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Gene: Dbndd2 (dysbindin domain containing 2) Rattus norvegicus

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Symbol:

Dbndd2

Name:

dysbindin domain containing 2

RGD ID:

1559521

Description:

Orthologous to human DBNDD2 (dysbindin domain containing 2); INTERACTS WITH 1-naphthyl isothiocyanate; 2,3,7,8-tetrachlorodibenzodioxine; 4,4'-diaminodiphenylmethane.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

dysbindin (dystrobrevin binding protein 1) domain containing 2; dysbindin domain-containing protein 2; LOC499941; SCF apoptosis response protein 1

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	DBNDD2 (dysbindin domain containing 2)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OrthoDB, OrthoMCL, Panther, PhylomeDB
Mus musculus (house mouse):	Dbndd2 (dysbindin domain containing 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Dbndd2 (dysbindin domain containing 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	DBNDD2 (dysbindin domain containing 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	DBNDD2 (dysbindin domain containing 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Dbndd2 (dysbindin domain containing 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	DBNDD2 (dysbindin domain containing 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	DBNDD2 (dysbindin domain containing 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Dbndd2 (dysbindin domain containing 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Dbndd2 (dysbindin domain containing 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	DBNDD2 (dysbindin domain containing 2)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	DBNDD2 (dysbindin domain containing 2)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Dbndd2 (dysbindin domain containing 2)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Dbndd2 (dysbindin domain containing 2)	Alliance	DIOPT (Ensembl Compara\|OrthoFinder\|OrthoInspector\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	si:ch211-253b8.5	Alliance	DIOPT (Ensembl Compara\|InParanoid\|OMA\|OrthoFinder\|PANTHER)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	3	173,634,551 - 173,639,999 (+)	NCBI	GRCr8	GRCr8		GRCr8
mRatBN7.2	3	153,216,300 - 153,220,651 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	3	153,191,090 - 153,220,651 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	3	157,027,895 - 157,030,654 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	3	165,526,852 - 165,529,611 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	3	163,270,495 - 163,273,254 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	3	160,933,833 - 160,938,468 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	3	160,935,709 - 160,938,467 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	3	167,091,378 - 167,118,754 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	3	155,509,140 - 155,511,899 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	3	151,829,203 - 151,831,962 (+)	NCBI		Celera
Cytogenetic Map	3	q42	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Experimental Liver Cirrhosis (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dichloroethane (ISO)

1,2-dimethylhydrazine (ISO)

1-naphthyl isothiocyanate (EXP)

17beta-estradiol (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

4,4'-diaminodiphenylmethane (EXP)

4,4'-sulfonyldiphenol (EXP)

4-hydroxyphenyl retinamide (ISO)

5-aza-2'-deoxycytidine (ISO)

5-fluorouracil (ISO)

6-propyl-2-thiouracil (EXP)

acetamide (EXP)

Aflatoxin B2 alpha (ISO)

all-trans-retinoic acid (ISO)

amitrole (EXP)

Aroclor 1254 (ISO)

arsane (ISO)

arsenic atom (ISO)

arsenite(3-) (ISO)

azoxystrobin (ISO)

benzo[a]pyrene (ISO)

benzo[a]pyrene diol epoxide I (ISO)

beta-lapachone (ISO)

bisphenol A (EXP)

bisphenol F (EXP)

butanal (ISO)

C60 fullerene (EXP)

cadmium atom (ISO)

cadmium dichloride (EXP)

carbon nanotube (ISO)

chlorpyrifos (ISO)

choline (ISO)

cisplatin (ISO)

cyclosporin A (ISO)

deguelin (ISO)

fipronil (EXP)

folic acid (ISO)

genistein (ISO)

gentamycin (EXP)

L-methionine (ISO)

lead(0) (ISO)

manganese atom (ISO)

manganese(0) (ISO)

manganese(II) chloride (ISO)

