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Gene: Ankrd44 (ankyrin repeat domain 44) Rattus norvegicus

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Symbol:

Ankrd44

Name:

ankyrin repeat domain 44

RGD ID:

1561893

Description:

Predicted to be located in membrane. Orthologous to human ANKRD44 (ankyrin repeat domain 44); INTERACTS WITH 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine; 2,3,7,8-Tetrachlorodibenzofuran.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

LOC301415; RGD1561893; serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B; similar to hypothetical protein DKFZp434D2328

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	ANKRD44 (ankyrin repeat domain 44)	HGNC	Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, Panther
Mus musculus (house mouse):	Ankrd44 (ankyrin repeat domain 44)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Ankrd44 (ankyrin repeat domain 44)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	ANKRD44 (ankyrin repeat domain 44)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	ANKRD44 (ankyrin repeat domain 44)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Ankrd44 (ankyrin repeat domain 44)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	ANKRD44 (ankyrin repeat domain 44)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	ANKRD44 (ankyrin repeat domain 44)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Ankrd44 (ankyrin repeat domain 44)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Ankrd44 (ankyrin repeat domain 44)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	ANKRD28 (ankyrin repeat domain 28)	HGNC	OrthoDB
Alliance orthologs ³
Homo sapiens (human):	ANKRD44 (ankyrin repeat domain 44)	Alliance	DIOPT (HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Ankrd44 (ankyrin repeat domain 44)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Ankrd44 (ankyrin repeat domain 44)	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	ankrd44 (ankyrin repeat domain 44)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	trp-4	Alliance	DIOPT (InParanoid\|PhylomeDB)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	9	63,621,193 - 63,921,999 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	9	63,555,869 - 63,921,940 (-)	Ensembl				GRCr8
mRatBN7.2	9	56,126,746 - 56,427,661 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	9	56,126,747 - 56,427,508 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	9	64,650,438 - 64,938,126 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	9	69,766,336 - 70,054,024 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	9	68,051,783 - 68,345,438 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	9	61,229,252 - 61,529,532 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	9	61,231,988 - 61,528,882 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	9	60,910,883 - 61,100,315 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	9	53,425,161 - 53,622,961 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	9	53,619,185 - 53,910,099 (-)	NCBI		Celera
Cytogenetic Map	9	q31	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

NEURODEVELOPMENTAL DISORDER WITH HYPOTONIA, SEIZURES, AND ABSENT LANGUAGE (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(-)-epigallocatechin 3-gallate (ISO)

1,2-dimethylhydrazine (ISO)

17beta-estradiol (EXP)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2,3,7,8-Tetrachlorodibenzofuran (EXP)

2-palmitoylglycerol (ISO)

aflatoxin B1 (ISO)

all-trans-retinoic acid (ISO)

alpha-Zearalanol (EXP)

antirheumatic drug (ISO)

aristolochic acid A (ISO)

arsenite(3-) (ISO)

benzo[a]pyrene (ISO)

benzo[b]fluoranthene (ISO)

bisphenol A (EXP,ISO)

Butylbenzyl phthalate (ISO)

cadmium atom (ISO)

cadmium dichloride (ISO)

carbon nanotube (ISO)

cisplatin (ISO)

copper atom (ISO)

copper(0) (ISO)

Dibutyl phosphate (ISO)

dioxygen (ISO)

dorsomorphin (ISO)

endosulfan (EXP)

entinostat (ISO)

epoxiconazole (ISO)

folic acid (ISO)

formaldehyde (ISO)

Heptachlor epoxide (ISO)

hydralazine (ISO)

hydrogen peroxide (ISO)

lead diacetate (ISO)

lipopolysaccharide (ISO)

methamphetamine (EXP)

methapyrilene (EXP)

methotrexate (ISO)

methyl methanesulfonate (ISO)

methylmercury chloride (ISO)

nickel atom (ISO)

ozone (ISO)

paracetamol (ISO)

phenobarbital (ISO)

pirinixic acid (ISO)

potassium chromate (ISO)

resveratrol (ISO)

rotenone (ISO)

S-(1,2-dichlorovinyl)-L-cysteine (ISO)

SB 431542 (ISO)

SCH 23390 (EXP)

sodium arsenate (ISO)

sodium arsenite (ISO)

succimer (ISO)

sunitinib (ISO)

testosterone (ISO)

theophylline (ISO)

thimerosal (ISO)

titanium dioxide (ISO)

tungsten (ISO)

valproic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Molecular Function

protein binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:8889548

Genomics

Comparative Map Data

Ankrd44
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	9	63,621,193 - 63,921,999 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	9	63,555,869 - 63,921,940 (-)	Ensembl				GRCr8
mRatBN7.2	9	56,126,746 - 56,427,661 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	9	56,126,747 - 56,427,508 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	9	64,650,438 - 64,938,126 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	9	69,766,336 - 70,054,024 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	9	68,051,783 - 68,345,438 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	9	61,229,252 - 61,529,532 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	9	61,231,988 - 61,528,882 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	9	60,910,883 - 61,100,315 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	9	53,425,161 - 53,622,961 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	9	53,619,185 - 53,910,099 (-)	NCBI		Celera
Cytogenetic Map	9	q31	NCBI

ANKRD44
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	2	196,967,014 - 197,310,780 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	2	196,967,017 - 197,311,173 (-)	Ensembl			hg38	GRCh38
GRCh37	2	197,851,386 - 198,175,504 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	2	197,567,495 - 197,771,007 (-)	NCBI	Build 36	Build 36	hg18	NCBI36
Celera	2	191,615,131 - 191,818,640 (-)	NCBI		Celera
Cytogenetic Map	2	q33.1	NCBI
HuRef	2	189,704,373 - 189,904,880 (-)	NCBI		HuRef
CHM1_1	2	197,857,237 - 198,181,262 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	2	197,446,277 - 197,794,518 (-)	NCBI		T2T-CHM13v2.0

