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Gene: Zfx (zinc finger protein X-linked) Rattus norvegicus

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Symbol:

Zfx

Name:

zinc finger protein X-linked

RGD ID:

1562664

Description:

Predicted to enable DNA-binding transcription activator activity, RNA polymerase II-specific; RNA polymerase II cis-regulatory region sequence-specific DNA binding activity; and chromatin insulator sequence binding activity. Predicted to be involved in positive regulation of transcription by RNA polymerase II. Predicted to act upstream of or within several processes, including oocyte development; ovarian follicle development; and parental behavior. Predicted to be located in chromatin. Predicted to be active in chromosome. Human ortholog(s) of this gene implicated in syndromic X-linked intellectual disability. Orthologous to human ZFX (zinc finger protein X-linked); INTERACTS WITH 17beta-estradiol; 6-propyl-2-thiouracil; amitrole.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

LOC367832; RGD1562664; similar to sex-determining protein Zfx - mouse; zinc finger X-chromosomal protein

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	ZFX (zinc finger protein X-linked)	HGNC	Ensembl, HomoloGene, NCBI, OrthoDB, Panther
Mus musculus (house mouse):	Zfx (zinc finger protein X-linked)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Zfx (zinc finger protein X-linked)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	ZFX (zinc finger protein X-linked)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	ZFX (zinc finger protein X-linked)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Zfx (zinc finger protein X-linked)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	ZFX (zinc finger protein X-linked)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	ZFX (zinc finger protein X-linked)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Zfx (zinc finger protein X-linked)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Zfx (zinc finger protein X-linked)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	ZFY (zinc finger protein Y-linked)	HGNC	OrthoDB
Homo sapiens (human):	RNF8 (ring finger protein 8)	HGNC	OMA
Alliance orthologs ³
Homo sapiens (human):	ZFX (zinc finger protein X-linked)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Zfx (zinc finger protein X-linked)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Zfa-ps (zinc finger protein, autosomal, pseudogene)	Alliance	DIOPT (Ensembl Compara\|OrthoFinder\|PhylomeDB)
Danio rerio (zebrafish):	zfx (zinc finger protein X-linked)	Alliance	DIOPT (Hieranoid\|OMA\|OrthoFinder)
Drosophila melanogaster (fruit fly):	ZIPIC	Alliance	DIOPT (InParanoid\|PANTHER)
Xenopus tropicalis (tropical clawed frog):	zfx	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	zfx	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PhylomeDB\|SonicParanoid)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	X	62,798,483 - 62,847,068 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	X	62,798,483 - 62,875,309 (-)	Ensembl				GRCr8
mRatBN7.2	X	58,804,690 - 58,853,155 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	X	58,804,691 - 58,853,265 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	X	60,242,347 - 60,291,471 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	X	63,743,468 - 63,792,591 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	X	61,294,490 - 61,343,654 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	X	63,158,368 - 63,204,971 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	X	63,158,976 - 63,204,530 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	X	63,749,779 - 63,797,636 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	X	81,430,210 - 81,477,028 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	X	59,240,896 - 59,287,404 (-)	NCBI		Celera
Cytogenetic Map	X	q22	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

syndromic X-linked intellectual developmental disorder 37 (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dimethylhydrazine (ISO)

17beta-estradiol (EXP)

2,3,7,8-tetrachlorodibenzodioxine (ISO)

2-deoxy-D-glucose (ISO)

4,4'-sulfonyldiphenol (ISO)

4-hydroxyphenyl retinamide (ISO)

6-propyl-2-thiouracil (EXP)

acrylamide (ISO)

aflatoxin B1 (ISO)

amitrole (EXP)

ammonium chloride (EXP)

amphotericin B (ISO)

antirheumatic drug (ISO)

aristolochic acid A (ISO)

arsenite(3-) (ISO)

benzo[a]pyrene (ISO)

benzo[a]pyrene diol epoxide I (ISO)

beta-lapachone (ISO)

bisphenol A (EXP)

bleomycin A2 (ISO)

bortezomib (ISO)

butanal (ISO)

cadmium dichloride (EXP,ISO)

CGP 52608 (ISO)

chloroacetaldehyde (ISO)

clodronic acid (ISO)

clofibrate (ISO)

copper(II) sulfate (ISO)

crocidolite asbestos (ISO)

cyclosporin A (ISO)

DDE (ISO)

fenthion (ISO)

flutamide (EXP)

folic acid (ISO)

formaldehyde (ISO)

fulvestrant (ISO)

furan (EXP)

geldanamycin (ISO)

hexadecanoic acid (ISO)

hydrogen peroxide (ISO)

irinotecan (ISO)

leflunomide (ISO)

methidathion (ISO)

methylmercury chloride (ISO)

N-Acetyl-S-(1,2-dichlorovinyl)-cysteine (ISO)

N-methylformamide (ISO)

ozone (ISO)

paracetamol (EXP)

propiconazole (EXP)

quercetin (ISO)

raloxifene (ISO)

resveratrol (ISO)

sodium arsenite (ISO)

sulfadimethoxine (EXP)

sunitinib (ISO)

thiram (ISO)

titanium dioxide (ISO)

trichostatin A (ISO)

tris(2-butoxyethyl) phosphate (ISO)

triticonazole (EXP)

valproic acid (ISO)

vinclozolin (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

DNA-templated transcription (IEA)

fertilization (ISO)

germ cell development (IEA,ISO)

homeostasis of number of cells (ISO)

multicellular organism growth (ISO)

oocyte development (ISO)

ovarian follicle development (ISO)

parental behavior (ISO)

positive regulation of transcription by RNA polymerase II (ISO)

post-embryonic development (ISO)

regulation of DNA-templated transcription (IEA)

regulation of transcription by RNA polymerase II (IBA)

spermatogenesis (ISO)

Cellular Component

chromatin (ISO)

nucleus (IBA,IEA)

Molecular Function

DNA binding (IEA)

DNA-binding transcription activator activity, RNA polymerase II-specific (IBA,ISO)

metal ion binding (IEA)

RNA polymerase II cis-regulatory region sequence-specific DNA binding (IBA,ISO)

zinc ion binding (IEA)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	GOA pipeline	RGD automated data pipeline
3.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:9187153	PMID:11214319

Genomics

Comparative Map Data

Zfx
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	X	62,798,483 - 62,847,068 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	X	62,798,483 - 62,875,309 (-)	Ensembl				GRCr8
mRatBN7.2	X	58,804,690 - 58,853,155 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	X	58,804,691 - 58,853,265 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	X	60,242,347 - 60,291,471 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	X	63,743,468 - 63,792,591 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	X	61,294,490 - 61,343,654 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	X	63,158,368 - 63,204,971 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	X	63,158,976 - 63,204,530 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	X	63,749,779 - 63,797,636 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	X	81,430,210 - 81,477,028 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	X	59,240,896 - 59,287,404 (-)	NCBI		Celera
Cytogenetic Map	X	q22	NCBI

ZFX
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	X	24,148,982 - 24,216,255 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	X	24,148,976 - 24,216,255 (+)	Ensembl			hg38	GRCh38
GRCh37	X	24,167,099 - 24,234,372 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	X	24,077,824 - 24,142,549 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	X	23,929,464 - 23,989,474	NCBI
Celera	X	28,291,063 - 28,357,675 (+)	NCBI		Celera
Cytogenetic Map	X	p22.11	NCBI
HuRef	X	21,911,587 - 21,977,093 (+)	NCBI		HuRef
CHM1_1	X	24,199,109 - 24,265,719 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	X	23,733,193 - 23,800,453 (+)	NCBI		T2T-CHM13v2.0

Zfx
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	X	93,118,237 - 93,194,250 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	X	93,118,237 - 93,167,308 (-)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	X	94,074,631 - 94,150,645 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	X	94,074,631 - 94,123,702 (-)	Ensembl			mm10	GRCm38
MGSCv37	X	91,319,970 - 91,368,746 (-)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	X	90,327,351 - 90,375,619 (-)	NCBI		MGSCv36	mm8
Celera	X	80,975,763 - 81,039,081 (-)	NCBI		Celera
Cytogenetic Map	X	C3	NCBI
cM Map	X	41.48	NCBI

Zfx
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955509	4,505,235 - 4,571,513 (+)	Ensembl
ChiLan1.0	NW_004955509	4,545,468 - 4,571,513 (+)	NCBI	ChiLan1.0	ChiLan1.0

ZFX
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	X	25,945,055 - 26,015,293 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	X	25,950,870 - 26,018,681 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	X	16,745,872 - 16,813,486 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	X	24,118,870 - 24,183,804 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	X	24,118,956 - 24,183,804 (+)	Ensembl			panPan2	panpan1.1

ZFX
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	X	19,722,172 - 19,793,059 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	X	19,760,045 - 19,790,196 (+)	Ensembl			canFam3	CanFam3.1
ROS_Cfam_1.0	X	19,654,055 - 19,750,307 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	X	19,691,983 - 19,750,306 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	X	19,692,562 - 19,787,144 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	X	19,726,301 - 19,820,841 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	X	19,782,461 - 19,877,301 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Zfx
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	X	12,680,909 - 12,740,663 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936624	416,753 - 472,030 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936624	417,164 - 471,638 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

ZFX
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	X	20,220,853 - 20,275,185 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	X	20,220,812 - 20,273,689 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	X	21,713,386 - 21,749,342 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

ZFX
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	X	22,626,683 - 22,630,119 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	Y	99,000 - 128,638 (+)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666056	24,506,189 - 24,574,127 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Zfx
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624897	503,399 - 551,579 (+)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624897	503,741 - 550,027 (+)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Zfx
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	X	51,993,507 - 52,036,827 (-)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Zfx
151 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	335
Count of miRNA genes:	218
Interacting mature miRNAs:	273
Transcripts:	ENSRNOT00000065194
Prediction methods:	Miranda, Pita, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
738035	Stresp1	Stress response QTL 1	4.96	0.000011	stress-related behavior trait (VT:0010451)	defensive burying - coping	X	45182909	117740458	Rat
70221	Bp56	Blood pressure QTL 56	4.9		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	X	61035856	67175160	Rat
1598837	Memor13	Memory QTL 13	3.2		exploratory behavior trait (VT:0010471)	difference between duration of physical contact or close proximity of test subject and social stimulus during sample phase and test phase (CMO:0002678)	X	44930883	89930883	Rat

Markers in Region

D5Mit8

Rat Assembly	Chr	Position (strand)	Source	JBrowse
GRCr8	X	80,876,645 - 80,876,775 (+)	Marker Load Pipeline
Rnor_6.0	X	82,981,120 - 82,981,241	NCBI	Rnor6.0
Rnor_5.0	X	82,950,219 - 82,950,340	UniSTS	Rnor5.0
RGSC_v3.4	X	100,103,660 - 100,103,789	UniSTS	RGSC3.4
Celera	X	77,996,730 - 77,996,859	UniSTS
RGSC_v3.1	X	100,177,092 - 100,177,222	RGD
RH 3.4 Map	X	736.2	UniSTS
Cytogenetic Map	X	q31	UniSTS

