Pacrg (parkin coregulated) - Rat Genome Database

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Gene: Pacrg (parkin coregulated) Rattus norvegicus
Analyze
Symbol: Pacrg
Name: parkin coregulated
RGD ID: 1561027
Description: Predicted to enable several functions, including cytoskeletal protein binding activity; heat shock protein binding activity; and ubiquitin protein ligase binding activity. Predicted to be involved in flagellated sperm motility. Predicted to act upstream of or within intracellular protein localization and spermatid development. Predicted to be located in several cellular components, including glial cell projection; microtubule cytoskeleton; and sperm midpiece. Predicted to be active in several cellular components, including axonemal B tubule inner sheath; cytosol; and sperm flagellum. Orthologous to human PACRG (parkin coregulated); INTERACTS WITH 6-propyl-2-thiouracil; acrylamide; atrazine.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: LOC499021; Park2 co-regulated; parkin co-regulated gene protein; RGD1561027; similar to PACRG
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8152,430,390 - 52,853,272 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl152,430,284 - 52,853,269 (+)EnsemblGRCr8
mRatBN7.2149,882,671 - 50,305,564 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl149,882,630 - 50,305,430 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx150,601,669 - 51,024,246 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0156,586,115 - 57,008,760 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0150,677,192 - 51,099,755 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Dahl_SR_JrHsd152,123,617 - 52,545,940 (+)NCBIDahl_SR_JrHsd
Lyon_Normotensive151,467,140 - 51,890,038 (+)NCBILyon_Normotensive
Lyon_Hypertensive152,636,027 - 53,058,925 (+)NCBILyon_Hypertensive
F344_StmMcwi150,853,950 - 51,276,437 (+)NCBIF344_StmMcwi
Rnor_6.0150,070,273 - 50,491,323 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0152,077,687 - 52,078,064 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4144,374,745 - 44,836,465 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera145,667,177 - 46,086,043 (+)NCBICelera
Cytogenetic Map1q11NCBI
JBrowse:




Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
axonemal B tubule inner sheath  (IEA,ISO)
axonemal microtubule  (IEA,ISO)
cell body  (IEA,ISO)
cilium  (IEA,ISO)
cytosol  (IBA,IEA,ISO)
manchette  (IEA,ISO)
neuron projection  (IBA,IEA,ISO)
sperm end piece  (IEA,ISO)
sperm flagellum  (IEA,ISO)
sperm midpiece  (IEA,ISO)
sperm principal piece  (IEA,ISO)
vesicle  (IBA,IEA,ISO)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:12477932   PMID:14532270   PMID:15148410   PMID:18614015   PMID:19463890   PMID:21630459  


