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Gene: Gabpb1 (GA binding protein transcription factor subunit beta 1) Rattus norvegicus

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Symbol:

Gabpb1

Name:

GA binding protein transcription factor subunit beta 1

RGD ID:

1560391

Description:

Predicted to enable transcription cis-regulatory region binding activity. Predicted to be involved in mitochondrion organization and positive regulation of transcription by RNA polymerase II. Predicted to be active in nucleus. Orthologous to human GABPB1 (GA binding protein transcription factor subunit beta 1); INTERACTS WITH 1,1,1-trichloro-2,2-bis(4-hydroxyphenyl)ethane; 3',5'-cyclic AMP; bisphenol A.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

GA binding protein transcription factor, beta subunit 1; GA repeat binding protein, beta 1; GA-binding protein subunit beta-1; LOC499883; RGD1560391; similar to GA binding protein beta chain (GABP-beta-2 subunit) (GABP-2) (GABP-beta-1 subunit) (GABPB-1) (Transcription factor E4TF1-53) (Transcription factor E4TF1-47) (Nuclear respiratory factor-2); similar to GA binding protein transcription factor, beta subunit 2 (GABPB2)

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	3	134,333,339 - 134,380,239 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	3	134,333,339 - 134,361,344 (-)	Ensembl				GRCr8
mRatBN7.2	3	113,879,972 - 113,924,742 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	3	113,879,973 - 113,923,696 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	3	117,763,645 - 117,808,243 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	3	126,359,180 - 126,403,776 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	3	124,019,556 - 124,064,151 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	3	119,091,739 - 119,135,391 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	3	119,091,744 - 119,135,391 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	3	125,617,852 - 125,661,431 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	3	114,153,730 - 114,197,849 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	3	112,722,551 - 112,766,206 (-)	NCBI		Celera
Cytogenetic Map	3	q36	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,1,1-trichloro-2,2-bis(4-hydroxyphenyl)ethane (EXP)

1,2,4-trichloro-5-(2,5-dichlorophenyl)benzene (ISO)

1,2-dichloroethane (ISO)

1,2-dimethylhydrazine (ISO)

17alpha-ethynylestradiol (ISO)

2,2',4,4',5,5'-hexachlorobiphenyl (ISO)

2,2',5,5'-tetrachlorobiphenyl (ISO)

2,3,7,8-tetrachlorodibenzodioxine (ISO)

2,4,4'-trichlorobiphenyl (ISO)

3',5'-cyclic AMP (EXP)

4-hydroxyphenyl retinamide (ISO)

5-aza-2'-deoxycytidine (ISO)

acrolein (ISO)

aflatoxin B1 (ISO)

all-trans-retinoic acid (ISO)

antimycin A (ISO)

aristolochic acid A (ISO)

arsane (ISO)

arsenic atom (ISO)

benzo[a]pyrene (ISO)

benzo[a]pyrene diol epoxide I (ISO)

beta-lapachone (ISO)

bis(2-ethylhexyl) phthalate (ISO)

bisphenol A (EXP,ISO)

butanal (ISO)

Butylbenzyl phthalate (ISO)

cadmium atom (ISO)

cadmium dichloride (ISO)

chloroprene (ISO)

choline (ISO)

cisplatin (ISO)

copper(II) sulfate (ISO)

crocidolite asbestos (ISO)

cyclosporin A (ISO)

deguelin (ISO)

dicrotophos (ISO)

doxorubicin (EXP)

folic acid (ISO)

formaldehyde (ISO)

gentamycin (EXP)

L-methionine (ISO)

lipopolysaccharide (ISO)

manganese atom (ISO)

manganese(0) (ISO)

manganese(II) chloride (ISO)

MeIQx (ISO)

methyl methanesulfonate (ISO)

N-methyl-4-phenylpyridinium (EXP)

nickel atom (ISO)

okadaic acid (ISO)

ozone (ISO)

paracetamol (ISO)

PCB138 (ISO)

resveratrol (ISO)

rotenone (ISO)

silicon dioxide (ISO)

sodium arsenate (ISO)

sodium arsenite (ISO)

succimer (ISO)

sunitinib (ISO)

thioacetamide (EXP)

thiram (ISO)

titanium dioxide (ISO)

trichostatin A (ISO)

triptonide (ISO)

troglitazone (ISO)

valproic acid (ISO)

vorinostat (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

DNA-templated transcription (IEA)

mitochondrion organization (ISO)

positive regulation of transcription by RNA polymerase II (IBA,ISO)

Cellular Component

nucleoplasm (ISO)

nucleus (IBA,IEA,ISO)

Molecular Function

protein binding (ISO)

transcription cis-regulatory region binding (IBA,ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:9857059	PMID:12477932	PMID:25200183

Genomics

Comparative Map Data

Gabpb1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	3	134,333,339 - 134,380,239 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	3	134,333,339 - 134,361,344 (-)	Ensembl				GRCr8
mRatBN7.2	3	113,879,972 - 113,924,742 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	3	113,879,973 - 113,923,696 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	3	117,763,645 - 117,808,243 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	3	126,359,180 - 126,403,776 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	3	124,019,556 - 124,064,151 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	3	119,091,739 - 119,135,391 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	3	119,091,744 - 119,135,391 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	3	125,617,852 - 125,661,431 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	3	114,153,730 - 114,197,849 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	3	112,722,551 - 112,766,206 (-)	NCBI		Celera
Cytogenetic Map	3	q36	NCBI

GABPB1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	15	50,275,389 - 50,355,198 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	15	50,275,389 - 50,355,440 (-)	Ensembl			hg38	GRCh38
GRCh37	15	50,567,586 - 50,647,395 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	15	48,356,681 - 48,434,687 (-)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	15	48,365,374 - 48,434,687	NCBI
Celera	15	27,461,979 - 27,540,178 (-)	NCBI		Celera
Cytogenetic Map	15	q21.2	NCBI
HuRef	15	27,400,324 - 27,478,454 (-)	NCBI		HuRef
CHM1_1	15	50,687,328 - 50,765,436 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	15	48,083,628 - 48,163,356 (-)	NCBI		T2T-CHM13v2.0

Gabpb1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	2	126,470,832 - 126,527,184 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	2	126,469,362 - 126,518,257 (-)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	2	126,628,907 - 126,684,435 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	2	126,627,442 - 126,676,337 (-)	Ensembl			mm10	GRCm38
MGSCv37	2	126,454,649 - 126,501,223 (-)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	2	126,320,354 - 126,366,928 (-)	NCBI		MGSCv36	mm8
Celera	2	127,867,260 - 127,913,380 (-)	NCBI		Celera
Cytogenetic Map	2	F1	NCBI
cM Map	2	61.76	NCBI

Gabpb1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955409	4,004,480 - 4,039,681 (+)	Ensembl
ChiLan1.0	NW_004955409	3,983,857 - 4,036,433 (+)	NCBI	ChiLan1.0	ChiLan1.0

GABPB1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	16	39,515,370 - 39,611,754 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	15	43,699,514 - 43,779,270 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	15	29,223,588 - 29,303,863 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	15	47,545,767 - 47,627,957 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	15	47,547,202 - 47,600,234 (-)	Ensembl			panPan2	panpan1.1

GABPB1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	30	16,239,321 - 16,303,701 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	30	16,240,677 - 16,303,701 (-)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	30	16,165,398 - 16,230,041 (-)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	30	16,383,196 - 16,447,861 (-)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	30	16,382,276 - 16,447,576 (-)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	30	16,305,719 - 16,370,374 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	30	16,423,353 - 16,487,863 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	30	16,529,799 - 16,594,315 (-)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Gabpb1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024408640	94,492,265 - 94,554,158 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936471	12,340,134 - 12,368,706 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936471	12,340,328 - 12,402,236 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

GABPB1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	1	121,413,506 - 121,489,806 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	1	121,410,276 - 121,488,165 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	1	135,053,552 - 135,129,309 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

