Irag2 (inositol 1,4,5-triphosphate receptor associated 2) - Rat Genome Database

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Advanced Search (OLGA)
Gene: Irag2 (inositol 1,4,5-triphosphate receptor associated 2) Rattus norvegicus
Analyze
Symbol: Irag2
Name: inositol 1,4,5-triphosphate receptor associated 2
RGD ID: 1562062
Description: Predicted to enable microtubule binding activity. Predicted to be involved in nucleus organization. Predicted to be located in endoplasmic reticulum and nuclear envelope. Predicted to be part of meiotic nuclear membrane microtubule tethering complex. Predicted to be active in endoplasmic reticulum membrane. Orthologous to human IRAG2 (inositol 1,4,5-triphosphate receptor associated 2); INTERACTS WITH 17beta-estradiol; 17beta-estradiol 3-benzoate; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: LOC500361; Lrmp; lymphoid-restricted membrane protein; RGD1562062; similar to lymphoid-restricted membrane protein
RGD Orthologs
Human
Mouse
Bonobo
Dog
Squirrel
Pig
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr84179,819,526 - 179,874,408 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl4179,820,188 - 179,874,406 (+)EnsemblGRCr8
mRatBN7.24178,088,902 - 178,143,569 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl4178,088,507 - 178,143,557 (+)EnsemblmRatBN7.2
Dahl_SR_JrHsd4182,045,045 - 182,099,231 (+)NCBIDahl_SR_JrHsd
Lyon_Normotensive4179,682,059 - 179,736,231 (+)NCBILyon_Normotensive
Lyon_Hypertensive4180,177,546 - 180,231,721 (+)NCBILyon_Hypertensive
F344_StmMcwi4179,504,215 - 179,556,915 (+)NCBIF344_StmMcwi
Rnor_6.04179,402,929 - 179,440,792 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl4179,398,621 - 179,440,792 (+)Ensemblrn6Rnor6.0
Rnor_5.04243,566,523 - 243,622,275 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.44182,769,091 - 182,823,096 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera4166,609,190 - 166,662,977 (+)NCBICelera
Cytogenetic Map4q44NCBI
JBrowse:




Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
1,2-dichloroethane  (ISO)
1,2-dimethylhydrazine  (ISO)
17alpha-ethynylestradiol  (ISO)
17beta-estradiol  (EXP,ISO)
17beta-estradiol 3-benzoate  (EXP)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2-butoxyethanol  (ISO)
2-methoxyethanol  (EXP)
3,4-methylenedioxymethamphetamine  (ISO)
4,4'-diaminodiphenylmethane  (ISO)
4,4'-sulfonyldiphenol  (ISO)
4-hydroxyphenyl retinamide  (ISO)
aflatoxin B1  (ISO)
all-trans-retinoic acid  (ISO)
alpha-Zearalanol  (EXP)
arsenite(3-)  (ISO)
benzo[a]pyrene  (ISO)
benzo[b]fluoranthene  (ISO)
bis(2-chloroethyl) sulfide  (ISO)
bisphenol A  (EXP,ISO)
bisphenol AF  (ISO)
Bisphenol B  (ISO)
bisphenol F  (ISO)
buta-1,3-diene  (ISO)
Butylbenzyl phthalate  (ISO)
cadmium atom  (ISO)
cadmium dichloride  (ISO)
carbon nanotube  (ISO)
carmustine  (ISO)
CGP 52608  (ISO)
chloroprene  (ISO)
chlorpyrifos  (ISO)
chrysene  (ISO)
cisplatin  (ISO)
curcumin  (ISO)
cyclophosphamide  (ISO)
dexamethasone  (ISO)
Dibutyl phosphate  (ISO)
diethylstilbestrol  (ISO)
doxorubicin  (ISO)
epoxiconazole  (ISO)
ethyl methanesulfonate  (ISO)
formaldehyde  (ISO)
lead diacetate  (ISO)
lipopolysaccharide  (ISO)
methoxychlor  (EXP)
methyl methanesulfonate  (ISO)
nickel atom  (ISO)
nitrates  (ISO)
okadaic acid  (ISO)
ozone  (ISO)
paracetamol  (ISO)
paraquat  (EXP)
pirinixic acid  (ISO)
quercetin  (ISO)
resveratrol  (ISO)
S-(1,2-dichlorovinyl)-L-cysteine  (ISO)
silicon dioxide  (ISO)
tamoxifen  (ISO)
testosterone  (EXP)
tetraphene  (ISO)
thioacetamide  (EXP)
triphenyl phosphate  (ISO)
triptonide  (ISO)
valproic acid  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8021504   PMID:8798562   PMID:19946888   PMID:20071408  


Genomics

Comparative Map Data
Irag2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr84179,819,526 - 179,874,408 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl4179,820,188 - 179,874,406 (+)EnsemblGRCr8
mRatBN7.24178,088,902 - 178,143,569 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl4178,088,507 - 178,143,557 (+)EnsemblmRatBN7.2
Dahl_SR_JrHsd4182,045,045 - 182,099,231 (+)NCBIDahl_SR_JrHsd
Lyon_Normotensive4179,682,059 - 179,736,231 (+)NCBILyon_Normotensive
Lyon_Hypertensive4180,177,546 - 180,231,721 (+)NCBILyon_Hypertensive
F344_StmMcwi4179,504,215 - 179,556,915 (+)NCBIF344_StmMcwi
