Epha10 (EPH receptor A10) - Rat Genome Database

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Gene: Epha10 (EPH receptor A10) Rattus norvegicus
Analyze
Symbol: Epha10
Name: EPH receptor A10
RGD ID: 1562679
Description: Predicted to enable transmembrane-ephrin receptor activity. Predicted to be involved in axon guidance and ephrin receptor signaling pathway. Predicted to be located in membrane. Predicted to be active in dendrite and plasma membrane. Human ortholog(s) of this gene implicated in autosomal dominant nonsyndromic deafness 88. Orthologous to human EPHA10 (EPH receptor A10); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,3,7,8-Tetrachlorodibenzofuran; acetamide.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: ephrin type-A receptor 10; LOC298528; RGD1562679; similar to Ephrin type-A receptor 10
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr85142,424,260 - 142,460,305 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl5142,424,296 - 142,460,305 (+)EnsemblGRCr8
mRatBN7.25137,139,588 - 137,175,637 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl5137,140,735 - 137,174,157 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx5139,844,289 - 139,878,891 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.05141,614,303 - 141,648,896 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.05141,621,479 - 141,656,077 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.05142,875,171 - 142,910,537 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl5142,875,773 - 142,908,395 (+)Ensemblrn6Rnor6.0
Rnor_5.05146,645,808 - 146,680,199 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.45144,228,301 - 144,248,902 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera5135,661,767 - 135,694,928 (+)NCBICelera
Cytogenetic Map5q36NCBI
JBrowse:




Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
dendrite  (IBA)
membrane  (IEA)
plasma membrane  (IBA,IEA)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. GOA pipeline RGD automated data pipeline
3. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:15777695   PMID:23376485  


