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Gene: Tnks1bp1 (tankyrase 1 binding protein 1) Rattus norvegicus

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Symbol:

Tnks1bp1

Name:

tankyrase 1 binding protein 1

RGD ID:

1312021

Description:

Predicted to enable ankyrin repeat binding activity; enzyme binding activity; and protein serine/threonine kinase activator activity. Predicted to be involved in cellular response to ionizing radiation and double-strand break repair. Predicted to be located in adherens junction and cytoplasm. Predicted to be part of CCR4-NOT complex. Predicted to be active in heterochromatin and nucleus. Orthologous to human TNKS1BP1 (tankyrase 1 binding protein 1); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene; 2,6-dinitrotoluene.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

182 kDa tankyrase-1-binding protein; LOC295707

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	3	90,542,006 - 90,566,720 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	3	90,542,033 - 90,566,713 (+)	Ensembl				GRCr8
mRatBN7.2	3	70,135,335 - 70,160,071 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	3	70,137,837 - 70,160,038 (+)	Ensembl				mRatBN7.2
Rnor_6.0	3	72,458,520 - 72,483,206 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	3	72,460,889 - 72,483,217 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	3	78,969,203 - 78,994,278 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	3	68,286,407 - 68,308,256 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	3	69,486,389 - 69,511,054 (+)	NCBI		Celera
RGSC_v3.1	3	68,181,199 - 68,203,439 (+)	NCBI
Cytogenetic Map	3	q24	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

myoepithelioma (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dimethylhydrazine (ISO)

17beta-estradiol (ISO)

2,2',4,4'-Tetrabromodiphenyl ether (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2,4,6-tribromophenol (ISO)

2,4-dinitrotoluene (EXP)

2,6-dimethoxyphenol (ISO)

2,6-dinitrotoluene (EXP)

2-bromohexadecanoic acid (ISO)

2-hydroxypropanoic acid (ISO)

3,3',4,4'-tetrachlorobiphenyl (ISO)

3,3',5,5'-tetrabromobisphenol A (ISO)

3,4-methylenedioxymethamphetamine (ISO)

4,4'-sulfonyldiphenol (ISO)

5-aza-2'-deoxycytidine (ISO)

6-propyl-2-thiouracil (EXP)

aflatoxin B1 (ISO)

amitrole (EXP)

amphetamine (EXP)

atrazine (ISO)

benzatropine (ISO)

benzo[a]pyrene (ISO)

bisphenol A (EXP,ISO)

bisphenol AF (ISO)

Bisphenol B (ISO)

Brodifacoum (EXP)

Butylbenzyl phthalate (ISO)

cadmium atom (ISO)

cadmium dichloride (ISO)

caffeine (ISO)

CGP 52608 (ISO)

chlordecone (ISO)

chlorpyrifos (ISO)

choline (ISO)

cisplatin (ISO)

clotrimazole (EXP)

corosolic acid (ISO)

coumarin (ISO)

Cuprizon (ISO)

DDE (ISO)

decabromodiphenyl ether (ISO)

dibenz[a,h]anthracene (ISO)

dibutyl phthalate (ISO)

diclofenac (ISO)

endosulfan (EXP)

enzyme inhibitor (ISO)

fenvalerate (EXP)

flutamide (EXP)

folic acid (ISO)

FR900359 (ISO)

furan (EXP)

furfural (ISO)

genistein (ISO)

hexadecanoic acid (ISO)

hydrogen peroxide (ISO)

isoflurane (ISO)

ivermectin (ISO)

L-methionine (ISO)

leflunomide (ISO)

paracetamol (EXP,ISO)

perfluorohexanesulfonic acid (ISO)

perfluorononanoic acid (ISO)

phenobarbital (EXP)

pirinixic acid (ISO)

propiconazole (EXP)

quercetin (ISO)

rac-lactic acid (ISO)

resveratrol (ISO)

SB 431542 (ISO)

silver atom (ISO)

silver(0) (ISO)

sodium arsenate (ISO)

sodium arsenite (ISO)

sodium chloride (ISO)

sulfadimethoxine (EXP)

sunitinib (ISO)

temozolomide (ISO)

titanium dioxide (ISO)

trichloroethene (EXP)

trovafloxacin (ISO)

tungsten (ISO)

urethane (ISO)

valproic acid (ISO)

zoledronic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cellular response to ionizing radiation (IBA,IEA,ISO)

double-strand break repair (IBA,IEA,ISO)

Cellular Component

adherens junction (IEA,ISO)

CCR4-NOT complex (IEA,ISO)

cytoplasm (IEA,ISO)

heterochromatin (IBA,IEA,ISO)

nucleus (IBA,IEA,ISO)

Molecular Function

ankyrin repeat binding (IEA,ISO)

enzyme binding (IEA,ISO)

protein binding (ISO)

protein serine/threonine kinase activator activity (IEA,ISO)

protein-containing complex binding (IEA,ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Rat ISS GO annotations from GOA human gene data--August 2006	GOA data from the GO Consortium
3.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:11854288	PMID:19558367	PMID:25468996	PMID:25749521	PMID:35352799

Genomics

Comparative Map Data

Tnks1bp1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	3	90,542,006 - 90,566,720 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	3	90,542,033 - 90,566,713 (+)	Ensembl				GRCr8
mRatBN7.2	3	70,135,335 - 70,160,071 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	3	70,137,837 - 70,160,038 (+)	Ensembl				mRatBN7.2
Rnor_6.0	3	72,458,520 - 72,483,206 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	3	72,460,889 - 72,483,217 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	3	78,969,203 - 78,994,278 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	3	68,286,407 - 68,308,256 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	3	69,486,389 - 69,511,054 (+)	NCBI		Celera
RGSC_v3.1	3	68,181,199 - 68,203,439 (+)	NCBI
Cytogenetic Map	3	q24	NCBI

TNKS1BP1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	11	57,299,642 - 57,324,952 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	11	57,299,630 - 57,325,682 (-)	Ensembl			hg38	GRCh38
GRCh37	11	57,067,116 - 57,092,426 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	11	56,823,679 - 56,848,989 (-)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	11	56,823,693 - 56,846,247	NCBI
Celera	11	54,426,072 - 54,451,439 (-)	NCBI		Celera
Cytogenetic Map	11	q12.1	NCBI
HuRef	11	53,415,974 - 53,441,296 (-)	NCBI		HuRef
CHM1_1	11	56,933,207 - 56,958,523 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	11	57,249,129 - 57,274,443 (-)	NCBI		T2T-CHM13v2.0

Tnks1bp1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	2	84,878,356 - 84,903,392 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	2	84,878,366 - 84,903,392 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	2	85,048,013 - 85,073,048 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	2	85,048,022 - 85,073,048 (+)	Ensembl			mm10	GRCm38
MGSCv37	2	84,890,617 - 84,913,205 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	2	84,849,610 - 84,877,968 (+)	NCBI		MGSCv36	mm8
Celera	2	86,649,238 - 86,671,815 (+)	NCBI		Celera
Cytogenetic Map	2	D	NCBI
cM Map	2	49.45	NCBI

Tnks1bp1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955511	2,359,444 - 2,378,559 (-)	Ensembl
ChiLan1.0	NW_004955511	2,359,581 - 2,378,389 (-)	NCBI	ChiLan1.0	ChiLan1.0

TNKS1BP1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	9	58,456,658 - 58,482,145 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	11	59,473,613 - 59,499,115 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	11	52,541,056 - 52,566,544 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	3	160,031,811 - 160,054,494 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	3	160,029,550 - 160,054,494 (-)	Ensembl			panPan2	panpan1.1

TNKS1BP1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	18	38,815,845 - 38,838,184 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	18	38,816,323 - 38,838,192 (+)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	18	38,358,735 - 38,383,227 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	18	39,494,524 - 39,519,053 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	18	39,494,533 - 39,519,038 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	18	39,077,099 - 39,101,577 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	18	38,650,608 - 38,675,079 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	18	39,281,367 - 39,305,861 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Tnks1bp1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404947	15,044,647 - 15,068,281 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936581	5,158,353 - 5,182,109 (+)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936581	5,158,424 - 5,182,099 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

LOC100625088
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa10.2	2	13,393,062 - 13,419,730 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

