Fibin (fin bud initiation factor homolog) - Rat Genome Database

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Gene: Fibin (fin bud initiation factor homolog) Rattus norvegicus
Analyze
Symbol: Fibin
Name: fin bud initiation factor homolog
RGD ID: 1563711
Description: Predicted to enable protein homodimerization activity. Predicted to be located in endoplasmic reticulum. Orthologous to human FIBIN (fin bud initiation factor homolog); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 6-propyl-2-thiouracil; acrylamide.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: fin bud initiation factor; fin bud initiation factor homolog (zebrafish); hypothetical protein LOC499856; LOC499856
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr83117,396,973 - 117,399,244 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl3117,391,724 - 117,399,479 (-)EnsemblGRCr8
mRatBN7.2396,942,405 - 96,944,676 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl396,942,406 - 96,944,676 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx3100,521,503 - 100,523,774 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.03109,120,453 - 109,122,724 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.03106,865,048 - 106,867,319 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.03101,545,207 - 101,547,478 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl3101,545,208 - 101,547,478 (-)Ensemblrn6Rnor6.0
Rnor_5.03108,150,072 - 108,152,343 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4395,877,764 - 95,880,035 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera395,952,920 - 95,955,191 (-)NCBICelera
Cytogenetic Map3q34NCBI
JBrowse:




Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
17beta-estradiol  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4-dibromophenyl 2,4,5-tribromophenyl ether  (ISO)
2-hydroxypropanoic acid  (ISO)
3,3',5,5'-tetrabromobisphenol A  (ISO)
4,4'-sulfonyldiphenol  (ISO)
4-Hydroxybenzophenone  (ISO)
4-hydroxyphenyl retinamide  (ISO)
6-propyl-2-thiouracil  (EXP)
acrylamide  (EXP)
aflatoxin B1  (ISO)
all-trans-retinoic acid  (ISO)
alpha-Zearalanol  (EXP)
atrazine  (EXP)
avobenzone  (ISO)
benzo[a]pyrene  (ISO)
benzo[b]fluoranthene  (ISO)
Benzo[k]fluoranthene  (ISO)
bisphenol A  (EXP,ISO)
bisphenol F  (ISO)
bromobenzene  (EXP)
buta-1,3-diene  (ISO)
C60 fullerene  (EXP)
cadmium dichloride  (ISO)
calcitriol  (ISO)
carbon nanotube  (ISO)
chloroprene  (ISO)
chrysene  (ISO)
copper atom  (EXP)
copper(0)  (EXP)
copper(II) chloride  (ISO)
crocidolite asbestos  (ISO)
cyclosporin A  (ISO)
deguelin  (ISO)
dibenz[a,h]anthracene  (ISO)
diethylstilbestrol  (EXP)
diuron  (EXP)
dorsomorphin  (ISO)
endosulfan  (EXP)
entinostat  (ISO)
ethylparaben  (ISO)
fenvalerate  (EXP)
formaldehyde  (ISO)
fulvestrant  (ISO)
furan  (EXP,ISO)
glycidol  (EXP)
glyphosate  (ISO)
hydroquinone  (ISO)
Indeno[1,2,3-cd]pyrene  (ISO)
iron dichloride  (ISO)
lead diacetate  (ISO)
manganese atom  (ISO)
manganese(0)  (ISO)
medroxyprogesterone acetate  (ISO)
methylmercury chloride  (ISO)
mono(2-ethylhexyl) phthalate  (EXP,ISO)
Muraglitazar  (EXP)
N-methyl-4-phenylpyridinium  (ISO)
nevirapine  (EXP)
nickel atom  (ISO)
nitrofen  (EXP)
oxidopamine  (ISO)
ozone  (ISO)
paracetamol  (EXP)
perfluorooctanoic acid  (EXP)
phenylmercury acetate  (ISO)
potassium dichromate  (ISO)
progesterone  (ISO)
rac-lactic acid  (ISO)
rotenone  (ISO)
SB 431542  (ISO)
silver atom  (ISO)
silver(0)  (ISO)
sodium arsenite  (ISO)
sunitinib  (ISO)
Tesaglitazar  (EXP)
tetraphene  (ISO)
thifluzamide  (ISO)
thioacetamide  (EXP)
thiram  (ISO)
titanium dioxide  (EXP,ISO)
tremolite asbestos  (ISO)
trichloroethene  (EXP)
trimellitic anhydride  (ISO)
troglitazone  (EXP)
tunicamycin  (ISO)
valproic acid  (ISO)
vorinostat  (ISO)
ziram  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11.
Additional References at PubMed
PMID:21615908  