Genomics

Comparative Map Data
Epha10
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr85142,424,260 - 142,460,305 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl5142,424,296 - 142,460,305 (+)EnsemblGRCr8
mRatBN7.25137,139,588 - 137,175,637 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl5137,140,735 - 137,174,157 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx5139,844,289 - 139,878,891 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.05141,614,303 - 141,648,896 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.05141,621,479 - 141,656,077 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.05142,875,171 - 142,910,537 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl5142,875,773 - 142,908,395 (+)Ensemblrn6Rnor6.0
Rnor_5.05146,645,808 - 146,680,199 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.45144,228,301 - 144,248,902 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera5135,661,767 - 135,694,928 (+)NCBICelera
Cytogenetic Map5q36NCBI
EPHA10
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38137,713,880 - 37,765,120 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl137,713,880 - 37,765,133 (-)Ensemblhg38GRCh38
GRCh37138,181,648 - 38,230,792 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36137,954,233 - 38,003,411 (-)NCBIBuild 36Build 36hg18NCBI36
Build 34137,895,050 - 37,899,882NCBI
Celera136,459,675 - 36,508,664 (-)NCBICelera
Cytogenetic Map1p34.3NCBI
HuRef136,298,901 - 36,347,866 (-)NCBIHuRef
CHM1_1138,297,768 - 38,346,680 (-)NCBICHM1_1
T2T-CHM13v2.0137,578,599 - 37,629,649 (-)NCBIT2T-CHM13v2.0
Epha10
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm394124,775,408 - 124,811,594 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl4124,774,692 - 124,811,593 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm384124,881,530 - 124,917,801 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl4124,880,899 - 124,917,800 (+)Ensemblmm10GRCm38
MGSCv374124,559,029 - 124,563,752 (+)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv364124,384,128 - 124,388,812 (+)NCBIMGSCv36mm8
Celera4123,204,101 - 123,208,828 (+)NCBICelera
Cytogenetic Map4D2.2NCBI
cM Map457.92NCBI
Epha10
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_00495545215,510,054 - 15,547,769 (-)NCBIChiLan1.0ChiLan1.0
EPHA10
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21189,073,633 - 189,125,323 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11188,202,754 - 188,254,402 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0136,987,683 - 37,038,611 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1138,335,783 - 38,375,186 (-)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl138,337,871 - 38,386,946 (-)EnsemblpanPan2panpan1.1
EPHA10
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1154,756,136 - 4,789,494 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha154,998,036 - 5,039,458 (+)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.0154,884,835 - 4,926,444 (+)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl154,884,877 - 4,926,453 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1154,744,492 - 4,785,852 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0154,810,975 - 4,852,222 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0154,827,371 - 4,868,788 (+)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Epha10
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440505854,091,884 - 54,128,201 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493647419,916,736 - 19,952,734 (-)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_00493647419,916,666 - 19,935,958 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
EPHA10
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl693,765,128 - 93,803,894 (-)EnsemblsusScr11Sscrofa11.1
Sscrofa11.1693,764,732 - 93,804,069 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
EPHA10
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12095,094,971 - 95,145,264 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2095,098,283 - 95,142,863 (+)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_02366603321,664,826 - 21,712,734 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Epha10
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462476420,441,465 - 20,480,421 (-)NCBIHetGla 1.0HetGla 1.0hetGla2
Epha10
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v1133,383,259 - 33,416,486 (-)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Epha10
151 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:117
Count of miRNA genes:86
Interacting mature miRNAs:102
Transcripts:ENSRNOT00000056496, ENSRNOT00000075431
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1331796Thshl2Thyroid stimulating hormone level QTL 22.3blood thyroid-stimulating hormone amount (VT:0005119)serum thyroid stimulating hormone level (CMO:0001248)5102105698152749382Rat
2303586Gluco52Glucose level QTL 522blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)5100826632145826632Rat
10053720Scort26Serum corticosterone level QTL 262.060.0147blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)5130249266172190305Rat
1549845Scl44Serum cholesterol level QTL 446blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)544924861153890773Rat
8552960Pigfal15Plasma insulin-like growth factor 1 level QTL 15blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)5116702075161702075Rat
1354583Despr3Despair related QTL34.980.0002locomotor behavior trait (VT:0001392)amount of time spent in voluntary immobility (CMO:0001043)5132930505172190305Rat
61444Strs2Sensitivity to stroke QTL 24.7cerebrum integrity trait (VT:0010549)post-insult time to onset of cerebrovascular lesion (CMO:0002343)5141212838172190305Rat
1300122Wbc1White blood cell count QTL 12.75leukocyte quantity (VT:0000217)total white blood cell count (CMO:0000365)5130678987145274255Rat
61452Ciaa5CIA Autoantibody QTL 53.5blood autoantibody amount (VT:0003725)calculated serum anti-rat type 2 collagen autoantibody titer (CMO:0001281)599905133172190305Rat
70156Niddm30Non-insulin dependent diabetes mellitus QTL 303.98blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)5134369218156289444Rat
8552908Pigfal4Plasma insulin-like growth factor 1 level QTL 46.6blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)5133789363172190305Rat
1331803Rf32Renal function QTL 322.798kidney blood vessel physiology trait (VT:0100012)absolute change in renal vascular resistance (CMO:0001900)5134369199172190305Rat
61393Bp7Blood pressure QTL 74.50.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)565089051166764498Rat
7794791Mcs33Mammary carcinoma susceptibility QTL 331.93mammary gland integrity trait (VT:0010552)mammary tumor incidence/prevalence measurement (CMO:0000946)5136631198172190305Rat
7207486Bss109Bone structure and strength QTL 109femur strength trait (VT:0010010)femur total energy absorbed before break (CMO:0001677)5112142946157142946Rat
7207481Bss106Bone structure and strength QTL 1067.9femur strength trait (VT:0010010)femur ultimate force (CMO:0001675)5112142946157142946Rat
1302790Scl20Serum cholesterol level QTL 206.40.0001blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)5110770739155770739Rat
1598861Cm64Cardiac mass QTL 642.9heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)5133081618172190305Rat
1578766Tcas11Tongue tumor susceptibility QTL 114.12tongue integrity trait (VT:0010553)number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)551657967166600247Rat
631505Bp103Blood pressure QTL 1033.2arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)5138002522170842766Rat
1549838Bss4Bone structure and strength QTL 49.2femur strength trait (VT:0010010)femur midshaft polar moment of inertia (CMO:0001669)5112142946157142946Rat
1581505Rf54Renal function QTL 54kidney physiology trait (VT:0002136)kidney 20-HETE level (CMO:0001854)5133270647172190305Rat
2317753Glom24Glomerulus QTL 243.1kidney glomerulus integrity trait (VT:0010546)kidney sclerotic glomeruli count to total glomeruli count ratio (CMO:0001269)5141764300172190305Rat
8694169Bw148Body weight QTL 14850.001body mass (VT:0001259)body weight gain (CMO:0000420)5133789363172190305Rat
8657050Bw146Body weight QTL 14619.840.001body mass (VT:0001259)body weight gain (CMO:0000420)598972960143972960Rat
1581510Cm54Cardiac mass QTL 543.40.05heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)5125969677172190305Rat
1576312Emca8Estrogen-induced mammary cancer QTL 84.1mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)555124766172190305Rat
2303618Vencon1Ventilatory control QTL 13.8respiration trait (VT:0001943)oxygen consumption (CMO:0002169)5100826632145826632Rat
2317056Wbc3White blood cell count QTL 32.510.01leukocyte quantity (VT:0000217)white blood cell count (CMO:0000027)5111236572156236572Rat
724525Bp147Blood pressure QTL 1474.30.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)5131708216172190305Rat
1598847Cm62Cardiac mass QTL 623.4heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)5114131300159131300Rat
2293642Bss37Bone structure and strength QTL 374.640.0001femur strength trait (VT:0010010)femur ultimate force (CMO:0001675)5125969677156302135Rat
7207488Bss110Bone structure and strength QTL 18.4femur strength trait (VT:0010010)femur stiffness (CMO:0001674)5112142946157142946Rat
8694441Bw169Body weight QTL 16917.610.001retroperitoneal fat pad mass (VT:0010430)retroperitoneal fat pad weight to body weight ratio (CMO:0000635)5116702075161702075Rat
7207491Bss112Bone structure and strength QTL 1127femur morphology trait (VT:0000559)femur midshaft cortical cross-sectional area (CMO:0001663)5112142946157142946Rat
8694389Bw160Body weight QTL 1606.170.001body lean mass (VT:0010483)lean tissue morphological measurement (CMO:0002184)5116702075161702075Rat
1354598Srn6Serum renin concentration QTL 63.8blood renin amount (VT:0003349)plasma renin activity level (CMO:0000116)574335621156302135Rat
8694198Abfw3Abdominal fat weight QTL 316.130.001visceral adipose mass (VT:0010063)abdominal fat pad weight to body weight ratio (CMO:0000095)5116702075161702075Rat
1298089Scl14Serum cholesterol level QTL 145.80.0004blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)5114131300159131300Rat
1598819Bp292Blood pressure QTL 2924.3arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)5133081618172190305Rat
7411722Strs6Sensitivity to stroke QTL 63.9cerebrum integrity trait (VT:0010549)percentage of study population developing cerebrovascular lesions during a period of time (CMO:0000932)5140258140143398122Rat
1358187Emca1Estrogen-induced mammary cancer QTL 14.4mammary gland integrity trait (VT:0010552)post-insult time to mammary tumor formation (CMO:0000345)5104262817153890625Rat