DXMit6

Rat Assembly	Chr	Position (strand)	Source	JBrowse
GRCr8	X	62,846,775 - 62,846,987 (+)	Marker Load Pipeline
mRatBN7.2	X	58,852,990 - 58,853,201 (+)	MAPPER	mRatBN7.2
Rnor_6.0	X	63,204,761 - 63,204,971	NCBI	Rnor6.0
Rnor_5.0	X	63,797,402 - 63,797,612	UniSTS	Rnor5.0
RGSC_v3.4	X	81,478,146 - 81,478,357	RGD	RGSC3.4
RGSC_v3.4	X	81,478,147 - 81,478,357	UniSTS	RGSC3.4
Celera	X	59,288,523 - 59,288,733	UniSTS
RGSC_v3.1	X	100,177,092 - 100,177,222	RGD
RH 3.4 Map	X	736.2	RGD
Cytogenetic Map	X	q31	UniSTS

DXRat65

Rat Assembly	Chr	Position (strand)	Source	JBrowse
GRCr8	X	62,878,401 - 62,878,658 (+)	Marker Load Pipeline
mRatBN7.2	X	58,884,617 - 58,884,874 (+)	MAPPER	mRatBN7.2
Rnor_6.0	X	63,237,001 - 63,237,257	NCBI	Rnor6.0
Rnor_5.0	X	63,829,641 - 63,829,897	UniSTS	Rnor5.0
RGSC_v3.4	X	81,510,396 - 81,510,652	UniSTS	RGSC3.4
RGSC_v3.4	X	81,510,395 - 81,510,704	RGD	RGSC3.4
Celera	X	59,320,326 - 59,320,582	UniSTS
RGSC_v3.1	X	81,583,688 - 81,583,944	RGD
RH 3.4 Map	4	1029.28	UniSTS
RH 3.4 Map	4	1029.28	RGD
SHRSP x BN Map	X	17.21	RGD
SHRSP x BN Map	X	17.21	UniSTS
Cytogenetic Map	X	q31	UniSTS

RH132649

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	X	58,804,973 - 58,805,153 (+)	MAPPER	mRatBN7.2
Rnor_6.0	X	63,158,652 - 63,158,831	NCBI	Rnor6.0
Rnor_5.0	X	63,750,063 - 63,750,242	UniSTS	Rnor5.0
RGSC_v3.4	X	81,429,886 - 81,430,065	UniSTS	RGSC3.4
Celera	X	59,240,572 - 59,240,751	UniSTS
Cytogenetic Map	X	q31	UniSTS

AW531358

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	X	58,805,620 - 58,805,813 (+)	MAPPER	mRatBN7.2
Rnor_6.0	X	63,159,299 - 63,159,491	NCBI	Rnor6.0
Rnor_5.0	X	63,750,710 - 63,750,902	UniSTS	Rnor5.0
RGSC_v3.4	X	81,430,533 - 81,430,725	UniSTS	RGSC3.4
Celera	X	59,241,219 - 59,241,411	UniSTS
Cytogenetic Map	X	q31	UniSTS

mZfa

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	X	58,809,083 - 58,809,544 (+)	MAPPER	mRatBN7.2
Rnor_6.0	X	63,162,762 - 63,163,222	NCBI	Rnor6.0
Rnor_5.0	X	63,754,173 - 63,754,633	UniSTS	Rnor5.0
RGSC_v3.4	X	81,433,996 - 81,434,456	UniSTS	RGSC3.4
Celera	X	59,244,682 - 59,245,142	UniSTS
Cytogenetic Map	X	q31	UniSTS

PMC262401P2

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	X	58,852,985 - 58,853,209 (+)	MAPPER	mRatBN7.2
Rnor_6.0	X	63,204,756 - 63,204,979	NCBI	Rnor6.0
Rnor_5.0	X	63,797,397 - 63,797,620	UniSTS	Rnor5.0
RGSC_v3.4	X	81,478,142 - 81,478,365	UniSTS	RGSC3.4
Celera	X	59,288,518 - 59,288,741	UniSTS
Cytogenetic Map	X	q31	UniSTS

Expression

RNA-SEQ Expression

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alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	165	91	90	59	92	59	6	356	192	11	144	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001109017	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006257030	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006257031	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006257032	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008773265	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017602121	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039099945	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039099946	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039099947	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063280177	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063280178	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063280179	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AY012054	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473966	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ107392	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000021	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	X75171	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000065194 ⟹ ENSRNOP00000060490

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0 Ensembl	X	63,158,976 - 63,203,643 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000075866

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0 Ensembl	X	63,165,407 - 63,165,978 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000076175 ⟹ ENSRNOP00000068277

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	X	62,798,483 - 62,846,709 (-)	Ensembl
mRatBN7.2 Ensembl	X	58,804,691 - 58,852,924 (-)	Ensembl
Rnor_6.0 Ensembl	X	63,159,731 - 63,204,530 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000076613 ⟹ ENSRNOP00000068137

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	X	62,798,483 - 62,875,309 (-)	Ensembl
mRatBN7.2 Ensembl	X	58,804,691 - 58,853,265 (-)	Ensembl
Rnor_6.0 Ensembl	X	63,160,839 - 63,182,385 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000076765 ⟹ ENSRNOP00000068521

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	X	62,801,655 - 62,846,709 (-)	Ensembl
mRatBN7.2 Ensembl	X	58,808,863 - 58,852,924 (-)	Ensembl
Rnor_6.0 Ensembl	X	63,162,480 - 63,165,759 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000076974 ⟹ ENSRNOP00000068150

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0 Ensembl	X	63,178,249 - 63,203,643 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000149886 ⟹ ENSRNOP00000112832

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	X	62,798,483 - 62,846,709 (-)	Ensembl

RefSeq Acc Id:

NM_001109017 ⟹ NP_001102487

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	62,798,483 - 62,846,709 (-)	NCBI
mRatBN7.2	X	58,804,690 - 58,852,924 (-)	NCBI
Rnor_6.0	X	63,158,976 - 63,203,643 (-)	NCBI
Rnor_5.0	X	63,749,779 - 63,797,636 (-)	NCBI
RGSC_v3.4	X	81,430,210 - 81,477,028 (-)	RGD
Celera	X	59,240,896 - 59,287,404 (-)	RGD

Sequence:

show sequence

CGGCGGCGCTGGCTACGGGTACCGGAGCCCGGGCGCGGCGTCGAGTGTGCGCGCAGGGGCGTGT
TCGCTCCCCATGGCGGCCATTGCCCTCGTCGCCATGATGAGCACTTGGATTCCAGGCGCTTGGC
GGCAGCGCCACCTTCCTGCCCAGCCTCCCACAGCCCCGTGACTGGCTGCTGTTTCCGCTGTATT
TCAACTCAGCTGCCGCAGGCGGCCATCGCGGCTGTCTTGGCGCCGGAGCCACCTCATCCGTATT
GCCCCGGGGCTTCGAGCCTTTCCCTGGCGCTTGCTGCCGCTTCAGGTTGATCTGCAGCGGCGGC
AGTAGTGGAGCCGGAGACATTTTATTATTACTTTATTTCCTCAGAGGTGCGTATAACTGTGCCC
AGCTAACCTTGTAAGATGAATTGGGGAGCATTCCCTCTTTTTTGAAACAGGTGTTCTGGCTGAT
GAGAATTTAAAGGCCATGGATGAAGATGGACTTGAATTACAACCACAAGCACCAAACTCATTTT
TTGATGCAACAGGAGCTGGTGCTACACACATGGATGGAAATCAAATTGTTGTGGAAGTACAAGA
AACGGTTTATGTGTCAGATGTTGTGGATTCAGACATAACCGTTCATAACTACGTTCCCGATGAC
CCAGACTCAGTTGTAATCCAAGATGTTATTGAGGATGTTGTTATAGAAGATGTCCAATGTACAG
ATATCATGGACGAAGCAGATGTGTCCGAAACAGTCATCATCCCTGAACAAGTCCTGGATTCAGA
TGTAACCGAAGAAGTTTCTTTAACGCATTGCACAGTTCCAGATGATGTTTTAGCTTCCGATATT
ACTTCAGCCTCAATATCTATGCCTGAACATGTCTTGACAAGTGAATCTATACATGTGTCTGACG
TTAGTCACGTTGAACATGTGGTTCATGATAGTGTAGTAGAAGCAGAAATCGTCACAGATCCTCT
GACCGCTGATGTTGTTTCGGAAGAAGTGCTGGTAGCAGACTGTGCCTCTGAAGCAGTCATAGAT
GCCAACGGGGTCCCTGTGAACCAGCAGGATGAAGACAAAGCCAACTGTGAGGACTACCTTATGA
TCTCTTTGGATGATGCTGGTAAAATAGAACATGATGGTTCATCTGGACTGACTATGGACAACGA
AACAGAAATTGATCCTTGTAAAGTGGATGGCACTTGCCCTGAAGTCATCAAGGTGTACATTTTT
AAAGCTGATCCTGGAGAAGATGACTTAGGTGGAACCGTAGACATTGTGGAAAGCGAGCCTGAGA
ACGAGCATGGGGTTGAACTGCTTGATCCAAACAACAGTATGCGTGTTCCCAGAGAAAAGATGGT
TTATATGGCTGTTAATGACACTCAGCAAGAAGAGGAAGAATTGAATGTTGCTGAAATTGCTGAT
GAAGTTTATATGGAAGTGATTGTTGGAGAGGAGGATGCTGCAGCCGCAGCTGCAGCCGCAGTGC
ATGAACAGCAAGTGGAGGACAACGAAATGAAAACCTTCATGCCGATTGCGTGGGCAGCTGCTTA
CGGTAATAATTCTGATGGAATTGAAAACCGGAATGGCACTGCAAGTGCCCTCTTGCACATAGAT
GAGTCTGCTGGCCTCGGCAGACTGGCTAAACAAAAACCAAAGAAAAGGAGAAGACCTGATTCCA
GGCAGTACCAAACAGAATCATCTACAATCAGTACAGAACAAATGATTGGACTATTTAACATATA
TTTTTTTAAATAAACTGAAAAATAAGGAACACAACACTTTACATACTTTATATTTCTCTTTACA
TAATCTGGAACCACACGCAGTTCTTTTCTTTTTAAAGCACAATATTGAAGCCTTTAAAAGGTAT
TTAAGGGTTTGGTCAAGTGAATAGAAAATGTGTCTGTATAAAAAGAAAATGAAGTAGTCACTGT
TATGTACTGACATTAGTTACAACCTAGTTTTAATTCTTAAAACAATTTTGATTAGCAAAGCTAA
AAAAGGATGTTTCAGTTAAATGTTTTAAAGAGGTACAGATTTTTACAAGGACATAATATAAGTT
ATTGTTCTGTAGAAATATCCTATTAAATATTGTATGTCCCTCCCTCTGTATACTTTGTAAAAAA
AGTAAAATACATAAAAAGGAAATCATATAGGGGATGTGTGACATTATTGTAATTGTGTACTTGA
GAATAACGTGCAAAAATAAAAATCAGAATATTTTCCTGTTAACGAATGTTCAGTCTATTTGATA
CCAGTACTAAGTTAAAGCTTTTTCTTAAGAAAGAAAATGTACAGTTTTTGTAAACCTAATAAAC
ATCAAAAGCAGTGGATTATTTTCATCCCCTATTTCTTAATTCCTTTTATGCAGCAGTGGAATGC
AAAGTGCTTGGTTGCTTTGAATTTTGTGACTTGGATGCAAATACTGATATTTCAGTCCTGTGAA
TTTGCAAGTAACATTGAGAAGTTAAGAGGTGATTGGTGAGTCCTTTGATGAGCATGTCCTTGAA
ATTCATTTTTTCCTTTATCTCTGTAAATGGTTCGTTTTATTAGCATCTGATTCCTGTTATAAAT
TGCCCATCCATAAAGTGGGTTTTGAAAGCACTTAAGATTTGTTTTATTATCAATTCATAACAAA
TTTAGTCTGAGGTCCTACCTTAAGTTCCCCATTTGTGCCCAGGTTAGATGCCTCTAGTAGACTC
AAATCTTGGAGGATGGTCACTGTGGTAGTGAAAGTCAGGAATCCTGAGAGATGTGCAGCACTTC
GATTTTAACAATGAGATTCTGTAATCCAGAAACTAGTGTTGGTCTAAGAGAGCTGAGATGACAA
GTAGCCAAAACTTGAGGTACATGTCTATGAGAATGTGGTGGACGTCAGTCAAGTCAGTCAGTCA
CGAGTCTGAGAAAACCTGATCTCACTCATTCTGCTAAAATGTGCTGCCCTATTGTCGCTGGGGA
TCTCTGTATTAATTTCCTGCAAAATCTTACGTTTGTGTAAGGAAACGCAAGATCAGTCAGCATC
TTAAAGAGAATCCATGACAGAATAATGCCTGTCAGCAAGGTAGTCTGCCCTCTTAGTCCAGTCC