GABPB1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	26	32,967,912 - 33,039,114 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	26	33,008,209 - 33,039,689 (+)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666048	108,110,456 - 108,182,710 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Gabpb1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624731	9,761,507 - 9,822,159 (+)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Gabpb1
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	5	105,464,951 - 105,508,108 (-)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Gabpb1
187 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	216
Count of miRNA genes:	153
Interacting mature miRNAs:	169
Transcripts:	ENSRNOT00000045443
Prediction methods:	Microtar, Miranda, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1582233	Insul10	Insulin level QTL 10	5.4	0.0015	blood insulin amount (VT:0001560)	serum insulin level times blood glucose level (CMO:0002040)	3	133259579	178259579	Rat
2301414	Kidm37	Kidney mass QTL 37		0.001	kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	3	96509147	141509147	Rat
1582238	Bw68	Body weight QTL 68	3.2	0.0064	body mass (VT:0001259)	body weight (CMO:0000012)	3	73592512	136118980	Rat
2302373	Gluco39	Glucose level QTL 39	5.01		blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	3	129154923	182114333	Rat
1582239	Epfw1	Epididymal fat weight QTL 1	4.5	0.0006	epididymal fat pad mass (VT:0010421)	epididymal fat pad weight to body weight ratio (CMO:0000658)	3	73592512	136118980	Rat
70216	Cm14	Cardiac mass QTL 14	2.1		heart mass (VT:0007028)	heart wet weight (CMO:0000069)	3	51581665	184004958	Rat
2292591	Esta4	Estrogen-induced thymic atrophy QTL 4			thymus mass (VT:0004954)	thymus wet weight (CMO:0000855)	3	67641776	167835660	Rat
1358362	Srcrt2	Stress Responsive Cort QTL 2	2.78		blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	3	58601291	153936591	Rat
1582216	Bw65	Body weight QTL 65	6.3		body mass (VT:0001259)	body weight (CMO:0000012)	3	122654702	136118980	Rat
737818	Hcar12	Hepatocarcinoma resistance QTL 12	2.6		liver integrity trait (VT:0010547)	volume of individual liver tumorous lesion (CMO:0001078)	3	49872657	138829559	Rat
1582218	Bw74	Body weight QTL 74	3.9	0.0021	body mass (VT:0001259)	body weight (CMO:0000012)	3	73592512	136118980	Rat
1582219	Bw63	Body weight QTL 63	3.8	0.001	body mass (VT:0001259)	body weight (CMO:0000012)	3	116582412	136118980	Rat
1582221	Kidm30	Kidney mass QTL 30	3.5	0.0008	kidney mass (VT:0002707)	both kidneys wet weight (CMO:0000085)	3	85062224	136118980	Rat
1582210	Bw71	Body weight QTL 71	3.3	0.0012	body mass (VT:0001259)	body weight (CMO:0000012)	3	85062224	136118980	Rat
7387306	Bw124	Body weight QTL 124	3.2	0.0003	body mass (VT:0001259)	body weight (CMO:0000012)	3	104545086	149545086	Rat
1578754	Stresp16	Stress response QTL 16	4	0.001	blood renin amount (VT:0003349)	plasma renin activity level (CMO:0000116)	3	133134628	178134628	Rat
1300111	Rf12	Renal function QTL 12	3.78		renal blood flow trait (VT:2000006)	absolute change in renal blood flow rate (CMO:0001168)	3	81425008	141509147	Rat
724523	Tsu1	Thymus enlargement suppressive QTL 1	3.84		thymus mass (VT:0004954)	thymus weight to body weight ratio (CMO:0000612)	3	70845569	136091483	Rat
1600376	Arunc5	Aerobic running capacity QTL 5		0.21	exercise endurance trait (VT:0002332)	longest distance run on treadmill (CMO:0001406)	3	93829559	138829559	Rat
8694437	Bw167	Body weight QTL 167	22.46	0.001	retroperitoneal fat pad mass (VT:0010430)	retroperitoneal fat pad weight to body weight ratio (CMO:0000635)	3	112250810	157250810	Rat
2302273	Gluco35	Glucose level QTL 35	5.3	0.001	blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	3	101255536	134750886	Rat
8662816	Vetf4	Vascular elastic tissue fragility QTL 4	4		renal artery integrity trait (VT:0010642)	number of ruptures of the internal elastic lamina of the renal arteries (CMO:0002563)	3	79649560	177741895	Rat
1581503	Cm58	Cardiac mass QTL 58	2.7	0.05	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	3	96509147	141509147	Rat
1354611	Despr2	Despair related QTL 2	3.03	0.0028	locomotor behavior trait (VT:0001392)	amount of time spent in voluntary immobility (CMO:0001043)	3	117537367	162537367	Rat
2303620	Vencon4	Ventilatory control QTL 4	3.9		respiration trait (VT:0001943)	tidal volume (CMO:0000222)	3	125116475	170116475	Rat
631649	Bp123	Blood pressure QTL 123	3.2		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	3	110225882	155225882	Rat
12879848	Bw181	Body weght QTL 181		0.015	body mass (VT:0001259)	body weight (CMO:0000012)	3	90755164	141509147	Rat
5686842	Rf59	Renal function QTL 59			urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	3	122395989	167395989	Rat
2301971	Cm71	Cardiac mass QTL 71	4.63		heart left ventricle mass (VT:0007031)	heart left ventricle weight (CMO:0000776)	3	131036586	176036586	Rat
1358885	Bp251	Blood pressure QTL 251	3.8		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	3	1	141509147	Rat
2301970	Bw81	Body weight QTL 81	5.19		body mass (VT:0001259)	body weight (CMO:0000012)	3	131036586	176036586	Rat
1581546	Pur13	Proteinuria QTL 13	2.93	0.0335	urine total protein amount (VT:0000032)	urine protein excretion rate (CMO:0000759)	3	98651826	167012663	Rat
631665	Bw8	Body weight QTL 8	5.5		body mass (VT:0001259)	body weight (CMO:0000012)	3	125814931	139636791	Rat
1331758	Bp207	Blood pressure QTL 207	2.848		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	3	110634702	155634702	Rat
1358888	Bp264	Blood pressure QTL 264	4.43		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	3	5675975	141509147	Rat
724532	Cm17	Cardiac mass QTL 17	2		heart mass (VT:0007028)	calculated heart weight (CMO:0000073)	3	116188400	161188400	Rat

Markers in Region

RH130763

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	3	113,880,047 - 113,880,249 (+)	MAPPER	mRatBN7.2
Rnor_6.0	3	119,091,815 - 119,092,016	NCBI	Rnor6.0
Rnor_5.0	3	125,617,928 - 125,618,129	UniSTS	Rnor5.0
RGSC_v3.4	3	114,153,806 - 114,154,007	UniSTS	RGSC3.4
Celera	3	112,722,627 - 112,722,828	UniSTS
RH 3.4 Map	3	988.2	UniSTS
Cytogenetic Map	3	q36	UniSTS

RH137091

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	3	113,901,504 - 113,901,724 (+)	MAPPER	mRatBN7.2
Rnor_6.0	3	119,113,255 - 119,113,474	NCBI	Rnor6.0
Rnor_5.0	3	125,639,259 - 125,639,478	UniSTS	Rnor5.0
RGSC_v3.4	3	114,175,912 - 114,176,131	UniSTS	RGSC3.4
Celera	3	112,744,111 - 112,744,330	UniSTS
RH 3.4 Map	3	987.9	UniSTS
Cytogenetic Map	3	q36	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	165	91	90	59	92	59	6	356	192	11	144	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001039036	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001398923	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001398924	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008762189	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008762190	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017591982	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017591983	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017591984	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039105689	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063284371	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063284372	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063284373	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063284374	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063284375	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063284376	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063284377	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063284378	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	BC098859	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473949	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ212553	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000003	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000045443 ⟹ ENSRNOP00000045035

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	3	134,333,339 - 134,361,344 (-)	Ensembl
mRatBN7.2 Ensembl	3	113,879,973 - 113,923,696 (-)	Ensembl
Rnor_6.0 Ensembl	3	119,091,744 - 119,135,391 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000109155 ⟹ ENSRNOP00000078447

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	3	134,333,339 - 134,361,344 (-)	Ensembl
mRatBN7.2 Ensembl	3	113,879,975 - 113,923,661 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000111964 ⟹ ENSRNOP00000083625

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	3	113,879,975 - 113,923,661 (-)	Ensembl

RefSeq Acc Id:

NM_001039036 ⟹ NP_001034125

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	134,333,339 - 134,377,130 (-)	NCBI
mRatBN7.2	3	113,879,972 - 113,923,766 (-)	NCBI
Rnor_6.0	3	119,091,739 - 119,135,391 (-)	NCBI
Rnor_5.0	3	125,617,852 - 125,661,431 (-)	NCBI
RGSC_v3.4	3	114,153,730 - 114,197,849 (-)	RGD
Celera	3	112,722,551 - 112,766,206 (-)	RGD

Sequence:

show sequence

CCAGACGCGGCATTTTCGGAAAATAGCGCCCTGTGCAGCGAAGCGCTCTGTGTGTGGCGGGGCC
GCGTCAGCCCTGCCGGCTCCGAGGCGCCGCGGTCCCCGCACCTCCTCCCGCTGCTCCCCCGCCG
CCGCTCCCGAAGCTTTTCCAGATGTCCCTGGTAGATTTGGGGAAGAAGCTTTTGGAAGCGGCAC
GGGCAGGCCAAGATGACGAAGTCCGTATTTTGATGGCAAATGGAGCTCCTTTTACCACAGACTG
GCTGGGAACTTCTCCACTTCATCTGGCCGCACAGTATGGGCATTACTCTACCACAGAGGTGCTT
CTCCGAGCCGGTGTAAGTAGAGATGCCAGGACCAAAGTGGACCGGACACCACTGCACATGGCAG
CTTCTGAGGGCCATGCCAGTATAGTAGAGGTTTTGCTTAAGCATGGTGCTGACGTCAATGCAAA
GGATATGTTAAAGATGACAGCTCTGCATTGGGCGACAGAACATAATCATCAAGAGGTGGTGGAG
CTTTTAATCAAATATGGTGCTGATGTACACACGCAGAGTAAATTTTGTAAAACTGCATTTGATA
TTTCAATAGACAATGGAAATGAAGATTTAGCAGAGATATTACAGATTGCTATGCAGAACCAAAT
CAACACCAACCCGGAGAGCCCTGACACTGTGACAATACATGCTGCCACGCCGCAGTTCATCATT
GGACCCGGAGGGGTGGTGAACCTTACAGATGAAACAGGAGTATCTGCTGTTCAGTTTGGAAACT
CCTCTACGTCAGTATTAGCTACATTAGCTGCCTTAGCGGAAGCATCTGCCCCATTGTCCAATTC
TTCAGAGACTCCAGTAGTGGCCACAGAGGAAGTGGTTACCGCAGAATCTGTGGATGGTGCAATT
CAGCAAGTAGTTAGCTCAGGGGGTCAGCAAGTCATCACGATAGTCACAGATGGAATCCAGCTGG
GAAACCTGCACTCCATTCCAACCAGTGGGATGGGTCAGCCCATCATTGTGACCATGCCCGATGG
ACAGCAAGGAGAGAGAAGCGCTTCAGAAACAGCTGGATGAAGCCAACCGAGAGGCCCAGAAGTA
CCGACAGCAGCTGCTTAAGAAGGAGCAGGAGGCAGAGGCCTACAGGCAGAAGCTGGAGGCCATG
ACACGCCTCCAGACCAACAAAGAAGCCGTTTAGTCTCCGTGAACACCTGTTTGCTTTTACCTTT
TGTCCAGAAAGAATGCAGTCTTGAACTGTACACAGTAAGGACACAGCCTTGGGAGTACGAAATG
ATAAAGAGTACTACCGATTGATAATGGGACTTAAGCCATGAGCTCTCAGTTCTTGTAATATAAA
ACTTCAGAACTTGTGAAATGTATTTAAAACTGAATTCTGTAAATAGTTTTTTTGGTTGTTTCTT
TTTTTACAGTTATAAATGAGTTGATAAAGATTGTTGCAGAGATCCAAAAACCACAGTATGCCAC
TGTTATGGGGAATTCTTTTTGATTTGGGTACAGACTCAACTTCTCAGAAACAGAAGTTTTAAGC
GTGATCGTTGTCGATTAGACCAAATGTGTGACAATTATGGTGACTGATGCTGGAAAGACTCTGC
AGAGAGATTTCTCCCAGGAACTTTGTACAGCTTTTAGGTTGTCTCAGGTTCTCTGAAGACATTT
TTTAGGGAGCAGAAATTTTATATTTGTTCAATTTCAGCTACACGCAAGTATACAAGATTTACAT
GTATATGAAGCCAATATTTTTAAAATTTTGTTTGTACATAGTCTGCATGTTTTATGATATTAAA
ACACATCACTTGCTTAGGTATGTTTCCCACAAAGACGATGAAAGTTACCAAGAAAAACAAAGGC
ACCGCTGTCATTTTGTCGGTCATTGAAAGTGAGTAAGCTCGCGACTGGTTTTACTGGCGACCAT
GACGATGTTCTTGGAGCAGCTTGCAAGAAAACTCAATCTGCACTTGTATTGCTTTTCTGGCAAT
TGCAGTGTGAGGACGTGAGACTGCTCTGTGCCTTCCTTCCATCATGACTTCCACACAAGCACTT
TGAGGCGCTGGATCTTAAGATAATGTTTTTAGCAAACTCAGTGCATTTGGGTTTCTGAAATATT
TCATGGACTTACTCCCCTCCCCCTAAGAAATTATTCTTATGGAAAATTGCTTTTGTATGTAGAG
CAGGACCTTTTGTACTCGGTGATGCTATGGGTATGTATAACATAACTTTCGCTGTTCCCTGTGA
ACGCTCCGGGCTTGTGCTGCGACTCACAATATTGTCAGTTCCGAAATGTATGGACATTTGACAG
ACTATTCCACTCTCTTTTGTAAAATGTAACTTTGAACTCTTTATTATTTTGTTTTGTTTTATTG
CTTTTTGGAAATGTTTACCCCCACCCAACCCCCAGGCTCTTCTAGCTTCTCTGTATAAAGAACC
AGTTACCCTCGAGACTGTACTCTGGCCTCATTTTCTATTTTACAATTAAATAACTTTCCACATA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