N-nitrosodimethylamine (EXP)

okadaic acid (ISO)

paracetamol (EXP,ISO)

pentanal (ISO)

picoxystrobin (ISO)

pirinixic acid (ISO)

progesterone (ISO)

rotenone (ISO)

sodium arsenate (ISO)

sodium arsenite (ISO)

thioacetamide (EXP)

titanium dioxide (ISO)

triclosan (ISO)

triptonide (ISO)

urethane (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

apoptotic process (ISO)

ERK1 and ERK2 cascade (ISO)

monoatomic ion homeostasis (ISO)

negative regulation of protein kinase activity (ISO)

neurogenesis (ISO)

neuron projection development (ISO)

regulation of catalytic activity (ISO)

Cellular Component

cytoplasm (IEA)

endoplasmic reticulum (ISO)

lysosome (ISO)

Molecular Function

ATPase binding (ISO)

protein binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	GOA pipeline	RGD automated data pipeline
3.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:12477932	PMID:16305340	PMID:16618118

Genomics

Comparative Map Data

Dbndd2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	3	173,634,551 - 173,639,999 (+)	NCBI	GRCr8	GRCr8		GRCr8
mRatBN7.2	3	153,216,300 - 153,220,651 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	3	153,191,090 - 153,220,651 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	3	157,027,895 - 157,030,654 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	3	165,526,852 - 165,529,611 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	3	163,270,495 - 163,273,254 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	3	160,933,833 - 160,938,468 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	3	160,935,709 - 160,938,467 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	3	167,091,378 - 167,118,754 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	3	155,509,140 - 155,511,899 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	3	151,829,203 - 151,831,962 (+)	NCBI		Celera
Cytogenetic Map	3	q42	NCBI

DBNDD2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	20	45,405,993 - 45,410,610 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	20	45,405,616 - 45,410,870 (+)	Ensembl			hg38	GRCh38
GRCh37	20	44,034,633 - 44,039,250 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	20	43,468,085 - 43,472,661 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	20	43,425,114 - 43,431,263	NCBI
Celera	20	40,743,180 - 40,747,756 (+)	NCBI		Celera
Cytogenetic Map	20	q13.12	NCBI
HuRef	20	40,776,125 - 40,780,742 (+)	NCBI		HuRef
CHM1_1	20	43,937,170 - 43,941,787 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	20	47,141,855 - 47,146,472 (+)	NCBI		T2T-CHM13v2.0

Dbndd2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	2	164,309,073 - 164,335,243 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	2	164,328,026 - 164,335,239 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	2	164,467,153 - 164,493,323 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	2	164,486,106 - 164,493,319 (+)	Ensembl			mm10	GRCm38
MGSCv37	2	164,311,640 - 164,318,823 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	2	164,171,646 - 164,181,968 (+)	NCBI		MGSCv36	mm8
Celera	2	170,423,165 - 170,430,358 (+)	NCBI		Celera
Cytogenetic Map	2	H3	NCBI
cM Map	2	85.17	NCBI

Dbndd2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955445	11,931,200 - 11,975,660 (-)	Ensembl
ChiLan1.0	NW_004955445	11,931,996 - 11,936,534 (-)	NCBI	ChiLan1.0	ChiLan1.0

DBNDD2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	21	51,141,392 - 51,146,004 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	20	51,134,500 - 51,139,112 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	20	41,738,913 - 41,743,520 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	20	42,828,136 - 42,833,333 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	20	42,829,178 - 42,833,333 (+)	Ensembl			panPan2	panpan1.1

DBNDD2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	24	32,661,966 - 32,701,789 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	24	32,697,708 - 32,700,203 (+)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	24	32,340,349 - 32,345,274 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	24	33,405,822 - 33,410,754 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	24	33,372,082 - 33,411,668 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	24	32,667,014 - 32,671,933 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	24	32,782,615 - 32,787,537 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	24	33,327,472 - 33,331,798 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Dbndd2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024408640	192,035,029 - 192,045,621 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936514	7,488,679 - 7,526,802 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936514	7,488,672 - 7,499,238 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