Rnor_6.04179,402,929 - 179,440,792 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl4179,398,621 - 179,440,792 (+)Ensemblrn6Rnor6.0
Rnor_5.04243,566,523 - 243,622,275 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.44182,769,091 - 182,823,096 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera4166,609,190 - 166,662,977 (+)NCBICelera
Cytogenetic Map4q44NCBI
IRAG2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381224,997,575 - 25,108,335 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1225,004,342 - 25,108,489 (+)Ensemblhg38GRCh38
GRCh371225,150,509 - 25,261,269 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361225,096,508 - 25,152,536 (+)NCBIBuild 36Build 36hg18NCBI36
Build 341225,096,507 - 25,152,535NCBI
Celera1230,352,134 - 30,408,250 (+)NCBICelera
Cytogenetic Map12p12.1NCBI
HuRef1224,975,144 - 25,031,962 (+)NCBIHuRef
CHM1_11225,170,280 - 25,226,399 (+)NCBICHM1_1
T2T-CHM13v2.01224,867,671 - 24,979,246 (+)NCBIT2T-CHM13v2.0
Irag2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm396145,061,357 - 145,120,655 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl6145,061,379 - 145,120,660 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm386145,111,715 - 145,174,929 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl6145,115,653 - 145,174,934 (+)Ensemblmm10GRCm38
MGSCv376145,070,259 - 145,123,448 (+)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv366145,078,971 - 145,132,087 (+)NCBIMGSCv36mm8
Celera6148,196,040 - 148,249,134 (+)NCBICelera
Cytogenetic Map6G3NCBI
cM Map677.34NCBI
IRAG2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21071,707,922 - 71,819,191 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11271,704,296 - 71,815,587 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01261,204,844 - 61,261,839 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11263,820,075 - 63,876,237 (-)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1263,820,075 - 63,923,499 (-)EnsemblpanPan2panpan1.1
IRAG2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12722,369,197 - 22,422,421 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2722,369,356 - 22,495,824 (-)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha2723,946,410 - 23,999,408 (+)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.02722,568,367 - 22,621,889 (-)NCBIROS_Cfam_1.0ROS_Cfam_1.0
UMICH_Zoey_3.12722,383,349 - 22,436,848 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02722,402,326 - 22,455,863 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02724,119,118 - 24,172,437 (+)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Irag2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494584,274,447 - 84,330,281 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365482,197,325 - 2,252,829 (-)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049365482,197,298 - 2,240,495 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
IRAG2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl548,648,986 - 48,766,390 (-)EnsemblsusScr11Sscrofa11.1
Sscrofa11.1548,649,067 - 48,706,727 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Irag2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462475213,932,144 - 14,052,357 (-)NCBIHetGla 1.0HetGla 1.0hetGla2
Irag2
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v162,895,110 - 2,935,124 (+)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Irag2
353 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:72
Count of miRNA genes:33
Interacting mature miRNAs:35
Transcripts:ENSRNOT00000049474, ENSRNOT00000067506
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
6478754Anxrr43Anxiety related response QTL 430.14035locomotor behavior trait (VT:0001392)distance moved per unit of time into, out of or within a discrete space in an experimental apparatus (CMO:0001493)4146370897184426481Rat
6478720Alc23Alcohol consumption QTL 230.00509drinking behavior trait (VT:0001422)ethanol drink intake rate to body weight ratio (CMO:0001616)4155834926184426481Rat
6478785Anxrr53Anxiety related response QTL 530.01397locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)4155834926184426481Rat
1581566Eae21Experimental allergic encephalomyelitis QTL 216.2body mass (VT:0001259)maximum body weight loss to initial body weight ratio (CMO:0001400)4137447185182447185Rat