NM_001398923 ⟹ NP_001385852

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	134,333,339 - 134,377,130 (-)	NCBI
mRatBN7.2	3	113,879,972 - 113,923,766 (-)	NCBI

RefSeq Acc Id:

NM_001398924 ⟹ NP_001385853

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	134,333,339 - 134,377,827 (-)	NCBI
mRatBN7.2	3	113,879,972 - 113,924,463 (-)	NCBI

RefSeq Acc Id:

XM_008762189 ⟹ XP_008760411

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	134,333,339 - 134,376,072 (-)	NCBI
mRatBN7.2	3	113,879,972 - 113,923,391 (-)	NCBI
Rnor_6.0	3	119,091,739 - 119,134,972 (-)	NCBI

Sequence:

show sequence

CGCCGCCCTCCTCGGCTCAGGGCCGCGGCTCCTTGCGGGCCCACGGGCCCGGGTTTCCGTGGGG
TCGCCATGGCCGTGGGGGTACGGGCCGGTGGGGCGAGCGGCCGGACAGGCGTCGCGGCCCCCGC
CCGCTCCTTTGTCTTGGCGGCCTGAAGGCCCGGCCGGGCCCGGCCGACGACAAGAGGGAGGGAA
GGCCGGGCTGCGCCTCCCCGCTGGAGCCCAAGGACCGGGGGCGCTCGGGTTTCGGCGATAACAG
CCGGGCCCGGGCAGGGTAGACCGGACACTCTCGAAGGGAGAGAGCCTGCCATTCTCAGTAGCCG
AGATTTGCCCCGGAGACTTCGCCGCCGGAACCCACGCGAGCGCGGGTGCGGAAAAGAAGCCGCG
AGTTTCGTCGGTCATGTCTTGCCAGGGCACAGATCGGTGTTGTGTGTGCTGTTGTGAACGTCTC
CCACGGTGTTGAAGCCGCGTGCCTAGCTTGAAGTGTGCATCTCCAAAATGAAAGCGAAGTTAAG
CGGGCCTACTTGTTGTGTTTTTCCCTTGGAACTCTTGCTTTAAGCCCATTTCCACTGTGTCTAA
TAGACATTTGTTTAAAGCAGGGAGCGAGACCCATAGTACTTCCGAATGGGAGCTTCATAACGTG
GAAATAATTTTAAAGAGTTCTTTCTCCAGACACTGGTTTTCTGTCTATTCAGATGTCCCTGGTA
GATTTGGGGAAGAAGCTTTTGGAAGCGGCACGGGCAGGCCAAGATGACGAAGTCCGTATTTTGA
TGGCAAATGGAGCTCCTTTTACCACAGACTGGCTGGGAACTTCTCCACTTCATCTGGCCGCACA
GTATGGGCATTACTCTACCACAGAGGTGCTTCTCCGAGCCGGTGTAAGTAGAGATGCCAGGACC
AAAGTGGACCGGACACCACTGCACATGGCAGCTTCTGAGGGCCATGCCAGTATAGTAGAGGTTT
TGCTTAAGCATGGTGCTGACGTCAATGCAAAGGATATGTTAAAGATGACAGCTCTGCATTGGGC
GACAGAACATAATCATCAAGAGGTGGTGGAGCTTTTAATCAAATATGGTGCTGATGTACACACG
CAGAGTAAATTTTGTAAAACTGCATTTGATATTTCAATAGACAATGGAAATGAAGATTTAGCAG
AGATATTACAGATTGCTATGCAGAACCAAATCAACACCAACCCGGAGAGCCCTGACACTGTGAC
AATACATGCTGCCACGCCGCAGTTCATCATTGGACCCGGAGGGGTGGTGAACCTTACAGATGAA
ACAGGAGTATCTGCTGTTCAGTTTGGAAACTCCTCTACGTCAGTATTAGCTACATTAGCTGCCT
TAGCGGAAGCATCTGCCCCATTGTCCAATTCTTCAGAGACTCCAGTAGTGGCCACAGAGGAAGT
GGTTACCGCAGAATCTGTGGATGGTGCAATTCAGCAAGTAGTTAGCTCAGGGGGTCAGCAAGTC
ATCACGATAGTCACAGATGGAATCCAGCTGGGAAACCTGCACTCCATTCCAACCAGTGGGATGG
GTCAGCCCATCATTGTGACCATGCCCGATGGACAGCAAGTATTGACAGTGCCAGCCACAGACAT
TGCTGAAGAAACTGTCATCAGTGAAGAGCCACCAGCTAAGAGACAGTGTATGGAAATAATTGAG
AACCGGGTGGAATCTGCAGAGATTGAAGAGAGAGAAGCGCTTCAGAAACAGCTGGATGAAGCCA
ACCGAGAGGCCCAGAAGTACCGACAGCAGCTGCTTAAGAAGGAGCAGGAGGCAGAGGCCTACAG
GCAGAAGCTGGAGGCCATGACACGCCTCCAGACCAACAAAGAAGCCGTTTAGTCTCCGTGAACA
CCTGTTTGCTTTTACCTTTTGTCCAGAAAGAATGCAGTCTTGAACTGTACACAGTAAGGACACA
GCCTTGGGAGTACGAAATGATAAAGAGTACTACCGATTGATAATGGGACTTAAGCCATGAGCTC
TCAGTTCTTGTAATATAAAACTTCAGAACTTGTGAAATGTATTTAAAACTGAATTCTGTAAATA
GTTTTTTTGGTTGTTTCTTTTTTTACAGTTATAAATGAGTTGATAAAGATTGTTGCAGAGATCC
AAAAACCACAGTATGCCACTGTTATGGGGAATTCTTTTTGATTTGGGTACAGACTCAACTTCTC
AGAAACAGAAGTTTTAAGCGTGATCGTTGTCGATTAGACCAAATGTGTGACAATTATGGTGACT
GATGCTGGAAAGACTCTGCAGAGAGATTTCTCCCAGGAACTTTGTACAGCTTTTAGGTTGTCTC
AGGTTCTCTGAAGACATTTTTTAGGGAGCAGAAATTTTATATTTGTTCAATTTCAGCTACACGC
AAGTATACAAGATTTACATGTATATGAAGCCAATATTTTTAAAATTTTGTTTGTACATAGTCTG
CATGTTTTATGATATTAAAACACATCACTTGCTTAGGTATGTTTCCCACAAAGACGATGAAAGT
TACCAAGAAAAACAAAGGCACCGCTGTCATTTTGTCGGTCATTGAAAGTGAGTAAGCTCGCGAC
TGGTTTTACTGGCGACCATGACGATGTTCTTGGAGCAGCTTGCAAGAAAACTCAATCTGCACTT
GTATTGCTTTTCTGGCAATTGCAGTGTGAGGACGTGAGACTGCTCTGTGCCTTCCTTCCATCAT
GACTTCCACACAAGCACTTTGAGGCGCTGGATCTTAAGATAATGTTTTTAGCAAACTCAGTGCA
TTTGGGTTTCTGAAATATTTCATGGACTTACTCCCCTCCCCCTAAGAAATTATTCTTATGGAAA
ATTGCTTTTGTATGTAGAGCAGGACCTTTTGTACTCGGTGATGCTATGGGTATGTATAACATAA
CTTTCGCTGTTCCCTGTGAACGCTCCGGGCTTGTGCTGCGACTCACAATATTGTCAGTTCCGAA
ATGTATGGACATTTGACAGACTATTCCACTCTCTTTTGTAAAATGTAACTTTGAACTCTTTATT
ATTTTGTTTTGTTTTATTGCTTTTTGGAAATGTTTACCCCCACCCAACCCCCAGGCTCTTCTAG
CTTCTCTGTATAAAGAACCAGTTACCCTCGAGACTGTACTCTGGCCTCATTTTCTATTTTACAA
TTAAATAACTTTCCACATA

hide sequence

RefSeq Acc Id:

XM_008762190 ⟹ XP_008760412

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	134,333,339 - 134,377,034 (-)	NCBI
mRatBN7.2	3	113,879,972 - 113,924,081 (-)	NCBI
Rnor_6.0	3	119,091,739 - 119,122,424 (-)	NCBI

