13.2	NCBI
HuRef	8	64,735,152 - 65,223,364 (+)	NCBI		HuRef
CHM1_1	8	69,298,400 - 69,786,652 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	8	68,757,073 - 69,245,732 (+)	NCBI		T2T-CHM13v2.0

A830018L16Rik
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	1	11,484,121 - 12,046,126 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	1	11,484,329 - 12,046,125 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	1	11,413,615 - 11,975,902 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	1	11,414,105 - 11,975,901 (+)	Ensembl			mm10	GRCm38
MGSCv37	1	11,404,193 - 11,965,982 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	1	11,399,326 - 11,961,115 (+)	NCBI		MGSCv36	mm8
Celera	1	11,391,142 - 11,924,683 (+)	NCBI		Celera
Cytogenetic Map	1	A2	NCBI
cM Map	1	2.57	NCBI

CUNH8orf34
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955444	10,700,981 - 11,071,442 (-)	Ensembl
ChiLan1.0	NW_004955444	10,700,697 - 11,071,804 (-)	NCBI	ChiLan1.0	ChiLan1.0

C7H8orf34
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	7	84,062,196 - 84,547,669 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	8	59,704,177 - 60,189,522 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	8	64,867,411 - 65,352,819 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	8	66,527,512 - 67,010,472 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	8	66,528,232 - 67,009,695 (+)	Ensembl			panPan2	panpan1.1

C29H8orf34
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	29	17,817,923 - 18,221,414 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	29	17,817,952 - 18,197,607 (+)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	29	18,138,783 - 18,518,610 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	29	17,908,879 - 18,314,614 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	29	17,908,740 - 18,289,461 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	29	17,954,764 - 18,332,546 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	29	18,025,769 - 18,403,338 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	29	18,295,264 - 18,682,468 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

CUNH8orf34
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405303	68,890,443 - 69,397,432 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936496	5,499,033 - 5,894,847 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936496	5,498,146 - 5,894,828 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

C4H8orf34
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	4	66,275,904 - 66,636,960 (-)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	4	66,275,896 - 66,637,493 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	4	72,402,068 - 72,488,579 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

C8H8orf34
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	8	64,150,175 - 64,628,622 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	8	64,151,983 - 64,628,605 (+)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666039	76,868,892 - 77,349,898 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

CUNH8orf34
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624744	22,416,147 - 22,838,084 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Variants

Variants in C5h8orf34
5151 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	89
Count of miRNA genes:	77
Interacting mature miRNAs:	79
Transcripts:	ENSRNOT00000066254
Prediction methods:	Miranda, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
2312562	Pur18	Proteinuria QTL 18	2.6	0.001	urine total protein amount (VT:0000032)	urine total protein excretion rate (CMO:0000756)	5	6922282	37468560	Rat
1576314	Eutr1	Estrogen induced uterine response QTL 1			uterus integrity trait (VT:0010575)	pyometritis severity score (CMO:0002009)	5	6922282	81330203	Rat
8662454	Vetf3	Vascular elastic tissue fragility QTL 3	27.4		artery integrity trait (VT:0010639)	number of ruptures of the internal elastic lamina of the abdominal aorta and iliac arteries (CMO:0002562)	5	7065535	74335773	Rat
1300117	Hrtrt8	Heart rate QTL 8	3.49		heart pumping trait (VT:2000009)	heart rate (CMO:0000002)	5	8627230	52665523	Rat
1331756	Rf34	Renal function QTL 34	4.16275		kidney blood vessel physiology trait (VT:0100012)	absolute change in renal blood flow rate (CMO:0001168)	5	10019064	87027358	Rat
2313085	Bss59	Bone structure and strength QTL 59	2.9	0.0001	long bone metaphysis morphology trait (VT:0000133)	tibia midshaft total cross-sectional area (CMO:0001715)	5	8627230	53627230	Rat
1331771	Rf35	Renal function QTL 35	4.36965		kidney blood vessel physiology trait (VT:0100012)	absolute change in renal blood flow rate (CMO:0001168)	5	10019064	91770353	Rat

Markers in Region

D5Got1

Rat Assembly	Chr	Position (strand)	Source	JBrowse
GRCr8	5	12,550,491 - 12,550,688 (+)	Marker Load Pipeline
mRatBN7.2	5	7,767,486 - 7,767,685 (+)	MAPPER	mRatBN7.2
Rnor_6.0	5	7,456,385 - 7,456,581	NCBI	Rnor6.0
Rnor_5.0	5	12,279,760 - 12,279,956	UniSTS	Rnor5.0
RGSC_v3.4	5	7,217,029 - 7,217,225	UniSTS	RGSC3.4
RGSC_v3.4	5	7,217,028 - 7,217,225	RGD	RGSC3.4
RGSC_v3.4	5	7,035,091 - 7,035,288	RGD	RGSC3.4
RGSC_v3.4	5	7,035,092 - 7,035,288	UniSTS	RGSC3.4
Celera	5	7,320,820 - 7,321,016	UniSTS
RGSC_v3.1	5	7,217,028 - 7,217,225	RGD
Cytogenetic Map	5	q11	UniSTS

D5Got299

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	5	7,515,205 - 7,515,477 (+)	MAPPER	mRatBN7.2
Rnor_6.0	5	7,209,934 - 7,210,205	NCBI	Rnor6.0
Rnor_5.0	5	12,029,931 - 12,030,202	UniSTS	Rnor5.0
RGSC_v3.4	5	6,763,327 - 6,763,598	UniSTS	RGSC3.4
Celera	5	7,078,277 - 7,078,554	UniSTS
Cytogenetic Map	5	q11	UniSTS

BF386244

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	5	7,337,408 - 7,337,562 (+)	MAPPER	mRatBN7.2
Rnor_6.0	5	7,036,228 - 7,036,381	NCBI	Rnor6.0
Rnor_5.0	5	11,856,456 - 11,856,609	UniSTS	Rnor5.0
RGSC_v3.4	5	6,580,254 - 6,580,407	UniSTS	RGSC3.4
Celera	5	6,907,853 - 6,908,006	UniSTS
RH 3.4 Map	5	0.0	UniSTS
Cytogenetic Map	5	q11	UniSTS

RH135096

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	5	7,535,387 - 7,535,569 (+)	MAPPER	mRatBN7.2
Rnor_6.0	5	7,230,226 - 7,230,407	NCBI	Rnor6.0
Rnor_5.0	5	12,050,223 - 12,050,404	UniSTS	Rnor5.0
RGSC_v3.4	5	6,783,532 - 6,783,713	UniSTS	RGSC3.4
Celera	5	7,098,636 - 7,098,817	UniSTS
RH 3.4 Map	5	0.0	UniSTS
Cytogenetic Map	5	q11	UniSTS

AW529472

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	5	7,533,935 - 7,534,123 (+)	MAPPER	mRatBN7.2
Rnor_6.0	5	7,228,774 - 7,228,961	NCBI	Rnor6.0
Rnor_5.0	5	12,048,771 - 12,048,958	UniSTS	Rnor5.0
RGSC_v3.4	5	6,782,080 - 6,782,267	UniSTS	RGSC3.4
Celera	5	7,097,184 - 7,097,371	UniSTS
RH 3.4 Map	5	0.0	UniSTS
Cytogenetic Map	5	q11	UniSTS

AU049575

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	5	7,561,750 - 7,561,967 (+)	MAPPER	mRatBN7.2
Rnor_6.0	5	7,256,507 - 7,256,723	NCBI	Rnor6.0
Rnor_5.0	5	12,076,504 - 12,076,720	UniSTS	Rnor5.0
RGSC_v3.4	5	6,809,894 - 6,810,110	UniSTS	RGSC3.4
Celera	5	7,125,004 - 7,125,220	UniSTS
Cytogenetic Map	5	q11	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
10	5	37	137	86	87	59	28	59	2	244	90	9	114	81	91	28	8	8

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001109259	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001195648	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017593561	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017593562	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017593563	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017593564	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017593565	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017593566	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039110519	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039110520	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039110521	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063288168	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	BC111074	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BE108121	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473984	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000005	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000066254 ⟹ ENSRNOP00000060947

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	5	12,021,007 - 12,559,772 (-)	Ensembl
mRatBN7.2 Ensembl	5	7,238,853 - 7,776,769 (-)	Ensembl
Rnor_6.0 Ensembl	5	6,936,016 - 7,465,510 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000096147 ⟹ ENSRNOP00000078997

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	5	12,021,007 - 12,559,772 (-)	Ensembl
mRatBN7.2 Ensembl	5	7,238,853 - 7,776,769 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000164316 ⟹ ENSRNOP00000111368

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	5	12,021,007 - 12,559,772 (-)	Ensembl

RefSeq Acc Id:

NM_001109259 ⟹ NP_001102729

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	12,021,000 - 12,559,772 (-)	NCBI
mRatBN7.2	5	7,237,968 - 7,776,769 (-)	NCBI
Rnor_6.0	5	6,937,183 - 7,465,665 (-)	NCBI
Rnor_5.0	5	11,756,424 - 12,289,040 (-)	NCBI
RGSC_v3.4	5	6,480,880 - 7,044,373 (-)	RGD
Celera	5	6,808,288 - 7,330,098 (-)	RGD