hide sequence

RefSeq Acc Id:

XM_006257030 ⟹ XP_006257092

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	62,798,483 - 62,847,068 (-)	NCBI
mRatBN7.2	X	58,804,690 - 58,853,155 (-)	NCBI
Rnor_6.0	X	63,158,368 - 63,204,971 (-)	NCBI
Rnor_5.0	X	63,749,779 - 63,797,636 (-)	NCBI

Sequence:

show sequence

ACCATTCAAATTGGCAAGCCCATTTTCATTTTGTTTCAAAGTTGTTTTTTTTAAGGGAAGACAG
GGGACGGCGAGGGTTGCTAAATTTATCTTCATCCCCAGGCACCGGGGATGAAAACACACACACA
TACACACACAGCACAGCACACACACACACACACACATTTACGGCGGGAGGGGGGTCTGAGGGCC
TGCAAACAACTCGAGCCACCGCCTCAGGCCAGGACCCTCGCGGAGAGGCGGTGCGTATAACTGT
GCCCAGCTAACCTTGTAAGATGAATTGGGGAGCATTCCCTCTTTTTTGAAACAGGTGTTCTGGC
TGATGAGAATTTAAAGGCCATGGATGAAGATGGACTTGAATTACAACCACAAGCACCAAACTCA
TTTTTTGATGCAACAGGAGCTGGTGCTACACACATGGATGGAAATCAAATTGTTGTGGAAGTAC
AAGAAACGGTTTATGTGTCAGATGTTGTGGATTCAGACATAACCGTTCATAACTACGTTCCCGA
TGACCCAGACTCAGTTGTAATCCAAGATGTTATTGAGGATGTTGTTATAGAAGATGTCCAATGT
ACAGATATCATGGACGAAGCAGATGTGTCCGAAACAGTCATCATCCCTGAACAAGTCCTGGATT
CAGATGTAACCGAAGAAGTTTCTTTAACGCATTGCACAGTTCCAGATGATGTTTTAGCTTCCGA
TATTACTTCAGCCTCAATATCTATGCCTGAACATGTCTTGACAAGTGAATCTATACATGTGTCT
GACGTTAGTCACGTTGAACATGTGGTTCATGATAGTGTAGTAGAAGCAGAAATCGTCACAGATC
CTCTGACCGCTGATGTTGTTTCGGAAGAAGTGCTGGTAGCAGACTGTGCCTCTGAAGCAGTCAT
AGATGCCAACGGGGTCCCTGTGAACCAGCAGGATGAAGACAAAGCCAACTGTGAGGACTACCTT
ATGATCTCTTTGGATGATGCTGGTAAAATAGAACATGATGGTTCATCTGGACTGACTATGGACA
ACGAAACAGAAATTGATCCTTGTAAAGTGGATGGCACTTGCCCTGAAGTCATCAAGGTGTACAT
TTTTAAAGCTGATCCTGGAGAAGATGACTTAGGTGGAACCGTAGACATTGTGGAAAGCGAGCCT
GAGAACGAGCATGGGGTTGAACTGCTTGATCCAAACAACAGTATGCGTGTTCCCAGAGAAAAGA
TGGTTTATATGGCTGTTAATGACACTCAGCAAGAAGAGGAAGAATTGAATGTTGCTGAAATTGC
TGATGAAGTTTATATGGAAGTGATTGTTGGAGAGGAGGATGCTGCAGCCGCAGCTGCAGCCGCA
GTGCATGAACAGCAAGTGGAGGACAACGAAATGAAAACCTTCATGCCGATTGCGTGGGCAGCTG
CTTACGGTAATAATTCTGATGGAATTGAAAACCGGAATGGCACTGCAAGTGCCCTCTTGCACAT
AGATGAGTCTGCTGGCCTCGGCAGACTGGCTAAACAAAAACCAAAGAAAAGGAGAAGACCTGAT
TCCAGGCAGTACCAAACAGCAATAATTATTGGCCCAGATGGACATCCTCTCACTGTCTACCCTT
GCATGATTTGTGGCAAGAAGTTTAAATCGAGAGGTTTCTTAAAAAGACACATGAAAAACCATCC
TGAACACCTTGCCAAGAAAAAGTACCGCTGTACTGACTGTGATTACACTACCAACAAGAAGATA
AGTTTACACAATCACCTGGAGAGCCACAAGCTAACCAGCAAGGCAGAGAAAGCCATAGAATGCG
ATGAGTGTGGAAAGCATTTCTCTCATGCTGGGGCTTTGTTTACTCATAAAATGGTGCATAAGGA
AAAAGGAGCCAACAAGATGCACAAGTGTAAGTTCTGTGAATATGAAACAGCTGAACAAGGCCTA
TTGAATCGCCACCTTTTGGCAGTCCACAGCAAGAATTTTCCTCATATTTGTGTAGAGTGTGGCA
AAGGTTTCCGTCATCCATCAGAGCTCAAAAAGCACATGCGAATCCATACTGGAGAAAAGCCCTA
TGAATGCCAGTACTGCGAATACAGGTCCGCAGATTCTTCTAACTTGAAAACACATGTAAAAACT
AAGCATAGTAAAGAGATGCCATTCAAGTGTGACATTTGTCTTCTGACTTTCTCAGATACCAAAG
AGGTGCAACAACATGCTCTTATCCATCAAGAGAGCAAAACTCACCAGTGTTTGCATTGTGACCA
CAAGAGTTCAAACTCAAGTGATTTGAAGCGACACATAATTTCAGTTCATACTAAGGACTATCCT
CATAAGTGTGACATGTGCGATAAAGGCTTTCACAGGCCTTCAGAACTCAAGAAACATGTGGCTG
CCCACAAGGGTAAAAAAATGCACCAGTGTAGACATTGTGACTTTAAGATTGCAGATCCGTTTGT
ACTAAGTCGCCATATTCTCTCGGTTCATACAAAGGACCTTCCATTTAGGTGTAAGAGATGTAGA
AAGGGATTTCGGCAACAAAGTGAGCTTAAAAAGCATATGAAGACCCACAGTGGCCGGAAGGTAT
ATCAGTGTGAGTACTGTGAATATAGCACTACAGATGCGTCAGGCTTTAAGCGGCACGTTATCTC
CATTCATACGAAAGACTATCCTCACCGCTGTGAGTACTGCAAGAAAGGATTCCGAAGACCCTCG
GAAAAGAACCAGCACATAATGCGACATCATAAAGAAGTTGGCCTGCCCTAACCGTACTCTTCAC
AGCTGTTTGTAGAGAAACTGGCCTTGAAACAGAAAATTCATTTAAAAGCCAATCAGTCTTGTTC
ACTTACAATACTGTATATTGATTTATGCTGTGTACAAATAGGATTATTGCTTCTAGTTGACTTT
GTTTTTACGTTTTGTTCAATAGTGTGTTCTGAATTCTATTCAGTTTGTTTAATACATGGGAAAA
AGCAGCAACAAGTTAGTTGCTTTTACTAAAGTAATCCCTGATTCTATACTGAAGTTTTCTATCT
TAGAAGTTTTATATTTATTTTAAAATATTTACCTTGCTTACCTTGATGGTACTCTTGTAAGACC
AGTTAACTCATGGTAACTCTGCAGTGGTAACTGAAAGGATTCATGTGGACTTTTTGTCTCACAA
ATTTCTCACAATTAAATCGTCAGAGACATCTAATGGAATGGGAGATTTTTGTATGGTGAGGTCT
CATGATAGTAACATGGAAGTCATTTATTTGTCTTGTTTAGTATTGTAGACTGTATGACAATGAA
AGTTTTCATATGAACTTTTGTGTCCCCAGCATCGCTGCGTAAAAGAGCAGTGGCTGGGTTTGTG
TTTACTTTTCTTTTTGATTTTTTTTTTCCTTTTTAGTGGAGAAAATATACTTTTTTTTTCCTTT
AGACTCTTTACATCTTTTGTCAGTGTAGTAAACTTTTAGAAAACCTTGTTGGAAATTTTTGCTT
GATCTTGTTGTATTTTGATTATTTTATCTGTGCTGCTTTGTCTTGGAATGGTTGTGTGCTCCAA
ATGAAATTTAACTGAAGACTGCATTTTGGAATCTCCTAGGGGTAACTTGTGGCTCATAGGATCT
TTTGCAACTTTATATATGTAAATGTACCCTGAATTATATATATCTATCTATATATACACATATA
TATGTAACATGTATCTGTGTGTATTGCTTATTTTACATACTTATACACACAACCCCCAGTAGTA
GTTCTTTAAAATCTATAATGAAAAGTATTAAATTTACAGAAACGTGAAAGATCCAGGGATGCAT
GAGAGAGCATTTTGTAAGTCTTGCTCTTCAGAGAGACTACTCAGGTGAAGAATTAGAAGGAAAA
TAAGGACACTAGTATTTTTAAAGAGTAAAGGTATTTTCTTTTAAATATCTTTGGTAATTGAAAA
ATAATTGAAAAATAGAGGTTAAGATGTTTATAGATACAATGTTTTCATACAGTTTCAACTCCAT
GCCTTTATATTTTTCTGAAAAGCTAATGGGTATCCAGACATGAATCCCCCAGTTCTCTCTGATA
AGCCGGAGAGAGAGCTCTTGTCTGACCAAGCGAGGGAGACAGAAAGGGAGTGATGGCTCCATGG
ACCAGAGAACGGGTGCTAATAAGGACTTAGACTTGGCTAATTGAGCCTGCTCTGTTAGTTCTTA
GTTAACTTGAAAAACTTAACACTCGCTTGTCTTGGATTACATGATAGAGGTGTAGTCCAAGTGT
GTGAACAGTCTGAGGCCTCACTCGGATCCTCACTAAGTCTTTCACAGTTTTGCTTTTGAGAGCT
GGCAATTCGTAACATACAGGTCTGATCGCTGATGAAATTTGTAAAAATAAGTTGGACATTAAGA
GTTTTGTTAAGATGTCTTTTTGGAAAACAGTTTCTAGAGTCCCTGGAATTGGCTGTTGGCACAC
GGGTCTGGCACATCACGGGAAACTTAGAAGTTTCTTCCCACTCGATAGCTGCCTTGCTGCCTCA
TTATGGTGCTCCATCCCTTTCGTGCCGTTAGTTTTTACCTTCCACCCTTCTCTTTGTCATCAAG
ATTTGTATTCAAAAGTTATATTTTTGGGGTTAGATGTCTTGAGTATTTGGTGTTTGGCAAACCT
CTGAAGTGCTAGATTGATTTAGTCTAGTTCTAAATCAAATTCTTAAGGCTGGTATGAACTCCAT
TCTCAATGCCAGTCAATGCCAAGGCATGGATTCCCTAGACTTTCCATCTGATAAGGGAATCATT
TTGCCTTTGTAGCCTCCGCAATGTGCTTTAAAAAATACATCATAACTATGATTTGTTTTATTGC
CCTGTTATTCTTGAAAGCTGTCCTTTTTTTGTGAGAACTTTTAAAATCTACTTTATTATTTTCC
CCAGAAGTAACGTAAAACACCTAACATTGAAATTTATGAAATTTAAAAATCATCTACAATCAGT
ACAGAACAAATGATTGGACTATTTAACATATATTTTTTTAAATAAACTGAAAAATAAGGAACAC
AACACTTTACATACTTTATATTTCTCTTTACATAATCTGGAACCACACGCAGTTCTTTTCTTTT
TAAAGCACAATATTGAAGCCTTTAAAAGGTATTTAAGGGTTTGGTCAAGTGAATAGAAAATGTG
TCTGTATAAAAAGAAAATGAAGTAGTCACTGTTATGTACTGACATTAGTTACAACCTAGTTTTA
ATTCTTAAAACAATTTTGATTAGCAAAGCTAAAAAAGGATGTTTCAGTTAAATGTTTTAAAGAG
GTACAGATTTTTACAAGGACATAATATAAGTTATTGTTCTGTAGAAATATCCTATTAAATATTG
TATGTCCCTCCCTCTGTATACTTTGTAAAAAAAGTAAAATACATAAAAAGGAAATCATATAGGG
GATGTGTGACATTATTGTAATTGTGTACTTGAGAATAACGTGCAAAAATAAAAATCAGAATATT
TTCCTGTTAACGAATGTTCAGTCTATTTGATACCAGTACTAAGTTAAAGCTTTTTCTTAAGAAA
GAAAATGTACAGTTTTTGTAAACCTAATAAACATCAAAAGCAGTGGATTATTTTCATCCCCTAT
TTCTTAATTCCTTTTATGCAGCAGTGGAATGCAAAGTGCTTGGTTGCTTTGAATTTTGTGACTT
GGATGCAAATACTGATATTTCAGTCCTGTGAATTTGCAAGTAACATTGAGAAGTTAAGAGGTGA
TTGGTGAGTCCTTTGATGAGCATGTCCTTGAAATTCATTTTTTCCTTTATCTCTGTAAATGGTT
CGTTTTATTAGCATCTGATTCCTGTTATAAATTGCCCATCCATAAAGTGGGTTTTGAAAGCACT
TAAGATTTGTTTTATTATCAATTCATAACAAATTTAGTCTGAGGTCCTACCTTAAGTTCCCCAT
TTGTGCCCAGGTTAGATGCCTCTAGTAGACTCAAATCTTGGAGGATGGTCACTGTGGTAGTGAA
AGTCAGGAATCCTGAGAGATGTGCAGCACTTCGATTTTAACAATGAGATTCTGTAATCCAGAAA
CTAGTGTTGGTCTAAGAGAGCTGAGATGACAAGTAGCCAAAACTTGAGGTACATGTCTATGAGA
ATGTGGTGGACGTCAGTCAAGTCAGTCAGTCACGAGTCTGAGAAAACCTGATCTCACTCATTCT
GCTAAAATGTGCTGCCCTATTGTCGCTGGGGATCTCTGTATTAATTTCCTGCAAAATCTTACGT
TTGTGTAAGGAAACGCAAGATCAGTCAGCATCTTAAAGAGAATCCATGACAGAATAATGCCTGT
CAGCAAGGTAGTCTGCCCTCTTAGTCCAGTCCTCAGGGAAGTGGGACAAGGCATGAGCCCCGGC
AGCCTTTAATTCTGCTGCCTGCTCAACTTCAGTGATAGTGATCTTAGAGCACTTGAGGAGCCTA
AAGATTACTTAGGTGATGGTTCGTGTAGTAGTCAAGAAGCTCACCAAAAGCAGCTAGTGATGGC
ACAGTGAGAGTAAGTTAGAATCCAGAGACTTTTTGGCTTTACCGTTTTTGTAAAAGTCTTGAGT
CCTATCAGTCACTAAGTACATCCTTCAGTGCACATCTGAACAGCTTGTACCTCCTACTCTTACG
TAGCCCCCAATGTTGCATTCCTCAAACACAGGAAGACTTGATAAGTAAAGAGAAGGACTGAAAA
TTGTGTGTTCTCGTGTGTGTTTAATTGGCCCAGAGTTACTAAGGTAATTCATATTAAAAAGGAC
ATTTTGCTGCATTTTACAACTTTTTAGGAGGTCAAAGTTAAGTTTGCCCTATGAATTTTGTTTT
TATCTTTTGTTTCATGTATATATTGTTTGCCTTTTTCATAAAAATAATTCTTGGATTTGTTATA
TATTGTTCCTGTTATTTTTGACATCTTTGCTATTGTAAATAAATTCCTATTTTGTTTTAAGTTA