Genomics

Comparative Map Data
Pacrg
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8152,430,390 - 52,853,272 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl152,430,284 - 52,853,269 (+)EnsemblGRCr8
mRatBN7.2149,882,671 - 50,305,564 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl149,882,630 - 50,305,430 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx150,601,669 - 51,024,246 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0156,586,115 - 57,008,760 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0150,677,192 - 51,099,755 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Dahl_SR_JrHsd152,123,617 - 52,545,940 (+)NCBIDahl_SR_JrHsd
Lyon_Normotensive151,467,140 - 51,890,038 (+)NCBILyon_Normotensive
Lyon_Hypertensive152,636,027 - 53,058,925 (+)NCBILyon_Hypertensive
F344_StmMcwi150,853,950 - 51,276,437 (+)NCBIF344_StmMcwi
Rnor_6.0150,070,273 - 50,491,323 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0152,077,687 - 52,078,064 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4144,374,745 - 44,836,465 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera145,667,177 - 46,086,043 (+)NCBICelera
Cytogenetic Map1q11NCBI
PACRG
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh386162,727,132 - 163,315,500 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl6162,727,132 - 163,315,500 (+)Ensemblhg38GRCh38
GRCh376163,148,164 - 163,736,532 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 366163,068,154 - 163,656,514 (+)NCBIBuild 36Build 36hg18NCBI36
Build 346163,118,574 - 163,706,934NCBI
Celera6163,877,766 - 164,466,475 (+)NCBICelera
Cytogenetic Map6q26NCBI
HuRef6160,600,313 - 161,189,795 (+)NCBIHuRef
CHM1_16163,410,401 - 163,998,862 (+)NCBICHM1_1
T2T-CHM13v2.06164,090,091 - 164,679,096 (+)NCBIT2T-CHM13v2.0
Pacrg
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391710,621,938 - 11,059,078 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1710,621,941 - 11,059,198 (-)EnsemblGRCm39 EnsemblGRCm39
GRCm381710,403,009 - 10,840,191 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1710,403,012 - 10,840,311 (-)Ensemblmm10GRCm38
MGSCv371710,595,878 - 11,033,057 (-)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv361710,246,499 - 10,683,544 (-)NCBIMGSCv36mm8
Celera1710,441,554 - 10,880,474 (-)NCBICelera
Cytogenetic Map17A1NCBI
cM Map177.8NCBI
Pacrg
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495543918,153,227 - 18,663,780 (-)Ensembl
ChiLan1.0NW_00495543918,152,719 - 18,664,026 (-)NCBIChiLan1.0ChiLan1.0
PACRG
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v25182,912,865 - 183,553,556 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan16180,814,329 - 181,454,813 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v06160,677,517 - 161,261,350 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.16165,678,258 - 166,258,530 (+)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl6165,679,339 - 166,258,025 (+)EnsemblpanPan2panpan1.1
PACRG
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1151,202,146 - 51,717,076 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl151,202,164 - 51,717,070 (+)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha152,042,126 - 52,559,011 (+)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.0151,381,655 - 51,894,296 (+)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl151,381,776 - 51,894,290 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1151,268,088 - 51,784,734 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0151,126,867 - 51,644,730 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0151,751,636 - 52,272,877 (+)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Pacrg
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404946146,076,108 - 146,535,336 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493648913,328,078 - 13,787,344 (+)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_00493648913,328,143 - 13,787,329 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PACRG
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl14,967,224 - 5,465,064 (-)EnsemblsusScr11Sscrofa11.1
Sscrofa11.114,964,686 - 5,465,258 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.216,680,425 - 6,931,058 (-)NCBISscrofa10.2Sscrofa10.2susScr3
PACRG
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11390,329,583 - 90,937,143 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366604062,209,867 - 62,816,954 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Pacrg
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462485599,475 - 430,105 (-)NCBIHetGla 1.0HetGla 1.0hetGla2