Ankrd44
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	1	54,684,499 - 54,968,142 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	1	54,684,499 - 54,965,546 (-)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	1	54,645,340 - 54,928,983 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	1	54,645,340 - 54,926,387 (-)	Ensembl			mm10	GRCm38
MGSCv37	1	54,702,184 - 54,983,231 (-)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	1	54,589,885 - 54,870,932 (-)	NCBI		MGSCv36	mm8
Celera	1	55,170,354 - 55,451,587 (-)	NCBI		Celera
Cytogenetic Map	1	C1.2	NCBI
cM Map	1	27.7	NCBI

Ankrd44
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955403	3,299,083 - 3,462,661 (+)	Ensembl
ChiLan1.0	NW_004955403	3,228,360 - 3,476,988 (+)	NCBI	ChiLan1.0	ChiLan1.0

ANKRD44
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	13	99,580,890 - 99,924,995 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	2B	99,595,881 - 99,939,986 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	2B	84,230,570 - 84,554,326 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	2B	202,128,829 - 202,328,703 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	2B	202,128,829 - 202,331,534 (-)	Ensembl			panPan2	panpan1.1

ANKRD44
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	37	6,500,741 - 6,756,505 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	37	6,541,554 - 6,753,028 (-)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	37	7,448,149 - 7,811,318 (-)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	37	6,391,070 - 6,755,454 (-)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	37	6,390,418 - 6,755,458 (-)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	37	6,390,678 - 6,754,530 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	37	6,357,832 - 6,721,346 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	37	6,379,412 - 6,744,626 (-)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Ankrd44
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405303	154,665,244 - 154,957,989 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936506	1,879,955 - 2,167,675 (+)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936506	1,880,001 - 2,167,663 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

ANKRD44
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	15	100,868,472 - 101,211,242 (-)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	15	100,868,469 - 101,211,172 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	15	112,049,216 - 112,388,834 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

ANKRD44
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	10	82,476,650 - 82,817,635 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	10	82,501,795 - 82,817,629 (-)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666040	116,621,650 - 116,956,462 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Ankrd44
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624889	2,883,624 - 3,124,709 (+)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624889	2,883,639 - 3,126,011 (+)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Ankrd44
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	4	129,111,610 - 129,389,482 (-)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Ankrd44
1166 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	737
Count of miRNA genes:	280
Interacting mature miRNAs:	362
Transcripts:	ENSRNOT00000015432
Prediction methods:	Microtar, Miranda
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
2303170	Bp332	Blood pressure QTL 332	3.73	0.027	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	9	6714888	84474983	Rat
631656	Bp108	Blood pressure QTL 108	5.97	0.0001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	9	56047863	101047863	Rat
7411571	Bw138	Body weight QTL 138	14.3	0.001	body mass (VT:0001259)	body weight gain (CMO:0000420)	9	40029925	85029925	Rat
1582203	Gluco19	Glucose level QTL 19	3.3	0.001	blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	9	63376862	108376862	Rat
1300180	Bw14	Body weight QTL 14	3.776		body mass (VT:0001259)	body weight (CMO:0000012)	9	31250432	68875676	Rat
8662828	Vetf6	Vascular elastic tissue fragility QTL 6	3.9		artery integrity trait (VT:0010639)	patent ductus arteriosus score (CMO:0002566)	9	44458256	99506504	Rat
61450	Ciaa3	CIA Autoantibody QTL 3	6.5		blood autoantibody amount (VT:0003725)	calculated serum anti-type 2 collagen antibody titer (CMO:0001279)	9	29567664	74567664	Rat
1598834	Memor11	Memory QTL 11	2.5		exploratory behavior trait (VT:0010471)	average horizontal distance between subject and target during voluntary locomotion in an experimental apparatus (CMO:0002674)	9	44458256	85262605	Rat
70186	Niddm26	Non-insulin dependent diabetes mellitus QTL 26	3.87		blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	9	29567664	83835942	Rat
70218	Cm28	Cardiac mass QTL 28	8.3	0.0001	heart mass (VT:0007028)	heart wet weight (CMO:0000069)	9	41720295	86720295	Rat
7207805	Bmd88	Bone mineral density QTL 88	4		femur mineral mass (VT:0010011)	total volumetric bone mineral density (CMO:0001728)	9	31250432	65651574	Rat
2290450	Scl57	Serum cholesterol level QTL 57	4.15		blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	9	44458256	121768150	Rat
1581517	Bp284	Blood pressure QTL 284			arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	9	39220186	84220186	Rat
731164	Uae25	Urinary albumin excretion QTL 25	3.5	0.0001	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	9	48718864	108376862	Rat
7411656	Foco26	Food consumption QTL 26	9.8	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	9	40029925	85029925	Rat
1598849	Memor17	Memory QTL 17	2.2		exploratory behavior trait (VT:0010471)	difference between duration of physical contact or close proximity of test subject and social stimulus during sample phase and test phase (CMO:0002678)	9	57460497	78547958	Rat
4889943	Bss90	Bone structure and strength QTL 90	4.1		tibia area (VT:1000281)	tibia-fibula cortical bone endosteal cross-sectional area (CMO:0001722)	9	54506504	99506504	Rat
1641894	Alcrsp12	Alcohol response QTL 12			response to alcohol trait (VT:0010489)	brain neurotensin receptor 1 density (CMO:0002068)	9	34960590	79960590	Rat

Markers in Region

RH130484

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	9	56,126,884 - 56,127,095 (+)	MAPPER	mRatBN7.2
Rnor_6.0	9	61,229,391 - 61,229,601	NCBI	Rnor6.0
Rnor_5.0	9	60,911,022 - 60,911,232	UniSTS	Rnor5.0
RGSC_v3.4	9	53,422,363 - 53,422,573	UniSTS	RGSC3.4
Celera	9	53,619,324 - 53,619,534	UniSTS
RH 3.4 Map	9	474.38	UniSTS
Cytogenetic Map	9	q31	UniSTS

ha3140

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	1	202,058,266 - 202,059,223 (+)	MAPPER	mRatBN7.2
Rnor_6.0	1	220,019,730 - 220,020,686	NCBI	Rnor6.0
Rnor_5.0	1	226,884,846 - 226,885,802	UniSTS	Rnor5.0
RGSC_v3.4	1	207,374,390 - 207,375,346	UniSTS	RGSC3.4
Celera	1	199,598,776 - 199,599,732	UniSTS
Cytogenetic Map	9	q31	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	165	91	90	59	92	59	6	356	192	11	144	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001191807	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017596350	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017596351	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017596352	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017596353	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017596354	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017596355	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039083293	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039083295	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	BI274641	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473965	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ158391	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000009	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000015432 ⟹ ENSRNOP00000015432