6478757Anxrr44Anxiety related response QTL 440.01087locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)4155834926184426481Rat
6478693Anxrr32Anxiety related response QTL 320.00092locomotor behavior trait (VT:0001392)measurement of voluntary locomotion into, out of or within a discrete space in an experimental apparatus (CMO:0000957)4146370897184426481Rat
1578674Bmd12Bone mineral density QTL 123.8femur mineral mass (VT:0010011)compact volumetric bone mineral density (CMO:0001730)4137430611182430611Rat
6478728Anxrr36Anxiety related response QTL 360.01061locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)4155834926184426481Rat
738016Alc16Alcohol consumption QTL 163.60.00015consumption behavior trait (VT:0002069)ethanol drink intake rate to body weight ratio (CMO:0001616)460916264184426481Rat
1331738Bp209Blood pressure QTL 2092.979arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)4140059299181024663Rat
6478700Anxrr33Anxiety related response QTL 330.00896locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)4146370897184426481Rat
1298524Oia8Oil induced arthritis QTL 8joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)4140059299184426481Rat
6478733Anxrr37Anxiety related response QTL 370.00095locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)4155834926184426481Rat
10053718Scort25Serum corticosterone level QTL 252.150.0097blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)4157292416184426481Rat
738009Sach4Saccharine consumption QTL 44.90.000016consumption behavior trait (VT:0002069)saccharin intake volume to total fluid intake volume ratio (CMO:0001601)460916264184426481Rat
61362Oia2Oil induced arthritis QTL 20.001joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)4140059299184426481Rat
6478737Anxrr38Anxiety related response QTL 380.00159locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)4155834926184426481Rat
2293659Bmd35Bone mineral density QTL 354.50.0001femur strength trait (VT:0010010)femoral neck ultimate force (CMO:0001703)4160623982184426481Rat
10401796Kidm48Kidney mass QTL 48kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)4147299608184426481Rat
6478718Anxrr34Anxiety related response QTL 340.00896locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)4146370897184426481Rat
6478782Anxrr52Anxiety related response QTL 520.02091locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)4155834926184426481Rat
2316958Gluco58Glucose level QTL 5810blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)412212457182430611Rat
1300109Rf13Renal function QTL 133.91renal blood flow trait (VT:2000006)absolute change in renal blood flow rate (CMO:0001168)4176806581181925369Rat
6478748Anxrr42Anxiety related response QTL 420.28008locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)4146370897184426481Rat

Markers in Region
D4Rat140  
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr84179,792,340 - 179,792,492 (+)Marker Load Pipeline
mRatBN7.24178,061,498 - 178,061,650 (+)MAPPERmRatBN7.2
Rnor_6.04179,355,374 - 179,355,525NCBIRnor6.0
Rnor_5.04243,538,984 - 243,539,135UniSTSRnor5.0
RGSC_v3.44182,740,817 - 182,741,162RGDRGSC3.4
RGSC_v3.44182,740,979 - 182,741,130UniSTSRGSC3.4
Celera4166,581,024 - 166,581,175UniSTS
RGSC_v3.14182,986,103 - 182,986,254RGD
RH 3.4 Map41067.2RGD
RH 3.4 Map41067.2UniSTS
RH 2.0 Map41091.5RGD
SHRSP x BN Map498.8099RGD
Cytogenetic Map4q44UniSTS
RH132020  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.24178,143,532 - 178,143,724 (+)MAPPERmRatBN7.2
Rnor_6.04179,441,018 - 179,441,209NCBIRnor6.0
Rnor_5.04243,622,248 - 243,622,439UniSTSRnor5.0
RGSC_v3.44182,823,060 - 182,823,251UniSTSRGSC3.4
Celera4166,662,948 - 166,663,139UniSTS
RH 3.4 Map41066.7UniSTS
Cytogenetic Map4q44UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 67 165 91 90 59 92 59 6 356 192 11 144 81 92 31 17 17