Sequence:

show sequence

GCAGCTTGGAGCTGGGCTCACACCGTGGCGCGCTCTGGGCGGCTCCGCGCTGTCGCCCCTGTGG
CTCGCGCTGTCCCTGGCTCGGCTCGTGGAGACGCTGCACAGACACTAGCCTTTGGCCACCGGCT
CCTGCTGCTGCTGCCGCCCAGAGGACAGACCAGCCTCTGCCCGCGATTTCCCCTTGGCAGCGGC
GCTGCAGAGAGCGGGTGGGCGCGAGCTGCAGGATGCGAGGTAGTTCTCCCCTCACCTCGGAGTT
GTCTGAGTTGGCAGAGCCTCGCCCGGGTTCCTTGAGTCCTGCTCCCTTCGGGTTCGCTCCTCAC
CGGTTTGCTAGCCATCGCTGTGCCAGGAAGCCCAGGCAACCCAGCTCCTGTTGTGGGTCCATCC
TGGGCCAGAGGAGGGCTGTCCCCAGCCAAGGTGCACTGTCTTCTCTCTGCTGACCCATCTGTTT
TCCCATGGCGTCTCGTCAACAGACCCGAATCCAGGCTTACCTGGAGAAAAACAAGATCGGTCCT
CTGTTTGAGGAATTAATGACCAAGTTAATAACTGAGACACCTGACCAACCAATCCCATTTCTCA
TTGACCATCTTCAATCTAAACAAGGAAACCGAGGACAACTGCAAAGAACTTTGTCAGGGTCAGC
GGCTCTCTGGGCAGAAAGCGAATCATCAGAACCCAAAGGAACAAGAAGGGATTTGAGAAGCTAT
GATAAACCTTGGCAGATGAATGCAAAGAAGCCTAAAAAATCAAAAAGTGACCTGGCTGTTTCTA
ATATTTCTCCTCCATCACCAGACTCCAAATCATTGCCAAGGTCAGTAGACCATCCTAAGTGGAC
CTGGCGGACTAAACCACAAAGCCGTGATTTTGATGAATTGAACCACATCCTTCAAGAGAGCAAG
AAGCTGGGGAAAGCCCTTGAGAAACTCTCTCGAAGTATTGCGACATCAGATGAACTTGATAAGG
AAACAGTGGCTTTCAATTCCTCCCTTCTGAGACCTCGTGTGATTGGGGAATGGATCGGCAGAGC
AGAAAACGATGCCGATCCCCTCGCAGCTGAAATGCTGCAGCCGCCGGTCCCGCGGAGTAAGAAT
GACTCATGGGAAAGTGAAGACAGCAGCTCTAGTCCGGCGGGAAGCTTGAAGATGGAGCCCAAGA
CGAAGGGACTAAAGCAACAGCAGCAGCAGCATAAGAAACTCCTGGCTGCAATGCTCTCCCAGGA
TTCCTTCGAGTCCATCCACAGCCCCACGCCATCTGTAATAGAAGAAGACATTGACAATGAAGAC
GATGCAATGGAGTTGCTGGAAGATCTGGATGACTTAAGGATGGAGGGTGTAACCAGCCTGGTGC
TTTCGGGGAGCAAATTTAACCAAGGTCGTCCTGCTCACCCTGCCGAGCCACAGGCCAAAGTTAC
ACTGAACATCTGTTCAAGGTGTGCCAGGCTTCAAGGGGACAACATGATGGAAAGGACAGAAGAC
ACATTACAAGTATTTCCTTCTCCAGATGAGATAATCCCAGACTCATTGGATTCTTTACCTGGGA
CTGAAGAAACGCTGATGGAAGAAGGTGAAGATTTTGAGAAAACATCTAACTTAACAGAACCAGG
AGAAGCCTCCAGTGGAGGATACTCTCTGAAATCCTACATGGAAGAAGATGAGTCTTTGAAGCAA
CTGCAGGTTGTGCATCAGCCATGGCTTTTACCAAGTGACACAGAAAGTGATGGAATTGAAGCAG
AACAAGACAAACGTTCTGCTGATCTTCTCTGTGTGCCATGCTCTTCCTGCCCTACCCTGGTCTA
CTCAGGTCTGTCTGTTAAACAGGCAAAGGAATTTACAAGTGGTCCTTAAGGAGACTGTAGCTGA
CTGAATCCTTACATATAGTCCTACTTTGATGTACTAAATGTAATCTCTAAGAAATGTTATTTTC
CTAATGTTAATAATAAACAAGCACTCTTGTAAGGAGGGTGTGCATCTATGTATAGTCCAAGGAC
ACTAATTCAGTCAATTGGCTATGGAATCTTATATCCTTTGATGTGGTCAGTGTCTTGGGTTTAT
GTTACTTTATATGTAGTTATTAAAATTAATGTTTGATATATTAAATGTTGGCTGACTCGAGTGC
TTAAAAATTTCTGGATTTTAATTTAGCTAAGGTTTTCTACCTCTATTTTTATAATAGTATCTCA
TATTTCGGGTTAATAAACATTACACTTGCCCACATGTGCCATGATATAGCATTAGTCCTTTGCA
GCAGTTAACTGCTTGGTGTTAGCCTCTGAGATGTAAACTCTTTGCATTGGGAAGAAATTTACCC
CCCACAACTGCCCCAATATCATTATATTACCATTCCTATTAAAATATATCAATATGTTACTTCA
GTAAAGCAAAATAATGAATAATGAAATGCATGCCCTCAGAGCACTTGCAAGGAAAATCACTGGT
TCATTTATCCAATTAGTGAGACACATTAAGACTTCCAGTTTAAATCTGATGTATGCCTCTTTTG
GAATGTGCTATGCATTGATTCTAAGTGAATGGATCTCAGTTAATCTATTATCTACATTTGCTAT
TTTTATCTTATTTGCCTTAAACGCAAGACTTTTTGGTGGGCTTTAATGAATTAATGCTAAGTTA
TACAACTCTGTATAGCTGTGAAAGAAACAATTGTTAAAGACTAAAACATAGCTAAGGAATAAAC
AAGCAATTTCTGACTTCTGAATTAAGTCATGTTTATAAATATAAATACTAAAATTATAAATGAT
GTAATAAATTTTCTTACATTATTGTTTTTGTATGATGAAACTAATTTTAGTAATAAGTATTTTT
ATAGAATGGAAATAAATTAAAGGTTTATGTATT

hide sequence

RefSeq Acc Id:

NM_001195648 ⟹ NP_001182577

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	12,316,938 - 12,559,772 (-)	NCBI
mRatBN7.2	5	7,533,908 - 7,776,769 (-)	NCBI

RefSeq Acc Id:

XM_017593561 ⟹ XP_017449050

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	12,021,756 - 12,560,212 (-)	NCBI
mRatBN7.2	5	7,237,970 - 7,777,115 (-)	NCBI
Rnor_6.0	5	6,935,079 - 7,465,234 (-)	NCBI

Sequence:

show sequence

TGCTGACCCATCTGTTTTCCCATGGCGTCTCGTCAACAGACCCGAATCCAGGCTTACCTGGAGA
AAAACAAGATCGGTCCTCTGTTTGAGGAATTAATGACCAAGTTAATAACTGAGACACCTGACCA
ACCAATCCCATTTCTCATTGACCATCTTCAATCTAAACAAGGAAACCGAGGACAACTGCAAAGA
ACTTTGTCAGGGTCAGCGGCTCTCTGGGCAGAAAGCGAATCATCAGAACCCAAAGGAACAAGAA
GGGATTTGAGAAGCTATGATAAACCTTGGCAGATGAATGCAAAGAAGCCTAAAAAATCAAAAAG
TGACCTGGCTGTTTCTAATATTTCTCCTCCATCACCAGACTCCAAATCATTGCCAAGGTCAGTA
GACCATCCTAAGTGGACCTGGCGGACTAAACCACAAAGCCGTGATTTTGATGAATTGAACCACA
TCCTTCAAGAGAGCAAGAAGCTGGGGAAAGCCCTTGAGAAACTCTCTCGAAGTATTGCGACATC
AGATGAACTTGATAAGGAAACAGTGGCTTTCAATTCCTCCCTTCTGAGACCTCGTGTGATTGGG
GAATGGATCGGCAGAGCAGAAAACGATGCCGATCCCCTCGCAGCTGAAATGCTGCAGCCGCCGG
TCCCGCGGAGTAAGAATGACTCATGGGAAAGTGAAGACAGCAGCTCTAGTCCGGCGGGAAGCTT
GAAGATGGAGCCCAAGACGAAGGGACTAAAGCAACAGCAGCAGCAGCATAAGAAACTCCTGGCT
GCAATGCTCTCCCAGGATTCCTTCGAGTCCATCCACAGCCCCACGCCATCTGTAATAGAAGAAG
ACATTGACAATGAAGACGATGCAATGGAGTTGCTGGAAGATCTGGATGACTTAAGGATGGAGGG
TGTAACCAGCCTGGTGCTTTCGGGGAGCAAATTTAACCAAGGTCGTCCTGCTCACCCTGCCGAG
CCACAGGCCAAAGTTACACTGAACATCTGTTCAAGGCTTCAAGGGGACAACATGATGGAAAGGA
CAGAAGACACATTACAAGTATTTCCTTCTCCAGATGAGATAATCCCAGACTCATTGGATTCTTT
ACCTGGGACTGAAGAAACGCTGATGGAAGAAGGTGAAGATTTTGAGAAAACATCTAACTTAACA
GAACCAGGAGAAGCCTCCAGTGGAGGATACTCTCTGAAATCCTACATGGAAGAAGATGAGTCTT
TGAAGCAACTGCAGGTTGTGCATCAGCCATGGCTTTTACCAAGTGACACAGAAAGTGATGGAAT
TGAAGCAGAACAAGACAAACGTTCTGCTGATCTTCTCTGTGTGCCATGCTCTTCCTGCCCTACC
CTGGTCTACTCAGGTCTGTCTGTTAAACAGGCAAAGGAATTTACAAGTGGTCCTTAAGGAGACT
GTAGCTGACTGAATCCTTACATATAGTCCTACTTTGATGTACTAAATGTAATCTCTAAGAAATG
TTATTTTCCTAATGTTAATAATAAACAAGCACTCTTGTAAGGAGGGTGTGCATCTATGTATAGT
CCAAGGACACTAATTCAGTCAATTGGCTATGGAATCTTATATCCTTTGATGTGGTCAGTGTCTT
GGGTTTATGTTACTTTATATGTAGTTATTAAAATTAATGTTTGATATATTAAATGTTGGCTGAC
TCGAGTGCTTAAAAATTTCTGGATTTTAATTTAGCTAAGGTTTTCTACCTCTATTTTTATAATA
GTATCTCATATTTCGGGTTAATAAACATTACACTTGCCCACATGTGCCATGATATAGCATTAGT
CCTTTGCAGCAGTTAACTGCTTGGTGTTAGCCTCTGAGATGTAAACTCTTTGCATTGGGAAGAA
ATTTACCCCCCACAACTGCCCCAATATCATTATATTACCATTCCTATTAAAATATATCAATATG
TTACTTCAGTAAAGCAAAATAATGAATAATGAAATGCATGCCCTCAGAGCACTTGCAAGGAAAA
TCACTGGTTCATTTATCCAATTAGTGAGACACATTAAGACTTCCAGTTTAAATCTGATGTATGC
CTCTTTTGGAATGTGCTATGCATTGATTCTAAGTGAATGGATCTCAGTTAATCTATTATCTACA
TTTGCTATTTTTATCTTATTTGCCTTAAACGCAAGACTTTTTGGTGGGCTTTAATGAATTAATG
CTAAGTTATACAACTCTGTATAGCTGTGAAAGAAACAATTGTTAAAGACTAAAACATAGCTAAG
GAATAAACAAGCAATTTCTGACTTCTGAATTAAGTCATGTTTATAAATATAAATACTAAAATTA
TAAATGATGTAATAAATTTTCTTACATTATTGTTTTTGTATGATGAAACTAATTTTAGTAATAA
GTATTTTTATAGAATGGAAATAAATTAAAGGTTTATGTATTAGTTGCTGTTCGTGGATGTGACA
ACATAACTGAGTACCATCAACCTCAAGGAGAAAGTTCTATTTTGGTCCATGTTTTGGGAGGTCT
CAGAGCATGGTCTCCTAGCTCCTTTGCCAATGGCCCATGGTGAAGCAGATTGACATGGCAGAAG
GACTATGTGATGTGAGATCACTCACTTCATGAAGGCCCAGAAGCATAGAAATTGAAAGTCAGGA
ACAACATATACATTTCAGTGACCTACTTCCCCCAGCCAGGTCTAGTCTTCTAGTTTCCATTACA
TCCTGATAACCCATTTAAGTGTCTATTCATCAACAGATTACCCCATTGATATAGGTCTGATAAC
TTAAGATCCAGTTACTTATCTATCTAAAACATTACTTCCGAAAATGTTATTGGGAACCCTACAA
GTCTTTGAGAGGGAACATTTTTCATCCAAATTCTAACAGCTCGTAACACAGTTTTTCAGCAGAA
AGCCAGAAGGAGGAAGATTAAATTCGTAGGATGAGAATATTTTTTATTTAACACTTTGCATCAT
GAAATGAAGTTTCAAAAAGATTCAACTGGTGATTTGAAATATTTTTCCTGTTAGAAATTTTTGG
TTTAAAATATGTCACAAATAATGTGTTTATCTGAGAGCCACACTCTCCTCCAGTAATGGCATAT
TGAAACTTGGCCTTCCATTTTCCAACGGACTTTTTCTGAAGACTACCAGTCTCCTGTCCCACAT
GAATATCAAAATCCACATGCACCAGGAAATAAGAATTGATGTTACTGCCTGCAGCATGGAAGAC
AGACCAAGTCATACACTAAGCGAAGGTAAGGACAGATGCCAATCAAGAACATCCTGCTGCAAAC
AAAAGGAGTCTAGTGTGAACCAAACCCAACTCCACTTTGTACAGAATGGGTGAGTGTTTCCAAG
GCAAAAGGGGTGAGTGGAATTGGTGAGGGCTGAGGGTTTGAGTACAGTCAGGGAAGTGGAAATT
TACAAAACCTATGAGTGGAAAAGGGTGGTTGTTCCAGGTAAAACTCACCTGGCTTTGCTCAAGA
ATTTTCCAAAGATACATGTCTAACCTATGACTGAGGTGAGTAGACAGTGTGGCTGGAACACGGC
TGTACAGATTTTTGCCAAGTGGTGCAGAAGTCAGTAACAACCAAGTCATCTGGTCAGTTGCAAG
TTACACCCCATCCAGAAGGGAAGGAAAACAGCAAAGAGCTTCGAGCTAGCAAATAGTATAATTT
TCTGCTTAGGAAGATAATTTCTGGGAACCATGAGGAAATTGGTCATAAAGGGAAAAAACTGGAT
GCCAGAGGAATGGCTAGGACACTTATAGAATCAGAGCTGGAGAGCAAACTGCACAGAAAGGGAG
GAATCTAGACAACTAATTGATGAAAGATGGGAAAGAAAGGTCACAGATAGTGTTGAGATTCTAG
CCAGGACACCTGGTGGTGAAATATCTTCAAACGATGTGTAGATGTTCACATGCTCAGTTCAGCT
CAGGATATAGCCAAGATTTTAAGTGTCATCGTTGTGAGGATGATCAAATAGAGCATAATAGAAG
TTGAGGCTATAGATGATGTCACCTGATGAGTCTGTGCAGTGGAAGGAGGACAGACATCCTAGGG
AAACACTGGGATTTAAGAGATTGTAAAAGTGATTTCAAGAGTCAACATTTTATAGACACTTCAC
AGAGTGGGTGGTCCACACTCTGTGTCTAGGAAGCAGAAGGTCAAAATCCTTGAACCTCTAGGTC
TCTGGTTCCAGTAAGCACAGCTGGATTTGAAGGAAGAGACAAGTGTGGCCACATTTGTGGAACC
TCTAGTAAGCAAGTTTAATGATGCTGTAGAAATTTCCTGTGCGTGAAATAAAAACAGCTGTATT
GAATAGAAACCTGCATGGAAGAAACTTAGCTTCTTCCTCATTTACGTCCTAAATAAGGCATTGC
AAACCTCAGGTCTTTTCAGTCAGTGTGTTCTGATGTTCTAACTTGACAGTGTCTATTTCTTTAT
TTTGTAGTAATGAAGGGGTTTAGGAATTAGTCCAGCTGGCTTATCTCAATGTAGTCTTTGTTTA
CCACCCCCTCTGTGTGTGTGTGTGTGTGTGTGT

hide sequence

RefSeq Acc Id:

XM_017593562 ⟹ XP_017449051

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	12,021,756 - 12,560,212 (-)	NCBI
mRatBN7.2	5	7,237,970 - 7,777,114 (-)	NCBI
Rnor_6.0	5	6,937,913 - 7,465,234 (-)	NCBI