Sequence:

show sequence

TCAAGGCAGGCTGTATAGCCCAGGCTGGTCTTAAACTTAGGATACTTTTATCTACTTCAGCCTC
AAAGTCTCTGAGATTACATCTGTGTGTCAGCCTATCCGATTATATTTTGTTCTTTGATGTTCAA
ACTATGCCTATTGGCTAAGCATCACATAAATTTTGTTATATAGCATAAGACTAATTAAATGGTT
GCCTCCAGTAGTATTAGGTTCTCTAATTGAACTACTTTTCTTTCTTTAGATTATTCTCATTATA
ACTTACCTATCTTTCCCCCTTTGAGTAGGTTAATAGAAGGGTAATAATTTAATTAATGGATTTT
TTTACATTCTTAGAACTTTTAATAAGTTTGCTAAATTAAGTTAACACTGGTTAACTTTTACCAT
TGTTGGCATACATAATAGAGCAGTGTATAAAAGTGTGAGTTTCAATCACCCTCCAATACAGTAG
AAATTACTTTAAAATCATTTGACATCTGCTGGTGATAGTCAGCTGTTCTTTCATTTTGAAGACT
ACATGGTCACCATGTTCTTTTACCACTACTATAGATTCTTGTTTATGTTTTCTCCCCATATTTA
TTTTGAGTTAGACCTCTTTCTTTTAATCAGTAGCTAAAATAGAAGGTATCTGTTGTATAGTGTG
GGTAGTAATTGTCTATAACTAGAGATTTATTATATTCTAATACAGGTCATTTATAAATGAAATT
TATCTTATTAAAATGCTTTTCTGCCTCTGTATAATTTGCAACACTAATCTGAAGTGGAATATGT
GTAGGAGTCTGTGAAGAGGGCAGATTTCAGATATGCTAAATGCTTTACAAGTCACTTTCAACAA
CGTGTACCTGTGCATAGAAGATAGCACGACATCAAAGAAAATGGGGTAGAGAGTCAAGAAATCA
GGACTTGAAGCTGAGTCCCTGATAATTTTGTATTTAGCCAAGGGCCTACTGTCCAGAATGTACA
TGAATCAAAATGGAAAAAGAGACTAATTTCAGAAGGAGAAAACCTAGTCTGGCGCTCTGTAATG
GCTCTCCAGATTCTGTCTGGCACTGTACATGCCAAATGGGTTTGCCTGGCTAAAACACTGCAAG
ATGCTTGCTTTGTATACAGCGGTTACAGGTTCTTACCTAAGGGTGTCTTACTTTGGAGACACGT
AAGTGACGTCTGGCTCGCCTACTCTACAGACACAAGTTCAGGAACGGGGATTTTGCTCTGCTTT
TAGGAGAGGGGTCAGCTTTTCTTCTACAGATTATGTAGTCTTTAATCGAAAATGACTGTTTAAG
GTTCTTTTGCCTTTTGGTGTGATGGTTACTGATAAGGCCTTGCATCATCTCTAGGAAAGACATT
TATCAGAGGTCAGAAGTTTAGTGTTTGCAGAGATTAAAGACCTTGAGTTACACAGGAAATGGGA
GAGAGGGAAAGGTGAAAATCTCCCAGAAGGACAAAGGTAAAAGAAATATCATGAGTGTCACATT
CAGACAGACAAAGCACACAAACGAAAACCCGAGCACAGGCTCCAGTACCGACTCTTACTGTCAC
ACACAGAATAGCACTTACAAAGTCTCATCTGTGTGTGTGCACCACTGAGTGTTCATGGCTTTCT
GTGGTTCTTCCTGGGCTTGGTGTGTGGGCATTTTCTCTTGTAGTTTTGTACCTACTAACATTTC
TTCCAAGTTTGTAGAATATTTTATTCCTTCCTGGAAGAAATAACTCTTCCAAGCCCTGTCAGTT
TCTCATTGGCTTTTCTTGAGTGACAGCTCTTTCACCTGAGTTTGGCTACTCTCGTCCACCAGTT
ACTCCTCCTTCATGACTTTAACCTTGTGAGCGCATTCCTTTTTAGACAAATTTGAATCCTAGCT
GTATCTTTTTCTTACTAAATCTCAAAAAGATTCCATGTTTTCACTCCCCTACAGGCCTGCAGTC
CTCCTTTTATACAGTACCACAGATTGAGCTTCAAGCTCGAAGGCTTTCTGGATTTGGAAACTTT
ATTATTCCATAGCACAACTGTGTCTGAAATCTGAGCACTGCTGAGCACCTCAGGTCTTTGCTCA
CCTGTAGAGTCCTGCCATGGTCTCTCCTGACACATGCATGATTGTCCTCGCTGCCTCCTTCCTC
CCACCCTTGGCTGGGACATTAGTCTTTACAGAACTCTTAGATTCGAGATTAAACCTCTTATAGA
TTCTTTATGATACACATGAACTATTCATAAGACCATTCGACGCCCTTTTAGAGCTTGCATGGAG
TGTGCATTGTGCTTTCTGGAAGATTTGAAGGGTAGAAGAAATTTGTTTCAGAATTTGAGCACAC
TTGCTGTTTCAGAGAAGGGTATGGTAGAGCAGCTTATATCAGTGACAGGACAGTGTCTTATGCT
TTAATTCTACTTTGATAATGGTATTAGGCTCCAATAAGAACAGTTGCCAATGTTCATTCTTAGA
TTCATGGTACCTGCCTCCTTTCCTCGTCTGTCTTTGCTGGCCATATGTGAAGAGTTTAAACCAA
ATTTACCCAGGCAAAATTTTAGTGAGAAGAGAAATAAATACATTTCAGGAATCCAAATATAAAT
TGCTTTGTGTGATCAATAGTTTTAGATTAACAGTACCACTTTTGAAGGGATAACCGAGAATGGA
CGGACGAATGAGGGGAAGTCATGTCACTGTTTGTAATGGAAATTGTGATGTCAGTTCGTGTGTT
TCATTTAGATGTCCCTGGTAGATTTGGGGAAGAAGCTTTTGGAAGCGGCACGGGCAGGCCAAGA
TGACGAAGTCCGTATTTTGATGGCAAATGGAGCTCCTTTTACCACAGACTGGCTGGGAACTTCT
CCACTTCATCTGGCCGCACAGTATGGGCATTACTCTACCACAGAGGTGCTTCTCCGAGCCGGTG
TAAGTAGAGATGCCAGGACCAAAGTGGACCGGACACCACTGCACATGGCAGCTTCTGAGGGCCA
TGCCAGTATAGTAGAGGTTTTGCTTAAGCATGGTGCTGACGTCAATGCAAAGGATATGTTAAAG
ATGACAGCTCTGCATTGGGCGACAGAACATAATCATCAAGAGGTGGTGGAGCTTTTAATCAAAT
ATGGTGCTGATGTACACACGCAGAGTAAATTTTGTAAAACTGCATTTGATATTTCAATAGACAA
TGGAAATGAAGATTTAGCAGAGATATTACAGATTGCTATGCAGAACCAAATCAACACCAACCCG
GAGAGCCCTGACACTGTGACAATACATGCTGCCACGCCGCAGTTCATCATTGGACCCGGAGGGG
TGGTGAACCTTACAGATGAAACAGGAGTATCTGCTGTTCAGTTTGGAAACTCCTCTACGTCAGT
ATTAGCTACATTAGCTGCCTTAGCGGAAGCATCTGCCCCATTGTCCAATTCTTCAGAGACTCCA
GTAGTGGCCACAGAGGAAGTGGTTACCGCAGAATCTGTGGATGGTGCAATTCAGCAAGTAGTTA
GCTCAGGGGGTCAGCAAGTCATCACGATAGTCACAGATGGAATCCAGCTGGGAAACCTGCACTC
CATTCCAACCAGTGGGATGGGTCAGCCCATCATTGTGACCATGCCCGATGGACAGCAAGTATTG
ACAGTGCCAGCCACAGACATTGCTGAAGAAACTGTCATCAGTGAAGAGCCACCAGCTAAGAGAC
AGTGTATGGAAATAATTGAGAACCGGGTGGAATCTGCAGAGATTGAAGTAAGGAGCCTTTTACC
CGGAGAGAGAAGCGCTTCAGAAACAGCTGGATGAAGCCAACCGAGAGGCCCAGAAGTACCGACA
GCAGCTGCTTAAGAAGGAGCAGGAGGCAGAGGCCTACAGGCAGAAGCTGGAGGCCATGACACGC
CTCCAGACCAACAAAGAAGCCGTTTAGTCTCCGTGAACACCTGTTTGCTTTTACCTTTTGTCCA
GAAAGAATGCAGTCTTGAACTGTACACAGTAAGGACACAGCCTTGGGAGTACGAAATGATAAAG
AGTACTACCGATTGATAATGGGACTTAAGCCATGAGCTCTCAGTTCTTGTAATATAAAACTTCA
GAACTTGTGAAATGTATTTAAAACTGAATTCTGTAAATAGTTTTTTTGGTTGTTTCTTTTTTTA
CAGTTATAAATGAGTTGATAAAGATTGTTGCAGAGATCCAAAAACCACAGTATGCCACTGTTAT
GGGGAATTCTTTTTGATTTGGGTACAGACTCAACTTCTCAGAAACAGAAGTTTTAAGCGTGATC
GTTGTCGATTAGACCAAATGTGTGACAATTATGGTGACTGATGCTGGAAAGACTCTGCAGAGAG
ATTTCTCCCAGGAACTTTGTACAGCTTTTAGGTTGTCTCAGGTTCTCTGAAGACATTTTTTAGG
GAGCAGAAATTTTATATTTGTTCAATTTCAGCTACACGCAAGTATACAAGATTTACATGTATAT
GAAGCCAATATTTTTAAAATTTTGTTTGTACATAGTCTGCATGTTTTATGATATTAAAACACAT
CACTTGCTTAGGTATGTTTCCCACAAAGACGATGAAAGTTACCAAGAAAAACAAAGGCACCGCT
GTCATTTTGTCGGTCATTGAAAGTGAGTAAGCTCGCGACTGGTTTTACTGGCGACCATGACGAT
GTTCTTGGAGCAGCTTGCAAGAAAACTCAATCTGCACTTGTATTGCTTTTCTGGCAATTGCAGT
GTGAGGACGTGAGACTGCTCTGTGCCTTCCTTCCATCATGACTTCCACACAAGCACTTTGAGGC
GCTGGATCTTAAGATAATGTTTTTAGCAAACTCAGTGCATTTGGGTTTCTGAAATATTTCATGG
ACTTACTCCCCTCCCCCTAAGAAATTATTCTTATGGAAAATTGCTTTTGTATGTAGAGCAGGAC
CTTTTGTACTCGGTGATGCTATGGGTATGTATAACATAACTTTCGCTGTTCCCTGTGAACGCTC
CGGGCTTGTGCTGCGACTCACAATATTGTCAGTTCCGAAATGTATGGACATTTGACAGACTATT
CCACTCTCTTTTGTAAAATGTAACTTTGAACTCTTTATTATTTTGTTTTGTTTTATTGCTTTTT
GGAAATGTTTACCCCCACCCAACCCCCAGGCTCTTCTAGCTTCTCTGTATAAAGAACCAGTTAC
CCTCGAGACTGTACTCTGGCCTCATTTTCTATTTTACAATTAAATAACTTTCCACATA

hide sequence

RefSeq Acc Id:

XM_017591982 ⟹ XP_017447471

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	134,333,339 - 134,377,032 (-)	NCBI
mRatBN7.2	3	113,879,972 - 113,924,080 (-)	NCBI
Rnor_6.0	3	119,091,739 - 119,124,315 (-)	NCBI