DBNDD2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	17	47,725,132 - 47,729,668 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	17	47,686,220 - 47,729,663 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	17	67,792,650 - 67,795,261 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

DBNDD2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	2	18,424,594 - 18,429,086 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
Vero_WHO_p1.0	NW_023666050	67,066,329 - 67,071,031 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Dbndd2
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624790	9,091,461 - 9,095,722 (-)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624790	9,091,461 - 9,095,889 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Dbndd2
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	5	153,474,942 - 153,501,787 (-)	NCBI		Rrattus_CSIRO_v1

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	175
Count of miRNA genes:	120
Interacting mature miRNAs:	131
Transcripts:	ENSRNOT00000019688
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
12879876	Bw182	Body weight QTL 182		0.003	body mass (VT:0001259)	body weight (CMO:0000012)	3	141555229	186555229	Rat
2301411	Bp320	Blood pressure QTL 320		0.001	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	3	141555229	186555229	Rat
1582233	Insul10	Insulin level QTL 10	5.4	0.0015	blood insulin amount (VT:0001560)	serum insulin level times blood glucose level (CMO:0002040)	3	133259579	178259579	Rat
1300113	Bp176	Blood pressure QTL 176	3.9		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	3	166376089	177728348	Rat
12879872	Cm97	Cardiac mass QTL 97		0.001	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	3	141555229	186555229	Rat
12879873	Cm96	Cardiac mass QTL 96		0.001	heart mass (VT:0007028)	heart wet weight to body weight ratio (CMO:0002408)	3	141555229	186555229	Rat
1578653	Vnigr3	Vascular neointimal growth QTL 3	3.1		artery morphology trait (VT:0002191)	artery neointimal hyperplastic lesion area (CMO:0001414)	3	151075912	189428310	Rat
2302373	Gluco39	Glucose level QTL 39	5.01		blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	3	129154923	182114333	Rat
12879874	Cm98	Cardiac mass QTL 98		0.005	heart right ventricle mass (VT:0007033)	heart right ventricle weight to body weight ratio (CMO:0000914)	3	141555229	186555229	Rat
12879875	Kidm64	Kidney mass QTL 64		0.001	kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	3	141555229	186555229	Rat
1298068	Bp167	Blood pressure QTL 167		0.004	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	3	161492708	189428310	Rat
70216	Cm14	Cardiac mass QTL 14	2.1		heart mass (VT:0007028)	heart wet weight (CMO:0000069)	3	51581665	184004958	Rat
8552791	Vie2	Viral induced encephalitis QTL 2	4.1		brain integrity trait (VT:0010579)	encephalitis incidence/prevalence measurement (CMO:0002361)	3	166376089	189428310	Rat
61335	Bp20	Blood pressure QTL 20	3		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	3	161799493	176036425	Rat
1578754	Stresp16	Stress response QTL 16	4	0.001	blood renin amount (VT:0003349)	plasma renin activity level (CMO:0000116)	3	133134628	178134628	Rat
1331726	Bp208	Blood pressure QTL 208	3.129		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	3	161799270	187311134	Rat
1582213	Insul6	Insulin level QTL 6	3.7	0.0009	blood insulin amount (VT:0001560)	calculated serum insulin level (CMO:0000359)	3	155759447	189428310	Rat
1598854	Memor10	Memory QTL 10	2		exploratory behavior trait (VT:0010471)	average horizontal distance between subject and target during voluntary locomotion in an experimental apparatus (CMO:0002674)	3	166376089	189428310	Rat
9589106	Insul23	Insulin level QTL 23	13.86	0.001	blood insulin amount (VT:0001560)	plasma insulin level (CMO:0000342)	3	152055202	189428310	Rat
10755461	Coatc16	Coat color QTL 16			coat/hair pigmentation trait (VT:0010463)	pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)	3	142898802	187898802	Rat
8662816	Vetf4	Vascular elastic tissue fragility QTL 4	4		renal artery integrity trait (VT:0010642)	number of ruptures of the internal elastic lamina of the renal arteries (CMO:0002563)	3	79649560	177741895	Rat
1559282	Emca5	Estrogen-induced mammary cancer QTL 5	3.9		mammary gland integrity trait (VT:0010552)	percentage of study population developing mammary tumors during a period of time (CMO:0000948)	3	145335553	189428310	Rat
1582256	Insul9	Insulin level QTL 9	4.4	0.0016	blood insulin amount (VT:0001560)	absolute change in serum insulin level (CMO:0002038)	3	155759447	189428310	Rat
1576306	Schws3	Schwannoma susceptibility QTL 3		0.001	nervous system integrity trait (VT:0010566)	percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017)	3	139299381	184299381	Rat
1300159	Kidm4	Kidney mass QTL 4	3.83		kidney mass (VT:0002707)	right kidney wet weight to body weight ratio (CMO:0001953)	3	141508991	177728348	Rat
2301971	Cm71	Cardiac mass QTL 71	4.63		heart left ventricle mass (VT:0007031)	heart left ventricle weight (CMO:0000776)	3	131036586	176036586	Rat
631673	Iddm13	Insulin dependent diabetes mellitus QTL 13	1.3	0.663	blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	3	137114333	182114333	Rat
1582248	Insul7	Insulin level QTL 7	3.9	0.0041	blood insulin amount (VT:0001560)	calculated serum insulin level (CMO:0000359)	3	155759447	189428310	Rat
2301970	Bw81	Body weight QTL 81	5.19		body mass (VT:0001259)	body weight (CMO:0000012)	3	131036586	176036586	Rat
1578666	Vnigr1	Vascular neointimal growth QTL 1	4.6		artery morphology trait (VT:0002191)	artery lumen area (CMO:0001409)	3	151075912	189428310	Rat
1578656	Vnigr2	Vascular neointimal growth QTL 2	4.2		artery morphology trait (VT:0002191)	lesioned artery residual lumen area (CMO:0001417)	3	151075912	189428310	Rat
12879871	Am7	Aortic mass QTL 7		0.001	aorta mass (VT:0002845)	aorta weight to aorta length to body weight ratio (CMO:0002722)	3	141555229	186555229	Rat
631541	Bp81	Blood pressure QTL 81	4		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	3	144575244	189428310	Rat