Genomics

Comparative Map Data
Fibin
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr83117,396,973 - 117,399,244 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl3117,391,724 - 117,399,479 (-)EnsemblGRCr8
mRatBN7.2396,942,405 - 96,944,676 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl396,942,406 - 96,944,676 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx3100,521,503 - 100,523,774 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.03109,120,453 - 109,122,724 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.03106,865,048 - 106,867,319 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.03101,545,207 - 101,547,478 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl3101,545,208 - 101,547,478 (-)Ensemblrn6Rnor6.0
Rnor_5.03108,150,072 - 108,152,343 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4395,877,764 - 95,880,035 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera395,952,920 - 95,955,191 (-)NCBICelera
Cytogenetic Map3q34NCBI
FIBIN
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381126,994,112 - 26,997,087 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1126,994,112 - 26,997,087 (+)Ensemblhg38GRCh38
GRCh371127,015,659 - 27,018,634 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361126,972,204 - 26,975,210 (+)NCBIBuild 36Build 36hg18NCBI36
Celera1127,160,280 - 27,163,286 (+)NCBICelera
Cytogenetic Map11p14.2NCBI
HuRef1126,713,109 - 26,716,115 (+)NCBIHuRef
CHM1_11127,015,039 - 27,018,045 (+)NCBICHM1_1
T2T-CHM13v2.01127,134,604 - 27,137,579 (+)NCBIT2T-CHM13v2.0
Fibin
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm392110,191,270 - 110,193,338 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl2110,191,262 - 110,193,528 (-)EnsemblGRCm39 EnsemblGRCm39
GRCm382110,360,925 - 110,362,993 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl2110,360,917 - 110,363,183 (-)Ensemblmm10GRCm38
MGSCv372110,201,082 - 110,203,150 (-)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv362110,161,764 - 110,163,832 (-)NCBIMGSCv36mm8
Celera2111,520,591 - 111,522,659 (-)NCBICelera
Cytogenetic Map2E3NCBI
cM Map256.7NCBI
Fibin
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554766,325,582 - 6,326,267 (+)Ensembl
ChiLan1.0NW_0049554766,325,492 - 6,327,075 (+)NCBIChiLan1.0ChiLan1.0
FIBIN
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2929,189,499 - 29,196,635 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11129,194,693 - 29,197,012 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01126,947,970 - 26,950,278 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11126,851,351 - 26,853,454 (+)NCBIPanPan1.1PanPan1.1panPan2
FIBIN
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12147,671,719 - 47,674,127 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2147,672,325 - 47,672,960 (+)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha2147,162,870 - 47,164,971 (+)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.02148,812,825 - 48,815,098 (+)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2148,812,915 - 48,813,550 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12147,798,615 - 47,799,383 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02147,965,929 - 47,967,192 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02148,552,124 - 48,554,809 (+)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Fibin
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494737,002,344 - 37,003,140 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365406,157,260 - 6,157,895 (-)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049365406,157,130 - 6,158,321 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
FIBIN
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl233,328,253 - 33,331,593 (-)EnsemblsusScr11Sscrofa11.1
Sscrofa11.1233,328,250 - 33,331,752 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
FIBIN
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1138,103,138 - 38,105,267 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl138,104,089 - 38,104,724 (-)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_023666038135,417,260 - 135,419,360 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Fibin
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462476616,859,956 - 16,861,167 (+)NCBIHetGla 1.0HetGla 1.0hetGla2
Fibin
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v1588,659,731 - 88,661,996 (-)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Fibin