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	9	63,621,193 - 63,921,940 (-)	Ensembl
mRatBN7.2 Ensembl	9	56,126,748 - 56,316,594 (-)	Ensembl
Rnor_6.0 Ensembl	9	61,232,190 - 61,528,882 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000078800 ⟹ ENSRNOP00000070078

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	9	63,621,193 - 63,921,940 (-)	Ensembl
mRatBN7.2 Ensembl	9	56,126,748 - 56,257,403 (-)	Ensembl
Rnor_6.0 Ensembl	9	61,231,988 - 61,418,679 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000101355 ⟹ ENSRNOP00000091674

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	9	63,621,193 - 63,921,940 (-)	Ensembl
mRatBN7.2 Ensembl	9	56,126,747 - 56,427,508 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000145325 ⟹ ENSRNOP00000106935

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	9	63,599,005 - 63,921,940 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000156337 ⟹ ENSRNOP00000109772

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	9	63,609,531 - 63,921,940 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000157275 ⟹ ENSRNOP00000110743

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	9	63,555,869 - 63,921,940 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000169163 ⟹ ENSRNOP00000105631

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	9	63,609,426 - 63,921,940 (-)	Ensembl

RefSeq Acc Id:

NM_001191807 ⟹ NP_001178736

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	63,621,193 - 63,921,940 (-)	NCBI
mRatBN7.2	9	56,126,746 - 56,427,508 (-)	NCBI
Rnor_6.0	9	61,229,252 - 61,529,480 (-)	NCBI
Rnor_5.0	9	60,910,883 - 61,100,315 (-)	NCBI
Celera	9	53,619,185 - 53,910,099 (-)	NCBI

Sequence:

show sequence

TCCCGCGAGCCGGGGCTGGGCTCTGGGAGGCAGGCGGCAGCGGCCGAGCGGTGGCAGGGCTGTC
ACCTTCGCGAGCCCAGCTCCTGGCGCTTCCCCGGGCCGTCCCTTCCGTTTCTCCGGGCTCCCGG
CGTTGACATCTACGAAGCGGAGAGCTGTATGTGCGCGCGCGCGGGAACGGAAGAATGGCAGTGC
TCAAACTCTGCGATCAGCCACCTCTGGTCCAGGCAATCTTCAGTGGCGACCCAGAGGAGATTCG
CCTGCTCATCCATAAGACTGAAGATGTGAACGCACTGGATTCTGAGAAACGAACCCCGCTTCAT
GTGGCTGCATTCCTGGGAGATGCAGAGATCATCGAGCTCCTGATTTTGTCAGGAGCTCGCGTAA
ATGCCAAGGACAACATGTGGCTGACCCCACTGCACCGGGCTGTTGCTTCCAGAAGTGAAGAGGC
AGTGCAAGTATTGATTAAACACTCGGCTGACGTCAATGCAAGGGACAAGAATTGGCAGAGCCCC
GTCCATGTGGCAGCAGCCAATAAGGCTGTCAAGTGTGCAGAAGTGATCATTCCACTCCTGAGCA
GTGTCAATGTCTCTGACAGAGGGGGACGCACAGCCTTGCACCATGCGGCTCTGAACGGACACAT
GGAGATGGTCAATTTACTCTTGGCCAAAGGGGCAAACATCAATGCATTTGACAAGAAGGACCGG
CGTGCTCTCCACTGGGCAGCATACATGGGCCACCTGGATGTTGTGGCACTGCTCATTAACCATG
GCGCAGAAGTGACCTGCAAGGATAAGAAGGGCTATACCCCACTGCACGCTGCAGCCTCCAATGG
GCAGATCAATGTTGTCAAACATCTCCTGAACCTGGGGGTGGAGATTGATGAAATCAATGTCTAT
GGAAACACAGCACTTCACATTGCCTGCTACAATGGCCAGGATGCTGTCGTTAATGAGCTGATCG
ACTACGGCGCTAACGTGAACCAGCCTAACAACAGTGGCTTCACCCCTCTGCACTTTGCAGCGGC
GTCTACTCACGGTGCTCTGTGTCTGGAACTGTTAGTCAACAATGGGGCCGATGTGAACATTCAG
AGTAAGGATGGCAAAAGTCCTCTGCACATGACGGCTGTCCATGGGCGGTTCACACGGTCACAAA
CCCTCATTCAGAATGGAGGTGAAATCGACTGTGTGGATAAGGATGGCAACACACCTCTCCATGT
GGCTGCAAGATATGGTCACGAGCTCCTGATTAACACCCTAATAACTAGCGGAGCTGACACAGCC
AAGTGTGGAATCCATAGCATGTTCCCCCTCCATTTAGCTGCCCTAAATGCTCACTCTGACTGCT
GCAGGAAGTTGTTATCCTCTGGCTTTGAAATAGACACCCCAGATACGTTTGGAAGAACGTGCCT
CCACGCCGCTGCTGCAGGAGGCAATGTAGAATGTATAAAGCTCTTGCAGAGCAGCGGAGCGGAT
TTTCACAAAAAGGACAAATGTGGGAGGACCCCTTTGCACTATGCAGCTGCAAATTGTCATTTCC
ACTGTATTAAAGCATTAGTGACCACCGGAGCCAATATCAATGAAACAGACAACTGGGGACGGAC
AGCTTTGCACTACGCTGCTGCATCAGACATGGATAGAAATAAGATGATCTTAGGCAACGCCCAT
GACAATTCTGAAGAACTTGAAAGGGCCAGGGAAGTGAAGGGGAAGGACGCCGCGCTATGTCTAG
AGTTTCTGCTTCAGAACGATGCAAACCCATCCATCCGGGACAAGGAAGGCTACAATAGCATCCA
TTATGCTGCGGCCTATGGCCACAGGCAGTGTCTAGAACTGCTTTTGGAAAGAACCAACACTGGT
TTTGAAGAATCAGACGGCGGTGCTCTCAAGAGTCCACTCCACTTAGCGGCCTACAATGGGCACC
ACCAAGCCTTGGAGGTCCTTCTCCAGTCCCTAGTGGACCTGGACATCAGGGATGAGAAAGGCCG
GACGGCCCTGTACCTAGCTGCTTTCAAGGGACACACAGAATGTGTGGAAGCACTTGTTAACCAG
GGCGCATCCATCTTCGTGAAAGACAATGTCACCAAAAGAACTCCACTTCATGCCTCGGTTATTA
ATGGTCACACGCTGTGTTTGAGGCTACTACTTGAAATAGCGGACAACCCGGAAGTGGTTGATGT
GAAGGATGCCAAGGGACAAACCCCACTGATGCTTGCAGTAGCATATGGACACATTGATGCCGTT
TCGTTGTTACTTGAAAAGGAAGCAAACGTAGATGCTGTTGACACAGTGGGCTGCACAGCTTTAC
ATAGAGGGATCATGACAGGACATGAGGAATGTGTGCAAATGCTGCTGGAACAAGAAGCATCCAT
CCTCTGTAAAGACTCCAGAGGGAGGACACCCCTGCACTATGCCGCTGCCCGGGGCCACGCCACG
TGGCTGAATGAGTTGGTCCAGATTGCGCTTTCTGAAGAGGACTGTTGCCTCAAAGACAACCAGG
GATACACGCCGCTGCACTGGGCCTGTTACAATGGTAATGAAAATTGCATAGAGGTACTTTTGGA
GCAAAAATGTTTTCGAAAATTTATTGGTAATCCCTTCACTCCACTGCACTGTGCAATAATAAAC
GGTCATGAGAGCTGTGCATCACTGCTCCTGGGGGCCATAGATTCCAGCATTGTCAGCTGTAGGG
ATGACAAAGGCAGGACAACCCTCCATGCGGCAGCCTTTGGGGATCATGCAGAATGCTTGCAGCT
GCTTCTGAGGCATGACGCTCAAGTGAATGCCGTAGATAATTCAGGGAAAACAGCGCTGATGATG
GCCGCTGAGAACGGGCAGGCAGGCGCTGTGGATATTTTGGTGAACAGTGCCCAGGCTGACCTGA
CTGTGAAAGATAAGGACCTGAACACGCCCTTGCACCTGGCTATCAGTAAAGGCCATGAGAAATG
TGCCTTGTTAATACTTGACAAGATACAAGACGAGAGCCTTATCAACGCGAAAAACAGTGCATTG
CAGACACCCCTCCATATTGCTGCACGCAATGGCTTGAAGGTGGTAGTTGAGGAGCTGCTGGCTA