TNKS1BP1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	1	15,919,439 - 15,944,851 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	1	15,922,482 - 15,945,460 (+)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666038	113,262,664 - 113,287,622 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Tnks1bp1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624864	3,266,082 - 3,280,246 (+)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624864	3,262,973 - 3,280,099 (+)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Tnks1bp1
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	5	62,418,545 - 62,443,064 (+)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Tnks1bp1
154 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	46
Count of miRNA genes:	44
Interacting mature miRNAs:	46
Transcripts:	ENSRNOT00000012209
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1300178	Hrtrt4	Heart rate QTL 4	3.74		heart pumping trait (VT:2000009)	heart rate (CMO:0000002)	3	51490129	111359995	Rat
1358293	Bw38	Body weight QTL 38	6	0.0000031	body mass (VT:0001259)	body weight (CMO:0000012)	3	74364268	119364268	Rat
61377	Edpm3	Estrogen-dependent pituitary mass QTL 3	7.05	0.038	pituitary gland mass (VT:0010496)	pituitary gland wet weight (CMO:0000853)	3	73592611	110333156	Rat
1582238	Bw68	Body weight QTL 68	3.2	0.0064	body mass (VT:0001259)	body weight (CMO:0000012)	3	73592512	136118980	Rat
1582239	Epfw1	Epididymal fat weight QTL 1	4.5	0.0006	epididymal fat pad mass (VT:0010421)	epididymal fat pad weight to body weight ratio (CMO:0000658)	3	73592512	136118980	Rat
70216	Cm14	Cardiac mass QTL 14	2.1		heart mass (VT:0007028)	heart wet weight (CMO:0000069)	3	51581665	184004958	Rat
1354589	Bw31	Body weight QTL 31	3.3		body mass (VT:0001259)	body weight (CMO:0000012)	3	53651826	98651826	Rat
2303593	Gluco46	Glucose level QTL 46	3		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	3	48876619	93876619	Rat
1354590	Despr11	Despair related QTL 11		0.000031	locomotor behavior trait (VT:0001392)	amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)	3	48876619	93876619	Rat
2298542	Neuinf11	Neuroinflammation QTL 11	3.9		nervous system integrity trait (VT:0010566)	spinal cord complement component 1, q subcomponent, B chain mRNA level (CMO:0002126)	3	35403199	97383526	Rat
2292591	Esta4	Estrogen-induced thymic atrophy QTL 4			thymus mass (VT:0004954)	thymus wet weight (CMO:0000855)	3	67641776	167835660	Rat
1358362	Srcrt2	Stress Responsive Cort QTL 2	2.78		blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	3	58601291	153936591	Rat
737818	Hcar12	Hepatocarcinoma resistance QTL 12	2.6		liver integrity trait (VT:0010547)	volume of individual liver tumorous lesion (CMO:0001078)	3	49872657	138829559	Rat
631832	Sach1	Saccharin preference QTL 1	2.7	0.02	consumption behavior trait (VT:0002069)	calculated saccharin drink intake volume (CMO:0001600)	3	47904172	92904172	Rat
1582218	Bw74	Body weight QTL 74	3.9	0.0021	body mass (VT:0001259)	body weight (CMO:0000012)	3	73592512	136118980	Rat
1582221	Kidm30	Kidney mass QTL 30	3.5	0.0008	kidney mass (VT:0002707)	both kidneys wet weight (CMO:0000085)	3	85062224	136118980	Rat
631647	Bp122	Blood pressure QTL 122	6.2		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	3	51092561	96092561	Rat
1582210	Bw71	Body weight QTL 71	3.3	0.0012	body mass (VT:0001259)	body weight (CMO:0000012)	3	85062224	136118980	Rat
1300111	Rf12	Renal function QTL 12	3.78		renal blood flow trait (VT:2000006)	absolute change in renal blood flow rate (CMO:0001168)	3	81425008	141509147	Rat
9590286	Uminl1	Urine mineral level QTL 1	3.5	0.001	urine mineral amount (VT:0015086)	urine electrolyte level (CMO:0000593)	3	48657744	93657744	Rat
724523	Tsu1	Thymus enlargement suppressive QTL 1	3.84		thymus mass (VT:0004954)	thymus weight to body weight ratio (CMO:0000612)	3	70845569	136091483	Rat
8662816	Vetf4	Vascular elastic tissue fragility QTL 4	4		renal artery integrity trait (VT:0010642)	number of ruptures of the internal elastic lamina of the renal arteries (CMO:0002563)	3	79649560	177741895	Rat
2292613	Ept16	Estrogen-induced pituitary tumorigenesis QTL 16	8.3		pituitary gland mass (VT:0010496)	pituitary gland wet weight (CMO:0000853)	3	67641995	130815812	Rat
738019	Anxrr10	Anxiety related response QTL 10	3.9		exploratory behavior trait (VT:0010471)	number of entries into a discrete space in an experimental apparatus (CMO:0000960)	3	58925062	103925062	Rat
631841	Niddm39	Non-insulin dependent diabetes mellitus QTL 39	3.36		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	3	70311536	115311536	Rat
631200	Cm25	Cardiac mass QTL 25	4.8	0.0001	heart left ventricle mass (VT:0007031)	heart left ventricle wet weight (CMO:0000071)	3	81541464	126563126	Rat
9590136	Scort3	Serum corticosterone level QTL 3	23.37	0.001	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	3	48657744	93657744	Rat
61419	Cia11	Collagen induced arthritis QTL 11	5.6		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	3	50766145	95766145	Rat
61356	Bp37	Blood pressure QTL 37	3		blood pressure trait (VT:0000183)	systolic blood pressure (CMO:0000004)	3	51092561	96092561	Rat
1558650	Cm48	Cardiac mass QTL 48	4	0.0001	heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	3	50766145	95766145	Rat
1358905	Hrtrt17	Heart rate QTL 17	5.9	0.000014	heart pumping trait (VT:2000009)	heart rate (CMO:0000002)	3	36721849	110333156	Rat
8694196	Abfw2	Abdominal fat weight QTL 2	16.58	0.001	visceral adipose mass (VT:0010063)	abdominal fat pad weight to body weight ratio (CMO:0000095)	3	48657744	93657744	Rat
1354597	Kidm13	Kidney mass QTL 13	2.9		kidney mass (VT:0002707)	right kidney wet weight (CMO:0000082)	3	42158111	124558371	Rat
1358885	Bp251	Blood pressure QTL 251	3.8		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	3	1	141509147	Rat
8552950	Pigfal12	Plasma insulin-like growth factor 1 level QTL 12	7.3		blood insulin-like growth factor amount (VT:0010479)	plasma insulin-like growth factor 1 level (CMO:0001299)	3	48657744	93657744	Rat
8694386	Bw159	Body weight QTL 159	4.52	0.001	body lean mass (VT:0010483)	lean tissue morphological measurement (CMO:0002184)	3	48657744	93657744	Rat
1354604	Bw36	Body weight QTL 36	2.9		body mass (VT:0001259)	body weight (CMO:0000012)	3	42158111	124558371	Rat
1358888	Bp264	Blood pressure QTL 264	4.43		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	3	5675975	141509147	Rat
1358186	Ept2	Estrogen-induced pituitary tumorigenesis QTL 2	8.3		pituitary gland mass (VT:0010496)	pituitary gland wet weight (CMO:0000853)	3	67641995	130815812	Rat

Markers in Region

D3Rat35

Rat Assembly	Chr	Position (strand)	Source	JBrowse
GRCr8	3	90,546,613 - 90,546,792 (+)	Marker Load Pipeline
mRatBN7.2	3	70,139,962 - 70,140,141 (+)	MAPPER	mRatBN7.2
Rnor_6.0	3	72,463,100 - 72,463,278	NCBI	Rnor6.0
Rnor_5.0	3	78,974,172 - 78,974,350	UniSTS	Rnor5.0
RGSC_v3.4	3	68,288,134 - 68,288,313	RGD	RGSC3.4
RGSC_v3.4	3	68,288,135 - 68,288,313	UniSTS	RGSC3.4
Celera	3	69,490,948 - 69,491,126	UniSTS
RGSC_v3.1	3	68,184,506 - 68,184,685	RGD
SHRSP x BN Map	3	42.8298	UniSTS
SHRSP x BN Map	3	42.8298	RGD
FHH x ACI Map	3	44.9499	RGD
Cytogenetic Map	3	q24	UniSTS

RH129830

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	3	70,134,259 - 70,134,478 (+)	MAPPER	mRatBN7.2
Rnor_6.0	3	72,457,397 - 72,457,615	NCBI	Rnor6.0
Rnor_5.0	3	78,968,055 - 78,968,273	UniSTS	Rnor5.0
RGSC_v3.4	3	68,282,375 - 68,282,593	UniSTS	RGSC3.4
Celera	3	69,485,266 - 69,485,484	UniSTS
Cytogenetic Map	3	q24	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	160	91	90	59	92	59	6	356	192	11	139	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001429862	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001429863	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_001069984	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006224505	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006224506	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006234484	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006234485	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006234486	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017592170	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017602541	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039106449	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC114721	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000003	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000012209 ⟹ ENSRNOP00000012209

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	3	90,542,033 - 90,566,713 (+)	Ensembl
mRatBN7.2 Ensembl	3	70,137,837 - 70,160,038 (+)	Ensembl
Rnor_6.0 Ensembl	3	72,460,889 - 72,483,217 (+)	Ensembl

RefSeq Acc Id:

XM_006234484 ⟹ XP_006234546

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	90,544,408 - 90,566,720 (+)	NCBI
mRatBN7.2	3	70,137,754 - 70,160,071 (+)	NCBI
Rnor_6.0	3	72,460,905 - 72,483,206 (+)	NCBI
Rnor_5.0	3	78,969,203 - 78,994,278 (+)	NCBI

Sequence:

show sequence

GGCGGAGTCCCAGGTTGGGGAGGAGCGGGTTTTTCCCGTCTCCCATGAGGTGATTCCAGAGACT
TGAGAGTTTCTGGCCTTCTTGCTGTGCTCAGAGTGGACACCTCTAGTGGGGCTCCTGACCCAAG
AGGGCTGCCTCAGACACTGCAGGGTGTGCCGTATGTGATGAAAGGATCCACTCTCAGGGAAAGC
ACGGCCGTGGCTTCCCCACTGCCCCAGGATATGGAGGAGGAGCAGGCGCCCGTTGGCTCAGAGC
CAGGTGACCCACGAGCCAAACCCCCTGTCAAGCCCAAGCCCCGGAGCTTGCCCAGCAAGCCAGC
TCTGCCTGCCAAACCCAGCCTTCTGGTGCCTGTTGGGCCTCGTCCTCCTCGGGGTCCCCTGGCT
GAGCTGCCTTCTGCCCGGAAGATGAATATGCTGGCAGGACCTCAGCCCTATGGGGTCAGCAAGC
GTCCACTCCCATTTACATCAAAGCCTCCAGCTGAGGCAACTGCTGGGGGAGAAGTTACCCAAGA
GTCCGGGAAAGAGGACTTGCCCCCTTTAACACCGCCAGCTCGGTGCGCTGCTCTGGGGGGTGTG
CGGAAGGCCCCTGCCCCCTTCCGTCCCTCCTCTGAGCGGTTTGCAGCCTGTACAGTAGAAGAAA
TTTTGGCGAAGATGGAGCAGCCTCGGAAAGAGATCCCTGCTAGCCCTGACCGACTCTGGGGGTC
CCGCCTCACCTTTAACCACGATGGAAGCTCTCGATATGGCCCTAGGACCTTCGGTGCCTCCTGC
CCCAGAGAGGAGGATAATAAGACCCCTGCCAAAGCATCATCCCAGGAGAGGACAGCAGAGACTC
CCGCAGAGTGCCAGGAAGAGTGTAGCAAGACTCCTGAGGCGAGGATCCTCACTTCCAGCCTAGC
ACTGAACGGGGACCTGGCTAAACTGGCTAGCTCTGGACCACCTTCTGAGGTTTCCAAGACCTGG
GTCACCTCAAGTGCAGACCCTGTTTCAGAGCATGGCGTCTCTACCAGCCCAGTCCTCCTGGCTA
AAGTCTCTGTCCCAGCCTCCGAGTCTCCCCAGCTTTCAAGCCAACAGAGTTCTCCCTGCCAATC
TCAACTTTCAGAAACCCAGAGTCCTGCAGCTTCTGAGGGTTCGATCTACATCCCTGTGACTCCA
GCCTCCCCTAGTGTAGCCTTGCCTGAGGAGCCTCCCTGCCATTCCCCTAGCTCAGAGCTACCTG
CTGTGGCAGCCCCAGAAACCCTCAGACCCAACAGCTCTCCTGTGGAGACAGTCTCAGGGCACCA
CAGCCCAGAGCAGCCCCCAGTCCCCTTGCCTCAACCCTTGATTGAGGGGGCTGAGTTGCCGGAC
ATTACACGAACGTTCCCGTGTGGCGAGGAGGCAGCAGCCAGGGGTCACACAGAATCCCGTCCAA
GCAGCCTGGCTCAGCGCCGTTTCTCAGAAGGCGTACTTCGGCCACCTAGCCAGGACCAAGAGAA
GCTGGGAGGCTCACTGGCTGCTCTGCCCCAAGATCAAGGGAGCCAGTCTGCTCTAGATCGTCCC
TTTGGGAGTGGGACAGAGTCTAACTGGAGCTTGTCACAGTCATTTGAGTGGACCTTCCCCACAA
GGCCCTCAGGTCTGGGTGTGTGTCGGCTGGACTCCCCACCTCCATCCCCCATTACAGAAGCCAG
CGAGGCTGCAGAGGCTGCAGAAGCTGGCAACTGGGCTGCATCGGGCAGGGAAGAGGGAGTGTCC
CAGCTGGGACTGGGAACCCCATCAGCTCCAGAGAGCCCAGGAAAGCCTGTTTCTGGGGTTCAGG
GAAATGATCCAGGCATATCTCTAACCCAGAGAGATGGTGGAGATAGTCAGCCTCAGTCCCCAGC
TGTTCTATCCCCGACAGTTGAGGGCCCACCGGGAATACCCTTACTTCAGGCAAAGGAGAACTAT
GAGGACCAGGAGCCATTGGCGGGGCAGGAGTCCCCCATTACTTTGGCCACTAGGGAGGCAGCCC
TACCTGTGCTAGAGCCAGTACTGGGACAGCAGCAGCCAACACCCTCTGACCAGCCCTGCATCCT
CTTTGTGGATGTACCTGATCCCGGGCAGGCATTGTCCACTGAGGAGGAGGTGGTCACCCTAGGC
TGGGCAGAGACTACCCAGCCCGTGACAGAGGCTCAGGAACCCGGTAGCGTGTCTCCTGGGCCTA
CAGGCCCTGAAAGCAGTTCTCGATGGCTGGATGATCTCTTGGCATCACCACCACCCAACTCAGG
AGGCGCACGGCGGGCGGCTGGAGCCGAGCTAAAGGATTTACAGTCACCAAGCACCTGCTCTGAG
GGACTCCTTGGCTGGGCCCAGAAAGACCTGCAGAGTGAGTTTGGGGTTGTAGCAGACTCACACT
CCAGCGGTTTTGGTCCTTCCAGCTGGTCCCAAGATGCTTCTCAGACCTACAGCCTTGGAGGCAG
GAGCCCCGGAGGAGACCCTGGTCTTGGGAAGAGAGACTGGAGCAGCAAGTGTGGGCAAGGATCT
GGGGAGGGGAGCACTAGGGAGTGGGCCAGCAGATGCAGCCTTGGCCAAGAGGTGATGGGAATCG
GCAGCAGCCAAGATGAGTGTGAAGTGCCTGTCCATGAGCGGGCAGTGGGAAAGCCGGCCCAGCT
TGGGCTTGGCCCTCAGGGCCTGGAGGCTGATGCACAACAATGGGAGTTCGGGAAGAGGGATTCC
CAGGACCCTTACTCCAGCCTTGACAAAGAGCTCCAGGACCAGGAGTTCGGGAAGCGGGATTCCT
TGGGTTCTTTCAGCATCCAGGATGCAAGCCTTCAAGACTGGGAGTTTGGGAAGAGAGCGTCGGT
GAGCACCAACCAGAATACAGATGAAAACGATCAAGAGCTGCGGATGAAGAACCTCTCTGGTGGC
TATAGTAGCCAGGATGCTGAAGAGCAGGATCGGGAGTTTGAGAAGCGAGATTCTGTACTAGACA
CCCATGGCAGCAGGGCCATAGCCCAGCAGGACCAGGAGTTTGGGAAGAGTGCTTGGTTAAAGGA
TTACAGTGACAGCAGCTTAAGGGCGCTCAGCTCACAGGAAAGAGGATTCGAAACACGATCTCTG
AGCTCTGGGTTCAGCCCTGAAGAAGCTCAGCAGCAGGACGAGGAGTTTGAGAAGAAGACTCCAG
TTGGCGAAGACAGGTTTCGTGAGGCCGGCAGGGATGTGGGTCAACTGGAGGAAGGAGCATCTGG
GGGCCTGCTGAACCCCAGTACACCTAATTTGCAAGATGGAGCTGCCAGGCCGAAAGAAGAGGGC
AACTGGCAAGATGGTGCCCCCAGCCAGGAGATCACAAGGCTGCAGGGGAGAATGCAGGCAGAAA
GTCAGAACCCTACCAACGCGGAGTTGGAAGACAGAGCGAAAGAGCAGCGAGGCTGGGCTGGGGA
CTTCAGCCTTGGCGTTACAGCCCAGTCAGAGGCAGCATTTAGTCCAGGGCGGCAAGACTGGAGC
CGGCACTTGTGCACGGAGGCCTCTGAGGGTGGCTATCAGTTTGGCATCATTGGCAACGACAGAG
TAAGTGGTGCTGGCCTCAGCCCTTCCAGGAAGAGTGGACGTGGCCACTTTGTGCCTCCTGGAGA
GACAGAGGCCGGGGCTGTGGACTGGACTGACCAGCTCGGTCTCAGGAACTTGGAAGTGTCTAGC
TGTGTGAGTTCTGATGGCTCAAGTGAGGCTAGAGAGAATGTTGTGGAAAAAATGGGCTGGTCAG
ACAGCCTGAGCTTGAACAGTGGAGATTCTGAGGAGCCCAGGGGCATGGGAGTTGGAGAGAAGGA
CTGGACTTCCAATGTGGAGGCAAGGAACAGAGATTTGCCAGGGCAGGGAGAGGTAGGAGGGCAC
AGCCAGGCCAGAGAGAGTGGTGTGGGGGAGCCCGACTGGTCAGGGGTAGAGGCTGGAGAGTTCC
TTAAGTCAAGAGAGCGTGGAGTTGGACAGGCAGATTGGACACCTGATCTTGGATTGAGAAACAT
GGCCCCAGGGGCAGGCTGCAGCCCTGGAGAGCCCAGGGAACTTGGGGTGGGTCAGGTAGACTGG
GGTGACAATCTAGGCCTTAGGAACTTGGAGGTGTCCTGTGACCTAGAGTCAGGAGGCTCTCGGG
GCTGTGGAGTTGGGCAAATGGACTGGGCCCAGGACTTGGGACTCCGGAACCTCAGGCTCTGTGG
AGCCCCAAGTGAAGTTAGGGAGTGTGGGGTGGGGAGAGTGGGCCCTGACCTAGAGCTAGACCCC
AAGAGTAGTGGCAGTTTGTCCCCTGGTCTGGAGACTGAGGACCCCTTGGAAGCCAGGGAGCTGG
GGGTTGGTGAAACAAGTGGGCCAGAGACACAGGGTGAAGACAGCTCATCACCTTCCTTTGAGAC
TCATTCTGAAGACACTGGAATGGATGCAGGAGAAGCCCCCAGCTTGGGAGCCAGCCCCAGCAGG
TGCCTGGCTCGCTCTCCACCTTCTGGCTCCCAGAGCCTTCTGGAGGGGATCATGCCAGCCAGCG
GCTCTAAGGGAGCTACTCAGAGGGAATCAGCAGCTTCTGGCCTCAGGGTTCTGTTGGAGGAGGA
TGGCGTCCCCACAGGTGCTGGCCAAGGGGAGCCCCAGGAGTCGAGCAGTGACCCTTTGCCTTCC
TCGAGGCCTCAGCCTGATGGCGAAGCCAGCCAGGTAGAAGAGGTGGATGGCACCTGGAGTCTTA
CAGGGGGGGCTAGGCAAGATGAGCAGGGGTCAGCCCCGCCCCCCCGGCGGCCTCCCCGAGGACT
TCTGCCCAGCTGCCCCAGTGAGGACTTCTCCTTTATAGAGGACACTGAGATCCTTGATAGCGCC
ATGTATCGGAGTCGTGCCAACCTAGGGCGTAAGCGGGGGCATCGGGCCCCAGCCATCCGACCTG
GGGGTACTCTGGGCCTGTCAGAAACAGCAGACATGGATGCTCGGCTCTTCCAAGATTCAACTGA
GCCAAGGGCCTCCCGGGTGCCATCTTCAGATGAGGAGGTAGTGGAGGAGCCTCAGAGCCGCCGG
ACACGGATGTCCTTAGGCACTAAAGGACTGAAAGTCAACCTGTTTCCTGGCCTGAGCCCATCCG
CCTTGAAGGCCAAGCTACGCTCCCGGAACCGCTCAGCTGAGGAAGGGGAGGTGACAGAGAGCAA
ATCAAGCCAGAAAGAGTCTTCTGTCCAGCGCTCTAAGTCCTGCAAGGTCCCAGGGTTAGGGAAG
CCCCTTACATTACCCCCAAAGCCAGAAAAATCCTCAGGGTCAGAAGGATCATCGCCCAACTGGC
TGCAAGCCCTGAAGCTAAAAAAGAAAAAGATCTGATCAGAGGCTGAGGTCCTTCCCATCTGGCA
GTCTCAGGCAGTGCCATTCCTGTGGGGTCCCCAAGTGAGGAGACAGCTGGAGCCCCACCAGGGC
ACAGACTGCAGCCTCCTTTCCCCTCCACTTCTGCGGAGTGTCTGGGAGGCACATTTATGCACTT
TGTATCACCGTCCCAACTTCTTGCACCCCTTCCGCCCCAGCTGGACCCCGTCCCCAATGGTGGA
AGGTCTTGTACCCCTCAGTCTTCCCTTCACCCTCTTTGCTTCCATCTTCGACCTCCCTTGGGTT
TTCTTTTGATACCAATTTATATCATTTTTATAAAAGCCTTTGATTTTTGTAATGGGTGGGGCCC
CACCCCAACCCCACCCCAGGTCTCCCTCTGCCCACTAGGTGCCCCACAGAGACCAATGACATTT
TACCACTTGAAACAATGAATAAAGTTTTTTGGGAATTGG

hide sequence

RefSeq Acc Id:

XM_006234485 ⟹ XP_006234547

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	90,542,191 - 90,566,720 (+)	NCBI
mRatBN7.2	3	70,135,792 - 70,160,071 (+)	NCBI
Rnor_6.0	3	72,458,905 - 72,483,206 (+)	NCBI
Rnor_5.0	3	78,969,203 - 78,994,278 (+)	NCBI

Sequence:

show sequence

CCCTCCTTGCCCTCACCGGTCCCCTTCCATGGCTCCCACGGCACGCCCCCATCCACCCCAGGCC
GCCCCCACCGAGTCCCTGTCGCCAGTCCTCAGTCTGTTCCTTCGCGGGCTGCTTGGCATCTCGC
GCAGTCTTCGGCTGCTGCCGCCCCCTCCTTCTCCACCCTCGTCTGCTCCTCCTCTTCGGCTAGC
CGCTCGGTGTCCGTAAGCTCCCCAAGGAGGTCCTCCAAACAGCCCCTTGCCCTGGGCTGTTCCG
TCTTCCTGTTTGCCCCCCTCTTCCAACGCTTATCCCTCCTGACCATACTAGCCGAACATCCAGC
GGGAGACCCTTAGGGACCACCCTGCTTGCCCTCAGGCCCTTCTGAGTGCCCATCCAGGGCTGGG
GCTACTTAGCTCCTTTCCATTCTTTGGGGGCAGCCTCGACTCCCAGGGCTGCTTGGCTTGCCTA
GTCCACTAAGGGTGGGGAGTTCCTGAGGTAGTGCGATTCTGCAGCTTATGGCCATGGCGTTGGT
TACCTGGGGCTCCTGGCTGGGGCCTGTCCACCGTAGCCACCTCCCCTCTTGGAGGCTCAGAGCC
TGTTTTCATCTCTCCAGCTCCTAATAGCCTCAGAGTCCATCAAGCCCCCAGGCAGGGTGTGCCG
TATGTGATGAAAGGATCCACTCTCAGGGAAAGCACGGCCGTGGCTTCCCCACTGCCCCAGGATA
TGGAGGAGGAGCAGGCGCCCGTTGGCTCAGAGCCAGGTGACCCACGAGCCAAACCCCCTGTCAA
GCCCAAGCCCCGGAGCTTGCCCAGCAAGCCAGCTCTGCCTGCCAAACCCAGCCTTCTGGTGCCT
GTTGGGCCTCGTCCTCCTCGGGGTCCCCTGGCTGAGCTGCCTTCTGCCCGGAAGATGAATATGC
TGGCAGGACCTCAGCCCTATGGGGTCAGCAAGCGTCCACTCCCATTTACATCAAAGCCTCCAGC
TGAGGCAACTGCTGGGGGAGAAGTTACCCAAGAGTCCGGGAAAGAGGACTTGCCCCCTTTAACA
CCGCCAGCTCGGTGCGCTGCTCTGGGGGGTGTGCGGAAGGCCCCTGCCCCCTTCCGTCCCTCCT
CTGAGCGGTTTGCAGCCTGTACAGTAGAAGAAATTTTGGCGAAGATGGAGCAGCCTCGGAAAGA
GATCCCTGCTAGCCCTGACCGACTCTGGGGGTCCCGCCTCACCTTTAACCACGATGGAAGCTCT
CGATATGGCCCTAGGACCTTCGGTGCCTCCTGCCCCAGAGAGGAGGATAATAAGACCCCTGCCA
AAGCATCATCCCAGGAGAGGACAGCAGAGACTCCCGCAGAGTGCCAGGAAGAGTGTAGCAAGAC
TCCTGAGGCGAGGATCCTCACTTCCAGCCTAGCACTGAACGGGGACCTGGCTAAACTGGCTAGC
TCTGGACCACCTTCTGAGGTTTCCAAGACCTGGGTCACCTCAAGTGCAGACCCTGTTTCAGAGC
ATGGCGTCTCTACCAGCCCAGTCCTCCTGGCTAAAGTCTCTGTCCCAGCCTCCGAGTCTCCCCA
GCTTTCAAGCCAACAGAGTTCTCCCTGCCAATCTCAACTTTCAGAAACCCAGAGTCCTGCAGCT
TCTGAGGGTTCGATCTACATCCCTGTGACTCCAGCCTCCCCTAGTGTAGCCTTGCCTGAGGAGC
CTCCCTGCCATTCCCCTAGCTCAGAGCTACCTGCTGTGGCAGCCCCAGAAACCCTCAGACCCAA
CAGCTCTCCTGTGGAGACAGTCTCAGGGCACCACAGCCCAGAGCAGCCCCCAGTCCCCTTGCCT
CAACCCTTGATTGAGGGGGCTGAGTTGCCGGACATTACACGAACGTTCCCGTGTGGCGAGGAGG
CAGCAGCCAGGGGTCACACAGAATCCCGTCCAAGCAGCCTGGCTCAGCGCCGTTTCTCAGAAGG
CGTACTTCGGCCACCTAGCCAGGACCAAGAGAAGCTGGGAGGCTCACTGGCTGCTCTGCCCCAA
GATCAAGGGAGCCAGTCTGCTCTAGATCGTCCCTTTGGGAGTGGGACAGAGTCTAACTGGAGCT
TGTCACAGTCATTTGAGTGGACCTTCCCCACAAGGCCCTCAGGTCTGGGTGTGTGTCGGCTGGA
CTCCCCACCTCCATCCCCCATTACAGAAGCCAGCGAGGCTGCAGAGGCTGCAGAAGCTGGCAAC
TGGGCTGCATCGGGCAGGGAAGAGGGAGTGTCCCAGCTGGGACTGGGAACCCCATCAGCTCCAG
AGAGCCCAGGAAAGCCTGTTTCTGGGGTTCAGGGAAATGATCCAGGCATATCTCTAACCCAGAG
AGATGGTGGAGATAGTCAGCCTCAGTCCCCAGCTGTTCTATCCCCGACAGTTGAGGGCCCACCG
GGAATACCCTTACTTCAGGCAAAGGAGAACTATGAGGACCAGGAGCCATTGGCGGGGCAGGAGT
CCCCCATTACTTTGGCCACTAGGGAGGCAGCCCTACCTGTGCTAGAGCCAGTACTGGGACAGCA
GCAGCCAACACCCTCTGACCAGCCCTGCATCCTCTTTGTGGATGTACCTGATCCCGGGCAGGCA
TTGTCCACTGAGGAGGAGGTGGTCACCCTAGGCTGGGCAGAGACTACCCAGCCCGTGACAGAGG
CTCAGGAACCCGGTAGCGTGTCTCCTGGGCCTACAGGCCCTGAAAGCAGTTCTCGATGGCTGGA
TGATCTCTTGGCATCACCACCACCCAACTCAGGAGGCGCACGGCGGGCGGCTGGAGCCGAGCTA
AAGGATTTACAGTCACCAAGCACCTGCTCTGAGGGACTCCTTGGCTGGGCCCAGAAAGACCTGC
AGAGTGAGTTTGGGGTTGTAGCAGACTCACACTCCAGCGGTTTTGGTCCTTCCAGCTGGTCCCA
AGATGCTTCTCAGACCTACAGCCTTGGAGGCAGGAGCCCCGGAGGAGACCCTGGTCTTGGGAAG
AGAGACTGGAGCAGCAAGTGTGGGCAAGGATCTGGGGAGGGGAGCACTAGGGAGTGGGCCAGCA
GATGCAGCCTTGGCCAAGAGGTGATGGGAATCGGCAGCAGCCAAGATGAGTGTGAAGTGCCTGT
CCATGAGCGGGCAGTGGGAAAGCCGGCCCAGCTTGGGCTTGGCCCTCAGGGCCTGGAGGCTGAT
GCACAACAATGGGAGTTCGGGAAGAGGGATTCCCAGGACCCTTACTCCAGCCTTGACAAAGAGC
TCCAGGACCAGGAGTTCGGGAAGCGGGATTCCTTGGGTTCTTTCAGCATCCAGGATGCAAGCCT
TCAAGACTGGGAGTTTGGGAAGAGAGCGTCGGTGAGCACCAACCAGAATACAGATGAAAACGAT
CAAGAGCTGCGGATGAAGAACCTCTCTGGTGGCTATAGTAGCCAGGATGCTGAAGAGCAGGATC
GGGAGTTTGAGAAGCGAGATTCTGTACTAGACACCCATGGCAGCAGGGCCATAGCCCAGCAGGA
CCAGGAGTTTGGGAAGAGTGCTTGGTTAAAGGATTACAGTGACAGCAGCTTAAGGGCGCTCAGC
TCACAGGAAAGAGGATTCGAAACACGATCTCTGAGCTCTGGGTTCAGCCCTGAAGAAGCTCAGC
AGCAGGACGAGGAGTTTGAGAAGAAGACTCCAGTTGGCGAAGACAGGTTTCGTGAGGCCGGCAG
GGATGTGGGTCAACTGGAGGAAGGAGCATCTGGGGGCCTGCTGAACCCCAGTACACCTAATTTG
CAAGATGGAGCTGCCAGGCCGAAAGAAGAGGGCAACTGGCAAGATGGTGCCCCCAGCCAGGAGA
TCACAAGGCTGCAGGGGAGAATGCAGGCAGAAAGTCAGAACCCTACCAACGCGGAGTTGGAAGA
CAGAGCGAAAGAGCAGCGAGGCTGGGCTGGGGACTTCAGCCTTGGCGTTACAGCCCAGTCAGAG
GCAGCATTTAGTCCAGGGCGGCAAGACTGGAGCCGGCACTTGTGCACGGAGGCCTCTGAGGGTG
GCTATCAGTTTGGCATCATTGGCAACGACAGAGTAAGTGGTGCTGGCCTCAGCCCTTCCAGGAA
GAGTGGACGTGGCCACTTTGTGCCTCCTGGAGAGACAGAGGCCGGGGCTGTGGACTGGACTGAC
CAGCTCGGTCTCAGGAACTTGGAAGTGTCTAGCTGTGTGAGTTCTGATGGCTCAAGTGAGGCTA
GAGAGAATGTTGTGGAAAAAATGGGCTGGTCAGACAGCCTGAGCTTGAACAGTGGAGATTCTGA
GGAGCCCAGGGGCATGGGAGTTGGAGAGAAGGACTGGACTTCCAATGTGGAGGCAAGGAACAGA
GATTTGCCAGGGCAGGGAGAGGTAGGAGGGCACAGCCAGGCCAGAGAGAGTGGTGTGGGGGAGC
CCGACTGGTCAGGGGTAGAGGCTGGAGAGTTCCTTAAGTCAAGAGAGCGTGGAGTTGGACAGGC
AGATTGGACACCTGATCTTGGATTGAGAAACATGGCCCCAGGGGCAGGCTGCAGCCCTGGAGAG
CCCAGGGAACTTGGGGTGGGTCAGGTAGACTGGGGTGACAATCTAGGCCTTAGGAACTTGGAGG
TGTCCTGTGACCTAGAGTCAGGAGGCTCTCGGGGCTGTGGAGTTGGGCAAATGGACTGGGCCCA
GGACTTGGGACTCCGGAACCTCAGGCTCTGTGGAGCCCCAAGTGAAGTTAGGGAGTGTGGGGTG
GGGAGAGTGGGCCCTGACCTAGAGCTAGACCCCAAGAGTAGTGGCAGTTTGTCCCCTGGTCTGG
AGACTGAGGACCCCTTGGAAGCCAGGGAGCTGGGGGTTGGTGAAACAAGTGGGCCAGAGACACA
GGGTGAAGACAGCTCATCACCTTCCTTTGAGACTCATTCTGAAGACACTGGAATGGATGCAGGA
GAAGCCCCCAGCTTGGGAGCCAGCCCCAGCAGGTGCCTGGCTCGCTCTCCACCTTCTGGCTCCC
AGAGCCTTCTGGAGGGGATCATGCCAGCCAGCGGCTCTAAGGGAGCTACTCAGAGGGAATCAGC
AGCTTCTGGCCTCAGGGTTCTGTTGGAGGAGGATGGCGTCCCCACAGGTGCTGGCCAAGGGGAG
CCCCAGGAGTCGAGCAGTGACCCTTTGCCTTCCTCGAGGCCTCAGCCTGATGGCGAAGCCAGCC
AGGTAGAAGAGGTGGATGGCACCTGGAGTCTTACAGGGGGGGCTAGGCAAGATGAGCAGGGGTC
AGCCCCGCCCCCCCGGCGGCCTCCCCGAGGACTTCTGCCCAGCTGCCCCAGTGAGGACTTCTCC
TTTATAGAGGACACTGAGATCCTTGATAGCGCCATGTATCGGAGTCGTGCCAACCTAGGGCGTA
AGCGGGGGCATCGGGCCCCAGCCATCCGACCTGGGGGTACTCTGGGCCTGTCAGAAACAGCAGA
CATGGATGCTCGGCTCTTCCAAGATTCAACTGAGCCAAGGGCCTCCCGGGTGCCATCTTCAGAT
GAGGAGGTAGTGGAGGAGCCTCAGAGCCGCCGGACACGGATGTCCTTAGGCACTAAAGGACTGA
AAGTCAACCTGTTTCCTGGCCTGAGCCCATCCGCCTTGAAGGCCAAGCTACGCTCCCGGAACCG
CTCAGCTGAGGAAGGGGAGGTGACAGAGAGCAAATCAAGCCAGAAAGAGTCTTCTGTCCAGCGC
TCTAAGTCCTGCAAGGTCCCAGGGTTAGGGAAGCCCCTTACATTACCCCCAAAGCCAGAAAAAT
CCTCAGGGTCAGAAGGATCATCGCCCAACTGGCTGCAAGCCCTGAAGCTAAAAAAGAAAAAGAT
CTGATCAGAGGCTGAGGTCCTTCCCATCTGGCAGTCTCAGGCAGTGCCATTCCTGTGGGGTCCC
CAAGTGAGGAGACAGCTGGAGCCCCACCAGGGCACAGACTGCAGCCTCCTTTCCCCTCCACTTC
TGCGGAGTGTCTGGGAGGCACATTTATGCACTTTGTATCACCGTCCCAACTTCTTGCACCCCTT
CCGCCCCAGCTGGACCCCGTCCCCAATGGTGGAAGGTCTTGTACCCCTCAGTCTTCCCTTCACC
CTCTTTGCTTCCATCTTCGACCTCCCTTGGGTTTTCTTTTGATACCAATTTATATCATTTTTAT
AAAAGCCTTTGATTTTTGTAATGGGTGGGGCCCCACCCCAACCCCACCCCAGGTCTCCCTCTGC
CCACTAGGTGCCCCACAGAGACCAATGACATTTTACCACTTGAAACAATGAATAAAGTTTTTTG
GGAATTGG

hide sequence

RefSeq Acc Id:

XM_006234486 ⟹ XP_006234548

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	90,542,006 - 90,566,720 (+)	NCBI
mRatBN7.2	3	70,135,335 - 70,160,071 (+)	NCBI
Rnor_6.0	3	72,458,520 - 72,483,206 (+)	NCBI
Rnor_5.0	3	78,969,203 - 78,994,278 (+)	NCBI

Sequence:

show sequence

CCCGGGGCTTGCACTGGCTCGGTCCCGTGGTGACGGTGGCGGCGGTGGCAGCAGCGGTCACTAG
CGTCGGGGTGTCTCGCTGAGTGAAGCCGGTCCCGGGGGAGCGCGCAGGGTGTGCCGTATGTGAT
GAAAGGATCCACTCTCAGGGAAAGCACGGCCGTGGCTTCCCCACTGCCCCAGGATATGGAGGAG
GAGCAGGCGCCCGTTGGCTCAGAGCCAGGTGACCCACGAGCCAAACCCCCTGTCAAGCCCAAGC
CCCGGAGCTTGCCCAGCAAGCCAGCTCTGCCTGCCAAACCCAGCCTTCTGGTGCCTGTTGGGCC
TCGTCCTCCTCGGGGTCCCCTGGCTGAGCTGCCTTCTGCCCGGAAGATGAATATGCTGGCAGGA
CCTCAGCCCTATGGGGTCAGCAAGCGTCCACTCCCATTTACATCAAAGCCTCCAGCTGAGGCAA
CTGCTGGGGGAGAAGTTACCCAAGAGTCCGGGAAAGAGGACTTGCCCCCTTTAACACCGCCAGC
TCGGTGCGCTGCTCTGGGGGGTGTGCGGAAGGCCCCTGCCCCCTTCCGTCCCTCCTCTGAGCGG
TTTGCAGCCTGTACAGTAGAAGAAATTTTGGCGAAGATGGAGCAGCCTCGGAAAGAGATCCCTG
CTAGCCCTGACCGACTCTGGGGGTCCCGCCTCACCTTTAACCACGATGGAAGCTCTCGATATGG
CCCTAGGACCTTCGGTGCCTCCTGCCCCAGAGAGGAGGATAATAAGACCCCTGCCAAAGCATCA
TCCCAGGAGAGGACAGCAGAGACTCCCGCAGAGTGCCAGGAAGAGTGTAGCAAGACTCCTGAGG
CGAGGATCCTCACTTCCAGCCTAGCACTGAACGGGGACCTGGCTAAACTGGCTAGCTCTGGACC
ACCTTCTGAGGTTTCCAAGACCTGGGTCACCTCAAGTGCAGACCCTGTTTCAGAGCATGGCGTC
TCTACCAGCCCAGTCCTCCTGGCTAAAGTCTCTGTCCCAGCCTCCGAGTCTCCCCAGCTTTCAA
GCCAACAGAGTTCTCCCTGCCAATCTCAACTTTCAGAAACCCAGAGTCCTGCAGCTTCTGAGGG
TTCGATCTACATCCCTGTGACTCCAGCCTCCCCTAGTGTAGCCTTGCCTGAGGAGCCTCCCTGC
CATTCCCCTAGCTCAGAGCTACCTGCTGTGGCAGCCCCAGAAACCCTCAGACCCAACAGCTCTC
CTGTGGAGACAGTCTCAGGGCACCACAGCCCAGAGCAGCCCCCAGTCCCCTTGCCTCAACCCTT
GATTGAGGGGGCTGAGTTGCCGGACATTACACGAACGTTCCCGTGTGGCGAGGAGGCAGCAGCC
AGGGGTCACACAGAATCCCGTCCAAGCAGCCTGGCTCAGCGCCGTTTCTCAGAAGGCGTACTTC
GGCCACCTAGCCAGGACCAAGAGAAGCTGGGAGGCTCACTGGCTGCTCTGCCCCAAGATCAAGG
GAGCCAGTCTGCTCTAGATCGTCCCTTTGGGAGTGGGACAGAGTCTAACTGGAGCTTGTCACAG
TCATTTGAGTGGACCTTCCCCACAAGGCCCTCAGGTCTGGGTGTGTGTCGGCTGGACTCCCCAC
CTCCATCCCCCATTACAGAAGCCAGCGAGGCTGCAGAGGCTGCAGAAGCTGGCAACTGGGCTGC
ATCGGGCAGGGAAGAGGGAGTGTCCCAGCTGGGACTGGGAACCCCATCAGCTCCAGAGAGCCCA
GGAAAGCCTGTTTCTGGGGTTCAGGGAAATGATCCAGGCATATCTCTAACCCAGAGAGATGGTG
GAGATAGTCAGCCTCAGTCCCCAGCTGTTCTATCCCCGACAGTTGAGGGCCCACCGGGAATACC
CTTACTTCAGGCAAAGGAGAACTATGAGGACCAGGAGCCATTGGCGGGGCAGGAGTCCCCCATT
ACTTTGGCCACTAGGGAGGCAGCCCTACCTGTGCTAGAGCCAGTACTGGGACAGCAGCAGCCAA
CACCCTCTGACCAGCCCTGCATCCTCTTTGTGGATGTACCTGATCCCGGGCAGGCATTGTCCAC
TGAGGAGGAGGTGGTCACCCTAGGCTGGGCAGAGACTACCCAGCCCGTGACAGAGGCTCAGGAA
CCCGGTAGCGTGTCTCCTGGGCCTACAGGCCCTGAAAGCAGTTCTCGATGGCTGGATGATCTCT
TGGCATCACCACCACCCAACTCAGGAGGCGCACGGCGGGCGGCTGGAGCCGAGCTAAAGGATTT
ACAGTCACCAAGCACCTGCTCTGAGGGACTCCTTGGCTGGGCCCAGAAAGACCTGCAGAGTGAG
TTTGGGGTTGTAGCAGACTCACACTCCAGCGGTTTTGGTCCTTCCAGCTGGTCCCAAGATGCTT
CTCAGACCTACAGCCTTGGAGGCAGGAGCCCCGGAGGAGACCCTGGTCTTGGGAAGAGAGACTG
GAGCAGCAAGTGTGGGCAAGGATCTGGGGAGGGGAGCACTAGGGAGTGGGCCAGCAGATGCAGC
CTTGGCCAAGAGGTGATGGGAATCGGCAGCAGCCAAGATGAGTGTGAAGTGCCTGTCCATGAGC
GGGCAGTGGGAAAGCCGGCCCAGCTTGGGCTTGGCCCTCAGGGCCTGGAGGCTGATGCACAACA
ATGGGAGTTCGGGAAGAGGGATTCCCAGGACCCTTACTCCAGCCTTGACAAAGAGCTCCAGGAC
CAGGAGTTCGGGAAGCGGGATTCCTTGGGTTCTTTCAGCATCCAGGATGCAAGCCTTCAAGACT
GGGAGTTTGGGAAGAGAGCGTCGGTGAGCACCAACCAGAATACAGATGAAAACGATCAAGAGCT
GCGGATGAAGAACCTCTCTGGTGGCTATAGTAGCCAGGATGCTGAAGAGCAGGATCGGGAGTTT
GAGAAGCGAGATTCTGTACTAGACACCCATGGCAGCAGGGCCATAGCCCAGCAGGACCAGGAGT
TTGGGAAGAGTGCTTGGTTAAAGGATTACAGTGACAGCAGCTTAAGGGCGCTCAGCTCACAGGA
AAGAGGATTCGAAACACGATCTCTGAGCTCTGGGTTCAGCCCTGAAGAAGCTCAGCAGCAGGAC
GAGGAGTTTGAGAAGAAGACTCCAGTTGGCGAAGACAGGTTTCGTGAGGCCGGCAGGGATGTGG
GTCAACTGGAGGAAGGAGCATCTGGGGGCCTGCTGAACCCCAGTACACCTAATTTGCAAGATGG
AGCTGCCAGGCCGAAAGAAGAGGGCAACTGGCAAGATGGTGCCCCCAGCCAGGAGATCACAAGG
CTGCAGGGGAGAATGCAGGCAGAAAGTCAGAACCCTACCAACGCGGAGTTGGAAGACAGAGCGA
AAGAGCAGCGAGGCTGGGCTGGGGACTTCAGCCTTGGCGTTACAGCCCAGTCAGAGGCAGCATT
TAGTCCAGGGCGGCAAGACTGGAGCCGGCACTTGTGCACGGAGGCCTCTGAGGGTGGCTATCAG
TTTGGCATCATTGGCAACGACAGAGTAAGTGGTGCTGGCCTCAGCCCTTCCAGGAAGAGTGGAC
GTGGCCACTTTGTGCCTCCTGGAGAGACAGAGGCCGGGGCTGTGGACTGGACTGACCAGCTCGG
TCTCAGGAACTTGGAAGTGTCTAGCTGTGTGAGTTCTGATGGCTCAAGTGAGGCTAGAGAGAAT
GTTGTGGAAAAAATGGGCTGGTCAGACAGCCTGAGCTTGAACAGTGGAGATTCTGAGGAGCCCA
GGGGCATGGGAGTTGGAGAGAAGGACTGGACTTCCAATGTGGAGGCAAGGAACAGAGATTTGCC
AGGGCAGGGAGAGGTAGGAGGGCACAGCCAGGCCAGAGAGAGTGGTGTGGGGGAGCCCGACTGG
TCAGGGGTAGAGGCTGGAGAGTTCCTTAAGTCAAGAGAGCGTGGAGTTGGACAGGCAGATTGGA
CACCTGATCTTGGATTGAGAAACATGGCCCCAGGGGCAGGCTGCAGCCCTGGAGAGCCCAGGGA
ACTTGGGGTGGGTCAGGTAGACTGGGGTGACAATCTAGGCCTTAGGAACTTGGAGGTGTCCTGT
GACCTAGAGTCAGGAGGCTCTCGGGGCTGTGGAGTTGGGCAAATGGACTGGGCCCAGGACTTGG
GACTCCGGAACCTCAGGCTCTGTGGAGCCCCAAGTGAAGTTAGGGAGTGTGGGGTGGGGAGAGT
GGGCCCTGACCTAGAGCTAGACCCCAAGAGTAGTGGCAGTTTGTCCCCTGGTCTGGAGACTGAG
GACCCCTTGGAAGCCAGGGAGCTGGGGGTTGGTGAAACAAGTGGGCCAGAGACACAGGGTGAAG
ACAGCTCATCACCTTCCTTTGAGACTCATTCTGAAGACACTGGAATGGATGCAGGAGAAGCCCC
CAGCTTGGGAGCCAGCCCCAGCAGGTGCCTGGCTCGCTCTCCACCTTCTGGCTCCCAGAGCCTT
CTGGAGGGGATCATGCCAGCCAGCGGCTCTAAGGGAGCTACTCAGAGGGAATCAGCAGCTTCTG
GCCTCAGGGTTCTGTTGGAGGAGGATGGCGTCCCCACAGGTGCTGGCCAAGGGGAGCCCCAGGA
GTCGAGCAGTGACCCTTTGCCTTCCTCGAGGCCTCAGCCTGATGGCGAAGCCAGCCAGGTAGAA
GAGGTGGATGGCACCTGGAGTCTTACAGGGGGGGCTAGGCAAGATGAGCAGGGGTCAGCCCCGC
CCCCCCGGCGGCCTCCCCGAGGACTTCTGCCCAGCTGCCCCAGTGAGGACTTCTCCTTTATAGA
GGACACTGAGATCCTTGATAGCGCCATGTATCGGAGTCGTGCCAACCTAGGGCGTAAGCGGGGG
CATCGGGCCCCAGCCATCCGACCTGGGGGTACTCTGGGCCTGTCAGAAACAGCAGACATGGATG
CTCGGCTCTTCCAAGATTCAACTGAGCCAAGGGCCTCCCGGGTGCCATCTTCAGATGAGGAGGT
AGTGGAGGAGCCTCAGAGCCGCCGGACACGGATGTCCTTAGGCACTAAAGGACTGAAAGTCAAC
CTGTTTCCTGGCCTGAGCCCATCCGCCTTGAAGGCCAAGCTACGCTCCCGGAACCGCTCAGCTG
AGGAAGGGGAGGTGACAGAGAGCAAATCAAGCCAGAAAGAGTCTTCTGTCCAGCGCTCTAAGTC
CTGCAAGGTCCCAGGGTTAGGGAAGCCCCTTACATTACCCCCAAAGCCAGAAAAATCCTCAGGG
TCAGAAGGATCATCGCCCAACTGGCTGCAAGCCCTGAAGCTAAAAAAGAAAAAGATCTGATCAG
AGGCTGAGGTCCTTCCCATCTGGCAGTCTCAGGCAGTGCCATTCCTGTGGGGTCCCCAAGTGAG
GAGACAGCTGGAGCCCCACCAGGGCACAGACTGCAGCCTCCTTTCCCCTCCACTTCTGCGGAGT
GTCTGGGAGGCACATTTATGCACTTTGTATCACCGTCCCAACTTCTTGCACCCCTTCCGCCCCA
GCTGGACCCCGTCCCCAATGGTGGAAGGTCTTGTACCCCTCAGTCTTCCCTTCACCCTCTTTGC
TTCCATCTTCGACCTCCCTTGGGTTTTCTTTTGATACCAATTTATATCATTTTTATAAAAGCCT
TTGATTTTTGTAATGGGTGGGGCCCCACCCCAACCCCACCCCAGGTCTCCCTCTGCCCACTAGG
TGCCCCACAGAGACCAATGACATTTTACCACTTGAAACAATGAATAAAGTTTTTTGGGAATTGG