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001427185 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008775868 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017593093 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063286579 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063286580 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063286581 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063286582 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063286583 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063286584 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063286585 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063286586 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063286587 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063286588 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063286589 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063286590 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063286591 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063286592 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063286593 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063286594 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide CH473964 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAXUCZ010000004 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSRNOT00000049474   ⟹   ENSRNOP00000046606
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl4179,820,188 - 179,874,404 (+)Ensembl
mRatBN7.2 Ensembl4178,088,507 - 178,143,557 (+)Ensembl
Rnor_6.0 Ensembl4179,398,621 - 179,440,792 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000067506   ⟹   ENSRNOP00000059916
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl4179,820,188 - 179,874,404 (+)Ensembl
mRatBN7.2 Ensembl4178,088,507 - 178,143,557 (+)Ensembl
Rnor_6.0 Ensembl4179,398,639 - 179,440,792 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000093893   ⟹   ENSRNOP00000081442
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl4179,820,211 - 179,874,403 (+)Ensembl
mRatBN7.2 Ensembl4178,088,732 - 178,143,557 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000150781   ⟹   ENSRNOP00000102134
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl4179,837,674 - 179,874,406 (+)Ensembl
RefSeq Acc Id: NM_001427185   ⟹   NP_001414114
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr84179,820,255 - 179,874,390 (+)NCBI
Dahl_SR_JrHsd4182,045,045 - 182,099,231 (+)NCBI
Lyon_Normotensive4179,682,059 - 179,736,231 (+)NCBI
Lyon_Hypertensive4180,177,546 - 180,231,721 (+)NCBI
F344_StmMcwi4179,504,215 - 179,556,915 (+)NCBI
RefSeq Acc Id: XM_063286579   ⟹   XP_063142649
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr84179,820,172 - 179,874,408 (+)NCBI
RefSeq Acc Id: XM_063286580   ⟹   XP_063142650
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr84179,820,172 - 179,874,408 (+)NCBI
RefSeq Acc Id: XM_063286581   ⟹   XP_063142651
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr84179,821,809 - 179,874,408 (+)NCBI
RefSeq Acc Id: XM_063286582   ⟹   XP_063142652
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr84179,833,501 - 179,874,408 (+)NCBI
RefSeq Acc Id: XM_063286583   ⟹   XP_063142653
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr84179,820,174 - 179,874,408 (+)NCBI
RefSeq Acc Id: XM_063286584   ⟹   XP_063142654
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr84179,820,175 - 179,874,408 (+)NCBI
RefSeq Acc Id: XM_063286585   ⟹   XP_063142655
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr84179,833,508 - 179,874,408 (+)NCBI
RefSeq Acc Id: XM_063286586   ⟹   XP_063142656
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr84179,820,175 - 179,874,408 (+)NCBI
RefSeq Acc Id: XM_063286587   ⟹   XP_063142657
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr84179,819,526 - 179,874,408 (+)NCBI
RefSeq Acc Id: XM_063286588   ⟹   XP_063142658
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr84179,834,612 - 179,874,408 (+)NCBI
RefSeq Acc Id: XM_063286589   ⟹   XP_063142659
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr84179,820,172 - 179,874,408 (+)NCBI
RefSeq Acc Id: XM_063286590   ⟹   XP_063142660
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr84179,820,173 - 179,874,408 (+)NCBI
RefSeq Acc Id: XM_063286591   ⟹   XP_063142661
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr84179,820,174 - 179,874,408 (+)NCBI
RefSeq Acc Id: XM_063286592   ⟹   XP_063142662
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr84179,820,175 - 179,874,408 (+)NCBI
RefSeq Acc Id: XM_063286593   ⟹   XP_063142663
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr84179,820,175 - 179,874,408 (+)NCBI
RefSeq Acc Id: XM_063286594   ⟹   XP_063142664
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr84179,834,608 - 179,874,408 (+)NCBI