AAGGAGCCTGTGTACTTGCCGTAGATGAAAATGCTTCTAGGTCGAATGGACCCCGTTCTCCACC
TGGAACAGCTGTACGAAAAGAAGAATGAGACTTTAAGAATTATGCACATACACATGCACACATG
TGTGTATATTTATGTATGTACTTCATCAACCAGCTATCCATGAGGACCAAAATGCTTCTGCTTA
AACTGGGATGTTCTAAGTGTTTTTTTCTTTCTACATGCAAGTGAGAACTGCAGTAACTTTTCTA
TGGGGTTAAAATGTAATCGTTTTACATACCAGTCTTTATTGTATTTTATATTTCTAATGACACA
GATTTCTAGTTGATAGCTTGACATTTGTAACCGATGATGTGTTGACCACAGGTTTTTGTTTTCA
GACTAGAGAATATGTCTGTATACTTTGATGTAAATGTGTTTCTATTTATTTGAAATGAAAGAAA
TGCCAAGAAATATCCACTGTTTAGATTTGCCCTCACTCTCTGTCTCTGTCTCTCTGTCTCTGTC
TCTGTCTCTCTCTCCTCTCTCTCTCCTCTCCTCTCTCTCTCTCTCTCCATCTCTCTCTCTCTCT
CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCATGTCCCTTATTTAG
CATAACAAAGTAGATGGGAAAATACTCTTGACTCTGGGCTACCCAATAGCTCTGGGATTAAACC
CAGCATTTCCCACTACTACCAGCTAACCCTTGGGTTTGTCTATTGTTTGACCCCATTCTGTAGC
CAATCAGAGCCTCTCTGTGGGATGAAAACTGATATAGCAGATCATATACACGTAGCCCAAAGTA
AGACCCAGAGACTACAGAAACTACACCAAAAATGTCACATAGTCCTGACACTTAATGGGAAATG
ATGCCAAGTATGGGCACTGTGCCAGAAAAGGGAATTTCAAAGTGCACAGATGCTTGAGTGCTCT
GGTCCACTAGCTGGAGACTTGGGAGAGAAGTCTGCAGCCATAGGGCATGAATTTGCAGTATTTT
ACTGTAGGTTTTCTCTTCTCCTTTGAAGTTTCTATTTTACAATATTTTGAGAGTTTTAAAAATA
ATCCTATCACATCTGGCCCAGACCCAGATAATGTATTCTATCATTTCCATTGAGCTGTAAGAGA
CTTTGCCCTTACTATTTTAATATCCTGGATTTAATTAAAACTCCCGTTGGTTCGTCACAAATGA
AAACTTGTTTTTGATAGTTTTATAAAACTGATACTGATGTCATTAAAAAAATTTGTTTTTACAC
CAGCAACTTTTTGTTTTTACATTCTTGGTGTAATGTATCCCTCCATCTTGTCTTTTTGTTTAGA
GCAGGTCCATTTGAACCAAGCAGACAGACCTATTAATGGGCAGCAATGACCTTACCTTTAAGGA
ATCCAGAGGCTTGAGGGGGCACTCACACTGAGGAAGTGTGATGTACTGTAGTGTCTTTTTCTAG
AGATGAGTAGTGGAAGTCTTGCTGGGTTGGCATTTAAAGCAGAAAATGAAATGCCTGCATTGCT
AGTGATGCAGCCCAGAGCAAGGGTTTCACTTCTGCAAAGCAGTGACCTCGCAAGAGACATTGTG
TCTGTCGAGCTATGCTGGACCTCCCTGGCTCATTCTGATAGAGGATATACAAACAAACACAAGG
AAATTGAGCTTACAAAGAGCCATTCTTCTGAGTCGCTGTCTGTCTGTCTGTCTGTCTGTCTGTC
TGTCTACCTACCTTCCTGTCTCCCCGCCTCACCGGTTTCCTACCCCTGTCCAACAAGACCAAAT
TTTTTAAAGAAATAACTTTTGAAAACTGAAATTTTTATGTATTTTTGTTATCTCATCAATGTTC
ACCGCATCACTTTCTGAGGAGAAGATGTTTTTAGTAGTTTCAGTTGCTCAGTGCTTTTATCTAA
ATGCAGTGTTTTCAGACTGTGTATTAACCACAGCCACATGTTTGATTGCGCCTCCCTAGTCACT
GGTGTCTGCCTATCTTTGGTAAATTCATTACCATCTCCAAATTGCCTAAAGTCCTAGTAAATAA
TAGCTCAGGGGATTTCTATTCATCACTACTAGAAGGGCGCTGTGGTATGCTTTGGTACTTTGGG
CAGTGAGCAGCTGCGGGACTTGTCATTGCTCTAGAACAAGAACACCGGATGGATCTGCCACACT
AGTCGTGTTTCACACTGTGGAGCAGTTTGGCTTGTGCATCCGTGGCGCTTGTTGAGGAACTCAT
CCCTTTGTGGTGTCGTAACATGACGGTAGAGTGCCTTTTTATATTTGTATATCCTGGAAACGTT
CTGTGAAACATTTTGTATTTTTTCATTTGAGTGTTATCGGAGCAATATAATCCTAGTGGGCTTT
TCTTTCTTTGACTGTACCAAGTGTCGCCTTTCCTCTTCCTCCCCTTCTCTGCTGTGAAATGAAA
ATGCTCAAGTTTTCTATAGGAATTATGTTTGACTTTGCAGTACTGAAATGCTTTCTTCTTACCG
AACTGTAAACCATAGGTCAGTATTATAGGAGGACAGCGTTTTAAGATAGTGACAATCTGAGCGT
GTTTGTAAGATGTAATTCTGTGTGTTTCCTACCCGGTGATCTGAAGACTCGAGGCGAGGATCTT
TTGTTTAGCAGTTTTGTCTCCAGACCACGCTTCAGCATGTGCAATATATCCTTGCAAAGCACGG
TGATACACATCTTATGCCAGTGTTACATTTTGTAAAACGTGTTTGTAACAGCATAAACTATTAT
GTGATGATTTCAGTGGGATTTTTTCGTCTGTAATTTTAAGATGTAGATTGGAGTTGAGTGACTT
TGGTAAACGTCCTGAGTGTAAAAAATGAGGAAAAATGGCATTGGGTTCAGTGAAGGACTTTGGA
CCAGTGTGAATCTTCCCAAGCACAGGTTAATACTTTCCCAACTACTGAGTGCTCTAATATGCAA
TGAAGTACTTACCTGTAACATACGATGGACATGCATTCAGATGGTTATTTTTACAAATAAAAAC
GGTACAAATATTGTTGCAAAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_017596351 ⟹ XP_017451840

