Helq (Rattus norvegicus - Norway rat) |
| Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
GRCr8 | 14 | 9,122,978 - 9,167,310 (+) | NCBI | GRCr8 | GRCr8 | | GRCr8 | GRCr8 Ensembl | 14 | 9,122,978 - 9,167,310 (+) | Ensembl | | | | GRCr8 | mRatBN7.2 | 14 | 8,818,582 - 8,862,926 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 14 | 8,818,592 - 8,862,960 (+) | Ensembl | | | | mRatBN7.2 | UTH_Rnor_SHR_Utx | 14 | 8,786,509 - 8,836,501 (+) | NCBI | UTH_Rnor_SHR_Utx | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 14 | 10,086,357 - 10,136,345 (+) | NCBI | UTH_Rnor_SHRSP_BbbUtx_1.0 | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 14 | 8,782,970 - 8,832,966 (+) | NCBI | UTH_Rnor_WKY_Bbb_1.0 | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 14 | 10,446,981 - 10,491,042 (+) | NCBI | Rnor_6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 14 | 10,446,993 - 10,491,190 (+) | Ensembl | | | rn6 | Rnor6.0 | Rnor_5.0 | 14 | 10,394,947 - 10,439,008 (+) | NCBI | Rnor_5.0 | Rnor_5.0 | rn5 | | RGSC_v3.4 | 14 | 10,102,501 - 10,137,153 (+) | NCBI | RGSC_v3.4 | RGSC_v3.4 | rn4 | | Celera | 14 | 8,927,629 - 8,971,937 (+) | NCBI | | Celera | | | Cytogenetic Map | 14 | p22 | NCBI | | | | |
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HELQ (Homo sapiens - human) |
| Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
GRCh38 | 4 | 83,407,346 - 83,455,883 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 4 | 83,407,343 - 83,455,855 (-) | Ensembl | | | hg38 | GRCh38 | GRCh37 | 4 | 84,328,499 - 84,377,036 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 4 | 84,547,523 - 84,596,049 (-) | NCBI | Build 36 | Build 36 | hg18 | NCBI36 | Celera | 4 | 81,618,948 - 81,667,478 (-) | NCBI | | Celera | | | Cytogenetic Map | 4 | q21.23 | NCBI | | | | | HuRef | 4 | 80,071,300 - 80,119,800 (-) | NCBI | | HuRef | | | CHM1_1 | 4 | 84,305,076 - 84,353,599 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 4 | 86,737,435 - 86,785,950 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Helq (Mus musculus - house mouse) |
| Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
GRCm39 | 5 | 100,910,010 - 100,946,529 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 5 | 100,910,011 - 100,946,464 (-) | Ensembl | | GRCm39 Ensembl | | GRCm39 | GRCm38 | 5 | 100,762,144 - 100,798,661 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 5 | 100,762,145 - 100,798,598 (-) | Ensembl | | | mm10 | GRCm38 | MGSCv37 | 5 | 101,191,167 - 101,227,619 (-) | NCBI | MGSCv37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 5 | 101,002,447 - 101,038,902 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 5 | 98,090,213 - 98,126,676 (-) | NCBI | | Celera | | | Cytogenetic Map | 5 | E4 | NCBI | | | | | cM Map | 5 | 48.52 | NCBI | | | | |
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Helq (Chinchilla lanigera - long-tailed chinchilla) |
| Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
ChiLan1.0 Ensembl | NW_004955474 | 6,281,231 - 6,322,615 (+) | Ensembl | | | | | ChiLan1.0 | NW_004955474 | 6,280,955 - 6,322,702 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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HELQ (Pan paniscus - bonobo/pygmy chimpanzee) |
| Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
NHGRI_mPanPan1-v2 | 3 | 46,607,651 - 46,656,212 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 4 | 46,797,016 - 46,849,457 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 4 | 40,740,392 - 40,788,907 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 4 | 46,586,882 - 46,635,108 (+) | NCBI | PanPan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 4 | 46,586,882 - 46,635,108 (+) | Ensembl | | | panPan2 | panpan1.1 |
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HELQ (Canis lupus familiaris - dog) |
| Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
CanFam3.1 | 32 | 7,245,867 - 7,290,138 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 32 | 7,245,230 - 7,290,014 (-) | Ensembl | | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 32 | 34,595,411 - 34,639,694 (+) | NCBI | Dog10K_Boxer_Tasha | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 32 | 7,267,433 - 7,311,664 (-) | NCBI | ROS_Cfam_1.0 | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 32 | 7,267,450 - 7,299,218 (-) | Ensembl | | | | ROS_Cfam_1.0 Ensembl | UMICH_Zoey_3.1 | 32 | 7,337,423 - 7,380,288 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 32 | 7,206,724 - 7,251,379 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 32 | 32,710,331 - 32,754,719 (+) | NCBI | UU_Cfam_GSD_1.0 | UU_Cfam_GSD_1.0 | | |
|
Helq (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
| Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
HiC_Itri_2 | NW_024405285 | 5,062,206 - 5,104,054 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936738 | 1,224,312 - 1,265,786 (+) | Ensembl | | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936738 | 1,224,072 - 1,265,887 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
|
HELQ (Sus scrofa - pig) |
| Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
Sscrofa11.1 Ensembl | 8 | 135,026,315 - 135,061,043 (+) | Ensembl | | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 8 | 135,026,117 - 135,061,051 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 8 | 144,322,634 - 144,357,373 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
|
HELQ (Chlorocebus sabaeus - green monkey) |
| Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
ChlSab1.1 | 7 | 31,799,072 - 31,846,942 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 7 | 31,797,747 - 31,846,760 (-) | Ensembl | | ChlSab1.1 Ensembl | chlSab2 | Vervet-AGM | Vero_WHO_p1.0 | NW_023666037 | 10,394,630 - 10,442,558 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Helq (Heterocephalus glaber - naked mole-rat) |
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Helq (Rattus rattus - black rat) |
|