Or10ad1 (olfactory receptor family 10 subfamily AD member 1) - Rat Genome Database

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Gene: Or10ad1 (olfactory receptor family 10 subfamily AD member 1) Rattus norvegicus
Analyze
No known orthologs.
Symbol: Or10ad1
Name: olfactory receptor family 10 subfamily AD member 1
RGD ID: 1562157
Description: Predicted to enable olfactory receptor activity. Predicted to be involved in detection of chemical stimulus involved in sensory perception of smell. Predicted to be located in membrane. Predicted to be active in plasma membrane. Orthologous to human OR10AD1 (olfactory receptor family 10 subfamily AD member 1).
Type: pseudo (Ensembl: protein-coding)
RefSeq Status: INFERRED
Previously known as: LOC500926; olfactory receptor 10AD1-like; olfactory receptor, family 10, subfamily AD, member 1; RGD1562157; similar to olfactory receptor Olfr287
RGD Orthologs
Alliance Orthologs
More Info homologs ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr87131,197,516 - 131,198,340 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl7131,218,095 - 131,220,802 (-)EnsemblGRCr8
mRatBN7.27129,318,457 - 129,319,281 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl7129,318,457 - 129,319,407 (-)EnsemblmRatBN7.2
Rnor_6.07139,781,775 - 139,782,794 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_5.07138,917,299 - 138,936,588 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.47136,905,308 - 136,907,853 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera7125,810,153 - 125,811,172 (-)NCBICelera
Cytogenetic Map7q36NCBI
JBrowse:




Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
membrane  (IEA)
plasma membrane  (IBA,IEA)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. GOA pipeline RGD automated data pipeline

Genomics

Variants

.
Variants in Or10ad1
1 total Variants

QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
631529Tls2T-lymphoma susceptibility QTL 200.001thymus integrity trait (VT:0010555)percentage of study population developing T-cell lymphomas during a period of time (CMO:0001911)782111382132099989Rat
1354582Stl11Serum triglyceride level QTL 113.42blood triglyceride amount (VT:0002644)serum triglyceride level (CMO:0000360)7121393075137014596Rat
731176Glom5Glomerulus QTL 52.50.0035kidney glomerulus morphology trait (VT:0005325)count of superficial glomeruli not directly contacting the kidney surface (CMO:0001002)798549867137014596Rat
1300112Bp183Blood pressure QTL 1833.51arterial blood pressure trait (VT:2000000)blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)7119280025135560836Rat
1331731Bp216Blood pressure QTL 2162.851arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)7104186212135371468Rat
631687Hcas1Hepatocarcinoma susceptibility QTL 13.90.001liver integrity trait (VT:0010547)liver tumorous lesion volume to total liver volume ratio (CMO:0001082)793302009131686183Rat
1331748Bp215Blood pressure QTL 2154.043arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)7110725024135371468Rat
61428Scl3Serum cholesterol level QTL 33.2blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)7100548246137014596Rat
61397Bw17Body weight QTL 176.3body mass (VT:0001259)body weight (CMO:0000012)795485047137014596Rat
1331746Kidm9Kidney mass QTL 93.934kidney mass (VT:0002707)right kidney wet weight (CMO:0000082)782111245134948181Rat
1358914Bp266Blood pressure QTL 266arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)7115313999136544683Rat
2299163Iddm34Insulin dependent diabetes mellitus QTL 342.71blood glucose amount (VT:0000188)age at onset/diagnosis of type 1 diabetes mellitus (CMO:0001140)7116269196132020414Rat
1549899Stresp8Stress response QTL 84.370.0008stress-related behavior trait (VT:0010451)defensive burying duration (CMO:0001961)792362341137014596Rat
1358891Bp265Blood pressure QTL 2652.21arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)771827901136544683Rat


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSRNOT00000080497   ⟹   ENSRNOP00000072625
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl7131,218,095 - 131,220,802 (-)Ensembl
mRatBN7.2 Ensembl7129,318,457 - 129,319,407 (-)Ensembl
RefSeq Acc Id: XM_039080562   ⟹   XP_038936490
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.27129,316,500 - 129,319,494 (-)NCBI
Protein Sequences
Ensembl Protein ENSRNOP00000072625.3
RefSeq Acc Id: XP_038936490   ⟸   XM_039080562
Ensembl Acc Id: ENSRNOP00000072625   ⟸   ENSRNOT00000080497

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-A0A0G2K3G2-F1-model_v2 AlphaFold A0A0G2K3G2 1-322 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1562157 AgrOrtholog
BioCyc Gene G2FUF-32153 BioCyc
Ensembl Genes ENSRNOG00000064488 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000080497.3 UniProtKB/TrEMBL
Gene3D-CATH Rhodopsin 7-helix transmembrane proteins UniProtKB/TrEMBL
InterPro GPCR_Rhodpsn UniProtKB/TrEMBL
  GPCR_Rhodpsn_7TM UniProtKB/TrEMBL
  Olfact_rcpt UniProtKB/TrEMBL
NCBI Gene 500926 ENTREZGENE
PANTHER OLFACTORY RECEPTOR UniProtKB/TrEMBL
Pfam 7tm_4 UniProtKB/TrEMBL
PhenoGen Or10ad1 PhenoGen
PRINTS GPCRRHODOPSN UniProtKB/TrEMBL
  OLFACTORYR UniProtKB/TrEMBL
PROSITE G_PROTEIN_RECEP_F1_1 UniProtKB/TrEMBL
  G_PROTEIN_RECEP_F1_2 UniProtKB/TrEMBL
RatGTEx ENSRNOG00000064488 RatGTEx
Superfamily-SCOP Family A G protein-coupled receptor-like UniProtKB/TrEMBL
UniProt A0A0G2K3G2_RAT UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2022-08-16 Or10ad1  olfactory receptor family 10 subfamily AD member 1  Or10ad1  olfactory receptor, family 10, subfamily AD, member 1  Name Changed 1299863 APPROVED
2022-06-02 Or10ad1  olfactory receptor, family 10, subfamily AD, member 1  Or10ad1  olfactory receptor, family 10, subfamily AD, member 1  Data merged from RGD:149736440 737654 PROVISIONAL
2021-08-09 Or10ad1  olfactory receptor, family 10, subfamily AD, member 1      Symbol and Name status set to provisional 45752 PROVISIONAL
2012-02-02 Or10ad1  olfactory receptor, family 10, subfamily AD, member 1  RGD1562157  similar to olfactory receptor Olfr287  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-04-30 RGD1562157  similar to olfactory receptor Olfr287   RGD1562157_predicted  similar to olfactory receptor Olfr287 (predicted)  'predicted' is removed 2292626 APPROVED
2006-03-07 RGD1562157_predicted  similar to olfactory receptor Olfr287 (predicted)  LOC500926  similar to olfactory receptor Olfr287  Symbol and Name status set to approved 1299863 APPROVED
2006-02-09 LOC500926  similar to olfactory receptor Olfr287      Symbol and Name status set to provisional 70820 PROVISIONAL