hide sequence

RefSeq Acc Id:

XM_006257032 ⟹ XP_006257094

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	62,798,483 - 62,846,733 (-)	NCBI
mRatBN7.2	X	58,804,690 - 58,852,916 (-)	NCBI
Rnor_6.0	X	63,158,368 - 63,204,694 (-)	NCBI
Rnor_5.0	X	63,749,779 - 63,797,636 (-)	NCBI

Sequence:

show sequence

GGCCCACAAACATGGTGGGGGGTGGCCCGGGCCTCCCGCCTCTCGACGGGGTCGGCGGACCACG
GCCTCGTGCGGACTTTACGCCGAGGCGGCGGTGGCAGCGGCGTGTGTGTGGCAGCGGTGGCGGG
CGGGAGCGCGGAGGTGGAAAGAAGGGGGGCGCTGTCACGGAAACTCAGGCCGCCCGAGACCCCG
CCGCAGCGAGGCCACGGGGCTCCCCGGTTGCGGGGCGTGAACGGTGCCAACCCGGGGCGTCAGA
GGGACCCACCGGGCGGAGGAGGGGGCCCATCTATCCTTCCGCATTTTCCTGGGTCTCTCTCCCC
GGCGGTGACGTGACGTGCTGACGGCGGGCCCGTGCCGGGGAGCTGGGCCGCTTTTTGTCAGCTC
CGAGCTCGGCCCCTCCTCCCTCCCTCCGCCCGCCCCACCAGCCGGAGCCCGGCCCAGTGCTCCA
GAGAAAGGCCGGCCTGCAGCACCCGCCACCGTCGCCGACCGCCGCACGACTGTCCGGTGCGTAT
AACTGTGCCCAGCTAACCTTGTAAGATGAATTGGGGAGCATTCCCTCTTTTTTGAAACAGGTGT
TCTGGCTGATGAGAATTTAAAGGCCATGGATGAAGATGGACTTGAATTACAACCACAAGCACCA
AACTCATTTTTTGATGCAACAGGAGCTGGTGCTACACACATGGATGGAAATCAAATTGTTGTGG
AAGTACAAGAAACGGTTTATGTGTCAGATGTTGTGGATTCAGACATAACCGTTCATAACTACGT
TCCCGATGACCCAGACTCAGTTGTAATCCAAGATGTTATTGAGGATGTTGTTATAGAAGATGTC
CAATGTACAGATATCATGGACGAAGCAGATGTGTCCGAAACAGTCATCATCCCTGAACAAGTCC
TGGATTCAGATGTAACCGAAGAAGTTTCTTTAACGCATTGCACAGTTCCAGATGATGTTTTAGC
TTCCGATATTACTTCAGCCTCAATATCTATGCCTGAACATGTCTTGACAAGTGAATCTATACAT
GTGTCTGACGTTAGTCACGTTGAACATGTGGTTCATGATAGTGTAGTAGAAGCAGAAATCGTCA
CAGATCCTCTGACCGCTGATGTTGTTTCGGAAGAAGTGCTGGTAGCAGACTGTGCCTCTGAAGC
AGTCATAGATGCCAACGGGGTCCCTGTGAACCAGCAGGATGAAGACAAAGCCAACTGTGAGGAC
TACCTTATGATCTCTTTGGATGATGCTGGTAAAATAGAACATGATGGTTCATCTGGACTGACTA
TGGACAACGAAACAGAAATTGATCCTTGTAAAGTGGATGGCACTTGCCCTGAAGTCATCAAGGT
GTACATTTTTAAAGCTGATCCTGGAGAAGATGACTTAGGTGGAACCGTAGACATTGTGGAAAGC
GAGCCTGAGAACGAGCATGGGGTTGAACTGCTTGATCCAAACAACAGTATGCGTGTTCCCAGAG
AAAAGATGGTTTATATGGCTGTTAATGACACTCAGCAAGAAGAGGAAGAATTGAATGTTGCTGA
AATTGCTGATGAAGTTTATATGGAAGTGATTGTTGGAGAGGAGGATGCTGCAGCCGCAGCTGCA
GCCGCAGTGCATGAACAGCAAGTGGAGGACAACGAAATGAAAACCTTCATGCCGATTGCGTGGG
CAGCTGCTTACGGTAATAATTCTGATGGAATTGAAAACCGGAATGGCACTGCAAGTGCCCTCTT
GCACATAGATGAGTCTGCTGGCCTCGGCAGACTGGCTAAACAAAAACCAAAGAAAAGGAGAAGA
CCTGATTCCAGGCAGTACCAAACAGCAATAATTATTGGCCCAGATGGACATCCTCTCACTGTCT
ACCCTTGCATGATTTGTGGCAAGAAGTTTAAATCGAGAGGTTTCTTAAAAAGACACATGAAAAA
CCATCCTGAACACCTTGCCAAGAAAAAGTACCGCTGTACTGACTGTGATTACACTACCAACAAG
AAGATAAGTTTACACAATCACCTGGAGAGCCACAAGCTAACCAGCAAGGCAGAGAAAGCCATAG
AATGCGATGAGTGTGGAAAGCATTTCTCTCATGCTGGGGCTTTGTTTACTCATAAAATGGTGCA
TAAGGAAAAAGGAGCCAACAAGATGCACAAGTGTAAGTTCTGTGAATATGAAACAGCTGAACAA
GGCCTATTGAATCGCCACCTTTTGGCAGTCCACAGCAAGAATTTTCCTCATATTTGTGTAGAGT
GTGGCAAAGGTTTCCGTCATCCATCAGAGCTCAAAAAGCACATGCGAATCCATACTGGAGAAAA
GCCCTATGAATGCCAGTACTGCGAATACAGGTCCGCAGATTCTTCTAACTTGAAAACACATGTA
AAAACTAAGCATAGTAAAGAGATGCCATTCAAGTGTGACATTTGTCTTCTGACTTTCTCAGATA
CCAAAGAGGTGCAACAACATGCTCTTATCCATCAAGAGAGCAAAACTCACCAGTGTTTGCATTG
TGACCACAAGAGTTCAAACTCAAGTGATTTGAAGCGACACATAATTTCAGTTCATACTAAGGAC
TATCCTCATAAGTGTGACATGTGCGATAAAGGCTTTCACAGGCCTTCAGAACTCAAGAAACATG
TGGCTGCCCACAAGGGTAAAAAAATGCACCAGTGTAGACATTGTGACTTTAAGATTGCAGATCC
GTTTGTACTAAGTCGCCATATTCTCTCGGTTCATACAAAGGACCTTCCATTTAGGTGTAAGAGA
TGTAGAAAGGGATTTCGGCAACAAAGTGAGCTTAAAAAGCATATGAAGACCCACAGTGGCCGGA
AGGTATATCAGTGTGAGTACTGTGAATATAGCACTACAGATGCGTCAGGCTTTAAGCGGCACGT
TATCTCCATTCATACGAAAGACTATCCTCACCGCTGTGAGTACTGCAAGAAAGGATTCCGAAGA
CCCTCGGAAAAGAACCAGCACATAATGCGACATCATAAAGAAGTTGGCCTGCCCTAACCGTACT
CTTCACAGCTGTTTGTAGAGAAACTGGCCTTGAAACAGAAAATTCATTTAAAAGCCAATCAGTC
TTGTTCACTTACAATACTGTATATTGATTTATGCTGTGTACAAATAGGATTATTGCTTCTAGTT
GACTTTGTTTTTACGTTTTGTTCAATAGTGTGTTCTGAATTCTATTCAGTTTGTTTAATACATG
GGAAAAAGCAGCAACAAGTTAGTTGCTTTTACTAAAGTAATCCCTGATTCTATACTGAAGTTTT
CTATCTTAGAAGTTTTATATTTATTTTAAAATATTTACCTTGCTTACCTTGATGGTACTCTTGT
AAGACCAGTTAACTCATGGTAACTCTGCAGTGGTAACTGAAAGGATTCATGTGGACTTTTTGTC
TCACAAATTTCTCACAATTAAATCGTCAGAGACATCTAATGGAATGGGAGATTTTTGTATGGTG
AGGTCTCATGATAGTAACATGGAAGTCATTTATTTGTCTTGTTTAGTATTGTAGACTGTATGAC
AATGAAAGTTTTCATATGAACTTTTGTGTCCCCAGCATCGCTGCGTAAAAGAGCAGTGGCTGGG
TTTGTGTTTACTTTTCTTTTTGATTTTTTTTTTCCTTTTTAGTGGAGAAAATATACTTTTTTTT
TCCTTTAGACTCTTTACATCTTTTGTCAGTGTAGTAAACTTTTAGAAAACCTTGTTGGAAATTT
TTGCTTGATCTTGTTGTATTTTGATTATTTTATCTGTGCTGCTTTGTCTTGGAATGGTTGTGTG
CTCCAAATGAAATTTAACTGAAGACTGCATTTTGGAATCTCCTAGGGGTAACTTGTGGCTCATA
GGATCTTTTGCAACTTTATATATGTAAATGTACCCTGAATTATATATATCTATCTATATATACA
CATATATATGTAACATGTATCTGTGTGTATTGCTTATTTTACATACTTATACACACAACCCCCA
GTAGTAGTTCTTTAAAATCTATAATGAAAAGTATTAAATTTACAGAAACGTGAAAGATCCAGGG
ATGCATGAGAGAGCATTTTGTAAGTCTTGCTCTTCAGAGAGACTACTCAGGTGAAGAATTAGAA
GGAAAATAAGGACACTAGTATTTTTAAAGAGTAAAGGTATTTTCTTTTAAATATCTTTGGTAAT
TGAAAAATAATTGAAAAATAGAGGTTAAGATGTTTATAGATACAATGTTTTCATACAGTTTCAA
CTCCATGCCTTTATATTTTTCTGAAAAGCTAATGGGTATCCAGACATGAATCCCCCAGTTCTCT
CTGATAAGCCGGAGAGAGAGCTCTTGTCTGACCAAGCGAGGGAGACAGAAAGGGAGTGATGGCT
CCATGGACCAGAGAACGGGTGCTAATAAGGACTTAGACTTGGCTAATTGAGCCTGCTCTGTTAG
TTCTTAGTTAACTTGAAAAACTTAACACTCGCTTGTCTTGGATTACATGATAGAGGTGTAGTCC
AAGTGTGTGAACAGTCTGAGGCCTCACTCGGATCCTCACTAAGTCTTTCACAGTTTTGCTTTTG
AGAGCTGGCAATTCGTAACATACAGGTCTGATCGCTGATGAAATTTGTAAAAATAAGTTGGACA
TTAAGAGTTTTGTTAAGATGTCTTTTTGGAAAACAGTTTCTAGAGTCCCTGGAATTGGCTGTTG
GCACACGGGTCTGGCACATCACGGGAAACTTAGAAGTTTCTTCCCACTCGATAGCTGCCTTGCT
GCCTCATTATGGTGCTCCATCCCTTTCGTGCCGTTAGTTTTTACCTTCCACCCTTCTCTTTGTC
ATCAAGATTTGTATTCAAAAGTTATATTTTTGGGGTTAGATGTCTTGAGTATTTGGTGTTTGGC
AAACCTCTGAAGTGCTAGATTGATTTAGTCTAGTTCTAAATCAAATTCTTAAGGCTGGTATGAA
CTCCATTCTCAATGCCAGTCAATGCCAAGGCATGGATTCCCTAGACTTTCCATCTGATAAGGGA
ATCATTTTGCCTTTGTAGCCTCCGCAATGTGCTTTAAAAAATACATCATAACTATGATTTGTTT
TATTGCCCTGTTATTCTTGAAAGCTGTCCTTTTTTTGTGAGAACTTTTAAAATCTACTTTATTA
TTTTCCCCAGAAGTAACGTAAAACACCTAACATTGAAATTTATGAAATTTAAAAATCATCTACA
ATCAGTACAGAACAAATGATTGGACTATTTAACATATATTTTTTTAAATAAACTGAAAAATAAG
GAACACAACACTTTACATACTTTATATTTCTCTTTACATAATCTGGAACCACACGCAGTTCTTT
TCTTTTTAAAGCACAATATTGAAGCCTTTAAAAGGTATTTAAGGGTTTGGTCAAGTGAATAGAA
AATGTGTCTGTATAAAAAGAAAATGAAGTAGTCACTGTTATGTACTGACATTAGTTACAACCTA
GTTTTAATTCTTAAAACAATTTTGATTAGCAAAGCTAAAAAAGGATGTTTCAGTTAAATGTTTT
AAAGAGGTACAGATTTTTACAAGGACATAATATAAGTTATTGTTCTGTAGAAATATCCTATTAA
ATATTGTATGTCCCTCCCTCTGTATACTTTGTAAAAAAAGTAAAATACATAAAAAGGAAATCAT
ATAGGGGATGTGTGACATTATTGTAATTGTGTACTTGAGAATAACGTGCAAAAATAAAAATCAG
AATATTTTCCTGTTAACGAATGTTCAGTCTATTTGATACCAGTACTAAGTTAAAGCTTTTTCTT
AAGAAAGAAAATGTACAGTTTTTGTAAACCTAATAAACATCAAAAGCAGTGGATTATTTTCATC
CCCTATTTCTTAATTCCTTTTATGCAGCAGTGGAATGCAAAGTGCTTGGTTGCTTTGAATTTTG
TGACTTGGATGCAAATACTGATATTTCAGTCCTGTGAATTTGCAAGTAACATTGAGAAGTTAAG
AGGTGATTGGTGAGTCCTTTGATGAGCATGTCCTTGAAATTCATTTTTTCCTTTATCTCTGTAA
ATGGTTCGTTTTATTAGCATCTGATTCCTGTTATAAATTGCCCATCCATAAAGTGGGTTTTGAA
AGCACTTAAGATTTGTTTTATTATCAATTCATAACAAATTTAGTCTGAGGTCCTACCTTAAGTT
CCCCATTTGTGCCCAGGTTAGATGCCTCTAGTAGACTCAAATCTTGGAGGATGGTCACTGTGGT
AGTGAAAGTCAGGAATCCTGAGAGATGTGCAGCACTTCGATTTTAACAATGAGATTCTGTAATC
CAGAAACTAGTGTTGGTCTAAGAGAGCTGAGATGACAAGTAGCCAAAACTTGAGGTACATGTCT
ATGAGAATGTGGTGGACGTCAGTCAAGTCAGTCAGTCACGAGTCTGAGAAAACCTGATCTCACT
CATTCTGCTAAAATGTGCTGCCCTATTGTCGCTGGGGATCTCTGTATTAATTTCCTGCAAAATC
TTACGTTTGTGTAAGGAAACGCAAGATCAGTCAGCATCTTAAAGAGAATCCATGACAGAATAAT
GCCTGTCAGCAAGGTAGTCTGCCCTCTTAGTCCAGTCCTCAGGGAAGTGGGACAAGGCATGAGC
CCCGGCAGCCTTTAATTCTGCTGCCTGCTCAACTTCAGTGATAGTGATCTTAGAGCACTTGAGG
AGCCTAAAGATTACTTAGGTGATGGTTCGTGTAGTAGTCAAGAAGCTCACCAAAAGCAGCTAGT
GATGGCACAGTGAGAGTAAGTTAGAATCCAGAGACTTTTTGGCTTTACCGTTTTTGTAAAAGTC
TTGAGTCCTATCAGTCACTAAGTACATCCTTCAGTGCACATCTGAACAGCTTGTACCTCCTACT
CTTACGTAGCCCCCAATGTTGCATTCCTCAAACACAGGAAGACTTGATAAGTAAAGAGAAGGAC
TGAAAATTGTGTGTTCTCGTGTGTGTTTAATTGGCCCAGAGTTACTAAGGTAATTCATATTAAA
AAGGACATTTTGCTGCATTTTACAACTTTTTAGGAGGTCAAAGTTAAGTTTGCCCTATGAATTT
TGTTTTTATCTTTTGTTTCATGTATATATTGTTTGCCTTTTTCATAAAAATAATTCTTGGATTT
GTTATATATTGTTCCTGTTATTTTTGACATCTTTGCTATTGTAAATAAATTCCTATTTTGTTTT
AAGTTA

