Tmcc2 (transmembrane and coiled-coil domain family 2) - Rat Genome Database

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Gene: Tmcc2 (transmembrane and coiled-coil domain family 2) Rattus norvegicus
Analyze
Symbol: Tmcc2
Name: transmembrane and coiled-coil domain family 2
RGD ID: 1311960
Description: Predicted to be involved in amyloid precursor protein metabolic process. Predicted to be located in endoplasmic reticulum. Predicted to be active in endomembrane system. Orthologous to human TMCC2 (transmembrane and coiled-coil domain family 2); INTERACTS WITH 1,2-dimethylhydrazine; 2,3,7,8-tetrachlorodibenzodioxine; 3,7-dihydropurine-6-thione.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: LOC305095; RGD1311960; similar to RIKEN cDNA 1110063G11; transmembrane and coiled-coil domains 2; transmembrane and coiled-coil domains protein 2
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81346,346,177 - 46,383,862 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1346,346,177 - 46,383,862 (-)EnsemblGRCr8
mRatBN7.21343,794,029 - 43,831,716 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1343,794,029 - 43,831,716 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1346,401,030 - 46,438,715 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01347,689,170 - 47,726,853 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01344,950,074 - 44,987,411 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01349,132,685 - 49,169,771 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1349,132,667 - 49,169,918 (-)Ensemblrn6Rnor6.0
Rnor_5.01354,201,418 - 54,238,775 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41345,246,328 - 45,283,883 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1344,128,734 - 44,166,110 (-)NCBICelera
RGSC_v3.11345,261,566 - 45,297,926 (-)NCBI
Cytogenetic Map13q13NCBI
JBrowse:




Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:21593558   PMID:25931508  


Genomics

Comparative Map Data
Tmcc2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81346,346,177 - 46,383,862 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1346,346,177 - 46,383,862 (-)EnsemblGRCr8
mRatBN7.21343,794,029 - 43,831,716 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1343,794,029 - 43,831,716 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1346,401,030 - 46,438,715 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01347,689,170 - 47,726,853 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01344,950,074 - 44,987,411 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01349,132,685 - 49,169,771 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1349,132,667 - 49,169,918 (-)Ensemblrn6Rnor6.0
Rnor_5.01354,201,418 - 54,238,775 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41345,246,328 - 45,283,883 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1344,128,734 - 44,166,110 (-)NCBICelera
RGSC_v3.11345,261,566 - 45,297,926 (-)NCBI
Cytogenetic Map13q13NCBI
TMCC2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381205,227,946 - 205,273,343 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1205,227,912 - 205,285,632 (+)Ensemblhg38GRCh38
GRCh371205,197,074 - 205,242,471 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361203,463,714 - 203,509,093 (+)NCBIBuild 36Build 36hg18NCBI36
Build 341201,928,747 - 201,974,127NCBI
Celera1178,332,120 - 178,377,550 (+)NCBICelera
Cytogenetic Map1q32.1NCBI
HuRef1176,362,637 - 176,408,180 (+)NCBIHuRef
CHM1_11206,620,337 - 206,665,788 (+)NCBICHM1_1
T2T-CHM13v2.01204,492,258 - 204,537,660 (+)NCBIT2T-CHM13v2.0
Tmcc2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391132,284,053 - 132,319,661 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1132,284,053 - 132,319,019 (-)EnsemblGRCm39 EnsemblGRCm39
GRCm381132,356,315 - 132,391,923 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1132,356,315 - 132,391,281 (-)Ensemblmm10GRCm38
MGSCv371134,252,892 - 134,287,858 (-)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv361134,183,861 - 134,218,827 (-)NCBIMGSCv36mm8
Celera1134,962,969 - 134,997,909 (-)NCBICelera
Cytogenetic Map1E4NCBI
cM Map157.24NCBI
Tmcc2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540640,985,478 - 41,025,955 (+)Ensembl
ChiLan1.0NW_00495540640,985,771 - 41,025,929 (+)NCBIChiLan1.0ChiLan1.0
TMCC2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2144,096,507 - 44,141,886 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1144,061,760 - 44,107,154 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01180,836,861 - 180,882,276 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11185,123,839 - 185,168,975 (+)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1185,123,484 - 185,168,975 (+)EnsemblpanPan2panpan1.1
TMCC2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1381,733,826 - 1,775,072 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl381,734,051 - 1,773,817 (+)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha381,827,807 - 1,868,995 (+)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.0381,730,379 - 1,771,587 (+)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl381,730,603 - 1,771,585 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1381,726,412 - 1,767,584 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0382,117,869 - 2,159,009 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0382,317,558 - 2,358,709 (+)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Tmcc2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934469,888,452 - 69,931,664 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365577,128,734 - 7,171,952 (-)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049365577,128,734 - 7,171,946 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
TMCC2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl965,924,880 - 65,952,596 (+)EnsemblsusScr11Sscrofa11.1
Sscrofa11.1965,910,175 - 65,952,606 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2972,145,511 - 72,173,638 (+)NCBISscrofa10.2Sscrofa10.2susScr3
TMCC2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12524,066,163 - 24,110,847 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2524,065,269 - 24,110,589 (-)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_02366605524,766,801 - 24,811,567 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Tmcc2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248075,890,542 - 5,927,194 (-)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_0046248075,890,638 - 5,928,488 (-)NCBIHetGla 1.0HetGla 1.0hetGla2
Tmcc2
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v1103,452,855 - 3,489,868 (+)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Tmcc2