Sequence:

show sequence

TGCTGACCCATCTGTTTTCCCATGGCGTCTCGTCAACAGACCCGAATCCAGGCTTACCTGGAGA
AAAACAAGATCGGTCCTCTGTTTGAGGAATTAATGACCAAGTTAATAACTGAGACACCTGACCA
ACCAATCCCATTTCTCATTGACCATCTTCAATCTAAACAAGGAAACCGAGGACAACTGCAAAGA
ACTTTGTCAGGGTCAGCGGCTCTCTGGGCAGAAAGCGAATCATCAGAACCCAAAGGAACAAGAA
GGGATTTGAGAAGCTATGATAAACCTTGGCAGATGAATGCAAAGAAGCCTAAAAAATCAAAAAG
TGACCTGGCTGTTTCTAATATTTCTCCTCCATCACCAGACTCCAAATCATTGCCAAGGTCAGTA
GACCATCCTAAGTGGACCTGGCGGACTAAACCACAAAGCCGTGATTTTGATGAATTGAACCACA
TCCTTCAAGAGAGCAAGAAGCTGGGGAAAGCCCTTGAGAAACTCTCTCGAAGTATTGCGACATC
AGATGAACTTGATAAGGAAACAGTGGCTTTCAATTCCTCCCTTCTGAGACCTCGTGTGATTGGG
GAATGGATCGGCAGAGCAGAAAACGATGCCGATCCCCTCGCAGCTGAAATGCTGCAGCCGCCGG
TCCCGCGGAGTAAGAATGACTCATGGGAAAGTGAAGACAGCAGCTCTAGTCCGGCGGGAAGCTT
GAAGATGGAGCCCAAGACGAAGGGACTAAAGCAACAGCAGCAGCAGCATAAGAAACTCCTGGCT
GCAATGCTCTCCCAGGATTCCTTCGAGTCCATCCACAGCCCCACGCCATCTGTAATAGAAGAAG
ACATTGACAATGAAGACGATGCAATGGAGTTGCTGGAAGATCTGGATGACTTAAGGATGGAGGG
TGTAACCAGCCTGGTGCTTTCGGGGAGCAAATTTAACCAAGGTCGTCCTGCTCACCCTGCCGAG
CCACAGGCCAAAGTTACACTGAACATCTGTTCAAGGTGTGCCAGGCTTCAAGGGGACAACATGA
TGGAAAGGACAGAAGACACATTACAAGTATTTCCTTCTCCAGATGAGATAATCCCAGACTCATT
GGATTCTTTACCTGGGACTGAAGAAACGCTGATGGAAGAAGGTGAAGATTTTGAGAAAACATCT
AACTTAACAGAACCAGATGAGTCTTTGAAGCAACTGCAGGTTGTGCATCAGCCATGGCTTTTAC
CAAGTGACACAGAAAGTGATGGAATTGAAGCAGAACAAGACAAACGTTCTGCTGATCTTCTCTG
TGTGCCATGCTCTTCCTGCCCTACCCTGGTCTACTCAGGTCTGTCTGTTAAACAGGCAAAGGAA
TTTACAAGTGGTCCTTAAGGAGACTGTAGCTGACTGAATCCTTACATATAGTCCTACTTTGATG
TACTAAATGTAATCTCTAAGAAATGTTATTTTCCTAATGTTAATAATAAACAAGCACTCTTGTA
AGGAGGGTGTGCATCTATGTATAGTCCAAGGACACTAATTCAGTCAATTGGCTATGGAATCTTA
TATCCTTTGATGTGGTCAGTGTCTTGGGTTTATGTTACTTTATATGTAGTTATTAAAATTAATG
TTTGATATATTAAATGTTGGCTGACTCGAGTGCTTAAAAA

hide sequence

RefSeq Acc Id:

XM_017593563 ⟹ XP_017449052

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	12,021,756 - 12,560,212 (-)	NCBI
mRatBN7.2	5	7,237,970 - 7,777,116 (-)	NCBI
Rnor_6.0	5	6,937,913 - 7,465,234 (-)	NCBI

Sequence:

show sequence

TGCTGACCCATCTGTTTTCCCATGGCGTCTCGTCAACAGACCCGAATCCAGGCTTACCTGGAGA
AAAACAAGATCGGTCCTCTGTTTGAGGAATTAATGACCAAGTTAATAACTGAGACACCTGACCA
ACCAATCCCATTTCTCATTGACCATCTTCAATCTAAACAAGGAAACCGAGGACAACTGCAAAGA
ACTTTGTCAGGGTCAGCGGCTCTCTGGGCAGAAAGCGAATCATCAGAACCCAAAGGAACAAGAA
GGGATTTGAGAAGCTATGATAAACCTTGGCAGATGAATGCAAAGAAGCCTAAAAAATCAAAAAG
TGACCTGGCTGTTTCTAATATTTCTCCTCCATCACCAGACTCCAAATCATTGCCAAGGTCAGTA
GACCATCCTAAGTGGACCTGGCGGACTAAACCACAAAGCCGTGATTTTGATGAATTGAACCACA
TCCTTCAAGAGAGCAAGAAGCTGGGGAAAGCCCTTGAGAAACTCTCTCGAAGTATTGCGACATC
AGATGAACTTGATAAGGAAACAGTGGCTTTCAATTCCTCCCTTCTGAGACCTCGTGTGATTGGG
GAATGGATCGGCAGAGCAGAAAACGATGCCGATCCCCTCGCAGCTGAAATGCTGCAGCCGCCGG
TCCCGCGGAGTAAGAATGACTCATGGGAAAGTGAAGACAGCAGCTCTAGTCCGGCGGGAAGCTT
GAAGATGGAGCCCAAGACGAAGGGACTAAAGCAACAGCAGCAGCAGCATAAGAAACTCCTGGCT
GCAATGCTCTCCCAGGATTCCTTCGAGTCCATCCACAGCCCCACGCCATCTGTAATAGAAGAAG
ACATTGACAATGAAGACGATGCAATGGAGTTGCTGGAAGATCTGGATGACTTAAGGATGGAGGG
TGTAACCAGCCTGGTGCTTTCGGGGAGCAAATTTAACCAAGGTCGTCCTGCTCACCCTGCCGAG
CCACAGGCCAAAGTTACACTGAACATCTGTTCAAGGCTTCAAGGGGACAACATGATGGAAAGGA
CAGAAGACACATTACAAGTATTTCCTTCTCCAGATGAGATAATCCCAGACTCATTGGATTCTTT
ACCTGGGACTGAAGAAACGCTGATGGAAGAAGGTGAAGATTTTGAGAAAACATCTAACTTAACA
GAACCAGATGAGTCTTTGAAGCAACTGCAGGTTGTGCATCAGCCATGGCTTTTACCAAGTGACA
CAGAAAGTGATGGAATTGAAGCAGAACAAGACAAACGTTCTGCTGATCTTCTCTGTGTGCCATG
CTCTTCCTGCCCTACCCTGGTCTACTCAGGTCTGTCTGTTAAACAGGCAAAGGAATTTACAAGT
GGTCCTTAAGGAGACTGTAGCTGACTGAATCCTTACATATAGTCCTACTTTGATGTACTAAATG
TAATCTCTAAGAAATGTTATTTTCCTAATGTTAATAATAAACAAGCACTCTTGTAAGGAGGGTG
TGCATCTATGTATAGTCCAAGGACACTAATTCAGTCAATTGGCTATGGAATCTTATATCCTTTG
ATGTGGTCAGTGTCTTGGGTTTATGTTACTTTATATGTAGTTATTAAAATTAATGTTTGATATA
TTAAATGTTGGCTGACTCGAGTGCTTAAAAA

hide sequence

RefSeq Acc Id:

XM_017593564 ⟹ XP_017449053

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	12,021,756 - 12,560,212 (-)	NCBI
mRatBN7.2	5	7,237,970 - 7,777,119 (-)	NCBI
Rnor_6.0	5	6,935,078 - 7,465,234 (-)	NCBI

Sequence:

show sequence

TGCTGACCCATCTGTTTTCCCATGGCGTCTCGTCAACAGACCCGAATCCAGGCTTACCTGGAGA
AAAACAAGATCGGTCCTCTGTTTGAGGAATTAATGACCAAGTTAATAACTGAGACACCTGACCA
ACCAATCCCATTTCTCATTGACCATCTTCAATCTAAACAAGGAAACCGAGGACAACTGCAAAGA
ACTTTGTCAGGGTCAGCGGCTCTCTGGGCAGAAAGCGAATCATCAGAACCCAAAGGAACAAGAA
GGGATTTGAGAAGCTATGATAAACCTTGGCAGATGAATGCAAAGAAGCCTAAAAAATCAAAAAG
TGACCTGGCTGTTTCTAATATTTCTCCTCCATCACCAGACTCCAAATCATGTATTGCGACATCA
GATGAACTTGATAAGGAAACAGTGGCTTTCAATTCCTCCCTTCTGAGACCTCGTGTGATTGGGG
AATGGATCGGCAGAGCAGAAAACGATGCCGATCCCCTCGCAGCTGAAATGCTGCAGCCGCCGGT
CCCGCGGAGTAAGAATGACTCATGGGAAAGTGAAGACAGCAGCTCTAGTCCGGCGGGAAGCTTG
AAGATGGAGCCCAAGACGAAGGGACTAAAGCAACAGCAGCAGCAGCATAAGAAACTCCTGGCTG
CAATGCTCTCCCAGGATTCCTTCGAGTCCATCCACAGCCCCACGCCATCTGTAATAGAAGAAGA
CATTGACAATGAAGACGATGCAATGGAGTTGCTGGAAGATCTGGATGACTTAAGGATGGAGGGT
GTAACCAGCCTGGTGCTTTCGGGGAGCAAATTTAACCAAGGTCGTCCTGCTCACCCTGCCGAGC
CACAGGCCAAAGTTACACTGAACATCTGTTCAAGGTGTGCCAGGCTTCAAGGGGACAACATGAT
GGAAAGGACAGAAGACACATTACAAGTATTTCCTTCTCCAGATGAGATAATCCCAGACTCATTG
GATTCTTTACCTGGGACTGAAGAAACGCTGATGGAAGAAGGTGAAGATTTTGAGAAAACATCTA
ACTTAACAGAACCAGGAGAAGCCTCCAGTGGAGGATACTCTCTGAAATCCTACATGGAAGAAGA
TGAGTCTTTGAAGCAACTGCAGGTTGTGCATCAGCCATGGCTTTTACCAAGTGACACAGAAAGT
GATGGAATTGAAGCAGAACAAGACAAACGTTCTGCTGATCTTCTCTGTGTGCCATGCTCTTCCT
GCCCTACCCTGGTCTACTCAGGTCTGTCTGTTAAACAGGCAAAGGAATTTACAAGTGGTCCTTA
AGGAGACTGTAGCTGACTGAATCCTTACATATAGTCCTACTTTGATGTACTAAATGTAATCTCT
AAGAAATGTTATTTTCCTAATGTTAATAATAAACAAGCACTCTTGTAAGGAGGGTGTGCATCTA
TGTATAGTCCAAGGACACTAATTCAGTCAATTGGCTATGGAATCTTATATCCTTTGATGTGGTC
AGTGTCTTGGGTTTATGTTACTTTATATGTAGTTATTAAAATTAATGTTTGATATATTAAATGT
TGGCTGACTCGAGTGCTTAAAAATTTCTGGATTTTAATTTAGCTAAGGTTTTCTACCTCTATTT
TTATAATAGTATCTCATATTTCGGGTTAATAAACATTACACTTGCCCACATGTGCCATGATATA
GCATTAGTCCTTTGCAGCAGTTAACTGCTTGGTGTTAGCCTCTGAGATGTAAACTCTTTGCATT
GGGAAGAAATTTACCCCCCACAACTGCCCCAATATCATTATATTACCATTCCTATTAAAATATA
TCAATATGTTACTTCAGTAAAGCAAAATAATGAATAATGAAATGCATGCCCTCAGAGCACTTGC
AAGGAAAATCACTGGTTCATTTATCCAATTAGTGAGACACATTAAGACTTCCAGTTTAAATCTG
ATGTATGCCTCTTTTGGAATGTGCTATGCATTGATTCTAAGTGAATGGATCTCAGTTAATCTAT
TATCTACATTTGCTATTTTTATCTTATTTGCCTTAAACGCAAGACTTTTTGGTGGGCTTTAATG
AATTAATGCTAAGTTATACAACTCTGTATAGCTGTGAAAGAAACAATTGTTAAAGACTAAAACA
TAGCTAAGGAATAAACAAGCAATTTCTGACTTCTGAATTAAGTCATGTTTATAAATATAAATAC
TAAAATTATAAATGATGTAATAAATTTTCTTACATTATTGTTTTTGTATGATGAAACTAATTTT
AGTAATAAGTATTTTTATAGAATGGAAATAAATTAAAGGTTTATGTATTAGTTGCTGTTCGTGG
ATGTGACAACATAACTGAGTACCATCAACCTCAAGGAGAAAGTTCTATTTTGGTCCATGTTTTG
GGAGGTCTCAGAGCATGGTCTCCTAGCTCCTTTGCCAATGGCCCATGGTGAAGCAGATTGACAT
GGCAGAAGGACTATGTGATGTGAGATCACTCACTTCATGAAGGCCCAGAAGCATAGAAATTGAA
AGTCAGGAACAACATATACATTTCAGTGACCTACTTCCCCCAGCCAGGTCTAGTCTTCTAGTTT
CCATTACATCCTGATAACCCATTTAAGTGTCTATTCATCAACAGATTACCCCATTGATATAGGT
CTGATAACTTAAGATCCAGTTACTTATCTATCTAAAACATTACTTCCGAAAATGTTATTGGGAA
CCCTACAAGTCTTTGAGAGGGAACATTTTTCATCCAAATTCTAACAGCTCGTAACACAGTTTTT
CAGCAGAAAGCCAGAAGGAGGAAGATTAAATTCGTAGGATGAGAATATTTTTTATTTAACACTT
TGCATCATGAAATGAAGTTTCAAAAAGATTCAACTGGTGATTTGAAATATTTTTCCTGTTAGAA
ATTTTTGGTTTAAAATATGTCACAAATAATGTGTTTATCTGAGAGCCACACTCTCCTCCAGTAA
TGGCATATTGAAACTTGGCCTTCCATTTTCCAACGGACTTTTTCTGAAGACTACCAGTCTCCTG
TCCCACATGAATATCAAAATCCACATGCACCAGGAAATAAGAATTGATGTTACTGCCTGCAGCA
TGGAAGACAGACCAAGTCATACACTAAGCGAAGGTAAGGACAGATGCCAATCAAGAACATCCTG
CTGCAAACAAAAGGAGTCTAGTGTGAACCAAACCCAACTCCACTTTGTACAGAATGGGTGAGTG
TTTCCAAGGCAAAAGGGGTGAGTGGAATTGGTGAGGGCTGAGGGTTTGAGTACAGTCAGGGAAG
TGGAAATTTACAAAACCTATGAGTGGAAAAGGGTGGTTGTTCCAGGTAAAACTCACCTGGCTTT
GCTCAAGAATTTTCCAAAGATACATGTCTAACCTATGACTGAGGTGAGTAGACAGTGTGGCTGG
AACACGGCTGTACAGATTTTTGCCAAGTGGTGCAGAAGTCAGTAACAACCAAGTCATCTGGTCA
GTTGCAAGTTACACCCCATCCAGAAGGGAAGGAAAACAGCAAAGAGCTTCGAGCTAGCAAATAG
TATAATTTTCTGCTTAGGAAGATAATTTCTGGGAACCATGAGGAAATTGGTCATAAAGGGAAAA
AACTGGATGCCAGAGGAATGGCTAGGACACTTATAGAATCAGAGCTGGAGAGCAAACTGCACAG
AAAGGGAGGAATCTAGACAACTAATTGATGAAAGATGGGAAAGAAAGGTCACAGATAGTGTTGA
GATTCTAGCCAGGACACCTGGTGGTGAAATATCTTCAAACGATGTGTAGATGTTCACATGCTCA
GTTCAGCTCAGGATATAGCCAAGATTTTAAGTGTCATCGTTGTGAGGATGATCAAATAGAGCAT
AATAGAAGTTGAGGCTATAGATGATGTCACCTGATGAGTCTGTGCAGTGGAAGGAGGACAGACA
TCCTAGGGAAACACTGGGATTTAAGAGATTGTAAAAGTGATTTCAAGAGTCAACATTTTATAGA
CACTTCACAGAGTGGGTGGTCCACACTCTGTGTCTAGGAAGCAGAAGGTCAAAATCCTTGAACC
TCTAGGTCTCTGGTTCCAGTAAGCACAGCTGGATTTGAAGGAAGAGACAAGTGTGGCCACATTT
GTGGAACCTCTAGTAAGCAAGTTTAATGATGCTGTAGAAATTTCCTGTGCGTGAAATAAAAACA
GCTGTATTGAATAGAAACCTGCATGGAAGAAACTTAGCTTCTTCCTCATTTACGTCCTAAATAA
GGCATTGCAAACCTCAGGTCTTTTCAGTCAGTGTGTTCTGATGTTCTAACTTGACAGTGTCTAT
TTCTTTATTTTGTAGTAATGAAGGGGTTTAGGAATTAGTCCAGCTGGCTTATCTCAATGTAGTC
TTTGTTTACCACCCCCTCTGTGTGTGTGTGTGTGTGTGTGTG

hide sequence

RefSeq Acc Id:

XM_017593566 ⟹ XP_017449055

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	12,316,938 - 12,560,212 (-)	NCBI
mRatBN7.2	5	7,532,280 - 7,777,095 (-)	NCBI
Rnor_6.0	5	7,228,751 - 7,465,234 (-)	NCBI