Markers in Region

RH127528

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	3	153,220,349 - 153,220,558 (+)	MAPPER	mRatBN7.2
Rnor_6.0	3	160,938,167 - 160,938,375	NCBI	Rnor6.0
Rnor_5.0	3	167,118,453 - 167,118,661	UniSTS	Rnor5.0
RGSC_v3.4	3	155,511,598 - 155,511,806	UniSTS	RGSC3.4
Celera	3	151,831,661 - 151,831,869	UniSTS
RH 3.4 Map	3	1424.5	UniSTS
Cytogenetic Map	3	q42	UniSTS

RH125100

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	3	153,220,383 - 153,220,570 (+)	MAPPER	mRatBN7.2
Rnor_6.0	3	160,938,201 - 160,938,387	NCBI	Rnor6.0
Rnor_5.0	3	167,118,487 - 167,118,673	UniSTS	Rnor5.0
RGSC_v3.4	3	155,511,632 - 155,511,818	UniSTS	RGSC3.4
Celera	3	151,831,695 - 151,831,881	UniSTS
Cytogenetic Map	3	q42	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	163	91	90	59	91	59	6	355	191	11	142	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001047111	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001429173	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006235614	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AY113696	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC158561	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH474005	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ213987	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ220039	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000003	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000019688 ⟹ ENSRNOP00000019688

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0 Ensembl	3	160,935,709 - 160,938,467 (+)	Ensembl

RefSeq Acc Id:

NM_001047111 ⟹ NP_001040576

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	173,637,240 - 173,639,999 (+)	NCBI
mRatBN7.2	3	153,217,892 - 153,220,651 (+)	NCBI
Rnor_6.0	3	160,935,709 - 160,938,468 (+)	NCBI
Rnor_5.0	3	167,091,378 - 167,118,754 (+)	NCBI
RGSC_v3.4	3	155,509,140 - 155,511,899 (+)	RGD
Celera	3	151,829,203 - 151,831,962 (+)	RGD

Sequence:

show sequence

GGTGTCTGGAACTGACATCCCCATTGTGGAACCAGGGCCAGCCCTGCCTCTATCTGAGTCTTGA
CGTTTGTAGGACGAGTCTTATTTCACAAAGATTAAGAGGCTGCTGAGGTCAGAGCCGTCCAGAC
TGGAAGCGAAGGCTGTGTTGCTGGGATGCCAGCTGCCGAGGGGCTGCTTAAGCCTTGGCCCCCA
CTACTTTCTGTTTCAGCCCCACTTCTGTGCGTGTCTTACTCCATTACCCCCAGGGGCTGACATG
GACCCAAATCCACGAGCAGCCCTGGAGCGGCAGCAGCTGCGTCTCAGGGAGCGGCAGAAGTTCT
TCGAGGACATTTTACAGCCAGAGACAGAGTTTGTTTTCCCCCTATCCCATCTGCATCTCGAGTC
ACAAAGACCCCCCATAGGTAGCATCTCCTCGATGGAAGTGAATGTGGACACACTGGAGCAGGTG
GAATTTATTGACCTTGCGGATCAGGATGGAGCAGATGTGTTCTTACCTTGTGAGGATTCTCCTC
CAACTCCCCAGAGGTCTGGAGTGGATGACCACCCAGAGGAGCTGAGCCTGCTGGTACCCACGTC
AGACAGGACCACATCCCGGACCTCCTCCTTGTCCTCTGACTCCTCCAACCTGCGCAGTCCAAAT
CCAAGTGATGGGGGAGGAGACACTCCCTTGGCACAGTCTGACGAGGAGGATGGGGACGGTGGAG
GGGCAGAACCTGGACCTTGCAGCTAGCAGAGGCCCCTTACAAACTGAGCGATCTGGCTGTTCTC
CATGGAGAGGAGACCTTAGGTCCACCAGAGCACTCTGGAGAAGACCTGACACTTTACTTACATC
AGCACCAAAGGGAGGGAAGGATGGTGGATGGTGTGCCTGAGAGTTAGCCTCCCCGCTTTACTGA
TAACGCTGTCCTGCTGCCACGCCCCCACAGTGCTTTCTTCTGAGATAGGACTTCCAAGTGAGAC
TCTCGAAGGTGAGGTGGGACAAGATGCCACTGTTTTCTTACTCCCCTCCTGCCCCCAAATGATC
CTGTAGTCTCCCACTAGTCTCCTAAGCCAGTGTCTCTGAGGGAAAGTTCTGAGGAGTTCCACTT
TGCAGTTATCCTGCCTCTATAAGTCCTTTCTGGGAACAGGATATGGTATAAATAATAAATAATA
CTGTACCACTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_006235614 ⟹ XP_006235676

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	173,634,551 - 173,639,999 (+)	NCBI
mRatBN7.2	3	153,216,300 - 153,220,651 (+)	NCBI
Rnor_6.0	3	160,933,833 - 160,938,468 (+)	NCBI
Rnor_5.0	3	167,091,378 - 167,118,754 (+)	NCBI