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	63,621,200 - 63,921,999 (-)	NCBI
mRatBN7.2	9	56,126,746 - 56,427,661 (-)	NCBI
Rnor_6.0	9	61,231,721 - 61,529,532 (-)	NCBI

Sequence:

show sequence

GCTGGCAGCGGCCGGCACTTCCTGTATAAAGGCGGGCGGGCCGGGCTGCGACTCCCGCGAGCCG
GGGCTGGGCTCTGGGAGGCAGGCGGCAGCGGCCGAGCGGTGGCAGGGCTGTCACCTTCGCGAGC
CCAGCTCCTGGCGCTTCCCCGGGCCGTCCCTTCCGTTTCTCCGGGCTCCCGGCGTTGACATCTA
CGAAGCGGAGAGCTGTATGTGCGCGCGCGCGGGAACGGAAGAATGGCAGTGCTCAAACTCTGCG
ATCAGCCACCTCTGGTCCAGGCAATCTTCAGTGGCGACCCAGAGGAGATTCGCCTGCTCATCCA
TAAGACTGAAGATGTGAACGCACTGGATTCTGAGAAACGAACCCCGCTTCATGTGGCTGCATTC
CTGGGAGATGCAGAGATCATCGAGCTCCTGATTTTGTCAGGAGCTCGCGTAAATGCCAAGGACA
ACATGTGGCTGACCCCACTGCACCGGGCTGTTGCTTCCAGAAGTGAAGAGGCAGTGCAAGTATT
GATTAAACACTCGGCTGACGTCAATGCAAGGGACAAGAATTGGCAGAGCCCCGTCCATGTGGCA
GCAGCCAATAAGGCTGTCAAGTGTGCAGAAGTGATCATTCCACTCCTGAGCAGTGTCAATGTCT
CTGACAGAGGGGGACGCACAGCCTTGCACCATGCGGCTCTGAACGGACACATGGAGATGGTCAA
TTTACTCTTGGCCAAAGGGGCAAACATCAATGCATTTGACAAGAAGGACCGGCGTGCTCTCCAC
TGGGCAGCATACATGGGCCACCTGGATGTTGTGGCACTGCTCATTAACCATGGCGCAGAAGTGA
CCTGCAAGGATAAGAAGGGCTATACCCCACTGCACGCTGCAGCCTCCAATGGGCAGATCAATGT
TGTCAAACATCTCCTGAACCTGGGGGTGGAGATTGATGAAATCAATGTCTATGGAAACACAGCA
CTTCACATTGCCTGCTACAATGGCCAGGATGCTGTCGTTAATGAGCTGATCGACTACGGCGCTA
ACGTGAACCAGCCTAACAACAGTGGCTTCACCCCTCTGCACTTTGCAGCGGCGTCTACTCACGG
TGCTCTGTGTCTGGAACTGTTAGTCAACAATGGGGCCGATGTGAACATTCAGAGTAAGGATGGC
AAAAGTCCTCTGCACATGACGGCTGTCCATGGGCGGTTCACACGGTCACAAACCCTCATTCAGA
ATGGAGGTGAAATCGACTGTGTGGATAAGGATGGCAACACACCTCTCCATGTGGCTGCAAGATA
TGGTCACGAGCTCCTGATTAACACCCTAATAACTAGCGGAGCTGACACAGCCAAGTGTGGAATC
CATAGCATGTTCCCCCTCCATTTAGCTGCCCTAAATGCTCACTCTGACTGCTGCAGGAAGTTGT
TATCCTCTGGACAAAAGTATAGCATAGTGTCCTTGTTTAGTAATGAGCACGTGCTGTCTGCAGG
CTTTGAAATAGACACCCCAGATACGTTTGGAAGAACGTGCCTCCACGCCGCTGCTGCAGGAGGC
AATGTAGAATGTATAAAGCTCTTGCAGAGCAGCGGAGCGGATTTTCACAAAAAGGACAAATGTG
GGAGGACCCCTTTGCACTATGCAGCTGCAAATTGTCATTTCCACTGTATTAAAGCATTAGTGAC
CACCGGAGCCAATATCAATGAAACAGACAACTGGGGACGGACAGCTTTGCACTACGCTGCTGCA
TCAGACATGGATAGAAATAAGATGATCTTAGGCAACGCCCATGACAATTCTGAAGAACTTGAAA
GGGCCAGGGAAGTGAAGGGGAAGGACGCCGCGCTATGTCTAGAGTTTCTGCTTCAGAACGATGC
AAACCCATCCATCCGGGACAAGGAAGGCTACAATAGCATCCATTATGCTGCGGCCTATGGCCAC
AGGCAGTGTCTAGAACTGCTTTTGGAAAGAACCAACACTGGTTTTGAAGAATCAGACGGCGGTG
CTCTCAAGAGTCCACTCCACTTAGCGGCCTACAATGGGCACCACCAAGCCTTGGAGGTCCTTCT
CCAGTCCCTAGTGGACCTGGACATCAGGGATGAGAAAGGCCGGACGGCCCTGTACCTAGCTGCT
TTCAAGGGACACACAGAATGTGTGGAAGCACTTGTTAACCAGGGCGCATCCATCTTCGTGAAAG
ACAATGTCACCAAAAGAACTCCACTTCATGCCTCGGTTATTAATGGTCACACGCTGTGTTTGAG
GCTACTACTTGAAATAGCGGACAACCCGGAAGTGGTTGATGTGAAGGATGCCAAGGGACAAACC
CCACTGATGCTTGCAGTAGCATATGGACACATTGATGCCGTTTCGTTGTTACTTGAAAAGGAAG
CAAACGTAGATGCTGTTGACACAGTGGGCTGCACAGCTTTACATAGAGGGATCATGACAGGACA
TGAGGAATGTGTGCAAATGCTGCTGGAACAAGAAGCATCCATCCTCTGTAAAGACTCCAGAGGG
AGGACACCCCTGCACTATGCCGCTGCCCGGGGCCACGCCACGTGGCTGAATGAGTTGGTCCAGA
TTGCGCTTTCTGAAGAGGACTGTTGCCTCAAAGACAACCAGGGATACACGCCGCTGCACTGGGC
CTGTTACAATGGTAATGAAAATTGCATAGAGGTACTTTTGGAGCAAAAATGTTTTCGAAAATTT
ATTGGTAATCCCTTCACTCCACTGCACTGTGCAATAATAAACGGTCATGAGAGCTGTGCATCAC
TGCTCCTGGGGGCCATAGATTCCAGCATTGTCAGCTGTAGGGATGACAAAGGCAGGACAACCCT
CCATGCGGCAGCCTTTGGGGATCATGCAGAATGCTTGCAGCTGCTTCTGAGGCATGACGCTCAA
GTGAATGCCGTAGATAATTCAGGGAAAACAGCGCTGATGATGGCCGCTGAGAACGGGCAGGCAG
GCGCTGTGGATATTTTGGTGAACAGTGCCCAGGCTGACCTGACTGTGAAAGATAAGGACCTGAA
CACGCCCTTGCACCTGGCTATCAGTAAAGGCCATGAGAAATGTGCCTTGTTAATACTTGACAAG
ATACAAGACGAGAGCCTTATCAACGCGAAAAACAGTGCATTGCAGACACCCCTCCATATTGCTG
CACGCAATGGCTTGAAGGTGGTAGTTGAGGAGCTGCTGGCTAAAGGAGCCTGTGTACTTGCCGT
AGATGAAAATGGTCATACCCCGGCCCTGGCTTGTGCTCCTAACAAAGACGTGGCTGACTGCCTG
GCCCTCATTCTGGCTACCATGATGACTTTTTCTCCTTCCAGTACAATGACGGCTGTCAACTTCG
TTTATTTTAGAAAAGACAATTTGAGCAGAAGGACCCTCTCCAATATGGGTAGTAGGGTTAGTCT
GTGCAGTAACAATTTGGACTCTGAGGGTGGGTACAATGAAAATGATTCTGACTCGGAAACATTC
TAAGTTTGGGCTGTAGAGGTGTTTCCCCCAATACTCCTGTTTCAGGAAGGGACGGAAGCCTGAA
TTCCAGGTTACATTGTATTCAGGCATTTGAGACCAAGCTTCCAGAAGCCAGCAGAAAAGGAGTC
AGTCTAACCAAAAGAGGGCAACTAAGATACTTCTATGAAAGTCTACCTCTCATTTTAAGTAAGG
ACAAAAAATTAAGTATCCCTCATCTTTGGGGATAATACAACAGAGAGACAAATATTCAGTCTAA
AGATTTCTTTTTCCCCCTACATACTCACCAGTGAGTTGTGTGAGGTTGGTCAAGGTGACATTCA
TGTCCCTTGGGAGGGGTGGGAAGAGGAAATGGGAAATGCCTAGACCCTCTTCTCACTCTGATGT
TTACTTTCTCACTAGAAGTCAAAGGTCAAGGTTCATCTTTAGACATGCCTGTAATCGCCCTCTT
AAGGGAGTCTACCTGACCCCGCCTCCTCCGTAGGAAGTTTGTAAATGCCTAGAACTTCTTCCTA
GGGTCTTGGTTAAAGTTGCCAGATGAATGTGAACATGGTTCATGCTCTTTTGTTAATCACAAAT
GAAATAGCTCCCGGGGCTCCACATAAGAAACATGTGAGTCATTTTTCAGTGGAGTAATGGATCC
CAAATTTACCCAATAGCATTTCAGGTGAAATTATATTGTGCCAAAACTTGAAACAATATGCAAG
TCAAATAGGAAATTACTGTTCGTTGAATTTGCTCTAAAATGAAAATTCTAACTTTGTAACGGCA
TCAGAATGGCTGGTACTGTCCTTCAGTGGTTGGATAGCAAATTAGCTGCTCAGCCAAGGTCATG
CCACACGAGTGACAGTGAAAAGGAACCAAGGAAATGACAGCAGGAAGCAGAAATGCTTGGTGTG
GAAGTGCAAACCAATTGCCAGTTGTTTGGTAATGAAATCAGCATTGTGAATACTGTGTCTGCTC
CCTCTGCCAAAGCTTCTAGGTCGAATGGACCCCGTTCTCCACCTGGAACAGCTGTACGAAAAGA
AGAATGAGACTTTAAGAATTATGCACATACACATGCACACATGTGTGTATATTTATGTATGTAC
TTCATCAACCAGCTATCCATGAGGACCAAAATGCTTCTGCTTAAACTGGGATGTTCTAAGTGTT
TTTTTCTTTCTACATGCAAGTGAGAACTGCAGTAACTTTTCTATGGGGTTAAAATGTAATCGTT
TTACATACCAGTCTTTATTGTATTTTATATTTCTAATGACACAGATTTCTAGTTGATAGCTTGA
CATTTGTAACCGATGATGTGTTGACCACAGGTTTTTGTTTTCAGACTAGAGAATATGTCTGTAT
ACTTTGATGTAAATGTGTTTCTATTTATTTGAAATGAAAGAAATGCCAAGAAATATCCACTGTT
TAGATTTGCCCTCACTCTCTGTCTCTGTCTCTCTGTCTCTGTCTCTGTCTCTCTCTCCTCTCTC
TCTCCTCTCCTCTCTCTCTCTCTCT