Sequence:

show sequence

TGCTGACCCATCTGTTTTCCCATGGCGTCTCGTCAACAGACCCGAATCCAGGCTTACCTGGAGA
AAAACAAGATCGGTCCTCTGTTTGAGGAATTAATGACCAAGTTAATAACTGAGACACCTGACCA
ACCAATCCCATTTCTCATTGACCATCTTCAATCTAAACAAGGAAACCGAGGACAACTGCAAAGA
ACTTTGTCAGGGTCAGCGGCTCTCTGGGCAGAAAGCGAATCATCAGAACCCAAAGGAACAAGAA
GGGATTTGAGAAGCTATGATAAACCTTGGCAGATGAATGCAAAGAAGCCTAAAAAATCAAAAAG
TGACCTGGCTGTTTCTAATATTTCTCCTCCATCACCAGACTCCAAATCATTGCCAAGGTCAGTA
GACCATCCTAAGTGGACCTGGCGGACTAAACCACAAAGCCGTGATTTTGATGAATTGAACCACA
TCCTTCAAGAGAGCAAGAAGCTGGGGAAAGCCCTTGAGAAACTCTCTCGAAGTATTGCGACATC
AGATGAACTTGATAAGGAAACAGTGGCTTTCAATTCCTCCCTTCTGAGACCTCGTGTGATTGGG
GAATGGATCGGCAGAGCAGAAAACGATGCCGATCCCCTCGCAGCTGAAATGCTGCAGCCGCCGG
TCCCGCGGAGTAAGAATGACTCATGGGAAAGTGAAGACAGCAGCTCTAGTCCGGCGGGAAGCTT
GAAGATGGAGCCCAAGACGAAGGGACTAAAGCAACAGCAGCAGCAGCATAAGAAACTCCTGGCT
GCAATGCTCTCCCAGGATTCCTTCGAGTCCATCCACAGCCCCACGCCATCTGTAATAGAAGAAG
ACATTGACAATGAAGACGATGCAATGGAGTTGCTGGACCTGTTGTCTATAAAATACACCCACCT
TCTAAGAAAGTCTTGTGATTATAAGGTTGCTTTAGAAGAAAATCACAGAGTTGAAAGATGTTGG
CCGTAGATTAATGTTGGACACCTTTCGAACGTTAGGGAGCCTTGCAGAGATTGCGAAGTCTGCC
GACTCATTGCCTTCACACACCTTCACTAACTTTGTAGGTACACTTCTTCTCTGTTTTTTTGCTT
TTTTATTTTTAGTGATTTAAGTACATGGTCTTGTATCAGTAGAAATATCATCATATAAATTATC
CTCATATAAATTGTTAATTGATACTTACTTTGGGAATTCGTTTTTTTCAAAACAGGCTTTCTCT
GTGTAGTCCTGGCTGTCCTGGAACTCACTCTGTTGACCAGGCTGACCTTGAACTCAGAGATCCA
CCTGCCTCTGCCTCCTAAGTGTTGGGATTAAGGTGTGCATTGCCATGCCCAGCTAAAAAAATCA
TTTTTGCAGAGGAAGGAACTTTTCTTAGCCAAGCAGTCCACATGTAAAATGGCGTGTTCTTGAT
TGAATGGTACTTATTATTATATTATAGAGAATTGAAACAATTGGTATATGCTTTTATAACAACA
ATCTATTATATTTAAGTAAAAAAAGAATAAACAATGTAACTACCTGTAGAATATCAATGCATAG
CAAAGGTATTTCATTTAGAATTCTCAAACAGATTTCTTATGAAACAGAATTAGGTGTTGATAAC
AGTAAGTTACATTCTATATAAATGATGTCTCCGTGCATATACCTGCAAAGATGTTATTCAGTCA
ACGATGGCAGGGCTCGAGATCTTTTCTAATGCTCTAATAACTACCTTGAGTCTAGAATTAAGGC
GACTGACGAATGGCACTTTTCATTAGATACTATTGGTCCTTGTTTTCTTTTAAGCAATTGAGTC
TTATTCCCGTAAGTCCAAATCATTAATGTGACCGGGCTTTTGGATGCCATGATACCTTTATTCA
TCCTTCATTCACTACAAAGGATTTTGACCTAAAGACATAAAATAAAATGATATCTGTTGCAGGC
TTTTTCAGTCAGGTTAAAAATGGAAACTTGTCACTTCCACCATGTTCTTTACATGCTGCACAGG
CACATGTAGTGGTATGTCCTAGTACAAAAGTGGGCGCAGAGGTTACTGCACACTGTTTCAAGAA
GCTGATTCCTCTTCTTAGTCCTGCAGGACAAGGAGGTGTAAACCTGGGAGGAGGAGTGTGCCCA
GACTCCTGGGGGCTTTTTCACACACATGCAGGGTCTTCTGTAACCATGACTGTCAACTGCTTTC
CTGCTGGTCAGGACAGTGAAAGAGATGATCCACGGACTCTCAAGAGACTCACATGTCTACCTTA
TGCTGATTGTCCCTAGACATCAACTGCTCTGCTCAGAAGTTTCTAAGCTGAAGACCAGAGGGTT
GGGTCTTGGTGTCTACATCGTGACAAGCCATTCGCAACTGGCTCTCATTAATCCTTCTTCTCCC
TTTAGATATTTAGCCTGCTTTCTGACCGAGCTTTATGGTAAAGAATAGTGGAAGCTTTGGGCTT
TCTCGGTGTCACCTCACATATCTCTGCCCAGGTGGCTAAAAATGACGCTGCTCTCTTAGTGACA
AGCATTCCTCGTGATGATGTGCAATGCTCAAGCACACAACAGTGGCCTTAACTCCACATGCGTT
TTCTCTGGTTCTGTAAATGATCCCAGAGGAACGTGGAGTTGTGCTTAGCTGAAGAAAACACAAA
CGTTACTAACTTGAAATTGTACGCAAAGTAAAAATTTAGTACATAGATTCGTTGTTAAGATGTA
ACAGATATTGCTGTTTAAAATATCTTTTGGGATCTATGATGTGTTGTAGAATGAGTTTGCTGTA
ATAAGTTTTTAAGAGTTCAAATTTTTATTATTTATGCCATAGTAAAATAAGCTAAAAATGTGTT
ATGCATGGAAAATAATATGTAAATATGAATTGATAAGTAAAATACATGTTTTTAGTCAATATTA
ATATAAAAATGAATTATGCATCAATGAAATTGGTTGACCTAAACAGAAAATGTTTTAGTGAAGA
TAGCAGATATAAATAAACCTAGTTCTTCTTGTTGTCTTTATTGAAATACAATGTTGTTAATATG
ATGATTATATATTCATGGTTTAATTGTATGTCTGTGGATGTATTTTATAAATATATTAGGCATG
TGGAAATAATTTTGGGATTCATTTTATATTAATATTTATGATTATTTTAAATCTATTTATAAAT
TCAGAGTGTGAAAGTAACCACTTAGGAAATTAATATTAACTATCAAATGATGAACTATCTGTAC
TTGGAGATTTTAAAAGACATCAATAAAAAGTACCCCTGAAATTGGCTCTAGATATCCAAAATCT
AGAGTAAAAGCATCTTCCCACCCATCTCAAACAATCTATTTCTCAACCATAAATGTAAGGCAGC
CTCAATTATTTTGGTGGTTATGCTGCCACGGAATAATCAGGGTGTGCAGAGACTCTTTGCAGAA
AATGATCACATTTTCTAAAACATCTACTAAACTCAGGAGTTGTTTTCAAAAACGGTATGAGAGA
AAATGAGTTTCCCAGATCACGTGTGGTTTCTTTCTTTATCCTCCCAGGGAATTTGAGGAACTGT
TGAAGACGTTGAGTTGTGTGACCGTCTTCCCATTTTCCCGTGTCGCCTATTCACAGCATCACAT
TAGACATGTAACAGTAATGTGTAGTTCATTGCTTTCGACACAGTTTGTACTGATTTATACCCAT
TTAAAAAACTAGGATAAAAGGCTCTACTACTTTATTACACACTTTAGTTGAAACTATTACTTTT
AAAATATTTTAGGCTTTCTTAGGTTTGAGGACAAGGCAACTGTCTGAAATCATATTCCTGAGAT
GCTAAAGCCATTAATCATACTTAGTTATACTTTCTGGCCTTAGCTCAGAATTATATAATTTAAA
TTAAAGCTTGCTCTACACTGCCTCAAACAAGCAATGTTGCCATAAACTTACTCATTTTAAGATT
AAATAATTAAGAGTTTTAGTATAATTGCAGTGGTATTCCTTGACAAATGCAGTTTCTAGGTCTC
CAATATCTTACCAAATAAATCAACTCATTATTGGCAAAATACCGAGAGGATTTAATGGAGATGC
CCTTTTGGCCAATTCTTCTGCATCGCAACGAACTTTGTGTAAGACAAACATTCACTGCCGTGTG
TTTGGTTAAATTGGAGGCAGAAAAACCTTCTTATATTTACAAAGTAATATTGGGCCATTGTATC
TGATGAGAGAGGAAGGCTGCCATTGTGGCCTAAGGAAGGGGGCCCTAAATGTTGTTTATACTTT
ACTCACTTAAAACCTGTAAACCAGTCTAAACCAGAAGAGACCAGCAGCATAGGCCTCTCTGGTT
TTGTTTGTTTGTTTGTTTCCTTATAGAATTGATCATTTGGCACGTCAGAATAGCAAAGCAAACT
GAAGAGTCTTCATAAAAAAATGATTCTTTAAAAAAATATTGAGGACTTTCACACATTCAACCAC
AAAGTATTTTAATATTACCTATAAGATTGCTTAAAATATTAATTCATTCAGTATAGTATAAAGG
AAAGGTAATTGAAATTAGTGCCCATTATAGATAAAATATCCAAATGGGGAGTGCTTAACCTATA
GTGATTAAAACACTCAGAAGGTTAATATTTAAGATACTGAAAAGAGTTACCTCAATCCAAGTCA
GGTTTATCTTTACCTATAGGATATTCTAACAAACTCCATTAATTTTTCTGCAGCTGATTATCAC
AATTAACCAAACCTTACAGAGAAGCACTAAACCAGTGCAACTGCAGACCTAAGACATCCTGAAG
TCGTGTGAGATATCTGTCACTTGTCACGATATCTCCCCTGTGACAGAAGCTCTGTAGAAGGTCC
CACTCCTATGTTGGCACCCATGCTCTGAGCTGTAATTTCAGTTAGCTTTCATGTTGTCATTGCC
TACATGAAATCCCTGAAGACACACACAGTGTCCGTGTGGTCCAAGGACTTGAAGACTGTGCTGG
ACTCTTTTGGTTAGAACGCCATTTTAGAAAATATACTCCAGCCCGTGTTTTCCCATTGCAAACC
CTGTGCAGCTGCTGGGCGTGGATGTTAGCACACTATATGAGGGGTGTTGCATCTTATGATTAAT
TTTAAAAAGCCATTTGATCCCTTCGAGTTTACTGCTAAGGGCTGGTGCTGTGGGAAGGCAGAAG
ATCATCCTCCATCTCTCAAACCGTTCATGTTCATTCCACGTTGGCAAGTTTCCCTCCTAAGTCT
ATACCTACCACGTACAGAGGGAATTTGAATGTTTGTAGGACTTCAGACTCGCACAGATATACAA
GTCTGGATTGCAGATGCCGACTCTCAAGGTTTGATTTGCTTGGGAATCCTCAAAGGGCCATCTT
TAAACAAGGACTCAGCATTCCTCACACACAGTAATCTGTTAATTAGATTGAAATCCAACCCATG
AAGCAGATTTTGCCTAATAACACCTTTCCGACTGTAGTAGATTCAGTTATAGGCAGTCTGTCAA
ACTCATAAGAACACTGACAGAAAGGACATGAACCAGTGCATGAGGAGGCTCAATGTTTACAGCC
ATGAAGTGGAGGTTTCTGAGTCATCCACACTCACCAATTTGTTTTGTGTTTGGAATTCTACTCA
TGCTTTGTTCTTTTCATTCGTTATTTTTATTTCTTTTCAAAGATACCAGAATTTTTGCTAACAG
TAATGGTATATGTGGAAAAGGCTCTTTAAATAAAGTATAATACAAGATGTCACCAAGACTGTAC
ATACCATTTGATATAACTTATATGGCATATGACAAGAAATGCTTCACTTTCCACCTGTAAAAAT
AAAACAGACCCAACTGTGGAGCACTTTAATGCAGGAGAATAAAGGTAATAGTTTGCAAGCAGCT
TCTAATCATGCAGACAAATCTTGTATAGTGATGATTGTACTTCAGGTGGAAATTCCTCACTCAG
CAGAGAACTGTTTCTGATTATTTCTGTGTAGGTTTGCTTAAGATATACTGATTAGCTACACTAA
ACTATAAATTGATTGACACCTACCAACGGCTCCGTTTAGTGTGTTTTTCACACATGTGCTGTGG
CTTTTCCTTGAGCATTTTGTGAACTGTGGGCCACTGTGATGTGGTGTAGGTGACTTGGCCAAAG
ACCTGTGCTCTAATTCTAAGGCCCAAATCTTCTCCCATGCTACCTCTTGCTAGGCTTTTCTCAC
ATTTTTGCTATTTTGGTTTTGATTTTTAATCTTTTGCTAATCTTTGAACTTCAGGCAATTAGTT
GTAAGTTGCTGGTCGCACCATGCGCCCTCCCTACTCCACAGGAACGGCACGAAGTAATGAGATA
TTCTCAGAAGTAACACATTCCTCTTTCATCACCACTGAGAGGAATACTTGGGGAGAGACACAGA
TTTATGTCCCAACTCTTCTCCACAACAGGTTCTCTAACCTATGGCTGTTATGCAATCGGAGGCA
GAAGAACGTAGGACCTGGAGTTTCTCACAGCACAATAATATACTTGGAGAGCCAGGCTCTGAGA
CCCCAAATGTGACACGGGCAAGCTTGCAAACAGTGCTGCCTGCCTGCTCGCAGCGTCTGTCTTT
TGCTTGACCCGTAGAGATTTAAGCAGGGGCAGTGACTTCTGTGACTTGTTAAAAATGGGGCGCA
GATGGCTAGACTGTCTACTTTTTCCCTATAAATGTAAAATTTATAGGAGAAAAGAAAGTTATTT
TGTATACATGCAGATGTTCACCCTAGTAGACACAGCTTGGAAAAGAAGAGAAAGAGGGATCTGG
ATCAAATTCAGAAAATCTATAACTGTAACTCATGTTTCCGTGTTTCTACACAGATCAATTACTG
AGCTTGTTACAGTGCACAGGATTTAATAATGCTTTCAAGGTCTGTTAGCAAATACGAAACTATT
TGAACAATTTTGGTTTAGTGTTAACTCATTCAAGGTGAAAAATCGACCAAATTCCATAGCAGTT
TCAATATTATTAGAGTCTTGTTGCTTTAGGAGTAAACCTTTCCTTTCCGAACACTTCCTACATG
ACTATGTGATATTGCAGGATGGTTTGTTCACCACGTACTTATTTTCATGTAATTGGAATTTGAA
CTTTTCGCTTTATATAAGACTAATTTGAAACTCAGGACGAATCACAACTTTGTTATATTTTATT
GGTTGATACAAATGAATTGTAATTGTTTGCAACTTAATGTCAAAATCAATAGCTTATTAAAGAC
ATGTTGCAATTCTGATTTCTTTAAATCTGGTTTTATAGCTAAAATATCTGTTTAGATATTTCTA
TTCATAATATACCAAGCCACATGTTTAATTGTTTTCAATAAATGCTTAGGTGAAACAGAATGCT
AAAAAGAATGTTCACACGACTTGACAACTATTTCCCCAAACCGTTGTTCTTGTGAAATAAAGTT
TTCTTTAAAAACCATT

