Ero1b (endoplasmic reticulum oxidoreductase 1 beta) - Rat Genome Database

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Gene: Ero1b (endoplasmic reticulum oxidoreductase 1 beta) Rattus norvegicus
Analyze
Symbol: Ero1b
Name: endoplasmic reticulum oxidoreductase 1 beta
RGD ID: 1563548
Description: Predicted to enable protein-disulfide reductase activity and thiol oxidase activity. Predicted to be involved in protein folding in endoplasmic reticulum. Predicted to act upstream of or within several processes, including cell redox homeostasis; glucose homeostasis; and insulin processing. Predicted to be located in membrane. Predicted to be active in endoplasmic reticulum lumen and endoplasmic reticulum membrane. Orthologous to human ERO1B (endoplasmic reticulum oxidoreductase 1 beta); PARTICIPATES IN Endoplasmic Reticulum-associated degradation pathway; INTERACTS WITH 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine; 3-chloropropane-1,2-diol.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: endoplasmic reticulum oxidoreductase beta; ERO1-like beta; ERO1-like beta (S. cerevisiae); ERO1-like protein beta; Ero1lb; LOC108353430; LOC364755; RGD1563548; similar to endoplasmic oxidoreductase 1 beta; uncharacterized LOC108353430
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81792,913,696 - 92,987,401 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1792,814,368 - 92,987,555 (+)EnsemblGRCr8
mRatBN7.21785,861,086 - 86,003,244 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1785,929,618 - 86,003,398 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1790,202,454 - 90,243,799 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01794,038,368 - 94,079,707 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01788,054,880 - 88,096,219 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01790,709,394 - 90,783,110 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1790,710,555 - 90,756,048 (-)Ensemblrn6Rnor6.0
Rnor_5.01792,370,228 - 92,443,183 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41767,014,925 - 67,056,056 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1785,609,740 - 85,652,034 (-)NCBICelera
Cytogenetic Map17q12.3NCBI
JBrowse:




Disease Annotations     Click to see Annotation Detail View
cataract  (ISO)

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
1,2-dimethylhydrazine  (ISO)
17beta-estradiol  (EXP,ISO)
17beta-hydroxy-5alpha-androstan-3-one  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2-palmitoylglycerol  (ISO)
3,4-methylenedioxymethamphetamine  (ISO)
3-chloropropane-1,2-diol  (EXP)
4,4'-diaminodiphenylmethane  (ISO)
4,4'-sulfonyldiphenol  (ISO)
acrylamide  (ISO)
aflatoxin B1  (ISO)
all-trans-retinoic acid  (ISO)
amiodarone  (ISO)
arsane  (ISO)
arsenic atom  (ISO)
atrazine  (ISO)
benzo[a]pyrene  (ISO)
bisphenol A  (EXP,ISO)
bisphenol F  (ISO)
bromobenzene  (EXP)
cadmium atom  (ISO)
cadmium dichloride  (ISO)
captan  (ISO)
carbon nanotube  (ISO)
choline  (ISO)
ciguatoxin CTX1B  (ISO)
cisplatin  (ISO)
copper(II) sulfate  (ISO)
corosolic acid  (ISO)
crocidolite asbestos  (ISO)
cyclosporin A  (ISO)
DDE  (ISO)
Dibutyl phosphate  (ISO)
dimethylarsinous acid  (ISO)
dinophysistoxin 1  (ISO)
dioxygen  (ISO)
dorsomorphin  (ISO)
doxorubicin  (ISO)
ethanol  (ISO)
fenpyroximate  (ISO)
folic acid  (ISO)
folpet  (ISO)
genistein  (ISO)
gentamycin  (EXP)
GSK-J4  (ISO)
hydralazine  (ISO)
L-methionine  (ISO)
manganese atom  (ISO)
manganese(0)  (ISO)
manganese(II) chloride  (ISO)
mercury dibromide  (ISO)
methylisothiazolinone  (ISO)
N-nitrosodiethylamine  (ISO)
okadaic acid  (ISO)
paracetamol  (EXP)
phenobarbital  (ISO)
phenylmercury acetate  (ISO)
pirinixic acid  (ISO)
pregnenolone 16alpha-carbonitrile  (ISO)
propiconazole  (ISO)
resorcinol  (ISO)
resveratrol  (ISO)
SB 431542  (ISO)
sodium arsenite  (ISO)
sunitinib  (ISO)
testosterone  (ISO)
tetrachloromethane  (EXP,ISO)
thapsigargin  (ISO)
thiram  (ISO)
titanium dioxide  (ISO)
Tributyltin oxide  (ISO)
trichloroethene  (EXP)
trichostatin A  (ISO)
triphenyl phosphate  (ISO)
tunicamycin  (ISO)
urethane  (ISO)
valproic acid  (ISO)
vinclozolin  (EXP)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:20308425   PMID:22981861   PMID:23589496  