hide sequence

RefSeq Acc Id:

XM_008773265 ⟹ XP_008771487

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	62,798,483 - 62,846,733 (-)	NCBI
mRatBN7.2	X	58,804,690 - 58,852,916 (-)	NCBI
Rnor_6.0	X	63,158,368 - 63,204,694 (-)	NCBI

Sequence:

show sequence

GGCCCACAAACATGGTGGGGGGTGGCCCGGGCCTCCCGCCTCTCGACGGGGTCGGCGGACCACG
GCCTCGTGCGGACTTTACGCCGAGGCGGCGGTGGCAGCGGCGTGTGTGTGGCAGCGGTGGCGGG
CGGGAGCGCGGAGGTGGAAAGAAGGGGGGCGCTGTCACGGAAACTCAGGCCGCCCGAGACCCCG
CCGCAGCGAGGCCACGGGGCTCCCCGGTTGCGGGGCGTGAACGGTGCCAACCCGGGGCGTCAGA
GGGACCCACCGGGCGGAGGAGGGGGCCCATCTATCCTTCCGCATTTTCCTGGGTCTCTCTCCCC
GGCGGTGACGTGACGTGCTGACGGCGGGCCCGTGCCGGGGAGCTGGGCCGCTTTTTGTCAGCTC
CGAGCTCGGCCCCTCCTCCCTCCCTCCGCCCGCCCCACCAGCCGGAGCCCGGCCCAGTGCTCCA
GAGAAAGGCCGGCCTGCAGCACCCGCCACCGTCGCCGACCGCCGCACGACTGTCCGGTGCGTAT
AACTGTGCCCAGCTAACCTTGTAAGATGAATTGGGGAGCATTCCCTCTTTTTTGAAACAGGTCT
GTTGCATAGAGGTATCTGATCACTGAAAGGTGTTCTGGCTGATGAGAATTTAAAGGCCATGGAT
GAAGATGGACTTGAATTACAACCACAAGCACCAAACTCATTTTTTGATGCAACAGGAGCTGGTG
CTACACACATGGATGGAAATCAAATTGTTGTGGAAGTACAAGAAACGGTTTATGTGTCAGATGT
TGTGGATTCAGACATAACCGTTCATAACTACGTTCCCGATGACCCAGACTCAGTTGTAATCCAA
GATGTTATTGAGGATGTTGTTATAGAAGATGTCCAATGTACAGATATCATGGACGAAGCAGATG
TGTCCGAAACAGTCATCATCCCTGAACAAGTCCTGGATTCAGATGTAACCGAAGAAGTTTCTTT
AACGCATTGCACAGTTCCAGATGATGTTTTAGCTTCCGATATTACTTCAGCCTCAATATCTATG
CCTGAACATGTCTTGACAAGTGAATCTATACATGTGTCTGACGTTAGTCACGTTGAACATGTGG
TTCATGATAGTGTAGTAGAAGCAGAAATCGTCACAGATCCTCTGACCGCTGATGTTGTTTCGGA
AGAAGTGCTGGTAGCAGACTGTGCCTCTGAAGCAGTCATAGATGCCAACGGGGTCCCTGTGAAC
CAGCAGGATGAAGACAAAGCCAACTGTGAGGACTACCTTATGATCTCTTTGGATGATGCTGGTA
AAATAGAACATGATGGTTCATCTGGACTGACTATGGACAACGAAACAGAAATTGATCCTTGTAA
AGTGGATGGCACTTGCCCTGAAGTCATCAAGGTGTACATTTTTAAAGCTGATCCTGGAGAAGAT
GACTTAGGTGGAACCGTAGACATTGTGGAAAGCGAGCCTGAGAACGAGCATGGGGTTGAACTGC
TTGATCCAAACAACAGTATGCGTGTTCCCAGAGAAAAGATGGTTTATATGGCTGTTAATGACAC
TCAGCAAGAAGAGGAAGAATTGAATGTTGCTGAAATTGCTGATGAAGTTTATATGGAAGTGATT
GTTGGAGAGGAGGATGCTGCAGCCGCAGCTGCAGCCGCAGTGCATGAACAGCAAGTGGAGGACA
ACGAAATGAAAACCTTCATGCCGATTGCGTGGGCAGCTGCTTACGGTAATAATTCTGATGGAAT
TGAAAACCGGAATGGCACTGCAAGTGCCCTCTTGCACATAGATGAGTCTGCTGGCCTCGGCAGA
CTGGCTAAACAAAAACCAAAGAAAAGGAGAAGACCTGATTCCAGGCAGTACCAAACAGCAATAA
TTATTGGCCCAGATGGACATCCTCTCACTGTCTACCCTTGCATGATTTGTGGCAAGAAGTTTAA
ATCGAGAGGTTTCTTAAAAAGACACATGAAAAACCATCCTGAACACCTTGCCAAGAAAAAGTAC
CGCTGTACTGACTGTGATTACACTACCAACAAGAAGATAAGTTTACACAATCACCTGGAGAGCC
ACAAGCTAACCAGCAAGGCAGAGAAAGCCATAGAATGCGATGAGTGTGGAAAGCATTTCTCTCA
TGCTGGGGCTTTGTTTACTCATAAAATGGTGCATAAGGAAAAAGGAGCCAACAAGATGCACAAG
TGTAAGTTCTGTGAATATGAAACAGCTGAACAAGGCCTATTGAATCGCCACCTTTTGGCAGTCC
ACAGCAAGAATTTTCCTCATATTTGTGTAGAGTGTGGCAAAGGTTTCCGTCATCCATCAGAGCT
CAAAAAGCACATGCGAATCCATACTGGAGAAAAGCCCTATGAATGCCAGTACTGCGAATACAGG
TCCGCAGATTCTTCTAACTTGAAAACACATGTAAAAACTAAGCATAGTAAAGAGATGCCATTCA
AGTGTGACATTTGTCTTCTGACTTTCTCAGATACCAAAGAGGTGCAACAACATGCTCTTATCCA
TCAAGAGAGCAAAACTCACCAGTGTTTGCATTGTGACCACAAGAGTTCAAACTCAAGTGATTTG
AAGCGACACATAATTTCAGTTCATACTAAGGACTATCCTCATAAGTGTGACATGTGCGATAAAG
GCTTTCACAGGCCTTCAGAACTCAAGAAACATGTGGCTGCCCACAAGGGTAAAAAAATGCACCA
GTGTAGACATTGTGACTTTAAGATTGCAGATCCGTTTGTACTAAGTCGCCATATTCTCTCGGTT
CATACAAAGGACCTTCCATTTAGGTGTAAGAGATGTAGAAAGGGATTTCGGCAACAAAGTGAGC
TTAAAAAGCATATGAAGACCCACAGTGGCCGGAAGGTATATCAGTGTGAGTACTGTGAATATAG
CACTACAGATGCGTCAGGCTTTAAGCGGCACGTTATCTCCATTCATACGAAAGACTATCCTCAC
CGCTGTGAGTACTGCAAGAAAGGATTCCGAAGACCCTCGGAAAAGAACCAGCACATAATGCGAC
ATCATAAAGAAGTTGGCCTGCCCTAACCGTACTCTTCACAGCTGTTTGTAGAGAAACTGGCCTT
GAAACAGAAAATTCATTTAAAAGCCAATCAGTCTTGTTCACTTACAATACTGTATATTGATTTA
TGCTGTGTACAAATAGGATTATTGCTTCTAGTTGACTTTGTTTTTACGTTTTGTTCAATAGTGT
GTTCTGAATTCTATTCAGTTTGTTTAATACATGGGAAAAAGCAGCAACAAGTTAGTTGCTTTTA
CTAAAGTAATCCCTGATTCTATACTGAAGTTTTCTATCTTAGAAGTTTTATATTTATTTTAAAA
TATTTACCTTGCTTACCTTGATGGTACTCTTGTAAGACCAGTTAACTCATGGTAACTCTGCAGT
GGTAACTGAAAGGATTCATGTGGACTTTTTGTCTCACAAATTTCTCACAATTAAATCGTCAGAG