Sequence:

show sequence

CGTGCGCGTGGTCGTTGCGTGGGCGCTGCTCTGGAGTCGAAGAGCATCAAGTGTGCGTGGGCCG
GAGCCGGCGCGTGTGCCCGCAGTCGCTGTGCGCGGGGCGGGGGTGCCGCAAGTGCCTTGGGCGC
GCGCAGCCTCGCACGGGCGGAGCGAGGAGGGATGCGTGCGGGAACTTTTCGCCCGCCCCGCAAG
TACGGGTCCCGGCGTTCAGAGGAGCTGTCCTCCGCCGCCAGCCCCGAGTGCCCGCCCCGCCCCC
ACTTCCGCCTCCCGCCTCTTCCTCGTTCCCGGCTCCCAGGGCCGCCCGGTCCCCAGGGAACCCC
GCAGGCACAGCCCCACCCGGCCGGCGCTGCTCGCTCCCACGCCCCCGCCGCCGCCTGTCGGGAG
CGCACCCAGCGAGCCAGAAGGCGCGGGCGCTGCAGCCCCACTTCTGTGCGTGTCTTACTCCATT
ACCCCCAGGGGCTGACATGGACCCAAATCCACGAGCAGCCCTGGAGCGGCAGCAGCTGCGTCTC
AGGGAGCGGCAGAAGTTCTTCGAGGACATTTTACAGCCAGAGACAGAGTTTGTTTTCCCCCTAT
CCCATCTGCATCTCGAGTCACAAAGACCCCCCATAGGTAGCATCTCCTCGATGGAAGTGAATGT
GGACACACTGGAGCAGGTGGAATTTATTGACCTTGCGGATCAGGATGGAGCAGATGTGTTCTTA
CCTTGTGAGGATTCTCCTCCAACTCCCCAGAGGTCTGGAGTGGATGACCACCCAGAGGAGCTGA
GCCTGCTGGTACCCACGTCAGACAGGACCACATCCCGGACCTCCTCCTTGTCCTCTGACTCCTC
CAACCTGCGCAGTCCAAATCCAAGTGATGGGGGAGGAGACACTCCCTTGGCACAGTCTGACGAG
GAGGATGGGGACGGTGGAGGGGCAGAACCTGGACCTTGCAGCTAGCAGAGGCCCCTTACAAACT
GAGCGATCTGGCTGTTCTCCATGGAGAGGAGACCTTAGGTCCACCAGAGCACTCTGGAGAAGAC
CTGACACTTTACTTACATCAGCACCAAAGGGAGGGAAGGATGGTGGATGGTGTGCCTGAGAGTT
AGCCTCCCCGCTTTACTGATAACGCTGTCCTGCTGCCACGCCCCCACAGTGCTTTCTTCTGAGA
TAGGACTTCCAAGTGAGACTCTCGAAGGTGAGGTGGGACAAGATGCCACTGTTTTCTTACTCCC
CTCCTGCCCCCAAATGATCCTGTAGTCTCCCACTAGTCTCCTAAGCCAGTGTCTCTGAGGGAAA
GTTCTGAGGAGTTCCACTTTGCAGTTATCCTGCCTCTATAAGTCCTTTCTGGGAACAGGATATG
GTATAAATAATAAATAATACTGTACCACTCA

hide sequence

Protein Sequences


Protein RefSeqs	NP_001040576	(Get FASTA)	NCBI Sequence Viewer
	NP_001416102	(Get FASTA)	NCBI Sequence Viewer
	XP_006235676	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAI58562	(Get FASTA)	NCBI Sequence Viewer
	AAM77462	(Get FASTA)	NCBI Sequence Viewer
	EDL96516	(Get FASTA)	NCBI Sequence Viewer
	EDL96517	(Get FASTA)	NCBI Sequence Viewer
	EDL96518	(Get FASTA)	NCBI Sequence Viewer
	EDL96519	(Get FASTA)	NCBI Sequence Viewer
	EDL96520	(Get FASTA)	NCBI Sequence Viewer
	EDL96521	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000096565
	ENSRNOP00000096565.2
	ENSRNOP00000099032
	ENSRNOP00000099032.1
	ENSRNOP00000108111.1