Variants

.
Variants in Pacrg
2686 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:36
Count of miRNA genes:32
Interacting mature miRNAs:35
Transcripts:ENSRNOT00000023046
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1331732Srn4Serum renin concentration QTL 44.467renin activity (VT:0005581)plasma renin activity level (CMO:0000116)14345783787558729Rat
631688Hcas2Hepatocarcinoma susceptibility QTL 230.0001liver integrity trait (VT:0010547)liver tumorous lesion number (CMO:0001068)1774611852746118Rat
1578649Bmd8Bone mineral density QTL 84.9femur mineral mass (VT:0010011)trabecular volumetric bone mineral density (CMO:0001729)151940904101229020Rat
1357397Bw41Body weight QTL 414.190.0001body mass (VT:0001259)body weight (CMO:0000012)12940927974409279Rat
634314Niddm44Non-insulin dependent diabetes mellitus QTL 44blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)151941022208479811Rat
1358359Sradr1Stress Responsive Adrenal Weight QTL 14.74adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)139728272132889942Rat
4889929Bss87Bone structure and strength QTL 876.7tibia area (VT:1000281)tibia-fibula cortical bone endosteal cross-sectional area (CMO:0001722)14630261591302615Rat
1331792Rf29Renal function QTL 294.589urine potassium amount (VT:0010539)urine potassium level (CMO:0000128)14345783787558729Rat
2313062Bmd73Bone mineral density QTL 733.90.0001tibia mineral mass (VT:1000283)compact volumetric bone mineral density (CMO:0001730)14630261591302615Rat
1578654Bss10Bone structure and strength QTL 104femur morphology trait (VT:0000559)femoral neck cortical cross-sectional area (CMO:0001702)151940904168768703Rat
8552900Pigfal1Plasma insulin-like growth factor 1 level QTL 17.4blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)14350995288509952Rat
1354643Foco2Food consumption QTL 27.170.0001eating behavior trait (VT:0001431)food intake rate (CMO:0000427)14212296887122968Rat
2313065Bss67Bone structure and strength QTL 673.10.0001tibia area (VT:1000281)tibia total energy absorbed before break (CMO:0001736)14630261591302615Rat
2313069Bss68Bone structure and strength QTL 682.90.0001tibia size trait (VT:0100001)tibia total energy absorbed before break (CMO:0001736)14630261591302615Rat
70225Bp58Blood pressure QTL 583.3arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)134184556172281316Rat
2313075Bss66Bone structure and strength QTL 663.40.0001tibia length (VT:0004357)tibia length (CMO:0000450)14630261591302615Rat
10059597Bp377Blood pressure QTL 3773.420.025arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)134565911208798288Rat
1331778Rf28Renal function QTL 284.66urine potassium amount (VT:0010539)urine potassium excretion rate (CMO:0000761)14345783787558729Rat
2313077Bss69Bone structure and strength QTL 693.50.0001tibia strength trait (VT:1000284)bone polar moment of inertia (CMO:0001558)14630261591302615Rat
2313402Anxrr24Anxiety related response QTL 24aggression-related behavior trait (VT:0015014)tameness/aggressiveness composite score (CMO:0002136)151511344153680016Rat
1578756Iddm22Insulin dependent diabetes mellitus QTL 222.7blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)12050832665508326Rat
1331785Rf27Renal function QTL 274.643urine sodium amount (VT:0006274)urine sodium level (CMO:0000129)13070837587558729Rat
631508Sald1Serum aldosterone level QTL 13.7blood aldosterone amount (VT:0005346)serum aldosterone level (CMO:0000487)11168446456684464Rat
1300172Bp172Blood pressure QTL 1723.56arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)13456572679565726Rat
4889962Bss94Bone structure and strength QTL 943.8tibia area (VT:1000281)tibia-fibula cortical bone endosteal cross-sectional area (CMO:0001722)15190920691302615Rat
4889451Eae29Experimental allergic encephalomyelitis QTL 295.51nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis severity score (CMO:0001419)1774612152746121Rat
1558642Prcr2Prostate cancer resistance QTL 24.3prostate integrity trait (VT:0010571)area of ventral prostate occupied by tumorous lesions to total ventral prostate area ratio (CMO:0000899)11037949255379492Rat
2313092Bmd72Bone mineral density QTL 722.50.0001tibia mineral mass (VT:1000283)total volumetric bone mineral density (CMO:0001728)14630261591302615Rat
2313097Bss70Bone structure and strength QTL 703.50.0001tibia strength trait (VT:1000284)tibia total energy absorbed before break (CMO:0001736)14630261591302615Rat
9589820Insglur3Insulin/glucose ratio QTL 310.750.001blood insulin amount (VT:0001560)calculated plasma insulin level (CMO:0002170)14350995288509952Rat
1354599Bw29Body weight QTL 293.460.001body mass (VT:0001259)body weight (CMO:0000012)14212296887122968Rat
2302038Pia31Pristane induced arthritis QTL 315.50.001blood autoantibody amount (VT:0003725)serum immunoglobulin M-type rheumatoid factor level relative to an arbitrary reference serum (CMO:0002111)11282049457820494Rat
4889919Bss86Bone structure and strength QTL 864.1tibia area (VT:1000281)tibia midshaft total cross-sectional area (CMO:0001715)14630261591302615Rat
8552948Pigfal11Plasma insulin-like growth factor 1 level QTL 114.7blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)14350995288509952Rat
634353Rends2Renal damage susceptibility QTL 20.05kidney blood vessel morphology trait (VT:0000530)organ lesion measurement (CMO:0000677)12065642065656420Rat

Markers in Region
D17Wtc1  
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr8152,643,797 - 52,643,944 (+)Marker Load Pipeline
mRatBN7.2150,096,085 - 50,096,231 (+)MAPPERmRatBN7.2
Rnor_6.0150,280,903 - 50,281,048NCBIRnor6.0
Rnor_5.0149,473,222 - 49,473,367UniSTSRnor5.0
RGSC_v3.4144,590,134 - 44,590,279UniSTSRGSC3.4
Celera145,878,504 - 45,878,649UniSTS
Cytogenetic Map1q11UniSTS
RH128329  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2150,305,340 - 50,305,520 (+)MAPPERmRatBN7.2
Rnor_6.0150,491,230 - 50,491,409NCBIRnor6.0
Rnor_5.0149,266,400 - 49,266,579UniSTSRnor5.0
RGSC_v3.4144,836,372 - 44,836,551UniSTSRGSC3.4
Celera146,085,950 - 46,086,129UniSTS
RH 3.4 Map1595.9UniSTS
Cytogenetic Map1q11UniSTS
UniSTS:234167  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2986,524,322 - 86,524,514 (+)MAPPERmRatBN7.2
mRatBN7.2150,020,767 - 50,020,952 (+)MAPPERmRatBN7.2
Rnor_6.0150,205,621 - 50,205,805NCBIRnor6.0
Rnor_6.0992,895,557 - 92,895,748NCBIRnor6.0
Rnor_5.0992,624,858 - 92,625,049UniSTSRnor5.0
Rnor_5.0149,548,684 - 49,548,868UniSTSRnor5.0
RGSC_v3.4984,590,154 - 84,590,345UniSTSRGSC3.4
RGSC_v3.4144,515,813 - 44,515,997UniSTSRGSC3.4
Celera145,805,255 - 45,805,439UniSTS
Celera983,945,643 - 83,945,834UniSTS
Cytogenetic Map1q11UniSTS
Cytogenetic Map9q35UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
hemolymphoid system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
sensory system
visual system
2 1 17 41 65 126 91 10 41 33 25 17 17