hide sequence

RefSeq Acc Id:

XM_017592170 ⟹ XP_017447659

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	90,542,022 - 90,566,720 (+)	NCBI
mRatBN7.2	3	70,135,380 - 70,160,071 (+)	NCBI
Rnor_6.0	3	72,458,535 - 72,483,206 (+)	NCBI

Sequence:

show sequence

GGCTCGGTCCCGTGGTGACGGTGGCGGCGGTGGCAGCAGCGGTCACTAGCGTCGGGGTGTCTCG
CTGAGTGAAGCCGGTCCCGGGGGAGCGCGGTGTGCCGTATGTGATGAAAGGATCCACTCTCAGG
GAAAGCACGGCCGTGGCTTCCCCACTGCCCCAGGATATGGAGGAGGAGCAGGCGCCCGTTGGCT
CAGAGCCAGGTGACCCACGAGCCAAACCCCCTGTCAAGCCCAAGCCCCGGAGCTTGCCCAGCAA
GCCAGCTCTGCCTGCCAAACCCAGCCTTCTGGTGCCTGTTGGGCCTCGTCCTCCTCGGGGTCCC
CTGGCTGAGCTGCCTTCTGCCCGGAAGATGAATATGCTGGCAGGACCTCAGCCCTATGGGGTCA
GCAAGCGTCCACTCCCATTTACATCAAAGCCTCCAGCTGAGGCAACTGCTGGGGGAGAAGTTAC
CCAAGAGTCCGGGAAAGAGGACTTGCCCCCTTTAACACCGCCAGCTCGGTGCGCTGCTCTGGGG
GGTGTGCGGAAGGCCCCTGCCCCCTTCCGTCCCTCCTCTGAGCGGTTTGCAGCCTGTACAGTAG
AAGAAATTTTGGCGAAGATGGAGCAGCCTCGGAAAGAGATCCCTGCTAGCCCTGACCGACTCTG
GGGGTCCCGCCTCACCTTTAACCACGATGGAAGCTCTCGATATGGCCCTAGGACCTTCGGTGCC
TCCTGCCCCAGAGAGGAGGATAATAAGACCCCTGCCAAAGCATCATCCCAGGAGAGGACAGCAG
AGACTCCCGCAGAGTGCCAGGAAGAGTGTAGCAAGACTCCTGAGGCGAGGATCCTCACTTCCAG
CCTAGCACTGAACGGGGACCTGGCTAAACTGGCTAGCTCTGGACCACCTTCTGAGGTTTCCAAG
ACCTGGGTCACCTCAAGTGCAGACCCTGTTTCAGAGCATGGCGTCTCTACCAGCCCAGTCCTCC
TGGCTAAAGTCTCTGTCCCAGCCTCCGAGTCTCCCCAGCTTTCAAGCCAACAGAGTTCTCCCTG
CCAATCTCAACTTTCAGAAACCCAGAGTCCTGCAGCTTCTGAGGGTTCGATCTACATCCCTGTG
ACTCCAGCCTCCCCTAGTGTAGCCTTGCCTGAGGAGCCTCCCTGCCATTCCCCTAGCTCAGAGC
TACCTGCTGTGGCAGCCCCAGAAACCCTCAGACCCAACAGCTCTCCTGTGGAGACAGTCTCAGG
GCACCACAGCCCAGAGCAGCCCCCAGTCCCCTTGCCTCAACCCTTGATTGAGGGGGCTGAGTTG
CCGGACATTACACGAACGTTCCCGTGTGGCGAGGAGGCAGCAGCCAGGGGTCACACAGAATCCC
GTCCAAGCAGCCTGGCTCAGCGCCGTTTCTCAGAAGGCGTACTTCGGCCACCTAGCCAGGACCA
AGAGAAGCTGGGAGGCTCACTGGCTGCTCTGCCCCAAGATCAAGGGAGCCAGTCTGCTCTAGAT
CGTCCCTTTGGGAGTGGGACAGAGTCTAACTGGAGCTTGTCACAGTCATTTGAGTGGACCTTCC
CCACAAGGCCCTCAGGTCTGGGTGTGTGTCGGCTGGACTCCCCACCTCCATCCCCCATTACAGA
AGCCAGCGAGGCTGCAGAGGCTGCAGAAGCTGGCAACTGGGCTGCATCGGGCAGGGAAGAGGGA
GTGTCCCAGCTGGGACTGGGAACCCCATCAGCTCCAGAGAGCCCAGGAAAGCCTGTTTCTGGGG
TTCAGGGAAATGATCCAGGCATATCTCTAACCCAGAGAGATGGTGGAGATAGTCAGCCTCAGTC
CCCAGCTGTTCTATCCCCGACAGTTGAGGGCCCACCGGGAATACCCTTACTTCAGGCAAAGGAG
AACTATGAGGACCAGGAGCCATTGGCGGGGCAGGAGTCCCCCATTACTTTGGCCACTAGGGAGG
CAGCCCTACCTGTGCTAGAGCCAGTACTGGGACAGCAGCAGCCAACACCCTCTGACCAGCCCTG
CATCCTCTTTGTGGATGTACCTGATCCCGGGCAGGCATTGTCCACTGAGGAGGAGGTGGTCACC
CTAGGCTGGGCAGAGACTACCCAGCCCGTGACAGAGGCTCAGGAACCCGGTAGCGTGTCTCCTG
GGCCTACAGGCCCTGAAAGCAGTTCTCGATGGCTGGATGATCTCTTGGCATCACCACCACCCAA
CTCAGGAGGCGCACGGCGGGCGGCTGGAGCCGAGCTAAAGGATTTACAGTCACCAAGCACCTGC
TCTGAGGGACTCCTTGGCTGGGCCCAGAAAGACCTGCAGAGTGAGTTTGGGGTTGTAGCAGACT
CACACTCCAGCGGTTTTGGTCCTTCCAGCTGGTCCCAAGATGCTTCTCAGACCTACAGCCTTGG
AGGCAGGAGCCCCGGAGGAGACCCTGGTCTTGGGAAGAGAGACTGGAGCAGCAAGTGTGGGCAA
GGATCTGGGGAGGGGAGCACTAGGGAGTGGGCCAGCAGATGCAGCCTTGGCCAAGAGGTGATGG
GAATCGGCAGCAGCCAAGATGAGTGTGAAGTGCCTGTCCATGAGCGGGCAGTGGGAAAGCCGGC
CCAGCTTGGGCTTGGCCCTCAGGGCCTGGAGGCTGATGCACAACAATGGGAGTTCGGGAAGAGG
GATTCCCAGGACCCTTACTCCAGCCTTGACAAAGAGCTCCAGGACCAGGAGTTCGGGAAGCGGG
ATTCCTTGGGTTCTTTCAGCATCCAGGATGCAAGCCTTCAAGACTGGGAGTTTGGGAAGAGAGC
GTCGGTGAGCACCAACCAGAATACAGATGAAAACGATCAAGAGCTGCGGATGAAGAACCTCTCT
GGTGGCTATAGTAGCCAGGATGCTGAAGAGCAGGATCGGGAGTTTGAGAAGCGAGATTCTGTAC
TAGACACCCATGGCAGCAGGGCCATAGCCCAGCAGGACCAGGAGTTTGGGAAGAGTGCTTGGTT
AAAGGATTACAGTGACAGCAGCTTAAGGGCGCTCAGCTCACAGGAAAGAGGATTCGAAACACGA
TCTCTGAGCTCTGGGTTCAGCCCTGAAGAAGCTCAGCAGCAGGACGAGGAGTTTGAGAAGAAGA
CTCCAGTTGGCGAAGACAGGTTTCGTGAGGCCGGCAGGGATGTGGGTCAACTGGAGGAAGGAGC
ATCTGGGGGCCTGCTGAACCCCAGTACACCTAATTTGCAAGATGGAGCTGCCAGGCCGAAAGAA
GAGGGCAACTGGCAAGATGGTGCCCCCAGCCAGGAGATCACAAGGCTGCAGGGGAGAATGCAGG
CAGAAAGTCAGAACCCTACCAACGCGGAGTTGGAAGACAGAGCGAAAGAGCAGCGAGGCTGGGC
TGGGGACTTCAGCCTTGGCGTTACAGCCCAGTCAGAGGCAGCATTTAGTCCAGGGCGGCAAGAC
TGGAGCCGGCACTTGTGCACGGAGGCCTCTGAGGGTGGCTATCAGTTTGGCATCATTGGCAACG
ACAGAGTAAGTGGTGCTGGCCTCAGCCCTTCCAGGAAGAGTGGACGTGGCCACTTTGTGCCTCC
TGGAGAGACAGAGGCCGGGGCTGTGGACTGGACTGACCAGCTCGGTCTCAGGAACTTGGAAGTG
TCTAGCTGTGTGAGTTCTGATGGCTCAAGTGAGGCTAGAGAGAATGTTGTGGAAAAAATGGGCT
GGTCAGACAGCCTGAGCTTGAACAGTGGAGATTCTGAGGAGCCCAGGGGCATGGGAGTTGGAGA
GAAGGACTGGACTTCCAATGTGGAGGCAAGGAACAGAGATTTGCCAGGGCAGGGAGAGGTAGGA
GGGCACAGCCAGGCCAGAGAGAGTGGTGTGGGGGAGCCCGACTGGTCAGGGGTAGAGGCTGGAG
AGTTCCTTAAGTCAAGAGAGCGTGGAGTTGGACAGGCAGATTGGACACCTGATCTTGGATTGAG
AAACATGGCCCCAGGGGCAGGCTGCAGCCCTGGAGAGCCCAGGGAACTTGGGGTGGGTCAGGTA
GACTGGGGTGACAATCTAGGCCTTAGGAACTTGGAGGTGTCCTGTGACCTAGAGTCAGGAGGCT
CTCGGGGCTGTGGAGTTGGGCAAATGGACTGGGCCCAGGACTTGGGACTCCGGAACCTCAGGCT
CTGTGGAGCCCCAAGTGAAGTTAGGGAGTGTGGGGTGGGGAGAGTGGGCCCTGACCTAGAGCTA
GACCCCAAGAGTAGTGGCAGTTTGTCCCCTGGTCTGGAGACTGAGGACCCCTTGGAAGCCAGGG
AGCTGGGGGTTGGTGAAACAAGTGGGCCAGAGACACAGGGTGAAGACAGCTCATCACCTTCCTT
TGAGACTCATTCTGAAGACACTGGAATGGATGCAGGAGAAGCCCCCAGCTTGGGAGCCAGCCCC
AGCAGGTGCCTGGCTCGCTCTCCACCTTCTGGCTCCCAGAGCCTTCTGGAGGGGATCATGCCAG
CCAGCGGCTCTAAGGGAGCTACTCAGAGGGAATCAGCAGCTTCTGGCCTCAGGGTTCTGTTGGA
GGAGGATGGCGTCCCCACAGGTGCTGGCCAAGGGGAGCCCCAGGAGTCGAGCAGTGACCCTTTG
CCTTCCTCGAGGCCTCAGCCTGATGGCGAAGCCAGCCAGGTAGAAGAGGTGGATGGCACCTGGA
GTCTTACAGGGGGGGCTAGGCAAGATGAGCAGGGGTCAGCCCCGCCCCCCCGGCGGCCTCCCCG
AGGACTTCTGCCCAGCTGCCCCAGTGAGGACTTCTCCTTTATAGAGGACACTGAGATCCTTGAT
AGCGCCATGTATCGGAGTCGTGCCAACCTAGGGCGTAAGCGGGGGCATCGGGCCCCAGCCATCC
GACCTGGGGGTACTCTGGGCCTGTCAGAAACAGCAGACATGGATGCTCGGCTCTTCCAAGATTC
AACTGAGCCAAGGGCCTCCCGGGTGCCATCTTCAGATGAGGAGGTAGTGGAGGAGCCTCAGAGC
CGCCGGACACGGATGTCCTTAGGCACTAAAGGACTGAAAGTCAACCTGTTTCCTGGCCTGAGCC
CATCCGCCTTGAAGGCCAAGCTACGCTCCCGGAACCGCTCAGCTGAGGAAGGGGAGGTGACAGA
GAGCAAATCAAGCCAGAAAGAGTCTTCTGTCCAGCGCTCTAAGTCCTGCAAGGTCCCAGGGTTA
GGGAAGCCCCTTACATTACCCCCAAAGCCAGAAAAATCCTCAGGGTCAGAAGGATCATCGCCCA
ACTGGCTGCAAGCCCTGAAGCTAAAAAAGAAAAAGATCTGATCAGAGGCTGAGGTCCTTCCCAT
CTGGCAGTCTCAGGCAGTGCCATTCCTGTGGGGTCCCCAAGTGAGGAGACAGCTGGAGCCCCAC
CAGGGCACAGACTGCAGCCTCCTTTCCCCTCCACTTCTGCGGAGTGTCTGGGAGGCACATTTAT
GCACTTTGTATCACCGTCCCAACTTCTTGCACCCCTTCCGCCCCAGCTGGACCCCGTCCCCAAT
GGTGGAAGGTCTTGTACCCCTCAGTCTTCCCTTCACCCTCTTTGCTTCCATCTTCGACCTCCCT
TGGGTTTTCTTTTGATACCAATTTATATCATTTTTATAAAAGCCTTTGATTTTTGTAATGGGTG
GGGCCCCACCCCAACCCCACCCCAGGTCTCCCTCTGCCCACTAGGTGCCCCACAGAGACCAATG
ACATTTTACCACTTGAAACAATGAATAAAGTTTTTTGGGAATTGG