hide sequence

RefSeq Acc Id:

XM_039083293 ⟹ XP_038939221

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	63,621,200 - 63,921,995 (-)	NCBI
mRatBN7.2	9	56,126,746 - 56,427,651 (-)	NCBI

RefSeq Acc Id:

XM_039083295 ⟹ XP_038939223

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	63,621,200 - 63,921,995 (-)	NCBI
mRatBN7.2	9	56,126,746 - 56,427,652 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_001178736	(Get FASTA)	NCBI Sequence Viewer
	XP_017451840	(Get FASTA)	NCBI Sequence Viewer
	XP_038939221	(Get FASTA)	NCBI Sequence Viewer
	XP_038939223	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDL99058	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000015432.9
	ENSRNOP00000070078
	ENSRNOP00000070078.3
	ENSRNOP00000091674
	ENSRNOP00000091674.2
	ENSRNOP00000105631.1
	ENSRNOP00000106935.1
	ENSRNOP00000109772.1
	ENSRNOP00000110743.1

RefSeq Acc Id:

NP_001178736 ⟸ NM_001191807

- UniProtKB:

F1LZH9 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MAVLKLCDQPPLVQAIFSGDPEEIRLLIHKTEDVNALDSEKRTPLHVAAFLGDAEIIELLILSG
ARVNAKDNMWLTPLHRAVASRSEEAVQVLIKHSADVNARDKNWQSPVHVAAANKAVKCAEVIIP
LLSSVNVSDRGGRTALHHAALNGHMEMVNLLLAKGANINAFDKKDRRALHWAAYMGHLDVVALL
INHGAEVTCKDKKGYTPLHAAASNGQINVVKHLLNLGVEIDEINVYGNTALHIACYNGQDAVVN
ELIDYGANVNQPNNSGFTPLHFAAASTHGALCLELLVNNGADVNIQSKDGKSPLHMTAVHGRFT
RSQTLIQNGGEIDCVDKDGNTPLHVAARYGHELLINTLITSGADTAKCGIHSMFPLHLAALNAH
SDCCRKLLSSGFEIDTPDTFGRTCLHAAAAGGNVECIKLLQSSGADFHKKDKCGRTPLHYAAAN
CHFHCIKALVTTGANINETDNWGRTALHYAAASDMDRNKMILGNAHDNSEELERAREVKGKDAA
LCLEFLLQNDANPSIRDKEGYNSIHYAAAYGHRQCLELLLERTNTGFEESDGGALKSPLHLAAY
NGHHQALEVLLQSLVDLDIRDEKGRTALYLAAFKGHTECVEALVNQGASIFVKDNVTKRTPLHA
SVINGHTLCLRLLLEIADNPEVVDVKDAKGQTPLMLAVAYGHIDAVSLLLEKEANVDAVDTVGC
TALHRGIMTGHEECVQMLLEQEASILCKDSRGRTPLHYAAARGHATWLNELVQIALSEEDCCLK
DNQGYTPLHWACYNGNENCIEVLLEQKCFRKFIGNPFTPLHCAIINGHESCASLLLGAIDSSIV
SCRDDKGRTTLHAAAFGDHAECLQLLLRHDAQVNAVDNSGKTALMMAAENGQAGAVDILVNSAQ
ADLTVKDKDLNTPLHLAISKGHEKCALLILDKIQDESLINAKNSALQTPLHIAARNGLKVVVEE
LLAKGACVLAVDENASRSNGPRSPPGTAVRKEE