Sequence


Ensembl Acc Id: ENSRNOT00000100980   ⟹   ENSRNOP00000092233
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl152,430,418 - 52,853,269 (+)Ensembl
mRatBN7.2 Ensembl149,882,630 - 50,305,430 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000101907   ⟹   ENSRNOP00000093391
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl152,430,284 - 52,853,142 (+)Ensembl
mRatBN7.2 Ensembl149,882,630 - 50,305,430 (+)Ensembl
RefSeq Acc Id: NM_001389238   ⟹   NP_001376167
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8152,430,390 - 52,853,272 (+)NCBI
mRatBN7.2149,882,671 - 50,305,559 (+)NCBI
Dahl_SR_JrHsd152,123,617 - 52,545,940 (+)NCBI
Lyon_Normotensive151,467,140 - 51,890,038 (+)NCBI
Lyon_Hypertensive152,636,027 - 53,058,925 (+)NCBI
F344_StmMcwi150,853,950 - 51,276,437 (+)NCBI
RefSeq Acc Id: XM_039086904   ⟹   XP_038942832
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8152,615,330 - 52,853,272 (+)NCBI
mRatBN7.2150,067,616 - 50,305,564 (+)NCBI
Protein Sequences
Protein RefSeqs NP_001376167 (Get FASTA)   NCBI Sequence Viewer  
  XP_038942832 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAI27535 (Get FASTA)   NCBI Sequence Viewer  
  EDL83087 (Get FASTA)   NCBI Sequence Viewer  
  EDL83088 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000092233.2
  ENSRNOP00000093391
  ENSRNOP00000093391.2
RefSeq Acc Id: NP_001376167   ⟸   NM_001389238
- UniProtKB: A0A8I6AVE7 (UniProtKB/TrEMBL),   A6KJZ9 (UniProtKB/TrEMBL),   A0A8I6AHI9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038942832   ⟸   XM_039086904
- Peptide Label: isoform X1
- UniProtKB: A6KK00 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSRNOP00000092233   ⟸   ENSRNOT00000100980
Ensembl Acc Id: ENSRNOP00000093391   ⟸   ENSRNOT00000101907

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1561027 AgrOrtholog
BioCyc Gene G2FUF-61546 BioCyc
Ensembl Genes ENSRNOG00000068261 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000100980.2 UniProtKB/TrEMBL
  ENSRNOT00000101907 ENTREZGENE
  ENSRNOT00000101907.2 UniProtKB/TrEMBL
IMAGE_CLONE IMAGE:7133203 IMAGE-MGC_LOAD
InterPro Parkin_co-regulated_protein UniProtKB/TrEMBL
MGC_CLONE MGC:156800 IMAGE-MGC_LOAD
NCBI Gene 499021 ENTREZGENE
PANTHER PARKIN COREGULATED GENE PROTEIN UniProtKB/TrEMBL
  PTHR21207 UniProtKB/TrEMBL
Pfam ParcG UniProtKB/TrEMBL
PhenoGen Pacrg PhenoGen
RatGTEx ENSRNOG00000068261 RatGTEx
UniProt A0A8I6AHI9 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6AVE7 ENTREZGENE, UniProtKB/TrEMBL
  A0JPP9_RAT UniProtKB/TrEMBL
  A6KJZ9 ENTREZGENE, UniProtKB/TrEMBL
  A6KK00 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2017-02-15 Pacrg  parkin coregulated  Pacrg  Park2 co-regulated  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-02-28 Pacrg  Park2 co-regulated  RGD1561027_predicted  similar to PACRG (predicted)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2006-03-07 RGD1561027_predicted  similar to PACRG (predicted)  LOC499021  similar to PACRG  Symbol and Name status set to approved 1299863 APPROVED
2006-02-09 LOC499021  similar to PACRG      Symbol and Name status set to provisional 70820 PROVISIONAL