Markers in Region
34.MMHAP10FRD10.seq  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.25137,140,800 - 137,140,908 (+)MAPPERmRatBN7.2
Rnor_6.05142,875,827 - 142,875,934NCBIRnor6.0
Rnor_5.05146,646,447 - 146,646,554UniSTSRnor5.0
Celera5135,661,911 - 135,662,018UniSTS
Cytogenetic Map5q36UniSTS
RH137663  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.25137,144,350 - 137,144,512 (+)MAPPERmRatBN7.2
Rnor_6.05142,879,376 - 142,879,537NCBIRnor6.0
Rnor_5.05146,649,996 - 146,650,157UniSTSRnor5.0
Celera5135,665,448 - 135,665,609UniSTS
RH 3.4 Map5890.7UniSTS
Cytogenetic Map5q36UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
11 4 18 146 33 30 13 63 13 6 147 100 10 133 20 62 17 16 16

Sequence


Ensembl Acc Id: ENSRNOT00000056496   ⟹   ENSRNOP00000053334
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl5142,424,296 - 142,460,305 (+)Ensembl
mRatBN7.2 Ensembl5137,140,735 - 137,174,157 (+)Ensembl
Rnor_6.0 Ensembl5142,875,773 - 142,908,395 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000082120   ⟹   ENSRNOP00000068718
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 Ensembl5142,875,773 - 142,880,212 (+)Ensembl
RefSeq Acc Id: NM_001395095   ⟹   NP_001382024
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr85142,424,296 - 142,460,305 (+)NCBI
mRatBN7.25137,139,629 - 137,175,637 (+)NCBI
RefSeq Acc Id: XM_017593293   ⟹   XP_017448782
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr85142,424,260 - 142,443,973 (+)NCBI
mRatBN7.25137,139,588 - 137,159,303 (+)NCBI
Rnor_6.05142,875,171 - 142,894,220 (+)NCBI
Sequence:
RefSeq Acc Id: XM_039109629   ⟹   XP_038965557
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr85142,424,882 - 142,460,305 (+)NCBI
mRatBN7.25137,139,625 - 137,175,637 (+)NCBI
RefSeq Acc Id: XM_063287440   ⟹   XP_063143510
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr85142,439,111 - 142,460,305 (+)NCBI
RefSeq Acc Id: XR_005504408
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr85142,424,260 - 142,444,199 (+)NCBI
mRatBN7.25137,139,589 - 137,159,529 (+)NCBI
Protein Sequences
Protein RefSeqs NP_001382024 (Get FASTA)   NCBI Sequence Viewer  
  XP_017448782 (Get FASTA)   NCBI Sequence Viewer  
  XP_038965557 (Get FASTA)   NCBI Sequence Viewer  
  XP_063143510 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein EDL80410 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000053334
  ENSRNOP00000053334.6
RefSeq Acc Id: XP_017448782   ⟸   XM_017593293
- Peptide Label: isoform X3
- UniProtKB: A6IS59 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000068718   ⟸   ENSRNOT00000082120
Ensembl Acc Id: ENSRNOP00000053334   ⟸   ENSRNOT00000056496
RefSeq Acc Id: XP_038965557   ⟸   XM_039109629
- Peptide Label: isoform X1
- UniProtKB: F1LX55 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001382024   ⟸   NM_001395095
- Peptide Label: precursor
- UniProtKB: F1LX55 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063143510   ⟸   XM_063287440
- Peptide Label: isoform X2
Protein Domains
Eph LBD   Fibronectin type-III