141 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:320
Count of miRNA genes:204
Interacting mature miRNAs:231
Transcripts:ENSRNOT00000000036
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
10755495Bp387Blood pressure QTL 3873.78arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)133721624190057603Rat
9589141Insul28Insulin level QTL 2810.820.001blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)131186625456866254Rat
6893344Cm79Cardiac mass QTL 791.50.04heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)134627292251216694Rat
1354655Bp241Blood pressure QTL 2413.9arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1338975045103588154Rat
70220Bp55Blood pressure QTL 555.75arterial blood pressure trait (VT:2000000)blood pressure measurement (CMO:0000003)133992469384924693Rat
61391Bp5Blood pressure QTL 55.6arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)132485392569853925Rat
4889861Pur29Proteinuria QTL 2913.80.005urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)133996821183286298Rat
1300163Cardf1Cardiac cell morphology QTL 14.18aorta morphology trait (VT:0000272)artery lesion measurement (CMO:0000975)131244842147969993Rat
2317040Aia21Adjuvant induced arthritis QTL 212.75joint integrity trait (VT:0010548)left rear ankle joint diameter (CMO:0002149)131238432057384320Rat
631645Bp121Blood pressure QTL 1213.3arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)131746828262468282Rat
2317046Aia8Adjuvant induced arthritis QTL 83.9700000286102295joint integrity trait (VT:0010548)left rear ankle joint diameter (CMO:0002149)131238432057384320Rat
619615Bp80Blood pressure QTL 800.0354arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)13742179187286911Rat
2303032Bp328Blood pressure QTL 328arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)134373632747969993Rat
61339Bp24Blood pressure QTL 240.05arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)13600200847359539Rat
1331784Bp222Blood pressure QTL 2222.944arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)132433543255601132Rat
61340Bp25Blood pressure QTL 254.20.004arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)133708798382087983Rat
1581573Uae36Urinary albumin excretion QTL 36urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)13600200888706694Rat
1549897Stresp12Stress response QTL 123.35stress-related behavior trait (VT:0010451)number of approaches toward negative stimulus before onset of defensive burying response (CMO:0001960)134098358585983585Rat
2302275Gluco37Glucose level QTL 373.8blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)131244842148744906Rat
7207885Glom27Glomerulus QTL 273.9kidney glomerulus integrity trait (VT:0010546)kidney crescentic glomeruli count to kidney normal glomeruli count ratio (CMO:0002139)1321120177109350286Rat
4145117Mcs27Mammary carcinoma susceptibility QTL 270.0001mammary gland integrity trait (VT:0010552)post-insult time to mammary tumor formation (CMO:0000345)134599007750392939Rat
1558644Cm45Cardiac mass QTL 453.60.002heart mass (VT:0007028)heart wet weight (CMO:0000069)132624480871244808Rat
70181BpQTLcluster11Blood pressure QTL cluster 116.922arterial blood pressure trait (VT:2000000)absolute change in mean arterial blood pressure (CMO:0000533)133379409678794096Rat
61349Bp31Blood pressure QTL 315.75arterial blood pressure trait (VT:2000000)blood pressure measurement (CMO:0000003)133992469384924693Rat
2303563Bw89Body weight QTL 896body mass (VT:0001259)body weight (CMO:0000012)133483494779834947Rat
1354621Rf47Renal function QTL 473.7kidney renin amount (VT:0010559)kidney renin level (CMO:0002166)1311081740103588154Rat
2301962Cm72Cardiac mass QTL 724.12heart left ventricle mass (VT:0007031)heart left ventricle weight (CMO:0000776)133379409660914504Rat
1581554Pur11Proteinuria QTL 11urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)13600200888706694Rat
12879471Bp398Blood pressure QTL 398arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)13308875548088755Rat
12879477Bp401Blood pressure QTL 401arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)133981472684814726Rat
1331750Bp220Blood pressure QTL 2202.98arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)133996821184968211Rat
6893338Cm76Cardiac mass QTL 7600.99heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)132624480871244808Rat
11530006Niddm72Non-insulin dependent diabetes mellitus QTL 720.001blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)133828629883286298Rat
1354666Bp244Blood pressure QTL 2444.9arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)131103588154Rat
9589164Gluco66Glucose level QTL 666.670.001blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)131771133662711336Rat
7411662Foco29Food consumption QTL 2920.80.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)131186625456866254Rat