Genomics

Comparative Map Data
Ero1b
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81792,913,696 - 92,987,401 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1792,814,368 - 92,987,555 (+)EnsemblGRCr8
mRatBN7.21785,861,086 - 86,003,244 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1785,929,618 - 86,003,398 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1790,202,454 - 90,243,799 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01794,038,368 - 94,079,707 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01788,054,880 - 88,096,219 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01790,709,394 - 90,783,110 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1790,710,555 - 90,756,048 (-)Ensemblrn6Rnor6.0
Rnor_5.01792,370,228 - 92,443,183 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41767,014,925 - 67,056,056 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1785,609,740 - 85,652,034 (-)NCBICelera
Cytogenetic Map17q12.3NCBI
ERO1B
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381236,215,101 - 236,281,958 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1236,214,681 - 236,282,019 (-)Ensemblhg38GRCh38
GRCh371236,378,401 - 236,445,258 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361234,447,083 - 234,511,908 (-)NCBIBuild 36Build 36hg18NCBI36
Build 341232,706,501 - 232,771,326NCBI
Celera1209,627,835 - 209,694,593 (-)NCBICelera
Cytogenetic Map1q42.3NCBI
HuRef1206,835,842 - 206,902,597 (-)NCBIHuRef
CHM1_11237,650,745 - 237,717,653 (-)NCBICHM1_1
T2T-CHM13v2.01235,617,345 - 235,684,232 (-)NCBIT2T-CHM13v2.0
Ero1b
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391312,580,701 - 12,624,422 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1312,580,755 - 12,626,285 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm381312,565,818 - 12,609,533 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1312,565,874 - 12,611,396 (+)Ensemblmm10GRCm38
MGSCv371312,658,150 - 12,701,795 (+)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv361312,621,007 - 12,664,652 (+)NCBIMGSCv36mm8
Celera1312,482,259 - 12,525,916 (+)NCBICelera
Cytogenetic Map13A1NCBI
cM Map135.07NCBI
Ero1b
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554923,845,626 - 3,908,868 (+)Ensembl
ChiLan1.0NW_0049554923,845,406 - 3,911,671 (+)NCBIChiLan1.0ChiLan1.0
ERO1B
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2112,897,098 - 12,963,445 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1113,109,100 - 13,176,314 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01211,782,071 - 211,849,308 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11216,783,222 - 216,850,719 (-)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1216,786,605 - 216,850,463 (-)EnsemblpanPan2panpan1.1
ERO1B
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.143,710,138 - 3,818,232 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl43,758,122 - 3,817,703 (+)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha43,756,572 - 3,864,656 (+)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.043,730,834 - 3,839,109 (+)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl43,779,458 - 3,839,095 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.143,743,392 - 3,851,491 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.043,860,584 - 3,968,682 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.044,081,063 - 4,189,187 (+)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Ero1b
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934440,330,727 - 40,372,490 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493648416,502,828 - 16,534,887 (+)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_00493648416,495,953 - 16,537,716 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ERO1B
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1455,057,059 - 55,122,171 (+)EnsemblsusScr11Sscrofa11.1
Sscrofa11.11455,056,756 - 55,122,182 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21459,062,819 - 59,101,483 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ERO1B
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12573,378,209 - 73,445,280 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2573,381,153 - 73,445,251 (-)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_02366605575,426,786 - 75,496,453 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Ero1b
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462477514,265,769 - 14,330,032 (+)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_00462477514,265,523 - 14,355,311 (+)NCBIHetGla 1.0HetGla 1.0hetGla2

miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:16
Count of miRNA genes:14
Interacting mature miRNAs:16
Transcripts:ENSRNOT00000003526
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1300131Bp193Blood pressure QTL 1933.3arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)176855004093515804Rat
61466Niddm12Non-insulin dependent diabetes mellitus QTL 123.20.001blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)176515487293515804Rat
4889894Eae33Experimental allergic encephalomyelitis QTL 335.20.0001nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis severity score (CMO:0001419)175560459793006569Rat
2317038Ginf3Gastrointestinal inflammation QTL 32.890.005liver integrity trait (VT:0010547)liver granuloma severity score (CMO:0002157)175482950393515804Rat

Markers in Region
D17Got211  
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr81792,950,120 - 92,950,303 (+)Marker Load Pipeline
mRatBN7.21785,965,957 - 85,966,140 (-)MAPPERmRatBN7.2
Rnor_6.01790,746,591 - 90,746,773NCBIRnor6.0
Rnor_5.01792,407,108 - 92,407,290UniSTSRnor5.0
RGSC_v3.41767,048,565 - 67,048,747UniSTSRGSC3.4
Celera1785,644,111 - 85,644,297UniSTS
Cytogenetic Map17q12.1UniSTS
RH128539  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21785,998,816 - 85,999,000 (-)MAPPERmRatBN7.2
Rnor_6.01790,713,638 - 90,713,821NCBIRnor6.0
Rnor_5.01792,374,472 - 92,374,655UniSTSRnor5.0
RGSC_v3.41767,016,443 - 67,016,626UniSTSRGSC3.4
Celera1785,611,258 - 85,611,441UniSTS
Cytogenetic Map17q12.1UniSTS
RH143797  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21785,956,944 - 85,957,044 (-)MAPPERmRatBN7.2
Rnor_6.01790,756,495 - 90,756,594NCBIRnor6.0
Rnor_5.01792,416,520 - 92,416,619UniSTSRnor5.0
RGSC_v3.41767,056,699 - 67,056,798UniSTSRGSC3.4
Celera1785,652,677 - 85,652,776UniSTS
Cytogenetic Map17q12.1UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 67 165 91 90 59 92 59 6 356 192 11 144 81 92 31 17 17