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-F1LX55-F1-model_v2 AlphaFold F1LX55 1-1007 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1562679 AgrOrtholog
BioCyc Gene G2FUF-39945 BioCyc
Ensembl Genes ENSRNOG00000037340 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000056496 ENTREZGENE
  ENSRNOT00000056496.6 UniProtKB/TrEMBL
Gene3D-CATH 1.10.150.50 UniProtKB/TrEMBL
  2.60.40.10 UniProtKB/TrEMBL
  ephrin a2 ectodomain UniProtKB/TrEMBL
  Galactose-binding domain-like UniProtKB/TrEMBL
  Phosphorylase Kinase, domain 1 UniProtKB/TrEMBL
  Transferase(Phosphotransferase) domain 1 UniProtKB/TrEMBL
  Tumor Necrosis Factor Receptor, subunit A, domain 2 UniProtKB/TrEMBL
InterPro Eph_TM UniProtKB/TrEMBL
  Ephrin_rcpt_lig-bd_dom UniProtKB/TrEMBL
  Ephrin_rcpt_TKs UniProtKB/TrEMBL
  Fibronectin_type3 UniProtKB/TrEMBL
  FN3_sf UniProtKB/TrEMBL
  Galactose-bd-like UniProtKB/TrEMBL
  Ig-like_fold UniProtKB/TrEMBL
  Kinase-like_dom UniProtKB/TrEMBL
  Prot_kinase_cat_dom UniProtKB/TrEMBL
  SAM UniProtKB/TrEMBL
  SAM_type UniProtKB/TrEMBL
  Ser-Thr/Tyr_kinase UniProtKB/TrEMBL
  Tyr_kinase_ephrin_rcpt UniProtKB/TrEMBL
  Tyr_kinase_rcpt_V_CS UniProtKB/TrEMBL
NCBI Gene 298528 ENTREZGENE
PANTHER EPH RECEPTOR A5 UniProtKB/TrEMBL
  EPHRIN TYPE-A RECEPTOR 10 UniProtKB/TrEMBL
Pfam EphA2_TM UniProtKB/TrEMBL
  Ephrin_CRD UniProtKB/TrEMBL
  Ephrin_lbd UniProtKB/TrEMBL
  fn3 UniProtKB/TrEMBL
  Pkinase_Tyr UniProtKB/TrEMBL
  SAM_2 UniProtKB/TrEMBL
PhenoGen Epha10 PhenoGen
PIRSF TyrPK_ephrin_receptor UniProtKB/TrEMBL
PRINTS TYRKINASE UniProtKB/TrEMBL
PROSITE EPH_LBD UniProtKB/TrEMBL
  FN3 UniProtKB/TrEMBL
  PROTEIN_KINASE_DOM UniProtKB/TrEMBL
  RECEPTOR_TYR_KIN_V_1 UniProtKB/TrEMBL
  RECEPTOR_TYR_KIN_V_2 UniProtKB/TrEMBL
  SAM_DOMAIN UniProtKB/TrEMBL
RatGTEx ENSRNOG00000037340 RatGTEx
SMART EPH_lbd UniProtKB/TrEMBL
  Ephrin_rec_like UniProtKB/TrEMBL
  FN3 UniProtKB/TrEMBL
  SAM UniProtKB/TrEMBL
Superfamily-SCOP FN_III-like UniProtKB/TrEMBL
  Gal_bind_like UniProtKB/TrEMBL
  Kinase_like UniProtKB/TrEMBL
  SAM_homology UniProtKB/TrEMBL
UniProt A6IS59 ENTREZGENE, UniProtKB/TrEMBL
  F1LX55 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2008-12-01 Epha10  EPH receptor A10  RGD1562679  similar to Ephrin type-A receptor 10   Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-04-30 RGD1562679  similar to Ephrin type-A receptor 10   RGD1562679_predicted  similar to Ephrin type-A receptor 10 (predicted)  'predicted' is removed 2292626 APPROVED
2006-03-07 RGD1562679_predicted  similar to Ephrin type-A receptor 10 (predicted)  LOC298528  similar to Ephrin type-A receptor 10  Symbol and Name status set to approved 1299863 APPROVED
2006-02-09 LOC298528  similar to Ephrin type-A receptor 10      Symbol and Name status set to provisional 70820 PROVISIONAL