Markers in Region
D13Hmgc41  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21343,830,075 - 43,830,298 (+)MAPPERmRatBN7.2
Rnor_6.01349,168,131 - 49,168,353NCBIRnor6.0
Rnor_5.01354,236,862 - 54,237,084UniSTSRnor5.0
RGSC_v3.41345,282,442 - 45,282,664UniSTSRGSC3.4
Celera1344,164,470 - 44,164,692UniSTS
Cytogenetic Map13q13UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 67 164 91 90 59 90 59 6 354 190 11 143 81 92 31 17 17

Sequence


Ensembl Acc Id: ENSRNOT00000000036   ⟹   ENSRNOP00000000036
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1346,346,177 - 46,383,862 (-)Ensembl
mRatBN7.2 Ensembl1343,794,029 - 43,831,716 (-)Ensembl
Rnor_6.0 Ensembl1349,132,667 - 49,169,918 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000100441   ⟹   ENSRNOP00000084820
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1346,346,177 - 46,358,644 (-)Ensembl
mRatBN7.2 Ensembl1343,794,029 - 43,806,498 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000104946   ⟹   ENSRNOP00000082636
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1346,346,177 - 46,359,309 (-)Ensembl
mRatBN7.2 Ensembl1343,794,029 - 43,807,673 (-)Ensembl
RefSeq Acc Id: NM_001305128   ⟹   NP_001292057
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81346,346,177 - 46,383,862 (-)NCBI
mRatBN7.21343,794,029 - 43,831,716 (-)NCBI
Rnor_6.01349,132,685 - 49,169,771 (-)NCBI
Celera1344,128,734 - 44,166,110 (-)NCBI
Sequence:
RefSeq Acc Id: XM_003751237   ⟹   XP_003751285
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81346,346,180 - 46,382,800 (-)NCBI
mRatBN7.21343,794,031 - 43,830,654 (-)NCBI
Rnor_6.01349,133,522 - 49,169,348 (-)NCBI
Rnor_5.01354,201,418 - 54,238,775 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006249803   ⟹   XP_006249865
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81346,346,180 - 46,359,470 (-)NCBI
mRatBN7.21343,794,031 - 43,807,328 (-)NCBI
Rnor_6.01349,133,522 - 49,146,611 (-)NCBI
Rnor_5.01354,201,418 - 54,238,775 (-)NCBI
Sequence:
RefSeq Acc Id: XM_063272404   ⟹   XP_063128474
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81346,346,180 - 46,376,846 (-)NCBI
RefSeq Acc Id: XM_063272405   ⟹   XP_063128475
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81346,346,180 - 46,382,827 (-)NCBI
RefSeq Acc Id: XM_063272406   ⟹   XP_063128476
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81346,346,180 - 46,359,436 (-)NCBI
RefSeq Acc Id: XM_063272407   ⟹   XP_063128477
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81346,346,180 - 46,359,434 (-)NCBI
RefSeq Acc Id: XP_003751285   ⟸   XM_003751237
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_006249865   ⟸   XM_006249803
- Peptide Label: isoform X4
- UniProtKB: A0A8I5ZVA9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001292057   ⟸   NM_001305128
- UniProtKB: D3ZE26 (UniProtKB/TrEMBL),   A6IC49 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000000036   ⟸   ENSRNOT00000000036
Ensembl Acc Id: ENSRNOP00000082636   ⟸   ENSRNOT00000104946
Ensembl Acc Id: ENSRNOP00000084820   ⟸   ENSRNOT00000100441
RefSeq Acc Id: XP_063128475   ⟸   XM_063272405
- Peptide Label: isoform X1
RefSeq Acc Id: XP_063128474   ⟸   XM_063272404
- Peptide Label: isoform X1
RefSeq Acc Id: XP_063128476   ⟸   XM_063272406
- Peptide Label: isoform X3
- UniProtKB: A0A8I6A0X9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063128477   ⟸   XM_063272407
- Peptide Label: isoform X5

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-D3ZE26-F1-model_v2 AlphaFold D3ZE26 1-706 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1311960 AgrOrtholog
BioCyc Gene G2FUF-18317 BioCyc
Ensembl Genes ENSRNOG00000000033 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000000036 ENTREZGENE
  ENSRNOT00000000036.7 UniProtKB/TrEMBL
  ENSRNOT00000100441 ENTREZGENE
  ENSRNOT00000100441.2 UniProtKB/TrEMBL
  ENSRNOT00000104946 ENTREZGENE
  ENSRNOT00000104946.2 UniProtKB/TrEMBL
InterPro Predicted_TM_coiled-coil_2 UniProtKB/TrEMBL
KEGG Report rno:305095 UniProtKB/TrEMBL
NCBI Gene 305095 ENTREZGENE
PANTHER PTHR17613 UniProtKB/TrEMBL
  TRANSMEMBRANE AND COILED-COIL DOMAINS PROTEIN 2 UniProtKB/TrEMBL
Pfam Tmemb_cc2 UniProtKB/TrEMBL
PhenoGen Tmcc2 PhenoGen
RatGTEx ENSRNOG00000000033 RatGTEx
UniProt A0A8I5ZVA9 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6A0X9 ENTREZGENE, UniProtKB/TrEMBL
  A6IC49 ENTREZGENE, UniProtKB/TrEMBL
  D3ZE26 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2008-09-25 Tmcc2  transmembrane and coiled-coil domain family 2  Tmcc2  transmembrane and coiled-coil domains 2  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-02-27 Tmcc2  transmembrane and coiled-coil domains 2  RGD1311960_predicted  similar to RIKEN cDNA 1110063G11 (predicted)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2005-01-20 RGD1311960_predicted  similar to RIKEN cDNA 1110063G11 (predicted)  LOC305095_predicted    Symbol and Name status set to approved 1331353 APPROVED
2005-01-12 LOC305095_predicted  similar to RIKEN cDNA 1110063G11 (predicted)      Symbol and Name status set to provisional 70820 PROVISIONAL