hide sequence

RefSeq Acc Id:

XM_039110519 ⟹ XP_038966447

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	12,021,756 - 12,560,212 (-)	NCBI
mRatBN7.2	5	7,237,970 - 7,777,118 (-)	NCBI

RefSeq Acc Id:

XM_039110520 ⟹ XP_038966448

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	12,021,756 - 12,512,149 (-)	NCBI
mRatBN7.2	5	7,237,970 - 7,729,471 (-)	NCBI

RefSeq Acc Id:

XM_039110521 ⟹ XP_038966449

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	12,021,756 - 12,559,320 (-)	NCBI
mRatBN7.2	5	7,237,970 - 7,776,317 (-)	NCBI

RefSeq Acc Id:

XM_063288168 ⟹ XP_063144238

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	12,021,756 - 12,560,212 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_001102729	(Get FASTA)	NCBI Sequence Viewer
	NP_001182577	(Get FASTA)	NCBI Sequence Viewer
	XP_017449050	(Get FASTA)	NCBI Sequence Viewer
	XP_017449051	(Get FASTA)	NCBI Sequence Viewer
	XP_017449052	(Get FASTA)	NCBI Sequence Viewer
	XP_017449053	(Get FASTA)	NCBI Sequence Viewer
	XP_017449055	(Get FASTA)	NCBI Sequence Viewer
	XP_038966447	(Get FASTA)	NCBI Sequence Viewer
	XP_038966448	(Get FASTA)	NCBI Sequence Viewer
	XP_038966449	(Get FASTA)	NCBI Sequence Viewer
	XP_063144238	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDM11539	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000060947
	ENSRNOP00000060947.4
	ENSRNOP00000078997
	ENSRNOP00000078997.1
	ENSRNOP00000111368
	ENSRNOP00000111368.1

RefSeq Acc Id:	NP_001102729 ⟸ NM_001109259
- Peptide Label:	isoform 1
- UniProtKB:	D3ZPH6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MASRQQTRIQAYLEKNKIGPLFEELMTKLITETPDQPIPFLIDHLQSKQGNRGQLQRTLSGSAA LWAESESSEPKGTRRDLRSYDKPWQMNAKKPKKSKSDLAVSNISPPSPDSKSLPRSVDHPKWTW RTKPQSRDFDELNHILQESKKLGKALEKLSRSIATSDELDKETVAFNSSLLRPRVIGEWIGRAE NDADPLAAEMLQPPVPRSKNDSWESEDSSSSPAGSLKMEPKTKGLKQQQQQHKKLLAAMLSQDS FESIHSPTPSVIEEDIDNEDDAMELLEDLDDLRMEGVTSLVLSGSKFNQGRPAHPAEPQAKVTL NICSRCARLQGDNMMERTEDTLQVFPSPDEIIPDSLDSLPGTEETLMEEGEDFEKTSNLTEPGE ASSGGYSLKSYMEEDESLKQLQVVHQPWLLPSDTESDGIEAEQDKRSADLLCVPCSSCPTLVYS GLSVKQAKEFTSGP hide sequence