Ensembl Acc Id: ENSRNOP00000059916   ⟸   ENSRNOT00000067506
Ensembl Acc Id: ENSRNOP00000046606   ⟸   ENSRNOT00000049474
Ensembl Acc Id: ENSRNOP00000081442   ⟸   ENSRNOT00000093893
RefSeq Acc Id: XP_063142657   ⟸   XM_063286587
- Peptide Label: isoform X4
- UniProtKB: A6IMZ5 (UniProtKB/TrEMBL),   F1LXR9 (UniProtKB/TrEMBL),   F1M1R8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063142649   ⟸   XM_063286579
- Peptide Label: isoform X1
- UniProtKB: F1M1R8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063142659   ⟸   XM_063286589
- Peptide Label: isoform X5
- UniProtKB: F1M1R8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063142650   ⟸   XM_063286580
- Peptide Label: isoform X1
- UniProtKB: F1M1R8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063142660   ⟸   XM_063286590
- Peptide Label: isoform X6
- UniProtKB: F1M1R8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063142661   ⟸   XM_063286591
- Peptide Label: isoform X7
- UniProtKB: F1M1R8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063142653   ⟸   XM_063286583
- Peptide Label: isoform X2
- UniProtKB: F1M1R8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063142656   ⟸   XM_063286586
- Peptide Label: isoform X3
- UniProtKB: F1M1R8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063142662   ⟸   XM_063286592
- Peptide Label: isoform X8
- UniProtKB: A0A8I6G5Y4 (UniProtKB/TrEMBL),   F1M1R8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063142654   ⟸   XM_063286584
- Peptide Label: isoform X3
- UniProtKB: F1M1R8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063142663   ⟸   XM_063286593
- Peptide Label: isoform X8
- UniProtKB: A0A8I6G5Y4 (UniProtKB/TrEMBL),   F1M1R8 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001414114   ⟸   NM_001427185
- UniProtKB: F1M1R8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063142651   ⟸   XM_063286581
- Peptide Label: isoform X1
- UniProtKB: F1M1R8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063142652   ⟸   XM_063286582
- Peptide Label: isoform X1
- UniProtKB: F1M1R8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063142655   ⟸   XM_063286585
- Peptide Label: isoform X3
- UniProtKB: F1M1R8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063142664   ⟸   XM_063286594
- Peptide Label: isoform X8
- UniProtKB: A0A8I6G5Y4 (UniProtKB/TrEMBL),   F1M1R8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063142658   ⟸   XM_063286588
- Peptide Label: isoform X4
- UniProtKB: A6IMZ5 (UniProtKB/TrEMBL),   F1LXR9 (UniProtKB/TrEMBL),   F1M1R8 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSRNOP00000102134   ⟸   ENSRNOT00000150781

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-F1LXR9-F1-model_v2 AlphaFold F1LXR9 1-536 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1562062 AgrOrtholog
BioCyc Gene G2FUF-42460 BioCyc
Ensembl Genes ENSRNOG00000029308 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000049474 ENTREZGENE
  ENSRNOT00000049474.8 UniProtKB/TrEMBL
  ENSRNOT00000067506.5 UniProtKB/TrEMBL
  ENSRNOT00000093893 ENTREZGENE
  ENSRNOT00000093893.2 UniProtKB/TrEMBL
  ENSRNOT00000150781 ENTREZGENE
  ENSRNOT00000150781.1 UniProtKB/TrEMBL
InterPro MRVI1 UniProtKB/TrEMBL
NCBI Gene 500361 ENTREZGENE
PANTHER INOSITOL 1,4,5-TRIPHOSPHATE RECEPTOR ASSOCIATED 2 UniProtKB/TrEMBL
  PTHR15352 UniProtKB/TrEMBL
Pfam MRVI1 UniProtKB/TrEMBL
PhenoGen Irag2 PhenoGen
RatGTEx ENSRNOG00000029308 RatGTEx
UniProt A0A8I6G5Y4 ENTREZGENE, UniProtKB/TrEMBL
  A0ABK0LJU6_RAT UniProtKB/TrEMBL
  A6IMZ5 ENTREZGENE, UniProtKB/TrEMBL
  F1LXR9 ENTREZGENE, UniProtKB/TrEMBL
  F1M1R8 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2020-04-28 Irag2  inositol 1,4,5-triphosphate receptor associated 2  Lrmp  lymphoid-restricted membrane protein  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-02-29 Lrmp  lymphoid-restricted membrane protein  RGD1562062_predicted  similar to lymphoid-restricted membrane protein (predicted)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2006-03-07 RGD1562062_predicted  similar to lymphoid-restricted membrane protein (predicted)  LOC500361  similar to lymphoid-restricted membrane protein  Symbol and Name status set to approved 1299863 APPROVED
2006-02-09 LOC500361  similar to lymphoid-restricted membrane protein      Symbol and Name status set to provisional 70820 PROVISIONAL