hide sequence

RefSeq Acc Id:

XM_039106449 ⟹ XP_038962377

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	90,553,343 - 90,566,720 (+)	NCBI
mRatBN7.2	3	70,146,686 - 70,160,071 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001416791	(Get FASTA)	NCBI Sequence Viewer
	NP_001416792	(Get FASTA)	NCBI Sequence Viewer
	XP_006234546	(Get FASTA)	NCBI Sequence Viewer
	XP_006234547	(Get FASTA)	NCBI Sequence Viewer
	XP_006234548	(Get FASTA)	NCBI Sequence Viewer
	XP_017447659	(Get FASTA)	NCBI Sequence Viewer
	XP_038962377	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000012209
	ENSRNOP00000012209.4

RefSeq Acc Id:

XP_006234548 ⟸ XM_006234486

- Peptide Label:

isoform X1

- Sequence:

show sequence

MKGSTLRESTAVASPLPQDMEEEQAPVGSEPGDPRAKPPVKPKPRSLPSKPALPAKPSLLVPVG
PRPPRGPLAELPSARKMNMLAGPQPYGVSKRPLPFTSKPPAEATAGGEVTQESGKEDLPPLTPP
ARCAALGGVRKAPAPFRPSSERFAACTVEEILAKMEQPRKEIPASPDRLWGSRLTFNHDGSSRY
GPRTFGASCPREEDNKTPAKASSQERTAETPAECQEECSKTPEARILTSSLALNGDLAKLASSG
PPSEVSKTWVTSSADPVSEHGVSTSPVLLAKVSVPASESPQLSSQQSSPCQSQLSETQSPAASE
GSIYIPVTPASPSVALPEEPPCHSPSSELPAVAAPETLRPNSSPVETVSGHHSPEQPPVPLPQP
LIEGAELPDITRTFPCGEEAAARGHTESRPSSLAQRRFSEGVLRPPSQDQEKLGGSLAALPQDQ
GSQSALDRPFGSGTESNWSLSQSFEWTFPTRPSGLGVCRLDSPPPSPITEASEAAEAAEAGNWA
ASGREEGVSQLGLGTPSAPESPGKPVSGVQGNDPGISLTQRDGGDSQPQSPAVLSPTVEGPPGI
PLLQAKENYEDQEPLAGQESPITLATREAALPVLEPVLGQQQPTPSDQPCILFVDVPDPGQALS
TEEEVVTLGWAETTQPVTEAQEPGSVSPGPTGPESSSRWLDDLLASPPPNSGGARRAAGAELKD
LQSPSTCSEGLLGWAQKDLQSEFGVVADSHSSGFGPSSWSQDASQTYSLGGRSPGGDPGLGKRD
WSSKCGQGSGEGSTREWASRCSLGQEVMGIGSSQDECEVPVHERAVGKPAQLGLGPQGLEADAQ
QWEFGKRDSQDPYSSLDKELQDQEFGKRDSLGSFSIQDASLQDWEFGKRASVSTNQNTDENDQE
LRMKNLSGGYSSQDAEEQDREFEKRDSVLDTHGSRAIAQQDQEFGKSAWLKDYSDSSLRALSSQ
ERGFETRSLSSGFSPEEAQQQDEEFEKKTPVGEDRFREAGRDVGQLEEGASGGLLNPSTPNLQD
GAARPKEEGNWQDGAPSQEITRLQGRMQAESQNPTNAELEDRAKEQRGWAGDFSLGVTAQSEAA
FSPGRQDWSRHLCTEASEGGYQFGIIGNDRVSGAGLSPSRKSGRGHFVPPGETEAGAVDWTDQL
GLRNLEVSSCVSSDGSSEARENVVEKMGWSDSLSLNSGDSEEPRGMGVGEKDWTSNVEARNRDL
PGQGEVGGHSQARESGVGEPDWSGVEAGEFLKSRERGVGQADWTPDLGLRNMAPGAGCSPGEPR
ELGVGQVDWGDNLGLRNLEVSCDLESGGSRGCGVGQMDWAQDLGLRNLRLCGAPSEVRECGVGR
VGPDLELDPKSSGSLSPGLETEDPLEARELGVGETSGPETQGEDSSSPSFETHSEDTGMDAGEA
PSLGASPSRCLARSPPSGSQSLLEGIMPASGSKGATQRESAASGLRVLLEEDGVPTGAGQGEPQ
ESSSDPLPSSRPQPDGEASQVEEVDGTWSLTGGARQDEQGSAPPPRRPPRGLLPSCPSEDFSFI
EDTEILDSAMYRSRANLGRKRGHRAPAIRPGGTLGLSETADMDARLFQDSTEPRASRVPSSDEE
VVEEPQSRRTRMSLGTKGLKVNLFPGLSPSALKAKLRSRNRSAEEGEVTESKSSQKESSVQRSK
SCKVPGLGKPLTLPPKPEKSSGSEGSSPNWLQALKLKKKKI

hide sequence

RefSeq Acc Id:	XP_006234547 ⟸ XM_006234485
- Peptide Label:	isoform X1
- UniProtKB:	D3ZF26 (UniProtKB/TrEMBL)
- Sequence:	show sequence MKGSTLRESTAVASPLPQDMEEEQAPVGSEPGDPRAKPPVKPKPRSLPSKPALPAKPSLLVPVG PRPPRGPLAELPSARKMNMLAGPQPYGVSKRPLPFTSKPPAEATAGGEVTQESGKEDLPPLTPP ARCAALGGVRKAPAPFRPSSERFAACTVEEILAKMEQPRKEIPASPDRLWGSRLTFNHDGSSRY GPRTFGASCPREEDNKTPAKASSQERTAETPAECQEECSKTPEARILTSSLALNGDLAKLASSG PPSEVSKTWVTSSADPVSEHGVSTSPVLLAKVSVPASESPQLSSQQSSPCQSQLSETQSPAASE GSIYIPVTPASPSVALPEEPPCHSPSSELPAVAAPETLRPNSSPVETVSGHHSPEQPPVPLPQP LIEGAELPDITRTFPCGEEAAARGHTESRPSSLAQRRFSEGVLRPPSQDQEKLGGSLAALPQDQ GSQSALDRPFGSGTESNWSLSQSFEWTFPTRPSGLGVCRLDSPPPSPITEASEAAEAAEAGNWA ASGREEGVSQLGLGTPSAPESPGKPVSGVQGNDPGISLTQRDGGDSQPQSPAVLSPTVEGPPGI PLLQAKENYEDQEPLAGQESPITLATREAALPVLEPVLGQQQPTPSDQPCILFVDVPDPGQALS TEEEVVTLGWAETTQPVTEAQEPGSVSPGPTGPESSSRWLDDLLASPPPNSGGARRAAGAELKD LQSPSTCSEGLLGWAQKDLQSEFGVVADSHSSGFGPSSWSQDASQTYSLGGRSPGGDPGLGKRD WSSKCGQGSGEGSTREWASRCSLGQEVMGIGSSQDECEVPVHERAVGKPAQLGLGPQGLEADAQ QWEFGKRDSQDPYSSLDKELQDQEFGKRDSLGSFSIQDASLQDWEFGKRASVSTNQNTDENDQE LRMKNLSGGYSSQDAEEQDREFEKRDSVLDTHGSRAIAQQDQEFGKSAWLKDYSDSSLRALSSQ ERGFETRSLSSGFSPEEAQQQDEEFEKKTPVGEDRFREAGRDVGQLEEGASGGLLNPSTPNLQD GAARPKEEGNWQDGAPSQEITRLQGRMQAESQNPTNAELEDRAKEQRGWAGDFSLGVTAQSEAA FSPGRQDWSRHLCTEASEGGYQFGIIGNDRVSGAGLSPSRKSGRGHFVPPGETEAGAVDWTDQL GLRNLEVSSCVSSDGSSEARENVVEKMGWSDSLSLNSGDSEEPRGMGVGEKDWTSNVEARNRDL PGQGEVGGHSQARESGVGEPDWSGVEAGEFLKSRERGVGQADWTPDLGLRNMAPGAGCSPGEPR ELGVGQVDWGDNLGLRNLEVSCDLESGGSRGCGVGQMDWAQDLGLRNLRLCGAPSEVRECGVGR VGPDLELDPKSSGSLSPGLETEDPLEARELGVGETSGPETQGEDSSSPSFETHSEDTGMDAGEA PSLGASPSRCLARSPPSGSQSLLEGIMPASGSKGATQRESAASGLRVLLEEDGVPTGAGQGEPQ ESSSDPLPSSRPQPDGEASQVEEVDGTWSLTGGARQDEQGSAPPPRRPPRGLLPSCPSEDFSFI EDTEILDSAMYRSRANLGRKRGHRAPAIRPGGTLGLSETADMDARLFQDSTEPRASRVPSSDEE VVEEPQSRRTRMSLGTKGLKVNLFPGLSPSALKAKLRSRNRSAEEGEVTESKSSQKESSVQRSK SCKVPGLGKPLTLPPKPEKSSGSEGSSPNWLQALKLKKKKI hide sequence