RefSeq Acc Id:

XP_017449053 ⟸ XM_017593564

- Peptide Label:

isoform X6

- Sequence:

show sequence

MASRQQTRIQAYLEKNKIGPLFEELMTKLITETPDQPIPFLIDHLQSKQGNRGQLQRTLSGSAA
LWAESESSEPKGTRRDLRSYDKPWQMNAKKPKKSKSDLAVSNISPPSPDSKSCIATSDELDKET
VAFNSSLLRPRVIGEWIGRAENDADPLAAEMLQPPVPRSKNDSWESEDSSSSPAGSLKMEPKTK
GLKQQQQQHKKLLAAMLSQDSFESIHSPTPSVIEEDIDNEDDAMELLEDLDDLRMEGVTSLVLS
GSKFNQGRPAHPAEPQAKVTLNICSRCARLQGDNMMERTEDTLQVFPSPDEIIPDSLDSLPGTE
ETLMEEGEDFEKTSNLTEPGEASSGGYSLKSYMEEDESLKQLQVVHQPWLLPSDTESDGIEAEQ
DKRSADLLCVPCSSCPTLVYSGLSVKQAKEFTSGP

hide sequence

RefSeq Acc Id:	XP_017449050 ⟸ XM_017593561
- Peptide Label:	isoform X2
- UniProtKB:	A6JFE3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MASRQQTRIQAYLEKNKIGPLFEELMTKLITETPDQPIPFLIDHLQSKQGNRGQLQRTLSGSAA LWAESESSEPKGTRRDLRSYDKPWQMNAKKPKKSKSDLAVSNISPPSPDSKSLPRSVDHPKWTW RTKPQSRDFDELNHILQESKKLGKALEKLSRSIATSDELDKETVAFNSSLLRPRVIGEWIGRAE NDADPLAAEMLQPPVPRSKNDSWESEDSSSSPAGSLKMEPKTKGLKQQQQQHKKLLAAMLSQDS FESIHSPTPSVIEEDIDNEDDAMELLEDLDDLRMEGVTSLVLSGSKFNQGRPAHPAEPQAKVTL NICSRLQGDNMMERTEDTLQVFPSPDEIIPDSLDSLPGTEETLMEEGEDFEKTSNLTEPGEASS GGYSLKSYMEEDESLKQLQVVHQPWLLPSDTESDGIEAEQDKRSADLLCVPCSSCPTLVYSGLS VKQAKEFTSGP hide sequence

RefSeq Acc Id:

XP_017449052 ⟸ XM_017593563

- Peptide Label:

isoform X4

- Sequence:

show sequence

MASRQQTRIQAYLEKNKIGPLFEELMTKLITETPDQPIPFLIDHLQSKQGNRGQLQRTLSGSAA
LWAESESSEPKGTRRDLRSYDKPWQMNAKKPKKSKSDLAVSNISPPSPDSKSLPRSVDHPKWTW
RTKPQSRDFDELNHILQESKKLGKALEKLSRSIATSDELDKETVAFNSSLLRPRVIGEWIGRAE
NDADPLAAEMLQPPVPRSKNDSWESEDSSSSPAGSLKMEPKTKGLKQQQQQHKKLLAAMLSQDS
FESIHSPTPSVIEEDIDNEDDAMELLEDLDDLRMEGVTSLVLSGSKFNQGRPAHPAEPQAKVTL
NICSRLQGDNMMERTEDTLQVFPSPDEIIPDSLDSLPGTEETLMEEGEDFEKTSNLTEPDESLK
QLQVVHQPWLLPSDTESDGIEAEQDKRSADLLCVPCSSCPTLVYSGLSVKQAKEFTSGP

hide sequence

RefSeq Acc Id:	XP_017449051 ⟸ XM_017593562
- Peptide Label:	isoform X3
- UniProtKB:	A0A8I5ZLX5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MASRQQTRIQAYLEKNKIGPLFEELMTKLITETPDQPIPFLIDHLQSKQGNRGQLQRTLSGSAA LWAESESSEPKGTRRDLRSYDKPWQMNAKKPKKSKSDLAVSNISPPSPDSKSLPRSVDHPKWTW RTKPQSRDFDELNHILQESKKLGKALEKLSRSIATSDELDKETVAFNSSLLRPRVIGEWIGRAE NDADPLAAEMLQPPVPRSKNDSWESEDSSSSPAGSLKMEPKTKGLKQQQQQHKKLLAAMLSQDS FESIHSPTPSVIEEDIDNEDDAMELLEDLDDLRMEGVTSLVLSGSKFNQGRPAHPAEPQAKVTL NICSRCARLQGDNMMERTEDTLQVFPSPDEIIPDSLDSLPGTEETLMEEGEDFEKTSNLTEPDE SLKQLQVVHQPWLLPSDTESDGIEAEQDKRSADLLCVPCSSCPTLVYSGLSVKQAKEFTSGP hide sequence

RefSeq Acc Id:

XP_017449055 ⟸ XM_017593566

- Peptide Label:

isoform X8

- Sequence:

show sequence

MASRQQTRIQAYLEKNKIGPLFEELMTKLITETPDQPIPFLIDHLQSKQGNRGQLQRTLSGSAA
LWAESESSEPKGTRRDLRSYDKPWQMNAKKPKKSKSDLAVSNISPPSPDSKSLPRSVDHPKWTW
RTKPQSRDFDELNHILQESKKLGKALEKLSRSIATSDELDKETVAFNSSLLRPRVIGEWIGRAE
NDADPLAAEMLQPPVPRSKNDSWESEDSSSSPAGSLKMEPKTKGLKQQQQQHKKLLAAMLSQDS
FESIHSPTPSVIEEDIDNEDDAMELLDLLSIKYTHLLRKSCDYKVALEENHRVERCWP

hide sequence

Ensembl Acc Id:

ENSRNOP00000060947 ⟸ ENSRNOT00000066254

RefSeq Acc Id:	XP_038966447 ⟸ XM_039110519
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038966449 ⟸ XM_039110521
- Peptide Label:	isoform X9

RefSeq Acc Id:	XP_038966448 ⟸ XM_039110520
- Peptide Label:	isoform X5

Ensembl Acc Id:

ENSRNOP00000078997 ⟸ ENSRNOT00000096147

RefSeq Acc Id:	NP_001182577 ⟸ NM_001195648
- Peptide Label:	isoform 2

RefSeq Acc Id:	XP_063144238 ⟸ XM_063288168
- Peptide Label:	isoform X7

Ensembl Acc Id:

ENSRNOP00000111368 ⟸ ENSRNOT00000164316

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-D3ZPH6-F1-model_v2	AlphaFold	D3ZPH6	1-459	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1564053	AgrOrtholog
BioCyc Gene	G2FUF-42222	BioCyc
Ensembl Genes	ENSRNOG00000005375	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000066254	ENTREZGENE
	ENSRNOT00000066254.5	UniProtKB/TrEMBL
	ENSRNOT00000096147	ENTREZGENE
	ENSRNOT00000096147.2	UniProtKB/TrEMBL
	ENSRNOT00000164316	ENTREZGENE
	ENSRNOT00000164316.1	UniProtKB/TrEMBL
Gene3D-CATH	cAMP-dependent protein kinase regulatory subunit, dimerization-anchoring domain	UniProtKB/TrEMBL
InterPro	DUF5586	UniProtKB/TrEMBL
KEGG Report	rno:500390	UniProtKB/TrEMBL
NCBI Gene	500390	ENTREZGENE
PANTHER	PTHR32000	UniProtKB/TrEMBL
	SIMILAR TO HYPOTHETICAL PROTEIN	UniProtKB/TrEMBL
Pfam	DUF5586	UniProtKB/TrEMBL
PhenoGen	C5h8orf34	PhenoGen
RatGTEx	ENSRNOG00000005375	RatGTEx
Superfamily-SCOP	Dimerization-anchoring domain of cAMP-dependent PK regulatory subunit	UniProtKB/TrEMBL
UniProt	A0A8I5ZLX5	ENTREZGENE, UniProtKB/TrEMBL
	A0ABK0M037_RAT	UniProtKB/TrEMBL
	A6JFE3	ENTREZGENE, UniProtKB/TrEMBL
	D3ZPH6	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2023-09-19	C5h8orf34	similar to human chromosome 8 open reading frame 34	RGD1564053	similar to hypothetical protein	Symbol and Name Changed	1299863	APPROVED
2008-04-30	RGD1564053	similar to hypothetical protein	RGD1564053_predicted	similar to hypothetical protein (predicted)	'predicted' is removed	2292626	APPROVED
2006-03-07	RGD1564053_predicted	similar to hypothetical protein (predicted)	LOC500390	similar to hypothetical protein	Symbol and Name status set to approved	1299863	APPROVED
2006-02-09	LOC500390	similar to hypothetical protein			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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