ACATCTAATGGAATGGGAGATTTTTGTATGGTGAGGTCTCATGATAGTAACATGGAAGTCATTT
ATTTGTCTTGTTTAGTATTGTAGACTGTATGACAATGAAAGTTTTCATATGAACTTTTGTGTCC
CCAGCATCGCTGCGTAAAAGAGCAGTGGCTGGGTTTGTGTTTACTTTTCTTTTTGATTTTTTTT
TTCCTTTTTAGTGGAGAAAATATACTTTTTTTTTCCTTTAGACTCTTTACATCTTTTGTCAGTG
TAGTAAACTTTTAGAAAACCTTGTTGGAAATTTTTGCTTGATCTTGTTGTATTTTGATTATTTT
ATCTGTGCTGCTTTGTCTTGGAATGGTTGTGTGCTCCAAATGAAATTTAACTGAAGACTGCATT
TTGGAATCTCCTAGGGGTAACTTGTGGCTCATAGGATCTTTTGCAACTTTATATATGTAAATGT
ACCCTGAATTATATATATCTATCTATATATACACATATATATGTAACATGTATCTGTGTGTATT
GCTTATTTTACATACTTATACACACAACCCCCAGTAGTAGTTCTTTAAAATCTATAATGAAAAG
TATTAAATTTACAGAAACGTGAAAGATCCAGGGATGCATGAGAGAGCATTTTGTAAGTCTTGCT
CTTCAGAGAGACTACTCAGGTGAAGAATTAGAAGGAAAATAAGGACACTAGTATTTTTAAAGAG
TAAAGGTATTTTCTTTTAAATATCTTTGGTAATTGAAAAATAATTGAAAAATAGAGGTTAAGAT
GTTTATAGATACAATGTTTTCATACAGTTTCAACTCCATGCCTTTATATTTTTCTGAAAAGCTA
ATGGGTATCCAGACATGAATCCCCCAGTTCTCTCTGATAAGCCGGAGAGAGAGCTCTTGTCTGA
CCAAGCGAGGGAGACAGAAAGGGAGTGATGGCTCCATGGACCAGAGAACGGGTGCTAATAAGGA
CTTAGACTTGGCTAATTGAGCCTGCTCTGTTAGTTCTTAGTTAACTTGAAAAACTTAACACTCG
CTTGTCTTGGATTACATGATAGAGGTGTAGTCCAAGTGTGTGAACAGTCTGAGGCCTCACTCGG
ATCCTCACTAAGTCTTTCACAGTTTTGCTTTTGAGAGCTGGCAATTCGTAACATACAGGTCTGA
TCGCTGATGAAATTTGTAAAAATAAGTTGGACATTAAGAGTTTTGTTAAGATGTCTTTTTGGAA
AACAGTTTCTAGAGTCCCTGGAATTGGCTGTTGGCACACGGGTCTGGCACATCACGGGAAACTT
AGAAGTTTCTTCCCACTCGATAGCTGCCTTGCTGCCTCATTATGGTGCTCCATCCCTTTCGTGC
CGTTAGTTTTTACCTTCCACCCTTCTCTTTGTCATCAAGATTTGTATTCAAAAGTTATATTTTT
GGGGTTAGATGTCTTGAGTATTTGGTGTTTGGCAAACCTCTGAAGTGCTAGATTGATTTAGTCT
AGTTCTAAATCAAATTCTTAAGGCTGGTATGAACTCCATTCTCAATGCCAGTCAATGCCAAGGC
ATGGATTCCCTAGACTTTCCATCTGATAAGGGAATCATTTTGCCTTTGTAGCCTCCGCAATGTG
CTTTAAAAAATACATCATAACTATGATTTGTTTTATTGCCCTGTTATTCTTGAAAGCTGTCCTT
TTTTTGTGAGAACTTTTAAAATCTACTTTATTATTTTCCCCAGAAGTAACGTAAAACACCTAAC
ATTGAAATTTATGAAATTTAAAAATCATCTACAATCAGTACAGAACAAATGATTGGACTATTTA
ACATATATTTTTTTAAATAAACTGAAAAATAAGGAACACAACACTTTACATACTTTATATTTCT
CTTTACATAATCTGGAACCACACGCAGTTCTTTTCTTTTTAAAGCACAATATTGAAGCCTTTAA
AAGGTATTTAAGGGTTTGGTCAAGTGAATAGAAAATGTGTCTGTATAAAAAGAAAATGAAGTAG
TCACTGTTATGTACTGACATTAGTTACAACCTAGTTTTAATTCTTAAAACAATTTTGATTAGCA
AAGCTAAAAAAGGATGTTTCAGTTAAATGTTTTAAAGAGGTACAGATTTTTACAAGGACATAAT
ATAAGTTATTGTTCTGTAGAAATATCCTATTAAATATTGTATGTCCCTCCCTCTGTATACTTTG
TAAAAAAAGTAAAATACATAAAAAGGAAATCATATAGGGGATGTGTGACATTATTGTAATTGTG
TACTTGAGAATAACGTGCAAAAATAAAAATCAGAATATTTTCCTGTTAACGAATGTTCAGTCTA
TTTGATACCAGTACTAAGTTAAAGCTTTTTCTTAAGAAAGAAAATGTACAGTTTTTGTAAACCT
AATAAACATCAAAAGCAGTGGATTATTTTCATCCCCTATTTCTTAATTCCTTTTATGCAGCAGT
GGAATGCAAAGTGCTTGGTTGCTTTGAATTTTGTGACTTGGATGCAAATACTGATATTTCAGTC
CTGTGAATTTGCAAGTAACATTGAGAAGTTAAGAGGTGATTGGTGAGTCCTTTGATGAGCATGT
CCTTGAAATTCATTTTTTCCTTTATCTCTGTAAATGGTTCGTTTTATTAGCATCTGATTCCTGT
TATAAATTGCCCATCCATAAAGTGGGTTTTGAAAGCACTTAAGATTTGTTTTATTATCAATTCA
TAACAAATTTAGTCTGAGGTCCTACCTTAAGTTCCCCATTTGTGCCCAGGTTAGATGCCTCTAG
TAGACTCAAATCTTGGAGGATGGTCACTGTGGTAGTGAAAGTCAGGAATCCTGAGAGATGTGCA
GCACTTCGATTTTAACAATGAGATTCTGTAATCCAGAAACTAGTGTTGGTCTAAGAGAGCTGAG
ATGACAAGTAGCCAAAACTTGAGGTACATGTCTATGAGAATGTGGTGGACGTCAGTCAAGTCAG
TCAGTCACGAGTCTGAGAAAACCTGATCTCACTCATTCTGCTAAAATGTGCTGCCCTATTGTCG
CTGGGGATCTCTGTATTAATTTCCTGCAAAATCTTACGTTTGTGTAAGGAAACGCAAGATCAGT
CAGCATCTTAAAGAGAATCCATGACAGAATAATGCCTGTCAGCAAGGTAGTCTGCCCTCTTAGT
CCAGTCCTCAGGGAAGTGGGACAAGGCATGAGCCCCGGCAGCCTTTAATTCTGCTGCCTGCTCA
ACTTCAGTGATAGTGATCTTAGAGCACTTGAGGAGCCTAAAGATTACTTAGGTGATGGTTCGTG
TAGTAGTCAAGAAGCTCACCAAAAGCAGCTAGTGATGGCACAGTGAGAGTAAGTTAGAATCCAG
AGACTTTTTGGCTTTACCGTTTTTGTAAAAGTCTTGAGTCCTATCAGTCACTAAGTACATCCTT
CAGTGCACATCTGAACAGCTTGTACCTCCTACTCTTACGTAGCCCCCAATGTTGCATTCCTCAA
ACACAGGAAGACTTGATAAGTAAAGAGAAGGACTGAAAATTGTGTGTTCTCGTGTGTGTTTAAT
TGGCCCAGAGTTACTAAGGTAATTCATATTAAAAAGGACATTTTGCTGCATTTTACAACTTTTT
AGGAGGTCAAAGTTAAGTTTGCCCTATGAATTTTGTTTTTATCTTTTGTTTCATGTATATATTG
TTTGCCTTTTTCATAAAAATAATTCTTGGATTTGTTATATATTGTTCCTGTTATTTTTGACATC
TTTGCTATTGTAAATAAATTCCTATTTTGTTTTAAGTTA

