Gnptg (Rattus norvegicus - Norway rat) |
| Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
GRCr8 | 10 | 14,756,685 - 14,761,636 (-) | NCBI | GRCr8 | GRCr8 | | GRCr8 | mRatBN7.2 | 10 | 14,252,186 - 14,257,128 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 10 | 14,251,136 - 14,257,096 (-) | Ensembl | | | | mRatBN7.2 | UTH_Rnor_SHR_Utx | 10 | 18,992,931 - 18,997,848 (-) | NCBI | UTH_Rnor_SHR_Utx | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 10 | 18,481,793 - 18,486,710 (-) | NCBI | UTH_Rnor_SHRSP_BbbUtx_1.0 | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 10 | 13,981,008 - 13,985,925 (-) | NCBI | UTH_Rnor_WKY_Bbb_1.0 | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 10 | 14,593,050 - 14,597,995 (-) | NCBI | Rnor_6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 10 | 14,593,056 - 14,597,969 (-) | Ensembl | | | rn6 | Rnor6.0 | Rnor_5.0 | 10 | 14,410,645 - 14,415,559 (-) | NCBI | Rnor_5.0 | Rnor_5.0 | rn5 | | RGSC_v3.4 | 10 | 14,482,982 - 14,487,901 (-) | NCBI | RGSC_v3.4 | RGSC_v3.4 | rn4 | | Celera | 10 | 13,924,610 - 13,929,529 (-) | NCBI | | Celera | | | RGSC_v3.1 | 10 | 14,483,220 - 14,487,902 (-) | NCBI | | | | | Cytogenetic Map | 10 | q12 | NCBI | | | | |
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GNPTG (Homo sapiens - human) |
| Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
GRCh38 | 16 | 1,351,931 - 1,364,113 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 16 | 1,351,931 - 1,365,737 (+) | Ensembl | | | hg38 | GRCh38 | GRCh37 | 16 | 1,401,932 - 1,414,114 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 16 | 1,341,933 - 1,353,353 (+) | NCBI | Build 36 | Build 36 | hg18 | NCBI36 | Build 34 | 16 | 1,341,932 - 1,353,352 | NCBI | | | | | Celera | 16 | 1,616,015 - 1,627,466 (+) | NCBI | | Celera | | | Cytogenetic Map | 16 | p13.3 | NCBI | | | | | HuRef | 16 | 1,330,298 - 1,341,747 (+) | NCBI | | HuRef | | | CHM1_1 | 16 | 1,401,841 - 1,413,248 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 16 | 1,368,108 - 1,380,245 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Gnptg (Mus musculus - house mouse) |
| Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
GRCm39 | 17 | 25,451,324 - 25,459,302 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 17 | 25,452,305 - 25,459,098 (-) | Ensembl | | GRCm39 Ensembl | | GRCm39 | GRCm38 | 17 | 25,232,224 - 25,240,328 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 17 | 25,233,331 - 25,240,124 (-) | Ensembl | | | mm10 | GRCm38 | MGSCv37 | 17 | 25,371,262 - 25,377,061 (-) | NCBI | MGSCv37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 17 | 24,961,917 - 24,967,716 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 17 | 23,126,285 - 23,127,879 (-) | NCBI | | Celera | | | Cytogenetic Map | 17 | A3.3 | NCBI | | | | | cM Map | 17 | 12.53 | NCBI | | | | |
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Gnptg (Chinchilla lanigera - long-tailed chinchilla) |
| Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
ChiLan1.0 Ensembl | NW_004955442 | 15,870,619 - 15,881,511 (-) | Ensembl | | | | | ChiLan1.0 | NW_004955442 | 15,870,409 - 15,881,552 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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GNPTG (Pan paniscus - bonobo/pygmy chimpanzee) |
| Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
NHGRI_mPanPan1-v2 | 18 | 1,614,997 - 1,626,971 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 16 | 5,402,259 - 5,414,240 (+) | NCBI | | NHGRI_mPanPan1 | | | PanPan1.1 | 16 | 1,407,410 - 1,418,523 (+) | NCBI | PanPan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 16 | 1,407,385 - 1,418,523 (+) | Ensembl | | | panPan2 | panpan1.1 |
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GNPTG (Canis lupus familiaris - dog) |
| Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
CanFam3.1 | 6 | 39,405,801 - 39,418,672 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 6 | 39,405,809 - 39,419,392 (-) | Ensembl | | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 6 | 40,673,743 - 40,686,604 (-) | NCBI | Dog10K_Boxer_Tasha | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 6 | 39,752,035 - 39,764,898 (-) | NCBI | ROS_Cfam_1.0 | ROS_Cfam_1.0 | | | UMICH_Zoey_3.1 | 6 | 39,428,987 - 39,441,626 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 6 | 39,401,427 - 39,414,269 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 6 | 39,879,918 - 39,892,578 (-) | NCBI | UU_Cfam_GSD_1.0 | UU_Cfam_GSD_1.0 | | |
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Gnptg (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
| Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
HiC_Itri_2 | NW_024409344 | 104,168,974 - 104,179,823 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936694 | 2,529,640 - 2,540,328 (-) | Ensembl | | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936694 | 2,529,634 - 2,540,474 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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GNPTG (Sus scrofa - pig) |
| Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
Sscrofa11.1 Ensembl | 3 | 40,512,088 - 40,534,187 (-) | Ensembl | | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 3 | 40,512,093 - 40,534,217 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 3 | 41,989,341 - 42,010,552 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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GNPTG (Chlorocebus sabaeus - green monkey) |
| Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
ChlSab1.1 | 5 | 1,240,291 - 1,251,141 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 5 | 1,239,693 - 1,255,165 (+) | Ensembl | | ChlSab1.1 Ensembl | chlSab2 | Vervet-AGM | Vero_WHO_p1.0 | NW_023666068 | 29,832,661 - 29,843,520 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Gnptg (Heterocephalus glaber - naked mole-rat) |
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Gnptg (Rattus rattus - black rat) |
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