Sequence:

show sequence

TTTTGTTTTTTGGTTTTTTTTTTCCTCCCCAACCCCGGAAGTGTTTTTAATTGCATGAGTAATA
TGTGTTCCTTGCACAAAACTTACATAATAATGGGGCATTTTTTATTTTTAATTATCATGCTTTA
TTGTTTTGAGTTTTTTTTCTGTGCATTTTTTTACATAGTTCAGTTTATGTTGTATATACAATTT
GGGGTCTTGATTCTTGACACATTACATGCTATTGTAAATGTTTTTAAGTAAAAGTATTAAAGAT
GCCATTAAAGCATGTATGCTTGTGTAAGCTGCTCTTGTAACCACTAGATGGCACTCAGCACCTA
TAATTCTTGTGAGCTGAAGTAGCTCTTGAGAAATTTAAGTTTCTAGAAGGATCTTATGTTTTAA
TTTAAGTAAAGCAATGGTTTATATTAGACTGTGATAAGCATTTCATAAATAGTAAATAAATTCA
AGGTGGAACCTATCGCAGTGGATATTTTTGTATCTTGAGGAGAAAGGAGTATTAAACTAAGTGG
TGTGACACGTCACTTGCAGTAGATTCTGGGTATATTGGCCGCCAGTAAAATTTACTTATTTTCT
TCTATTGGAGAAAATCAAATGATGAGCTATATATTTTAATTGCTAACCCTTATTTTTTAATACT
AATTTTTCCTGAGGCTTTAACATGTAGTAAACAGTCTGAATGAACTGAAGACTTGACCCATTAG
GTATGTGTGTATATGGCACATACATGGGTTCACATACATGTGTGCATATGAAATGAAATGTCTT
TAGTTGCTCGCCATTTTATTTATTGGAGGCATGGTCTCTCATTGAACTCAGAGCACTATGAATT
TGGCTAGCCTTGTCTCCATCTTCTAGGTGCTAGGCTATCCCAACCATCTGGTGTTCTGTGGGTT
CTGGGAATCTGAACTGTGGTCCTTACGTTTCACAGCAGCCCCATTACCTGCTGAACCAGCCCCC
AGCCTCCTGGTCATTTTCATTGTCTGGATGCAACTAAATTTGTCCCAGTCAGAATTACTTCATT
GTGTTTTCAGATGTCCCTGGTAGATTTGGGGAAGAAGCTTTTGGAAGCGGCACGGGCAGGCCAA
GATGACGAAGTCCGTATTTTGATGGCAAATGGAGCTCCTTTTACCACAGACTGGCTGGGAACTT
CTCCACTTCATCTGGCCGCACAGTATGGGCATTACTCTACCACAGAGGTGCTTCTCCGAGCCGG
TGTAAGTAGAGATGCCAGGACCAAAGTGGACCGGACACCACTGCACATGGCAGCTTCTGAGGGC
CATGCCAGTATAGTAGAGGTTTTGCTTAAGCATGGTGCTGACGTCAATGCAAAGGATATGTTAA
AGATGACAGCTCTGCATTGGGCGACAGAACATAATCATCAAGAGGTGGTGGAGCTTTTAATCAA
ATATGGTGCTGATGTACACACGCAGAGTAAATTTTGTAAAACTGCATTTGATATTTCAATAGAC
AATGGAAATGAAGATTTAGCAGAGATATTACAGATTGCTATGCAGAACCAAATCAACACCAACC
CGGAGAGCCCTGACACTGTGACAATACATGCTGCCACGCCGCAGTTCATCATTGGACCCGGAGG
GGTGGTGAACCTTACAGATGAAACAGGAGTATCTGCTGTTCAGTTTGGAAACTCCTCTACGTCA
GTATTAGCTACATTAGCTGCCTTAGCGGAAGCATCTGCCCCATTGTCCAATTCTTCAGAGACTC
CAGTAGTGGCCACAGAGGAAGTGGTTACCGCAGAATCTGTGGATGGTGCAATTCAGCAAGTAGT
TAGCTCAGGGGGTCAGCAAGTCATCACGATAGTCACAGATGGAATCCAGCTGGGAAACCTGCAC
TCCATTCCAACCAGTGGGATGGGTCAGCCCATCATTGTGACCATGCCCGATGGACAGCAAGTAT
TGACAGTGCCAGCCACAGACATTGCTGAAGAAACTGTCATCAGTGAAGAGCCACCAGCTAAGAG
ACAGTGTATGGAAATAATTGAGAACCGGGTGGAATCTGCAGAGATTGAAGAGAGAGAAGCGCTT
CAGAAACAGCTGGATGAAGCCAACCGAGAGGCCCAGAAGTACCGACAGCAGCTGCTTAAGAAGG
AGCAGGAGGCAGAGGCCTACAGGCAGAAGCTGGAGGCCATGACACGCCTCCAGACCAACAAAGA
AGCCGTTTAGTCTCCGTGAACACCTGTTTGCTTTTACCTTTTGTCCAGAAAGAATGCAGTCTTG
AACTGTACACAGTAAGGACACAGCCTTGGGAGTACGAAATGATAAAGAGTACTACCGATTGATA
ATGGGACTTAAGCCATGAGCTCTCAGTTCTTGTAATATAAAACTTCAGAACTTGTGAAATGTAT
TTAAAACTGAATTCTGTAAATAGTTTTTTTGGTTGTTTCTTTTTTTACAGTTATAAATGAGTTG
ATAAAGATTGTTGCAGAGATCCAAAAACCACAGTATGCCACTGTTATGGGGAATTCTTTTTGAT
TTGGGTACAGACTCAACTTCTCAGAAACAGAAGTTTTAAGCGTGATCGTTGTCGATTAGACCAA
ATGTGTGACAATTATGGTGACTGATGCTGGAAAGACTCTGCAGAGAGATTTCTCCCAGGAACTT
TGTACAGCTTTTAGGTTGTCTCAGGTTCTCTGAAGACATTTTTTAGGGAGCAGAAATTTTATAT
TTGTTCAATTTCAGCTACACGCAAGTATACAAGATTTACATGTATATGAAGCCAATATTTTTAA
AATTTTGTTTGTACATAGTCTGCATGTTTTATGATATTAAAACACATCACTTGCTTAGGTATGT
TTCCCACAAAGACGATGAAAGTTACCAAGAAAAACAAAGGCACCGCTGTCATTTTGTCGGTCAT
TGAAAGTGAGTAAGCTCGCGACTGGTTTTACTGGCGACCATGACGATGTTCTTGGAGCAGCTTG
CAAGAAAACTCAATCTGCACTTGTATTGCTTTTCTGGCAATTGCAGTGTGAGGACGTGAGACTG
CTCTGTGCCTTCCTTCCATCATGACTTCCACACAAGCACTTTGAGGCGCTGGATCTTAAGATAA
TGTTTTTAGCAAACTCAGTGCATTTGGGTTTCTGAAATATTTCATGGACTTACTCCCCTCCCCC
TAAGAAATTATTCTTATGGAAAATTGCTTTTGTATGTAGAGCAGGACCTTTTGTACTCGGTGAT
GCTATGGGTATGTATAACATAACTTTCGCTGTTCCCTGTGAACGCTCCGGGCTTGTGCTGCGAC
TCACAATATTGTCAGTTCCGAAATGTATGGACATTTGACAGACTATTCCACTCTCTTTTGTAAA
ATGTAACTTTGAACTCTTTATTATTTTGTTTTGTTTTATTGCTTTTTGGAAATGTTTACCCCCA
CCCAACCCCCAGGCTCTTCTAGCTTCTCTGTATAAAGAACCAGTTACCCTCGAGACTGTACTCT
GGCCTCATTTTCTATTTTACAATTAAATAACTTTCCACATA

hide sequence

RefSeq Acc Id:

XM_017591983 ⟹ XP_017447472

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	134,333,339 - 134,377,034 (-)	NCBI
mRatBN7.2	3	113,879,972 - 113,924,081 (-)	NCBI
Rnor_6.0	3	119,092,736 - 119,122,423 (-)	NCBI

Sequence:

show sequence

CAAGGCAGGCTGTATAGCCCAGGCTGGTCTTAAACTTAGGATACTTTTATCTACTTCAGCCTCA
AAGTCTCTGAGATTACATCTGTGTGTCAGCCTATCCGATTATATTTTGTTCTTTGATGTTCAAA
CTATGCCTATTGGCTAAGCATCACATAAATTTTGTTATATAGCATAAGACTAATTAAATGGTTG
CCTCCAGTAGTATTAGGTTCTCTAATTGAACTACTTTTCTTTCTTTAGATTATTCTCATTATAA
CTTACCTATCTTTCCCCCTTTGAGTAGGTTAATAGAAGGGTAATAATTTAATTAATGGATTTTT
TTACATTCTTAGAACTTTTAATAAGTTTGCTAAATTAAGTTAACACTGGTTAACTTTTACCATT
GTTGGCATACATAATAGAGCAGTGTATAAAAGTGTGAGTTTCAATCACCCTCCAATACAGTAGA
AATTACTTTAAAATCATTTGACATCTGCTGGTGATAGTCAGCTGTTCTTTCATTTTGAAGACTA
CATGGTCACCATGTTCTTTTACCACTACTATAGATTCTTGTTTATGTTTTCTCCCCATATTTAT
TTTGAGTTAGACCTCTTTCTTTTAATCAGTAGCTAAAATAGAAGGTATCTGTTGTATAGTGTGG
GTAGTAATTGTCTATAACTAGAGATTTATTATATTCTAATACAGGTCATTTATAAATGAAATTT
ATCTTATTAAAATGCTTTTCTGCCTCTGTATAATTTGCAACACTAATCTGAAGTGGAATATGTG
TAGGAGTCTGTGAAGAGGGCAGATTTCAGATATGCTAAATGCTTTACAAGTCACTTTCAACAAC
GTGTACCTGTGCATAGAAGATAGCACGACATCAAAGAAAATGGGGTAGAGAGTCAAGAAATCAG
GACTTGAAGCTGAGTCCCTGATAATTTTGTATTTAGCCAAGGGCCTACTGTCCAGAATGTACAT
GAATCAAAATGGAAAAAGAGACTAATTTCAGAAGGAGAAAACCTAGTCTGGCGCTCTGTAATGG
CTCTCCAGATTCTGTCTGGCACTGTACATGCCAAATGGGTTTGCCTGGCTAAAACACTGCAAGA
TGCTTGCTTTGTATACAGCGGTTACAGGTTCTTACCTAAGGGTGTCTTACTTTGGAGACACGTA
AGTGACGTCTGGCTCGCCTACTCTACAGACACAAGTTCAGGAACGGGGATTTTGCTCTGCTTTT
AGGAGAGGGGTCAGCTTTTCTTCTACAGATTATGTAGTCTTTAATCGAAAATGACTGTTTAAGG
TTCTTTTGCCTTTTGGTGTGATGGTTACTGATAAGGCCTTGCATCATCTCTAGGAAAGACATTT
ATCAGAGGTCAGAAGTTTAGTGTTTGCAGAGATTAAAGACCTTGAGTTACACAGGAAATGGGAG
AGAGGGAAAGGTGAAAATCTCCCAGAAGGACAAAGGTAAAAGAAATATCATGAGTGTCACATTC
AGACAGACAAAGCACACAAACGAAAACCCGAGCACAGGCTCCAGTACCGACTCTTACTGTCACA
CACAGAATAGCACTTACAAAGTCTCATCTGTGTGTGTGCACCACTGAGTGTTCATGGCTTTCTG
TGGTTCTTCCTGGGCTTGGTGTGTGGGCATTTTCTCTTGTAGTTTTGTACCTACTAACATTTCT
TCCAAGTTTGTAGAATATTTTATTCCTTCCTGGAAGAAATAACTCTTCCAAGCCCTGTCAGTTT
CTCATTGGCTTTTCTTGAGTGACAGCTCTTTCACCTGAGTTTGGCTACTCTCGTCCACCAGTTA
CTCCTCCTTCATGACTTTAACCTTGTGAGCGCATTCCTTTTTAGACAAATTTGAATCCTAGCTG
TATCTTTTTCTTACTAAATCTCAAAAAGATTCCATGTTTTCACTCCCCTACAGGCCTGCAGTCC
TCCTTTTATACAGTACCACAGATTGAGCTTCAAGCTCGAAGGCTTTCTGGATTTGGAAACTTTA
TTATTCCATAGCACAACTGTGTCTGAAATCTGAGCACTGCTGAGCACCTCAGGTCTTTGCTCAC
CTGTAGAGTCCTGCCATGGTCTCTCCTGACACATGCATGATTGTCCTCGCTGCCTCCTTCCTCC
CACCCTTGGCTGGGACATTAGTCTTTACAGAACTCTTAGATTCGAGATTAAACCTCTTATAGAT
TCTTTATGATACACATGAACTATTCATAAGACCATTCGACGCCCTTTTAGAGCTTGCATGGAGT
GTGCATTGTGCTTTCTGGAAGATTTGAAGGGTAGAAGAAATTTGTTTCAGAATTTGAGCACACT
TGCTGTTTCAGAGAAGGGTATGGTAGAGCAGCTTATATCAGTGACAGGACAGTGTCTTATGCTT
TAATTCTACTTTGATAATGGTATTAGGCTCCAATAAGAACAGTTGCCAATGTTCATTCTTAGAT
TCATGGTACCTGCCTCCTTTCCTCGTCTGTCTTTGCTGGCCATATGTGAAGAGTTTAAACCAAA
TTTACCCAGGCAAAATTTTAGTGAGAAGAGAAATAAATACATTTCAGGAATCCAAATATAAATT
GCTTTGTGTGATCAATAGTTTTAGATTAACAGTACCACTTTTGAAGGGATAACCGAGAATGGAC
GGACGAATGAGGGGAAGTCATGTCACTGTTTGTAATGGAAATTGTGATGTCAGTTCGTGTGTTT
CATTTAGATGTCCCTGGTAGATTTGGGGAAGAAGCTTTTGGAAGCGGCACGGGCAGGCCAAGAT
GACGAAGTCCGTATTTTGATGGCAAATGGAGCTCCTTTTACCACAGACTGGCTGGGAACTTCTC
CACTTCATCTGGCCGCACAGTATGGGCATTACTCTACCACAGAGGTGCTTCTCCGAGCCGGTGT
AAGTAGAGATGCCAGGACCAAAGTGGACCGGACACCACTGCACATGGCAGCTTCTGAGGGCCAT
GCCAGTATAGTAGAGGTTTTGCTTAAGCATGGTGCTGACGTCAATGCAAAGGATATGTTAAAGA
TGACAGCTCTGCATTGGGCGACAGAACATAATCATCAAGAGGTGGTGGAGCTTTTAATCAAATA
TGGTGCTGATGTACACACGCAGAGTAAATTTTGTAAAACTGCATTTGATATTTCAATAGACAAT
GGAAATGAAGATTTAGCAGAGATATTACAGATTGCTATGCAGAACCAAATCAACACCAACCCGG
AGAGCCCTGACACTGTGACAATACATGCTGCCACGCCGCAGTTCATCATTGGACCCGGAGGGGT
GGTGAACCTTACAGATGAAACAGGAGTATCTGCTGTTCAGTTTGGAAACTCCTCTACGTCAGTA
TTAGCTACATTAGCTGCCTTAGCGGAAGCATCTGCCCCATTGTCCAATTCTTCAGAGACTCCAG
TGGCCACAGAGGAAGTGGTTACCGCAGAATCTGTGGATGGTGCAATTCAGCAAGTAGTTAGCTC
AGGGGGTCAGCAAGTCATCACGATAGTCACAGATGGAATCCAGCTGGGAAACCTGCACTCCATT
CCAACCAGTGGGATGGGTCAGCCCATCATTGTGACCATGCCCGATGGACAGCAAGTATTGACAG
TGCCAGCCACAGACATTGCTGAAGAAACTGTCATCAGTGAAGAGCCACCAGCTAAGAGACAGTG
TATGGAAATAATTGAGAACCGGGTGGAATCTGCAGAGATTGAAGAGAGAGAAGCGCTTCAGAAA
CAGCTGGATGAAGCCAACCGAGAGGCCCAGAAGTACCGACAGCAGCTGCTTAAGAAGGAGCAGG
AGGCAGAGGCCTACAGGCAGAAGCTGGAGGCCATGACACGCCTCCAGACCAACAAAGAAGCCGT
TTAGTCTCCGTGAACACCTGTTTGCTTTTACCTTTTGTCCAGAAAGAATGCAGTCTTGAACTGT
ACACAGTAAGGACACAGCCTTGGGAGTACGAAATGATAAAGAGTACTACCGATTGATAATGGGA
CTTAAGCCATGAGCTCTCAGTTCTTGTAATATAAAACTTCAGAACTTGTGAAATGTATTTAAAA
CTGAATTCTGTAAATAGTTTTTTTGGTTGTTTCTTTTTTTACAGTTATAAATGAGTTGATAAAG
ATTGTTGCAGAGATCCAAAAACCACAGTATGCCACTGTTATGGGGAATTCTTTTTGATTTGG

hide sequence

RefSeq Acc Id:

XM_017591984 ⟹ XP_017447473

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	134,333,339 - 134,377,034 (-)	NCBI
mRatBN7.2	3	113,879,972 - 113,924,082 (-)	NCBI
Rnor_6.0	3	119,091,739 - 119,122,424 (-)	NCBI

Sequence:

show sequence

TCAAGGCAGGCTGTATAGCCCAGGCTGGTCTTAAACTTAGGATACTTTTATCTACTTCAGCCTC
AAAGTCTCTGAGATTACATCTGTGTGTCAGCCTATCCGATTATATTTTGTTCTTTGATGTTCAA
ACTATGCCTATTGGCTAAGCATCACATAAATTTTGTTATATAGCATAAGACTAATTAAATGGTT
GCCTCCAGTAGTATTAGGTTCTCTAATTGAACTACTTTTCTTTCTTTAGATTATTCTCATTATA
ACTTACCTATCTTTCCCCCTTTGAGTAGGTTAATAGAAGGGTAATAATTTAATTAATGGATTTT
TTTACATTCTTAGAACTTTTAATAAGTTTGCTAAATTAAGTTAACACTGGTTAACTTTTACCAT
TGTTGGCATACATAATAGAGCAGTGTATAAAAGTGTGAGTTTCAATCACCCTCCAATACAGTAG
AAATTACTTTAAAATCATTTGACATCTGCTGGTGATAGTCAGCTGTTCTTTCATTTTGAAGACT
ACATGGTCACCATGTTCTTTTACCACTACTATAGATTCTTGTTTATGTTTTCTCCCCATATTTA
TTTTGAGTTAGACCTCTTTCTTTTAATCAGTAGCTAAAATAGAAGGTATCTGTTGTATAGTGTG
GGTAGTAATTGTCTATAACTAGAGATTTATTATATTCTAATACAGGTCATTTATAAATGAAATT
TATCTTATTAAAATGCTTTTCTGCCTCTGTATAATTTGCAACACTAATCTGAAGTGGAATATGT
GTAGGAGTCTGTGAAGAGGGCAGATTTCAGATATGCTAAATGCTTTACAAGTCACTTTCAACAA
CGTGTACCTGTGCATAGAAGATAGCACGACATCAAAGAAAATGGGGTAGAGAGTCAAGAAATCA
GGACTTGAAGCTGAGTCCCTGATAATTTTGTATTTAGCCAAGGGCCTACTGTCCAGAATGTACA
TGAATCAAAATGGAAAAAGAGACTAATTTCAGAAGGAGAAAACCTAGTCTGGCGCTCTGTAATG
GCTCTCCAGATTCTGTCTGGCACTGTACATGCCAAATGGGTTTGCCTGGCTAAAACACTGCAAG
ATGCTTGCTTTGTATACAGCGGTTACAGGTTCTTACCTAAGGGTGTCTTACTTTGGAGACACGT
AAGTGACGTCTGGCTCGCCTACTCTACAGACACAAGTTCAGGAACGGGGATTTTGCTCTGCTTT
TAGGAGAGGGGTCAGCTTTTCTTCTACAGATTATGTAGTCTTTAATCGAAAATGACTGTTTAAG
GTTCTTTTGCCTTTTGGTGTGATGGTTACTGATAAGGCCTTGCATCATCTCTAGGAAAGACATT
TATCAGAGGTCAGAAGTTTAGTGTTTGCAGAGATTAAAGACCTTGAGTTACACAGGAAATGGGA
GAGAGGGAAAGGTGAAAATCTCCCAGAAGGACAAAGGTAAAAGAAATATCATGAGTGTCACATT
CAGACAGACAAAGCACACAAACGAAAACCCGAGCACAGGCTCCAGTACCGACTCTTACTGTCAC
ACACAGAATAGCACTTACAAAGTCTCATCTGTGTGTGTGCACCACTGAGTGTTCATGGCTTTCT
GTGGTTCTTCCTGGGCTTGGTGTGTGGGCATTTTCTCTTGTAGTTTTGTACCTACTAACATTTC
TTCCAAGTTTGTAGAATATTTTATTCCTTCCTGGAAGAAATAACTCTTCCAAGCCCTGTCAGTT
TCTCATTGGCTTTTCTTGAGTGACAGCTCTTTCACCTGAGTTTGGCTACTCTCGTCCACCAGTT
ACTCCTCCTTCATGACTTTAACCTTGTGAGCGCATTCCTTTTTAGACAAATTTGAATCCTAGCT
GTATCTTTTTCTTACTAAATCTCAAAAAGATTCCATGTTTTCACTCCCCTACAGGCCTGCAGTC
CTCCTTTTATACAGTACCACAGATTGAGCTTCAAGCTCGAAGGCTTTCTGGATTTGGAAACTTT
ATTATTCCATAGCACAACTGTGTCTGAAATCTGAGCACTGCTGAGCACCTCAGGTCTTTGCTCA
CCTGTAGAGTCCTGCCATGGTCTCTCCTGACACATGCATGATTGTCCTCGCTGCCTCCTTCCTC
CCACCCTTGGCTGGGACATTAGTCTTTACAGAACTCTTAGATTCGAGATTAAACCTCTTATAGA
TTCTTTATGATACACATGAACTATTCATAAGACCATTCGACGCCCTTTTAGAGCTTGCATGGAG
TGTGCATTGTGCTTTCTGGAAGATTTGAAGGGTAGAAGAAATTTGTTTCAGAATTTGAGCACAC
TTGCTGTTTCAGAGAAGGGTATGGTAGAGCAGCTTATATCAGTGACAGGACAGTGTCTTATGCT
TTAATTCTACTTTGATAATGGTATTAGGCTCCAATAAGAACAGTTGCCAATGTTCATTCTTAGA
TTCATGGTACCTGCCTCCTTTCCTCGTCTGTCTTTGCTGGCCATATGTGAAGAGTTTAAACCAA
ATTTACCCAGGCAAAATTTTAGTGAGAAGAGAAATAAATACATTTCAGGAATCCAAATATAAAT
TGCTTTGTGTGATCAATAGTTTTAGATTAACAGTACCACTTTTGAAGGGATAACCGAGAATGGA
CGGACGAATGAGGGGAAGTCATGTCACTGTTTGTAATGGAAATTGTGATGTCAGTTCGTGTGTT
TCATTTAGATGTCCCTGGTAGATTTGGGGAAGAAGCTTTTGGAAGCGGCACGGGCAGGCCAAGA
TGACGAAGTCCGTATTTTGATGGCAAATGGAGCTCCTTTTACCACAGACTGGCTGGGAACTTCT
CCACTTCATCTGGCCGCACAGTATGGGCATTACTCTACCACAGAGGTGCTTCTCCGAGCCGGTG
TAAGTAGAGATGCCAGGACCAAAGTGGACCGGACACCACTGCACATGGCAGCTTCTGAGGGCCA
TGCCAGTATAGTAGAGGTTTTGCTTAAGATTGCTATGCAGAACCAAATCAACACCAACCCGGAG
AGCCCTGACACTGTGACAATACATGCTGCCACGCCGCAGTTCATCATTGGACCCGGAGGGGTGG
TGAACCTTACAGATGAAACAGGAGTATCTGCTGTTCAGTTTGGAAACTCCTCTACGTCAGTATT
AGCTACATTAGCTGCCTTAGCGGAAGCATCTGCCCCATTGTCCAATTCTTCAGAGACTCCAGTA
GTGGCCACAGAGGAAGTGGTTACCGCAGAATCTGTGGATGGTGCAATTCAGCAAGTAGTTAGCT
CAGGGGGTCAGCAAGTCATCACGATAGTCACAGATGGAATCCAGCTGGGAAACCTGCACTCCAT
TCCAACCAGTGGGATGGGTCAGCCCATCATTGTGACCATGCCCGATGGACAGCAAGTATTGACA
GTGCCAGCCACAGACATTGCTGAAGAAACTGTCATCAGTGAAGAGCCACCAGCTAAGAGACAGT
GTATGGAAATAATTGAGAACCGGGTGGAATCTGCAGAGATTGAAGAGAGAGAAGCGCTTCAGAA
ACAGCTGGATGAAGCCAACCGAGAGGCCCAGAAGTACCGACAGCAGCTGCTTAAGAAGGAGCAG
GAGGCAGAGGCCTACAGGCAGAAGCTGGAGGCCATGACACGCCTCCAGACCAACAAAGAAGCCG
TTTAGTCTCCGTGAACACCTGTTTGCTTTTACCTTTTGTCCAGAAAGAATGCAGTCTTGAACTG
TACACAGTAAGGACACAGCCTTGGGAGTACGAAATGATAAAGAGTACTACCGATTGATAATGGG
ACTTAAGCCATGAGCTCTCAGTTCTTGTAATATAAAACTTCAGAACTTGTGAAATGTATTTAAA
ACTGAATTCTGTAAATAGTTTTTTTGGTTGTTTCTTTTTTTACAGTTATAAATGAGTTGATAAA
GATTGTTGCAGAGATCCAAAAACCACAGTATGCCACTGTTATGGGGAATTCTTTTTGATTTGGG
TACAGACTCAACTTCTCAGAAACAGAAGTTTTAAGCGTGATCGTTGTCGATTAGACCAAATGTG
TGACAATTATGGTGACTGATGCTGGAAAGACTCTGCAGAGAGATTTCTCCCAGGAACTTTGTAC
AGCTTTTAGGTTGTCTCAGGTTCTCTGAAGACATTTTTTAGGGAGCAGAAATTTTATATTTGTT
CAATTTCAGCTACACGCAAGTATACAAGATTTACATGTATATGAAGCCAATATTTTTAAAATTT
TGTTTGTACATAGTCTGCATGTTTTATGATATTAAAACACATCACTTGCTTAGGTATGTTTCCC
ACAAAGACGATGAAAGTTACCAAGAAAAACAAAGGCACCGCTGTCATTTTGTCGGTCATTGAAA
GTGAGTAAGCTCGCGACTGGTTTTACTGGCGACCATGACGATGTTCTTGGAGCAGCTTGCAAGA
AAACTCAATCTGCACTTGTATTGCTTTTCTGGCAATTGCAGTGTGAGGACGTGAGACTGCTCTG
TGCCTTCCTTCCATCATGACTTCCACACAAGCACTTTGAGGCGCTGGATCTTAAGATAATGTTT
TTAGCAAACTCAGTGCATTTGGGTTTCTGAAATATTTCATGGACTTACTCCCCTCCCCCTAAGA
AATTATTCTTATGGAAAATTGCTTTTGTATGTAGAGCAGGACCTTTTGTACTCGGTGATGCTAT
GGGTATGTATAACATAACTTTCGCTGTTCCCTGTGAACGCTCCGGGCTTGTGCTGCGACTCACA
ATATTGTCAGTTCCGAAATGTATGGACATTTGACAGACTATTCCACTCTCTTTTGTAAAATGTA
ACTTTGAACTCTTTATTATTTTGTTTTGTTTTATTGCTTTTTGGAAATGTTTACCCCCACCCAA
CCCCCAGGCTCTTCTAGCTTCTCTGTATAAAGAACCAGTTACCCTCGAGACTGTACTCTGGCCT
CATTTTCTATTTTACAATTAAATAACTTTCCACATA

hide sequence

RefSeq Acc Id:

XM_039105689 ⟹ XP_038961617

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	134,333,339 - 134,380,239 (-)	NCBI
mRatBN7.2	3	113,879,972 - 113,924,742 (-)	NCBI

RefSeq Acc Id:

XM_063284371 ⟹ XP_063140441

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	134,333,339 - 134,376,070 (-)	NCBI

RefSeq Acc Id:

XM_063284372 ⟹ XP_063140442

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	134,333,339 - 134,377,032 (-)	NCBI

RefSeq Acc Id:

XM_063284373 ⟹ XP_063140443

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	134,333,339 - 134,377,032 (-)	NCBI

RefSeq Acc Id:

XM_063284374 ⟹ XP_063140444

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	134,333,339 - 134,377,034 (-)	NCBI

RefSeq Acc Id:

XM_063284375 ⟹ XP_063140445

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	134,333,339 - 134,377,034 (-)	NCBI

RefSeq Acc Id:

XM_063284376 ⟹ XP_063140446

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	134,333,339 - 134,377,034 (-)	NCBI

RefSeq Acc Id:

XM_063284377 ⟹ XP_063140447

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	134,333,339 - 134,377,034 (-)	NCBI

RefSeq Acc Id:

XM_063284378 ⟹ XP_063140448

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	134,333,339 - 134,377,027 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_001034125	(Get FASTA)	NCBI Sequence Viewer
	NP_001385852	(Get FASTA)	NCBI Sequence Viewer
	NP_001385853	(Get FASTA)	NCBI Sequence Viewer
	XP_008760411	(Get FASTA)	NCBI Sequence Viewer
	XP_008760412	(Get FASTA)	NCBI Sequence Viewer
	XP_017447471	(Get FASTA)	NCBI Sequence Viewer
	XP_017447472	(Get FASTA)	NCBI Sequence Viewer
	XP_017447473	(Get FASTA)	NCBI Sequence Viewer
	XP_038961617	(Get FASTA)	NCBI Sequence Viewer
	XP_063140441	(Get FASTA)	NCBI Sequence Viewer
	XP_063140442	(Get FASTA)	NCBI Sequence Viewer
	XP_063140443	(Get FASTA)	NCBI Sequence Viewer
	XP_063140444	(Get FASTA)	NCBI Sequence Viewer
	XP_063140445	(Get FASTA)	NCBI Sequence Viewer
	XP_063140446	(Get FASTA)	NCBI Sequence Viewer
	XP_063140447	(Get FASTA)	NCBI Sequence Viewer
	XP_063140448	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH98859	(Get FASTA)	NCBI Sequence Viewer
	EDL80089	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000045035
	ENSRNOP00000045035.5
	ENSRNOP00000073366.1
	ENSRNOP00000078447
	ENSRNOP00000078447.1

RefSeq Acc Id:	NP_001034125 ⟸ NM_001039036
- Peptide Label:	isoform 1
- UniProtKB:	Q4KM28 (UniProtKB/TrEMBL), A0A0G2K5B7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSLVDLGKKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHYSTTEVLLRAGVSR DARTKVDRTPLHMAASEGHASIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGA DVHTQSKFCKTAFDISIDNGNEDLAEILQIAMQNQINTNPESPDTVTIHAATPQFIIGPGGVVN LTDETGVSAVQFGNSSTSVLATLAALAEASAPLSNSSETPVVATEEVVTAESVDGAIQQVVSSG GQQVITIVTDGIQLGNLHSIPTSGMGQPIIVTMPDGQQGERSASETAG hide sequence