RefSeq Acc Id:	NP_001040576 ⟸ NM_001047111
- UniProtKB:	Q331S7 (UniProtKB/TrEMBL), A6JX91 (UniProtKB/TrEMBL), A0A8I5ZPL9 (UniProtKB/TrEMBL), A6JX90 (UniProtKB/TrEMBL)
- Sequence:	show sequence MDPNPRAALERQQLRLRERQKFFEDILQPETEFVFPLSHLHLESQRPPIGSISSMEVNVDTLEQ VEFIDLADQDGADVFLPCEDSPPTPQRSGVDDHPEELSLLVPTSDRTTSRTSSLSSDSSNLRSP NPSDGGGDTPLAQSDEEDGDGGGAEPGPCS hide sequence

RefSeq Acc Id:	XP_006235676 ⟸ XM_006235614
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I6AU01 (UniProtKB/TrEMBL)
- Sequence:	show sequence MDPNPRAALERQQLRLRERQKFFEDILQPETEFVFPLSHLHLESQRPPIGSISSMEVNVDTLEQ VEFIDLADQDGADVFLPCEDSPPTPQRSGVDDHPEELSLLVPTSDRTTSRTSSLSSDSSNLRSP NPSDGGGDTPLAQSDEEDGDGGGAEPGPCS hide sequence

Ensembl Acc Id:

ENSRNOP00000019688 ⟸ ENSRNOT00000019688

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q331S7-F1-model_v2	AlphaFold	Q331S7	1-158	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1559521	AgrOrtholog
BioCyc Gene	G2FUF-46857	BioCyc
Ensembl Genes	ENSRNOG00000014480	Ensembl
	ENSRNOG00000014571	Ensembl
	ENSRNOG00000087784	ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000107125	ENTREZGENE
	ENSRNOT00000107125.2	UniProtKB/TrEMBL
	ENSRNOT00000123670.1	UniProtKB/TrEMBL
	ENSRNOT00000132829	ENTREZGENE
	ENSRNOT00000132829.1	UniProtKB/TrEMBL
IMAGE_CLONE	IMAGE:7387488	IMAGE-MGC_LOAD
InterPro	Dysbindin	UniProtKB/TrEMBL
	Integral_membrane_SYS1-rel	UniProtKB/TrEMBL
KEGG Report	rno:499941	UniProtKB/TrEMBL
MGC_CLONE	MGC:187243	IMAGE-MGC_LOAD
NCBI Gene	499941	ENTREZGENE
PANTHER	Dysbindin	UniProtKB/TrEMBL
	DYSBINDIN DOMAIN-CONTAINING PROTEIN 2	UniProtKB/TrEMBL
Pfam	Dysbindin	UniProtKB/TrEMBL
	SYS1	UniProtKB/TrEMBL
PhenoGen	Dbndd2	PhenoGen
RatGTEx	ENSRNOG00000014480	RatGTEx
	ENSRNOG00000014571	RatGTEx
	ENSRNOG00000087784	RatGTEx
UniProt	A0A8I5ZPL9	ENTREZGENE
	A0A8I6AU01	ENTREZGENE
	A0A8I6B4E1_RAT	UniProtKB/TrEMBL
	A0ABK0LCG8_RAT	UniProtKB/TrEMBL
	A0ABK0LZK9_RAT	UniProtKB/TrEMBL
	A6JX90	ENTREZGENE, UniProtKB/TrEMBL
	A6JX91	ENTREZGENE, UniProtKB/TrEMBL
	Q331S7	ENTREZGENE
UniProt Secondary	Q331S7	UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2016-04-13	Dbndd2	dysbindin domain containing 2	Dbndd2	dysbindin (dystrobrevin binding protein 1) domain containing 2	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-03-05	Dbndd2	dysbindin (dystrobrevin binding protein 1) domain containing 2	LOC499941	SCF apoptosis response protein 1	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2006-02-09	LOC499941	SCF apoptosis response protein 1			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - CTD