Sequence


Ensembl Acc Id: ENSRNOT00000003526   ⟹   ENSRNOP00000003526
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1792,941,627 - 92,987,555 (+)Ensembl
mRatBN7.2 Ensembl1785,957,513 - 86,003,398 (+)Ensembl
Rnor_6.0 Ensembl1790,712,120 - 90,755,852 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000085669   ⟹   ENSRNOP00000075470
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1792,941,682 - 92,987,401 (+)Ensembl
mRatBN7.2 Ensembl1785,957,513 - 86,003,244 (+)Ensembl
Rnor_6.0 Ensembl1790,710,555 - 90,756,048 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000100413   ⟹   ENSRNOP00000096082
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1792,814,368 - 92,987,399 (+)Ensembl
mRatBN7.2 Ensembl1785,929,618 - 86,003,244 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000113009   ⟹   ENSRNOP00000076364
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1792,943,174 - 92,987,401 (+)Ensembl
mRatBN7.2 Ensembl1785,956,752 - 86,003,244 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000113322   ⟹   ENSRNOP00000086032
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1792,941,682 - 92,987,401 (+)Ensembl
mRatBN7.2 Ensembl1785,957,513 - 86,003,244 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000115419   ⟹   ENSRNOP00000086364
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1792,941,627 - 92,983,736 (+)Ensembl
mRatBN7.2 Ensembl1785,957,513 - 85,999,579 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000126516   ⟹   ENSRNOP00000108886
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1792,941,627 - 92,987,399 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000139130   ⟹   ENSRNOP00000099505
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1792,913,732 - 92,987,398 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000173413   ⟹   ENSRNOP00000102777
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1792,928,372 - 92,987,399 (+)Ensembl
RefSeq Acc Id: NM_001191893   ⟹   NP_001178822
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81792,941,682 - 92,987,401 (+)NCBI
mRatBN7.21785,957,518 - 86,003,244 (+)NCBI
Rnor_6.01790,712,120 - 90,755,852 (-)NCBI
Rnor_5.01792,370,228 - 92,443,183 (-)NCBI
Celera1785,609,740 - 85,652,034 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001415676   ⟹   NP_001402605
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81792,941,682 - 92,987,401 (+)NCBI
mRatBN7.21785,957,518 - 86,003,244 (+)NCBI
RefSeq Acc Id: XM_008771876   ⟹   XP_008770098
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81792,913,696 - 92,987,401 (+)NCBI
mRatBN7.21785,929,564 - 86,003,244 (+)NCBI
Rnor_6.01790,709,394 - 90,783,110 (-)NCBI
Sequence:
RefSeq Acc Id: XM_039095982   ⟹   XP_038951910
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81792,913,696 - 92,987,401 (+)NCBI
mRatBN7.21785,929,858 - 86,003,244 (+)NCBI
RefSeq Acc Id: XM_063276672   ⟹   XP_063132742
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81792,941,205 - 92,987,401 (+)NCBI
RefSeq Acc Id: XM_063276673   ⟹   XP_063132743
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81792,962,602 - 92,987,401 (+)NCBI
RefSeq Acc Id: XM_063276674   ⟹   XP_063132744
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81792,941,205 - 92,972,031 (+)NCBI
RefSeq Acc Id: XM_063276675   ⟹   XP_063132745
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81792,941,205 - 92,984,608 (+)NCBI
RefSeq Acc Id: NP_001178822   ⟸   NM_001191893
- Peptide Label: isoform 1
- UniProtKB: A0A8I6A593 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008770098   ⟸   XM_008771876
- Peptide Label: isoform X2
- UniProtKB: A0A8I6GLG0 (UniProtKB/TrEMBL),   A0A8I5YBH6 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000075470   ⟸   ENSRNOT00000085669
Ensembl Acc Id: ENSRNOP00000003526   ⟸   ENSRNOT00000003526
RefSeq Acc Id: XP_038951910   ⟸   XM_039095982
- Peptide Label: isoform X2
- UniProtKB: A0A8I6GLG0 (UniProtKB/TrEMBL),   A0A8I5YBH6 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSRNOP00000076364   ⟸   ENSRNOT00000113009
Ensembl Acc Id: ENSRNOP00000086032   ⟸   ENSRNOT00000113322
Ensembl Acc Id: ENSRNOP00000086364   ⟸   ENSRNOT00000115419
Ensembl Acc Id: ENSRNOP00000096082   ⟸   ENSRNOT00000100413
RefSeq Acc Id: NP_001402605   ⟸   NM_001415676
- Peptide Label: isoform 2
- UniProtKB: A0A8I6A593 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063132742   ⟸   XM_063276672
- Peptide Label: isoform X1
- UniProtKB: A0A0G2KAP1 (UniProtKB/TrEMBL),   A0A8I6A593 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063132745   ⟸   XM_063276675
- Peptide Label: isoform X5
- UniProtKB: A0A8I6A3H1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063132744   ⟸   XM_063276674
- Peptide Label: isoform X4
- UniProtKB: A6KTE1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063132743   ⟸   XM_063276673
- Peptide Label: isoform X3
Ensembl Acc Id: ENSRNOP00000099505   ⟸   ENSRNOT00000139130
Ensembl Acc Id: ENSRNOP00000108886   ⟸   ENSRNOT00000126516
Ensembl Acc Id: ENSRNOP00000102777   ⟸   ENSRNOT00000173413