hide sequence

RefSeq Acc Id:

XM_039099945 ⟹ XP_038955873

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	62,798,483 - 62,847,068 (-)	NCBI
mRatBN7.2	X	58,804,690 - 58,853,155 (-)	NCBI

RefSeq Acc Id:

XM_039099946 ⟹ XP_038955874

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	62,798,483 - 62,846,734 (-)	NCBI
mRatBN7.2	X	58,804,690 - 58,852,918 (-)	NCBI

RefSeq Acc Id:

XM_039099947 ⟹ XP_038955875

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	62,798,483 - 62,846,734 (-)	NCBI
mRatBN7.2	X	58,804,690 - 58,852,918 (-)	NCBI

RefSeq Acc Id:

XM_063280177 ⟹ XP_063136247

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	62,798,483 - 62,846,735 (-)	NCBI

RefSeq Acc Id:

XM_063280178 ⟹ XP_063136248

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	62,798,483 - 62,846,735 (-)	NCBI

RefSeq Acc Id:

XM_063280179 ⟹ XP_063136249

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	62,798,483 - 62,847,068 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_001102487	(Get FASTA)	NCBI Sequence Viewer
	XP_006257092	(Get FASTA)	NCBI Sequence Viewer
	XP_006257094	(Get FASTA)	NCBI Sequence Viewer
	XP_008771487	(Get FASTA)	NCBI Sequence Viewer
	XP_038955873	(Get FASTA)	NCBI Sequence Viewer
	XP_038955874	(Get FASTA)	NCBI Sequence Viewer
	XP_038955875	(Get FASTA)	NCBI Sequence Viewer
	XP_063136247	(Get FASTA)	NCBI Sequence Viewer
	XP_063136248	(Get FASTA)	NCBI Sequence Viewer
	XP_063136249	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAG38797	(Get FASTA)	NCBI Sequence Viewer
	EDL96008	(Get FASTA)	NCBI Sequence Viewer
	EDL96009	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000068137.3
	ENSRNOP00000068277
	ENSRNOP00000068277.2
	ENSRNOP00000068521
	ENSRNOP00000068521.3
	ENSRNOP00000112832
	ENSRNOP00000112832.1

RefSeq Acc Id:

NP_001102487 ⟸ NM_001109017

- UniProtKB:

A0A096MJI1 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MDEDGLELQPQAPNSFFDATGAGATHMDGNQIVVEVQETVYVSDVVDSDITVHNYVPDDPDSVV
IQDVIEDVVIEDVQCTDIMDEADVSETVIIPEQVLDSDVTEEVSLTHCTVPDDVLASDITSASI
SMPEHVLTSESIHVSDVSHVEHVVHDSVVEAEIVTDPLTADVVSEEVLVADCASEAVIDANGVP
VNQQDEDKANCEDYLMISLDDAGKIEHDGSSGLTMDNETEIDPCKVDGTCPEVIKVYIFKADPG
EDDLGGTVDIVESEPENEHGVELLDPNNSMRVPREKMVYMAVNDTQQEEEELNVAEIADEVYME
VIVGEEDAAAAAAAAVHEQQVEDNEMKTFMPIAWAAAYGNNSDGIENRNGTASALLHIDESAGL
GRLAKQKPKKRRRPDSRQYQTESSTISTEQMIGLFNIYFFK

hide sequence

RefSeq Acc Id:	XP_006257092 ⟸ XM_006257030
- Peptide Label:	isoform X1
- UniProtKB:	A0A096MJI1 (UniProtKB/TrEMBL)
- Sequence:	show sequence MDEDGLELQPQAPNSFFDATGAGATHMDGNQIVVEVQETVYVSDVVDSDITVHNYVPDDPDSVV IQDVIEDVVIEDVQCTDIMDEADVSETVIIPEQVLDSDVTEEVSLTHCTVPDDVLASDITSASI SMPEHVLTSESIHVSDVSHVEHVVHDSVVEAEIVTDPLTADVVSEEVLVADCASEAVIDANGVP VNQQDEDKANCEDYLMISLDDAGKIEHDGSSGLTMDNETEIDPCKVDGTCPEVIKVYIFKADPG EDDLGGTVDIVESEPENEHGVELLDPNNSMRVPREKMVYMAVNDTQQEEEELNVAEIADEVYME VIVGEEDAAAAAAAAVHEQQVEDNEMKTFMPIAWAAAYGNNSDGIENRNGTASALLHIDESAGL GRLAKQKPKKRRRPDSRQYQTAIIIGPDGHPLTVYPCMICGKKFKSRGFLKRHMKNHPEHLAKK KYRCTDCDYTTNKKISLHNHLESHKLTSKAEKAIECDECGKHFSHAGALFTHKMVHKEKGANKM HKCKFCEYETAEQGLLNRHLLAVHSKNFPHICVECGKGFRHPSELKKHMRIHTGEKPYECQYCE YRSADSSNLKTHVKTKHSKEMPFKCDICLLTFSDTKEVQQHALIHQESKTHQCLHCDHKSSNSS DLKRHIISVHTKDYPHKCDMCDKGFHRPSELKKHVAAHKGKKMHQCRHCDFKIADPFVLSRHIL SVHTKDLPFRCKRCRKGFRQQSELKKHMKTHSGRKVYQCEYCEYSTTDASGFKRHVISIHTKDY PHRCEYCKKGFRRPSEKNQHIMRHHKEVGLP hide sequence

RefSeq Acc Id:	XP_006257094 ⟸ XM_006257032
- Peptide Label:	isoform X1
- UniProtKB:	A0A096MJI1 (UniProtKB/TrEMBL)
- Sequence:	show sequence MDEDGLELQPQAPNSFFDATGAGATHMDGNQIVVEVQETVYVSDVVDSDITVHNYVPDDPDSVV IQDVIEDVVIEDVQCTDIMDEADVSETVIIPEQVLDSDVTEEVSLTHCTVPDDVLASDITSASI SMPEHVLTSESIHVSDVSHVEHVVHDSVVEAEIVTDPLTADVVSEEVLVADCASEAVIDANGVP VNQQDEDKANCEDYLMISLDDAGKIEHDGSSGLTMDNETEIDPCKVDGTCPEVIKVYIFKADPG EDDLGGTVDIVESEPENEHGVELLDPNNSMRVPREKMVYMAVNDTQQEEEELNVAEIADEVYME VIVGEEDAAAAAAAAVHEQQVEDNEMKTFMPIAWAAAYGNNSDGIENRNGTASALLHIDESAGL GRLAKQKPKKRRRPDSRQYQTAIIIGPDGHPLTVYPCMICGKKFKSRGFLKRHMKNHPEHLAKK KYRCTDCDYTTNKKISLHNHLESHKLTSKAEKAIECDECGKHFSHAGALFTHKMVHKEKGANKM HKCKFCEYETAEQGLLNRHLLAVHSKNFPHICVECGKGFRHPSELKKHMRIHTGEKPYECQYCE YRSADSSNLKTHVKTKHSKEMPFKCDICLLTFSDTKEVQQHALIHQESKTHQCLHCDHKSSNSS DLKRHIISVHTKDYPHKCDMCDKGFHRPSELKKHVAAHKGKKMHQCRHCDFKIADPFVLSRHIL SVHTKDLPFRCKRCRKGFRQQSELKKHMKTHSGRKVYQCEYCEYSTTDASGFKRHVISIHTKDY PHRCEYCKKGFRRPSEKNQHIMRHHKEVGLP hide sequence

RefSeq Acc Id:	XP_008771487 ⟸ XM_008773265
- Peptide Label:	isoform X1
- UniProtKB:	A0A096MJI1 (UniProtKB/TrEMBL)
- Sequence:	show sequence MDEDGLELQPQAPNSFFDATGAGATHMDGNQIVVEVQETVYVSDVVDSDITVHNYVPDDPDSVV IQDVIEDVVIEDVQCTDIMDEADVSETVIIPEQVLDSDVTEEVSLTHCTVPDDVLASDITSASI SMPEHVLTSESIHVSDVSHVEHVVHDSVVEAEIVTDPLTADVVSEEVLVADCASEAVIDANGVP VNQQDEDKANCEDYLMISLDDAGKIEHDGSSGLTMDNETEIDPCKVDGTCPEVIKVYIFKADPG EDDLGGTVDIVESEPENEHGVELLDPNNSMRVPREKMVYMAVNDTQQEEEELNVAEIADEVYME VIVGEEDAAAAAAAAVHEQQVEDNEMKTFMPIAWAAAYGNNSDGIENRNGTASALLHIDESAGL GRLAKQKPKKRRRPDSRQYQTAIIIGPDGHPLTVYPCMICGKKFKSRGFLKRHMKNHPEHLAKK KYRCTDCDYTTNKKISLHNHLESHKLTSKAEKAIECDECGKHFSHAGALFTHKMVHKEKGANKM HKCKFCEYETAEQGLLNRHLLAVHSKNFPHICVECGKGFRHPSELKKHMRIHTGEKPYECQYCE YRSADSSNLKTHVKTKHSKEMPFKCDICLLTFSDTKEVQQHALIHQESKTHQCLHCDHKSSNSS DLKRHIISVHTKDYPHKCDMCDKGFHRPSELKKHVAAHKGKKMHQCRHCDFKIADPFVLSRHIL SVHTKDLPFRCKRCRKGFRQQSELKKHMKTHSGRKVYQCEYCEYSTTDASGFKRHVISIHTKDY PHRCEYCKKGFRRPSEKNQHIMRHHKEVGLP hide sequence

Ensembl Acc Id:

ENSRNOP00000060490 ⟸ ENSRNOT00000065194

Ensembl Acc Id:

ENSRNOP00000068150 ⟸ ENSRNOT00000076974

Ensembl Acc Id:

ENSRNOP00000068277 ⟸ ENSRNOT00000076175

Ensembl Acc Id:

ENSRNOP00000068137 ⟸ ENSRNOT00000076613

Ensembl Acc Id:

ENSRNOP00000068521 ⟸ ENSRNOT00000076765

RefSeq Acc Id:	XP_038955873 ⟸ XM_039099945
- Peptide Label:	isoform X1
- UniProtKB:	A0A096MJI1 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038955875 ⟸ XM_039099947
- Peptide Label:	isoform X3
- UniProtKB:	A0A096MJV6 (UniProtKB/TrEMBL), A0A096MJI1 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038955874 ⟸ XM_039099946
- Peptide Label:	isoform X2
- UniProtKB:	A0A096MJI1 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063136249 ⟸ XM_063280179
- Peptide Label:	isoform X3
- UniProtKB:	A0A096MJV6 (UniProtKB/TrEMBL), A0A096MJI1 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063136247 ⟸ XM_063280177
- Peptide Label:	isoform X3
- UniProtKB:	A0A096MJV6 (UniProtKB/TrEMBL), A0A096MJI1 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063136248 ⟸ XM_063280178
- Peptide Label:	isoform X3
- UniProtKB:	A0A096MJV6 (UniProtKB/TrEMBL), A0A096MJI1 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000112832 ⟸ ENSRNOT00000149886

Protein Domains

C2H2-type

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-A0A096MJV6-F1-model_v2	AlphaFold	A0A096MJV6	1-799	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13701842

Promoter ID:

EPDNEW_R12363

Type:

single initiation site

Name:

Zfx_1

Description:

zinc finger protein X-linked

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	X	63,204,520 - 63,204,580	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1562664	AgrOrtholog
BioCyc Gene	G2FUF-2248	BioCyc
Ensembl Genes	ENSRNOG00000005624	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000076175	ENTREZGENE
	ENSRNOT00000076175.4	UniProtKB/TrEMBL
	ENSRNOT00000076613.4	UniProtKB/TrEMBL
	ENSRNOT00000076765	ENTREZGENE
	ENSRNOT00000076765.3	UniProtKB/TrEMBL
	ENSRNOT00000149886	ENTREZGENE
	ENSRNOT00000149886.1	UniProtKB/TrEMBL
Gene3D-CATH	Classic Zinc Finger	UniProtKB/TrEMBL
InterPro	Krueppel_C2H2-ZF	UniProtKB/TrEMBL
	Transcrp_activ_Zfx/Zfy-dom	UniProtKB/TrEMBL
	Znf_C2H2/integrase_DNA-bd	UniProtKB/TrEMBL
	Znf_C2H2_sf	UniProtKB/TrEMBL
NCBI Gene	367832	ENTREZGENE
PANTHER	CHROMATIN-LINKED ADAPTOR FOR MSL PROTEINS, ISOFORM B	UniProtKB/TrEMBL
	PR_SET DOMAIN 13	UniProtKB/TrEMBL
	ZINC FINGER PROTEIN	UniProtKB/TrEMBL
	ZINC FINGER PROTEIN	UniProtKB/TrEMBL
	ZINC FINGER PROTEIN	UniProtKB/TrEMBL
Pfam	zf-C2H2	UniProtKB/TrEMBL
	Zfx_Zfy_act	UniProtKB/TrEMBL
PhenoGen	Zfx	PhenoGen
PROSITE	ZINC_FINGER_C2H2_1	UniProtKB/TrEMBL
	ZINC_FINGER_C2H2_2	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000005624	RatGTEx
SMART	ZnF_C2H2	UniProtKB/TrEMBL
Superfamily-SCOP	SSF57667	UniProtKB/TrEMBL
UniProt	A0A096MJI1	ENTREZGENE, UniProtKB/TrEMBL
	A0A096MJV6	ENTREZGENE, UniProtKB/TrEMBL
	A0A096MKH8_RAT	UniProtKB/TrEMBL
	A0ABK0M9W7_RAT	UniProtKB/TrEMBL
	Q99NJ3_RAT	UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2008-04-30	Zfx	zinc finger protein X-linked	Zfx_predicted	zinc finger protein X-linked (predicted)	'predicted' is removed	2292626	APPROVED
2006-03-30	Zfx_predicted	zinc finger protein X-linked (predicted)	RGD1562664_predicted	similar to sex-determining protein Zfx - mouse (predicted)	Symbol and Name updated	1299863	APPROVED
2006-03-07	RGD1562664_predicted	similar to sex-determining protein Zfx - mouse (predicted)	LOC367832	similar to sex-determining protein Zfx - mouse	Symbol and Name status set to approved	1299863	APPROVED
2006-02-09	LOC367832	similar to sex-determining protein Zfx - mouse			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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