8 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:29
Count of miRNA genes:26
Interacting mature miRNAs:29
Transcripts:ENSRNOT00000006203
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1358293Bw38Body weight QTL 3860.0000031body mass (VT:0001259)body weight (CMO:0000012)374364268119364268Rat
2301414Kidm37Kidney mass QTL 370.001kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)396509147141509147Rat
1582238Bw68Body weight QTL 683.20.0064body mass (VT:0001259)body weight (CMO:0000012)373592512136118980Rat
1582239Epfw1Epididymal fat weight QTL 14.50.0006epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)373592512136118980Rat
70216Cm14Cardiac mass QTL 142.1heart mass (VT:0007028)heart wet weight (CMO:0000069)351581665184004958Rat
2292591Esta4Estrogen-induced thymic atrophy QTL 4thymus mass (VT:0004954)thymus wet weight (CMO:0000855)367641776167835660Rat
1358362Srcrt2Stress Responsive Cort QTL 22.78blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)358601291153936591Rat
737818Hcar12Hepatocarcinoma resistance QTL 122.6liver integrity trait (VT:0010547)volume of individual liver tumorous lesion (CMO:0001078)349872657138829559Rat
1582218Bw74Body weight QTL 743.90.0021body mass (VT:0001259)body weight (CMO:0000012)373592512136118980Rat
1582219Bw63Body weight QTL 633.80.001body mass (VT:0001259)body weight (CMO:0000012)3116582412136118980Rat
1582221Kidm30Kidney mass QTL 303.50.0008kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)385062224136118980Rat
1582210Bw71Body weight QTL 713.30.0012body mass (VT:0001259)body weight (CMO:0000012)385062224136118980Rat
7387306Bw124Body weight QTL 1243.20.0003body mass (VT:0001259)body weight (CMO:0000012)3104545086149545086Rat
1300111Rf12Renal function QTL 123.78renal blood flow trait (VT:2000006)absolute change in renal blood flow rate (CMO:0001168)381425008141509147Rat
724523Tsu1Thymus enlargement suppressive QTL 13.84thymus mass (VT:0004954)thymus weight to body weight ratio (CMO:0000612)370845569136091483Rat
1600376Arunc5Aerobic running capacity QTL 50.21exercise endurance trait (VT:0002332)longest distance run on treadmill (CMO:0001406)393829559138829559Rat
8694437Bw167Body weight QTL 16722.460.001retroperitoneal fat pad mass (VT:0010430)retroperitoneal fat pad weight to body weight ratio (CMO:0000635)3112250810157250810Rat
2302273Gluco35Glucose level QTL 355.30.001blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)3101255536134750886Rat
8662816Vetf4Vascular elastic tissue fragility QTL 44renal artery integrity trait (VT:0010642)number of ruptures of the internal elastic lamina of the renal arteries (CMO:0002563)379649560177741895Rat
1581503Cm58Cardiac mass QTL 582.70.05heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)396509147141509147Rat
2292613Ept16Estrogen-induced pituitary tumorigenesis QTL 168.3pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)367641995130815812Rat
631649Bp123Blood pressure QTL 1233.2arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)3110225882155225882Rat
631200Cm25Cardiac mass QTL 254.80.0001heart left ventricle mass (VT:0007031)heart left ventricle wet weight (CMO:0000071)381541464126563126Rat
12879848Bw181Body weght QTL 1810.015body mass (VT:0001259)body weight (CMO:0000012)390755164141509147Rat
1354597Kidm13Kidney mass QTL 132.9kidney mass (VT:0002707)right kidney wet weight (CMO:0000082)342158111124558371Rat
1358885Bp251Blood pressure QTL 2513.8arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)31141509147Rat
1581546Pur13Proteinuria QTL 132.930.0335urine total protein amount (VT:0000032)urine protein excretion rate (CMO:0000759)398651826167012663Rat
1582252Sual1Serum uric acid level QTL 13.40.0123blood uric acid amount (VT:0010302)blood uric acid level (CMO:0000501)3116582412122654872Rat
1354604Bw36Body weight QTL 362.9body mass (VT:0001259)body weight (CMO:0000012)342158111124558371Rat
1331758Bp207Blood pressure QTL 2072.848arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)3110634702155634702Rat
1358888Bp264Blood pressure QTL 2644.43arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)35675975141509147Rat
1358186Ept2Estrogen-induced pituitary tumorigenesis QTL 28.3pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)367641995130815812Rat
724532Cm17Cardiac mass QTL 172heart mass (VT:0007028)calculated heart weight (CMO:0000073)3116188400161188400Rat