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-A0A0G2KAP1-F1-model_v2 AlphaFold A0A0G2KAP1 1-467 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13700633
Promoter ID:EPDNEW_R11145
Type:initiation region
Name:Ero1b_1
Description:endoplasmic reticulum oxidoreductase 1 beta
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01790,756,021 - 90,756,081EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1563548 AgrOrtholog
BioCyc Gene G2FUF-8455 BioCyc
Ensembl Genes ENSRNOG00000002609 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000003526.8 UniProtKB/TrEMBL
  ENSRNOT00000085669 ENTREZGENE
  ENSRNOT00000085669.3 UniProtKB/TrEMBL
  ENSRNOT00000100413 ENTREZGENE
  ENSRNOT00000100413.2 UniProtKB/TrEMBL
  ENSRNOT00000113009.2 UniProtKB/TrEMBL
  ENSRNOT00000113322 ENTREZGENE
  ENSRNOT00000113322.2 UniProtKB/TrEMBL
  ENSRNOT00000115419 ENTREZGENE
  ENSRNOT00000115419.2 UniProtKB/TrEMBL
  ENSRNOT00000126516.1 UniProtKB/TrEMBL
  ENSRNOT00000139130.1 UniProtKB/TrEMBL
  ENSRNOT00000173413.1 UniProtKB/TrEMBL
InterPro ERO1 UniProtKB/TrEMBL
  ERO1-like_sf UniProtKB/TrEMBL
NCBI Gene 364755 ENTREZGENE
PANTHER ERO1-LIKE PROTEIN BETA UniProtKB/TrEMBL
  PTHR12613 UniProtKB/TrEMBL
Pfam ERO1 UniProtKB/TrEMBL
PhenoGen Ero1b PhenoGen
PIRSF ERO1 UniProtKB/TrEMBL
RatGTEx ENSRNOG00000002609 RatGTEx
Superfamily-SCOP SSF110019 UniProtKB/TrEMBL
UniProt A0A0G2KAP1 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I5YBH6 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6A3H1 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6A593 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6GLG0 ENTREZGENE, UniProtKB/TrEMBL
  A0ABK0KXP5_RAT UniProtKB/TrEMBL
  A0ABK0LLI4_RAT UniProtKB/TrEMBL
  A0ABK0LSA5_RAT UniProtKB/TrEMBL
  A6KTE1 ENTREZGENE, UniProtKB/TrEMBL
  D3ZNZ5_RAT UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2021-03-09 Ero1b  endoplasmic reticulum oxidoreductase 1 beta  LOC108353430  uncharacterized LOC108353430  Data merged from RGD:11384886 737654 PROVISIONAL
2016-08-02 LOC108353430  uncharacterized LOC108353430      Symbol and Name status set to provisional 70820 PROVISIONAL
2016-07-07 Ero1b  endoplasmic reticulum oxidoreductase 1 beta  Ero1b  endoplasmic reticulum oxidoreductase beta  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2015-06-24 Ero1b  endoplasmic reticulum oxidoreductase beta  Ero1lb  ERO1-like beta (S. cerevisiae)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-03-06 Ero1lb  ERO1-like beta (S. cerevisiae)  RGD1563548_predicted  similar to endoplasmic oxidoreductase 1 beta (predicted)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2006-03-07 RGD1563548_predicted  similar to endoplasmic oxidoreductase 1 beta (predicted)  LOC364755  similar to endoplasmic oxidoreductase 1 beta  Symbol and Name status set to approved 1299863 APPROVED
2006-02-09 LOC364755  similar to endoplasmic oxidoreductase 1 beta      Symbol and Name status set to provisional 70820 PROVISIONAL