RefSeq Acc Id:

XP_006234546 ⟸ XM_006234484

- Peptide Label:

isoform X1

- Sequence:

show sequence

MKGSTLRESTAVASPLPQDMEEEQAPVGSEPGDPRAKPPVKPKPRSLPSKPALPAKPSLLVPVG
PRPPRGPLAELPSARKMNMLAGPQPYGVSKRPLPFTSKPPAEATAGGEVTQESGKEDLPPLTPP
ARCAALGGVRKAPAPFRPSSERFAACTVEEILAKMEQPRKEIPASPDRLWGSRLTFNHDGSSRY
GPRTFGASCPREEDNKTPAKASSQERTAETPAECQEECSKTPEARILTSSLALNGDLAKLASSG
PPSEVSKTWVTSSADPVSEHGVSTSPVLLAKVSVPASESPQLSSQQSSPCQSQLSETQSPAASE
GSIYIPVTPASPSVALPEEPPCHSPSSELPAVAAPETLRPNSSPVETVSGHHSPEQPPVPLPQP
LIEGAELPDITRTFPCGEEAAARGHTESRPSSLAQRRFSEGVLRPPSQDQEKLGGSLAALPQDQ
GSQSALDRPFGSGTESNWSLSQSFEWTFPTRPSGLGVCRLDSPPPSPITEASEAAEAAEAGNWA
ASGREEGVSQLGLGTPSAPESPGKPVSGVQGNDPGISLTQRDGGDSQPQSPAVLSPTVEGPPGI
PLLQAKENYEDQEPLAGQESPITLATREAALPVLEPVLGQQQPTPSDQPCILFVDVPDPGQALS
TEEEVVTLGWAETTQPVTEAQEPGSVSPGPTGPESSSRWLDDLLASPPPNSGGARRAAGAELKD
LQSPSTCSEGLLGWAQKDLQSEFGVVADSHSSGFGPSSWSQDASQTYSLGGRSPGGDPGLGKRD
WSSKCGQGSGEGSTREWASRCSLGQEVMGIGSSQDECEVPVHERAVGKPAQLGLGPQGLEADAQ
QWEFGKRDSQDPYSSLDKELQDQEFGKRDSLGSFSIQDASLQDWEFGKRASVSTNQNTDENDQE
LRMKNLSGGYSSQDAEEQDREFEKRDSVLDTHGSRAIAQQDQEFGKSAWLKDYSDSSLRALSSQ
ERGFETRSLSSGFSPEEAQQQDEEFEKKTPVGEDRFREAGRDVGQLEEGASGGLLNPSTPNLQD
GAARPKEEGNWQDGAPSQEITRLQGRMQAESQNPTNAELEDRAKEQRGWAGDFSLGVTAQSEAA
FSPGRQDWSRHLCTEASEGGYQFGIIGNDRVSGAGLSPSRKSGRGHFVPPGETEAGAVDWTDQL
GLRNLEVSSCVSSDGSSEARENVVEKMGWSDSLSLNSGDSEEPRGMGVGEKDWTSNVEARNRDL
PGQGEVGGHSQARESGVGEPDWSGVEAGEFLKSRERGVGQADWTPDLGLRNMAPGAGCSPGEPR
ELGVGQVDWGDNLGLRNLEVSCDLESGGSRGCGVGQMDWAQDLGLRNLRLCGAPSEVRECGVGR
VGPDLELDPKSSGSLSPGLETEDPLEARELGVGETSGPETQGEDSSSPSFETHSEDTGMDAGEA
PSLGASPSRCLARSPPSGSQSLLEGIMPASGSKGATQRESAASGLRVLLEEDGVPTGAGQGEPQ
ESSSDPLPSSRPQPDGEASQVEEVDGTWSLTGGARQDEQGSAPPPRRPPRGLLPSCPSEDFSFI
EDTEILDSAMYRSRANLGRKRGHRAPAIRPGGTLGLSETADMDARLFQDSTEPRASRVPSSDEE
VVEEPQSRRTRMSLGTKGLKVNLFPGLSPSALKAKLRSRNRSAEEGEVTESKSSQKESSVQRSK
SCKVPGLGKPLTLPPKPEKSSGSEGSSPNWLQALKLKKKKI

hide sequence

RefSeq Acc Id:	XP_017447659 ⟸ XM_017592170
- Peptide Label:	isoform X1
- UniProtKB:	D3ZF26 (UniProtKB/TrEMBL)
- Sequence:	show sequence MKGSTLRESTAVASPLPQDMEEEQAPVGSEPGDPRAKPPVKPKPRSLPSKPALPAKPSLLVPVG PRPPRGPLAELPSARKMNMLAGPQPYGVSKRPLPFTSKPPAEATAGGEVTQESGKEDLPPLTPP ARCAALGGVRKAPAPFRPSSERFAACTVEEILAKMEQPRKEIPASPDRLWGSRLTFNHDGSSRY GPRTFGASCPREEDNKTPAKASSQERTAETPAECQEECSKTPEARILTSSLALNGDLAKLASSG PPSEVSKTWVTSSADPVSEHGVSTSPVLLAKVSVPASESPQLSSQQSSPCQSQLSETQSPAASE GSIYIPVTPASPSVALPEEPPCHSPSSELPAVAAPETLRPNSSPVETVSGHHSPEQPPVPLPQP LIEGAELPDITRTFPCGEEAAARGHTESRPSSLAQRRFSEGVLRPPSQDQEKLGGSLAALPQDQ GSQSALDRPFGSGTESNWSLSQSFEWTFPTRPSGLGVCRLDSPPPSPITEASEAAEAAEAGNWA ASGREEGVSQLGLGTPSAPESPGKPVSGVQGNDPGISLTQRDGGDSQPQSPAVLSPTVEGPPGI PLLQAKENYEDQEPLAGQESPITLATREAALPVLEPVLGQQQPTPSDQPCILFVDVPDPGQALS TEEEVVTLGWAETTQPVTEAQEPGSVSPGPTGPESSSRWLDDLLASPPPNSGGARRAAGAELKD LQSPSTCSEGLLGWAQKDLQSEFGVVADSHSSGFGPSSWSQDASQTYSLGGRSPGGDPGLGKRD WSSKCGQGSGEGSTREWASRCSLGQEVMGIGSSQDECEVPVHERAVGKPAQLGLGPQGLEADAQ QWEFGKRDSQDPYSSLDKELQDQEFGKRDSLGSFSIQDASLQDWEFGKRASVSTNQNTDENDQE LRMKNLSGGYSSQDAEEQDREFEKRDSVLDTHGSRAIAQQDQEFGKSAWLKDYSDSSLRALSSQ ERGFETRSLSSGFSPEEAQQQDEEFEKKTPVGEDRFREAGRDVGQLEEGASGGLLNPSTPNLQD GAARPKEEGNWQDGAPSQEITRLQGRMQAESQNPTNAELEDRAKEQRGWAGDFSLGVTAQSEAA FSPGRQDWSRHLCTEASEGGYQFGIIGNDRVSGAGLSPSRKSGRGHFVPPGETEAGAVDWTDQL GLRNLEVSSCVSSDGSSEARENVVEKMGWSDSLSLNSGDSEEPRGMGVGEKDWTSNVEARNRDL PGQGEVGGHSQARESGVGEPDWSGVEAGEFLKSRERGVGQADWTPDLGLRNMAPGAGCSPGEPR ELGVGQVDWGDNLGLRNLEVSCDLESGGSRGCGVGQMDWAQDLGLRNLRLCGAPSEVRECGVGR VGPDLELDPKSSGSLSPGLETEDPLEARELGVGETSGPETQGEDSSSPSFETHSEDTGMDAGEA PSLGASPSRCLARSPPSGSQSLLEGIMPASGSKGATQRESAASGLRVLLEEDGVPTGAGQGEPQ ESSSDPLPSSRPQPDGEASQVEEVDGTWSLTGGARQDEQGSAPPPRRPPRGLLPSCPSEDFSFI EDTEILDSAMYRSRANLGRKRGHRAPAIRPGGTLGLSETADMDARLFQDSTEPRASRVPSSDEE VVEEPQSRRTRMSLGTKGLKVNLFPGLSPSALKAKLRSRNRSAEEGEVTESKSSQKESSVQRSK SCKVPGLGKPLTLPPKPEKSSGSEGSSPNWLQALKLKKKKI hide sequence

Ensembl Acc Id:

ENSRNOP00000012209 ⟸ ENSRNOT00000012209

RefSeq Acc Id:	XP_038962377 ⟸ XM_039106449
- Peptide Label:	isoform X2
- UniProtKB:	A6HMT3 (UniProtKB/TrEMBL)

Protein Domains

Tankyrase 1-binding protein C-terminal

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-D3ZF26-F1-model_v2	AlphaFold	D3ZF26	1-1705	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13692195

Promoter ID:

EPDNEW_R2715

Type:

initiation region

Name:

Tnks1bp1_1

Description:

tankyrase 1 binding protein 1

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	3	72,460,978 - 72,461,038	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1312021	AgrOrtholog
BioCyc Gene	G2FUF-49138	BioCyc
Ensembl Genes	ENSRNOG00000009195	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000012209	ENTREZGENE
	ENSRNOT00000012209.9	UniProtKB/TrEMBL
InterPro	Tankyrase_bd_C	UniProtKB/TrEMBL
	TNKS1BP1-like	UniProtKB/TrEMBL
KEGG Report	rno:295707	UniProtKB/TrEMBL
NCBI Gene	295707	ENTREZGENE
PANTHER	182 KDA TANKYRASE-1-BINDING PROTEIN	UniProtKB/TrEMBL
	PTHR22042	UniProtKB/TrEMBL
Pfam	Tankyrase_bdg_C	UniProtKB/TrEMBL
PhenoGen	Tnks1bp1	PhenoGen
RatGTEx	ENSRNOG00000009195	RatGTEx
SMART	Tankyrase_bdg_C	UniProtKB/TrEMBL
UniProt	A6HMT3	ENTREZGENE, UniProtKB/TrEMBL
	D3ZF26	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2008-04-30	Tnks1bp1	tankyrase 1 binding protein 1	Tnks1bp1_predicted	tankyrase 1 binding protein 1 (predicted)	'predicted' is removed	2292626	APPROVED
2005-01-12	Tnks1bp1_predicted	tankyrase 1 binding protein 1 (predicted)			Symbol and Name status set to approved	70820	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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