Markers in Region
RH127509  
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr83117,397,081 - 117,397,268 (+)Marker Load Pipeline
mRatBN7.2396,942,513 - 96,942,700 (+)MAPPERmRatBN7.2
Rnor_6.03101,545,316 - 101,545,502NCBIRnor6.0
Rnor_5.03108,150,181 - 108,150,367UniSTSRnor5.0
RGSC_v3.4395,877,873 - 95,878,059UniSTSRGSC3.4
Celera395,953,029 - 95,953,215UniSTS
RH 3.4 Map3765.3UniSTS
Cytogenetic Map3q33UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 67 155 88 87 56 27 56 6 277 127 11 133 70 92 31 17 17

Sequence


Ensembl Acc Id: ENSRNOT00000006203   ⟹   ENSRNOP00000006203
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl396,942,406 - 96,944,676 (-)Ensembl
Rnor_6.0 Ensembl3101,545,208 - 101,547,478 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000143706   ⟹   ENSRNOP00000102678
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl3117,391,724 - 117,399,479 (-)Ensembl
RefSeq Acc Id: NM_001025042   ⟹   NP_001020213
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83117,396,973 - 117,399,244 (-)NCBI
mRatBN7.2396,942,405 - 96,944,676 (-)NCBI
Rnor_6.03101,545,207 - 101,547,478 (-)NCBI
Rnor_5.03108,150,072 - 108,152,343 (-)NCBI
RGSC_v3.4395,877,764 - 95,880,035 (-)RGD
Celera395,952,920 - 95,955,191 (-)RGD
Sequence:
Protein Sequences
Protein RefSeqs NP_001020213 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAH85873 (Get FASTA)   NCBI Sequence Viewer  
  EDL79766 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000006203.1
  ENSRNOP00000102678
GenBank Protein Q5U2T4 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_001020213   ⟸   NM_001025042
- Peptide Label: precursor
- UniProtKB: Q5U2T4 (UniProtKB/Swiss-Prot)
- Sequence:
Ensembl Acc Id: ENSRNOP00000006203   ⟸   ENSRNOT00000006203
Ensembl Acc Id: ENSRNOP00000102678   ⟸   ENSRNOT00000143706

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q5U2T4-F1-model_v2 AlphaFold Q5U2T4 1-217 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13692285
Promoter ID:EPDNEW_R2809
Type:initiation region
Name:Fibin_1
Description:fin bud initiation factor homolog
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.03101,547,455 - 101,547,515EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1563711 AgrOrtholog
BioCyc Gene G2FUF-48467 BioCyc
Ensembl Genes ENSRNOG00000004699 Ensembl, UniProtKB/Swiss-Prot
  ENSRNOG00000073909 Ensembl, ENTREZGENE
Ensembl Transcript ENSRNOT00000006203.4 UniProtKB/Swiss-Prot
  ENSRNOT00000143706 ENTREZGENE
IMAGE_CLONE IMAGE:7191397 IMAGE-MGC_LOAD
InterPro Fibin UniProtKB/Swiss-Prot
KEGG Report rno:499856 UniProtKB/Swiss-Prot
MGC_CLONE MGC:94638 IMAGE-MGC_LOAD
NCBI Gene 499856 ENTREZGENE
PANTHER FIN BUD INITIATION FACTOR HOMOLOG UniProtKB/Swiss-Prot
  PTHR31185 UniProtKB/Swiss-Prot
Pfam Fibin UniProtKB/Swiss-Prot
PhenoGen Fibin PhenoGen
RatGTEx ENSRNOG00000004699 RatGTEx
  ENSRNOG00000073909 RatGTEx
UniProt FIBIN_RAT UniProtKB/Swiss-Prot, ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2018-07-20 Fibin  fin bud initiation factor homolog  Fibin  fin bud initiation factor homolog (zebrafish)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2009-02-25 Fibin  fin bud initiation factor homolog (zebrafish)  Fibin  fin bud initiation factor  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-03-05 Fibin  fin bud initiation factor  LOC499856  hypothetical protein LOC499856  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2006-02-09 LOC499856  hypothetical protein LOC499856      Symbol and Name status set to provisional 70820 PROVISIONAL