RefSeq Acc Id:	XP_008760411 ⟸ XM_008762189
- Peptide Label:	isoform X1
- UniProtKB:	A6HPY8 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSLVDLGKKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHYSTTEVLLRAGVSR DARTKVDRTPLHMAASEGHASIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGA DVHTQSKFCKTAFDISIDNGNEDLAEILQIAMQNQINTNPESPDTVTIHAATPQFIIGPGGVVN LTDETGVSAVQFGNSSTSVLATLAALAEASAPLSNSSETPVVATEEVVTAESVDGAIQQVVSSG GQQVITIVTDGIQLGNLHSIPTSGMGQPIIVTMPDGQQVLTVPATDIAEETVISEEPPAKRQCM EIIENRVESAEIEEREALQKQLDEANREAQKYRQQLLKKEQEAEAYRQKLEAMTRLQTNKEAV hide sequence

RefSeq Acc Id:	XP_008760412 ⟸ XM_008762190
- Peptide Label:	isoform X3
- UniProtKB:	A0A8I5ZWD2 (UniProtKB/TrEMBL), A0A0G2K5B7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSLVDLGKKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHYSTTEVLLRAGVSR DARTKVDRTPLHMAASEGHASIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGA DVHTQSKFCKTAFDISIDNGNEDLAEILQIAMQNQINTNPESPDTVTIHAATPQFIIGPGGVVN LTDETGVSAVQFGNSSTSVLATLAALAEASAPLSNSSETPVVATEEVVTAESVDGAIQQVVSSG GQQVITIVTDGIQLGNLHSIPTSGMGQPIIVTMPDGQQVLTVPATDIAEETVISEEPPAKRQCM EIIENRVESAEIEVRSLLPGERSASETAG hide sequence

RefSeq Acc Id:	XP_017447471 ⟸ XM_017591982
- Peptide Label:	isoform X1
- UniProtKB:	A6HPY8 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSLVDLGKKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHYSTTEVLLRAGVSR DARTKVDRTPLHMAASEGHASIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGA DVHTQSKFCKTAFDISIDNGNEDLAEILQIAMQNQINTNPESPDTVTIHAATPQFIIGPGGVVN LTDETGVSAVQFGNSSTSVLATLAALAEASAPLSNSSETPVVATEEVVTAESVDGAIQQVVSSG GQQVITIVTDGIQLGNLHSIPTSGMGQPIIVTMPDGQQVLTVPATDIAEETVISEEPPAKRQCM EIIENRVESAEIEEREALQKQLDEANREAQKYRQQLLKKEQEAEAYRQKLEAMTRLQTNKEAV hide sequence

RefSeq Acc Id:

XP_017447473 ⟸ XM_017591984

- Peptide Label:

isoform X5

- Sequence:

show sequence

MSLVDLGKKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHYSTTEVLLRAGVSR
DARTKVDRTPLHMAASEGHASIVEVLLKIAMQNQINTNPESPDTVTIHAATPQFIIGPGGVVNL
TDETGVSAVQFGNSSTSVLATLAALAEASAPLSNSSETPVVATEEVVTAESVDGAIQQVVSSGG
QQVITIVTDGIQLGNLHSIPTSGMGQPIIVTMPDGQQVLTVPATDIAEETVISEEPPAKRQCME
IIENRVESAEIEEREALQKQLDEANREAQKYRQQLLKKEQEAEAYRQKLEAMTRLQTNKEAV

hide sequence

RefSeq Acc Id:

XP_017447472 ⟸ XM_017591983

- Peptide Label:

isoform X2

- Sequence:

show sequence

MSLVDLGKKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHYSTTEVLLRAGVSR
DARTKVDRTPLHMAASEGHASIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGA
DVHTQSKFCKTAFDISIDNGNEDLAEILQIAMQNQINTNPESPDTVTIHAATPQFIIGPGGVVN
LTDETGVSAVQFGNSSTSVLATLAALAEASAPLSNSSETPVATEEVVTAESVDGAIQQVVSSGG
QQVITIVTDGIQLGNLHSIPTSGMGQPIIVTMPDGQQVLTVPATDIAEETVISEEPPAKRQCME
IIENRVESAEIEEREALQKQLDEANREAQKYRQQLLKKEQEAEAYRQKLEAMTRLQTNKEAV

hide sequence

Ensembl Acc Id:

ENSRNOP00000045035 ⟸ ENSRNOT00000045443

RefSeq Acc Id:	XP_038961617 ⟸ XM_039105689
- Peptide Label:	isoform X1
- UniProtKB:	A6HPY8 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000083625 ⟸ ENSRNOT00000111964

Ensembl Acc Id:

ENSRNOP00000078447 ⟸ ENSRNOT00000109155

RefSeq Acc Id:	NP_001385853 ⟸ NM_001398924
- Peptide Label:	isoform 3
- UniProtKB:	A0A8I5ZWD2 (UniProtKB/TrEMBL), A0A0G2K5B7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	NP_001385852 ⟸ NM_001398923
- Peptide Label:	isoform 2
- UniProtKB:	A6HPY8 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063140445 ⟸ XM_063284375
- Peptide Label:	isoform X6

RefSeq Acc Id:	XP_063140447 ⟸ XM_063284377
- Peptide Label:	isoform X8

RefSeq Acc Id:	XP_063140446 ⟸ XM_063284376
- Peptide Label:	isoform X7

RefSeq Acc Id:	XP_063140444 ⟸ XM_063284374
- Peptide Label:	isoform X4
- UniProtKB:	A0A0G2K5B7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063140442 ⟸ XM_063284372
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_063140443 ⟸ XM_063284373
- Peptide Label:	isoform X3
- UniProtKB:	A0A8I5ZWD2 (UniProtKB/TrEMBL), A0A0G2K5B7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063140448 ⟸ XM_063284378
- Peptide Label:	isoform X9

RefSeq Acc Id:	XP_063140441 ⟸ XM_063284371
- Peptide Label:	isoform X2

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q4KM28-F1-model_v2	AlphaFold	Q4KM28	1-304	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13692390

Promoter ID:

EPDNEW_R2915

Type:

multiple initiation site

Name:

Gabpb1_1

Description:

GA binding protein transcription factor, beta subunit 1

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	3	119,135,389 - 119,135,449	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1560391	AgrOrtholog
BioCyc Gene	G2FUF-48022	BioCyc
Ensembl Genes	ENSRNOG00000010659	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
	ENSRNOG00000053439	UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000045443	ENTREZGENE
	ENSRNOT00000045443.7	UniProtKB/TrEMBL
	ENSRNOT00000081052.3	UniProtKB/TrEMBL
	ENSRNOT00000109155	ENTREZGENE
	ENSRNOT00000109155.2	UniProtKB/TrEMBL
Gene3D-CATH	1.25.40.20	UniProtKB/TrEMBL
IMAGE_CLONE	IMAGE:7380252	IMAGE-MGC_LOAD
InterPro	Ank_Repeat/CDKN_Inhibitor	UniProtKB/TrEMBL
	Ankyrin-SOCS_Box	UniProtKB/TrEMBL
	Ankyrin_rpt	UniProtKB/TrEMBL
	Ankyrin_rpt-contain_sf	UniProtKB/TrEMBL
KEGG Report	rno:499883	UniProtKB/TrEMBL
MGC_CLONE	MGC:112921	IMAGE-MGC_LOAD
NCBI Gene	499883	ENTREZGENE
PANTHER	ANK_REP_REGION DOMAIN-CONTAINING PROTEIN	UniProtKB/TrEMBL
	ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 42	UniProtKB/TrEMBL
	ANKYRIN REPEAT PROTEIN	UniProtKB/TrEMBL
	GA-BINDING PROTEIN SUBUNIT BETA-1	UniProtKB/TrEMBL
Pfam	Ank	UniProtKB/TrEMBL
	Ank_2	UniProtKB/TrEMBL
PhenoGen	Gabpb1	PhenoGen
PRINTS	ANKYRIN	UniProtKB/TrEMBL
PROSITE	ANK_REP_REGION	UniProtKB/TrEMBL
	ANK_REPEAT	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000010659	RatGTEx
	ENSRNOG00000053439	RatGTEx
SMART	ANK	UniProtKB/TrEMBL
Superfamily-SCOP	ANK	UniProtKB/TrEMBL
UniProt	A0A0G2K5B7	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I5ZWD2	ENTREZGENE
	A6HPY8	ENTREZGENE, UniProtKB/TrEMBL
	F7FDI9_RAT	UniProtKB/TrEMBL
	Q4KM28	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2018-05-25	Gabpb1	GA binding protein transcription factor subunit beta 1	Gabpb1	GA binding protein transcription factor, beta subunit 1	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2011-02-17	Gabpb1	GA binding protein transcription factor, beta subunit 1	Gabpb1	GA repeat binding protein, beta 1	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-09-05	Gabpb1	GA repeat binding protein, beta 1	RGD1560391	similar to GA binding protein transcription factor, beta subunit 2 (GABPB2)	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-04-30	RGD1560391	similar to GA binding protein transcription factor, beta subunit 2 (GABPB2)	RGD1560391_predicted	similar to GA binding protein transcription factor, beta subunit 2 (GABPB2) (predicted)	'predicted' is removed	2292626	APPROVED
2006-03-10	RGD1560391_predicted	similar to GA binding protein transcription factor, beta subunit 2 (GABPB2) (predicted)		similar to GA binding protein beta chain (GABP-beta-2 subunit) (GABP-2) (GABP-beta-1 subunit) (GABPB-1) (Transcription factor E4TF1-53) (Transcription factor E4TF1-47) (Nuclear respiratory factor-2) (predicted)	Name updated	1299863	APPROVED
2006-03-07	RGD1560391_predicted	similar to GA binding protein beta chain (GABP-beta-2 subunit) (GABP-2) (GABP-beta-1 subunit) (GABPB-1) (Transcription factor E4TF1-53) (Transcription factor E4TF1-47) (Nuclear respiratory factor-2) (predicted)	LOC499883	similar to GA binding protein beta chain (GABP-beta-2 subunit) (GABP-2) (GABP-beta-1 subunit) (GABPB-1) (Transcription factor E4TF1-53) (Transcription factor E4TF1-47) (Nuclear respiratory factor-2)	Symbol and Name status set to approved	1299863	APPROVED
2006-02-09	LOC499883	similar to GA binding protein beta chain (GABP-beta-2 subunit) (GABP-2) (GABP-beta-1 subunit) (GABPB-1) (Transcription factor E4TF1-53) (Transcription factor E4TF1-47) (Nuclear respiratory factor-2)			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
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MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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