hide sequence

RefSeq Acc Id:	XP_017451840 ⟸ XM_017596351
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I6AGL0 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAVLKLCDQPPLVQAIFSGDPEEIRLLIHKTEDVNALDSEKRTPLHVAAFLGDAEIIELLILSG ARVNAKDNMWLTPLHRAVASRSEEAVQVLIKHSADVNARDKNWQSPVHVAAANKAVKCAEVIIP LLSSVNVSDRGGRTALHHAALNGHMEMVNLLLAKGANINAFDKKDRRALHWAAYMGHLDVVALL INHGAEVTCKDKKGYTPLHAAASNGQINVVKHLLNLGVEIDEINVYGNTALHIACYNGQDAVVN ELIDYGANVNQPNNSGFTPLHFAAASTHGALCLELLVNNGADVNIQSKDGKSPLHMTAVHGRFT RSQTLIQNGGEIDCVDKDGNTPLHVAARYGHELLINTLITSGADTAKCGIHSMFPLHLAALNAH SDCCRKLLSSGQKYSIVSLFSNEHVLSAGFEIDTPDTFGRTCLHAAAAGGNVECIKLLQSSGAD FHKKDKCGRTPLHYAAANCHFHCIKALVTTGANINETDNWGRTALHYAAASDMDRNKMILGNAH DNSEELERAREVKGKDAALCLEFLLQNDANPSIRDKEGYNSIHYAAAYGHRQCLELLLERTNTG FEESDGGALKSPLHLAAYNGHHQALEVLLQSLVDLDIRDEKGRTALYLAAFKGHTECVEALVNQ GASIFVKDNVTKRTPLHASVINGHTLCLRLLLEIADNPEVVDVKDAKGQTPLMLAVAYGHIDAV SLLLEKEANVDAVDTVGCTALHRGIMTGHEECVQMLLEQEASILCKDSRGRTPLHYAAARGHAT WLNELVQIALSEEDCCLKDNQGYTPLHWACYNGNENCIEVLLEQKCFRKFIGNPFTPLHCAIIN GHESCASLLLGAIDSSIVSCRDDKGRTTLHAAAFGDHAECLQLLLRHDAQVNAVDNSGKTALMM AAENGQAGAVDILVNSAQADLTVKDKDLNTPLHLAISKGHEKCALLILDKIQDESLINAKNSAL QTPLHIAARNGLKVVVEELLAKGACVLAVDENGHTPALACAPNKDVADCLALILATMMTFSPSS TMTAVNFVYFRKDNLSRRTLSNMGSRVSLCSNNLDSEGGYNENDSDSETF hide sequence

Ensembl Acc Id:

ENSRNOP00000070078 ⟸ ENSRNOT00000078800

Ensembl Acc Id:

ENSRNOP00000015432 ⟸ ENSRNOT00000015432

RefSeq Acc Id:	XP_038939223 ⟸ XM_039083295
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038939221 ⟸ XM_039083293
- Peptide Label:	isoform X2

Ensembl Acc Id:

ENSRNOP00000091674 ⟸ ENSRNOT00000101355

Ensembl Acc Id:

ENSRNOP00000110743 ⟸ ENSRNOT00000157275

Ensembl Acc Id:

ENSRNOP00000109772 ⟸ ENSRNOT00000156337

Ensembl Acc Id:

ENSRNOP00000106935 ⟸ ENSRNOT00000145325

Ensembl Acc Id:

ENSRNOP00000105631 ⟸ ENSRNOT00000169163

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-F1LZH9-F1-model_v2	AlphaFold	F1LZH9	1-993	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1561893	AgrOrtholog
BioCyc Gene	G2FUF-27541	BioCyc
Ensembl Genes	ENSRNOG00000021384	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000015432.9	UniProtKB/TrEMBL
	ENSRNOT00000078800	ENTREZGENE
	ENSRNOT00000078800.3	UniProtKB/TrEMBL
	ENSRNOT00000101355	ENTREZGENE
	ENSRNOT00000101355.2	UniProtKB/TrEMBL
	ENSRNOT00000145325.1	UniProtKB/TrEMBL
	ENSRNOT00000156337.1	UniProtKB/TrEMBL
	ENSRNOT00000157275.1	UniProtKB/TrEMBL
	ENSRNOT00000169163.1	UniProtKB/TrEMBL
Gene3D-CATH	1.25.40.20	UniProtKB/TrEMBL
InterPro	Ankyrin_rpt	UniProtKB/TrEMBL
	Ankyrin_rpt-contain_sf	UniProtKB/TrEMBL
NCBI Gene	301415	ENTREZGENE
PANTHER	ANKYRIN REPEAT AND PROTEIN KINASE DOMAIN-CONTAINING PROTEIN	UniProtKB/TrEMBL
	SERINE_THREONINE-PROTEIN PHOSPHATASE 6 REGULATORY ANKYRIN REPEAT SUBUNIT A	UniProtKB/TrEMBL
Pfam	Ank	UniProtKB/TrEMBL
	Ank_2	UniProtKB/TrEMBL
	Ank_4	UniProtKB/TrEMBL
PhenoGen	Ankrd44	PhenoGen
PRINTS	ANKYRIN	UniProtKB/TrEMBL
PROSITE	ANK_REP_REGION	UniProtKB/TrEMBL
	ANK_REPEAT	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000021384	RatGTEx
SMART	ANK	UniProtKB/TrEMBL
Superfamily-SCOP	ANK	UniProtKB/TrEMBL
UniProt	A0A0G2JWZ9_RAT	UniProtKB/TrEMBL
	A0A8I6AGL0	ENTREZGENE, UniProtKB/TrEMBL
	A0ABK0LG50_RAT	UniProtKB/TrEMBL
	A0ABK0LIL1_RAT	UniProtKB/TrEMBL
	A0ABK0LPV5_RAT	UniProtKB/TrEMBL
	A0ABK0LR52_RAT	UniProtKB/TrEMBL
	F1LZH9	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2008-02-29	Ankrd44	ankyrin repeat domain 44	RGD1561893_predicted	similar to hypothetical protein DKFZp434D2328 (predicted)	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2006-03-07	RGD1561893_predicted	similar to hypothetical protein DKFZp434D2328 (predicted)	LOC301415	similar to hypothetical protein DKFZp434D2328	Symbol and Name status set to approved	1299863	APPROVED
2006-02-09	LOC301415	similar to hypothetical protein DKFZp434D2328			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar