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Gene: Dnajc22 (DnaJ heat shock protein family (Hsp40) member C22) Rattus norvegicus

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Symbol:

Dnajc22

Name:

DnaJ heat shock protein family (Hsp40) member C22

RGD ID:

1311098

Description:

Predicted to be active in membrane. Orthologous to human DNAJC22 (DnaJ heat shock protein family (Hsp40) member C22); INTERACTS WITH 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine; acetamide.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

DnaJ (Hsp40) homolog, subfamily C, member 22; dnaJ homolog subfamily C member 22; LOC362998; RGD1311098; similar to RIKEN cDNA 2810451A06

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	7	132,136,516 - 132,141,802 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	7	132,136,545 - 132,142,758 (+)	Ensembl				GRCr8
mRatBN7.2	7	130,257,504 - 130,262,880 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	7	130,257,851 - 130,263,230 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	7	132,068,096 - 132,072,972 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	7	134,293,670 - 134,298,546 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	7	134,206,184 - 134,211,060 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	7	140,781,676 - 140,786,929 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	7	140,781,799 - 140,786,906 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	X	115,286,646 - 115,291,879 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	7	137,875,669 - 137,880,647 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	7	126,742,637 - 126,747,500 (+)	NCBI		Celera
RGSC_v3.1	7	137,952,105 - 137,957,084 (+)	NCBI
Cytogenetic Map	7	q36	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(1->4)-beta-D-glucan (ISO)

17beta-estradiol (EXP,ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

4,4'-sulfonyldiphenol (ISO)

4-hydroxyphenyl retinamide (ISO)

acetamide (EXP)

acrylamide (EXP)

arsane (ISO)

arsenic atom (ISO)

atrazine (EXP)

benzo[a]pyrene (ISO)

bisphenol A (EXP,ISO)

bisphenol F (ISO)

cadmium dichloride (ISO)

copper(II) sulfate (ISO)

Cuprizon (EXP)

cyclosporin A (ISO)

epoxiconazole (ISO)

flutamide (EXP)

formaldehyde (ISO)

genistein (ISO)

hydrogen peroxide (ISO)

inulin (ISO)

leflunomide (EXP)

lidocaine (EXP)

manganese atom (ISO)

manganese(0) (ISO)

manganese(II) chloride (ISO)

methylisothiazolinone (ISO)

N-methyl-4-phenylpyridinium (ISO)

niclosamide (ISO)

paracetamol (ISO)

perfluorohexanesulfonic acid (ISO)

perfluorooctane-1-sulfonic acid (ISO)

pirinixic acid (ISO)

potassium dichromate (ISO)

rotenone (ISO)

silicon dioxide (ISO)

sodium arsenite (ISO)

titanium dioxide (ISO)

triclosan (ISO)

triptonide (ISO)

troglitazone (ISO)

valproic acid (ISO)

vorinostat (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Cellular Component

membrane (IBA,IEA)

Molecular Function

protein binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
3.	GOA pipeline	RGD automated data pipeline
4.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
5.	Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences.	Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11.

Genomics

Comparative Map Data

Dnajc22
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	7	132,136,516 - 132,141,802 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	7	132,136,545 - 132,142,758 (+)	Ensembl				GRCr8
mRatBN7.2	7	130,257,504 - 130,262,880 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	7	130,257,851 - 130,263,230 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	7	132,068,096 - 132,072,972 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	7	134,293,670 - 134,298,546 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	7	134,206,184 - 134,211,060 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	7	140,781,676 - 140,786,929 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	7	140,781,799 - 140,786,906 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	X	115,286,646 - 115,291,879 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	7	137,875,669 - 137,880,647 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	7	126,742,637 - 126,747,500 (+)	NCBI		Celera
RGSC_v3.1	7	137,952,105 - 137,957,084 (+)	NCBI
Cytogenetic Map	7	q36	NCBI

DNAJC22
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	12	49,346,888 - 49,353,690 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	12	49,345,607 - 49,357,546 (+)	Ensembl			hg38	GRCh38
GRCh37	12	49,740,671 - 49,747,473 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	12	48,027,308 - 48,031,964 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Celera	12	48,534,339 - 48,538,995 (+)	NCBI		Celera
Cytogenetic Map	12	q13.12	NCBI
HuRef	12	46,771,447 - 46,776,103 (+)	NCBI		HuRef
CHM1_1	12	49,706,736 - 49,711,392 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	12	49,309,047 - 49,315,879 (+)	NCBI		T2T-CHM13v2.0

Dnajc22
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	15	98,991,102 - 99,002,618 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	15	98,991,051 - 99,002,618 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	15	99,099,134 - 99,104,709 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	15	99,093,170 - 99,104,737 (+)	Ensembl			mm10	GRCm38
MGSCv37	15	98,929,915 - 98,935,140 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	15	98,927,518 - 98,932,743 (+)	NCBI		MGSCv36	mm8
Celera	15	101,254,372 - 101,259,591 (+)	NCBI		Celera
Cytogenetic Map	15	F1	NCBI
cM Map	15	55.87	NCBI

Dnajc22
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955500	8,153,299 - 8,157,222 (+)	Ensembl
ChiLan1.0	NW_004955500	8,150,186 - 8,154,905 (+)	NCBI	ChiLan1.0	ChiLan1.0

DNAJC22
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	10	44,831,568 - 44,838,432 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	12	44,828,329 - 44,835,193 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	12	39,399,917 - 39,404,947 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	12	40,283,685 - 40,290,459 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	12	40,283,685 - 40,290,459 (-)	Ensembl			panPan2	panpan1.1

DNAJC22
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	27	5,262,511 - 5,267,341 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	27	5,262,563 - 5,266,428 (-)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	27	40,989,267 - 40,995,754 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	27	5,312,338 - 5,318,837 (-)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	27	5,314,020 - 5,318,235 (-)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	27	5,277,732 - 5,284,225 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	27	5,267,372 - 5,273,846 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	27	41,382,382 - 41,387,245 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Dnajc22
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404945	66,060,553 - 66,064,111 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936512	7,101,244 - 7,104,276 (+)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936512	7,102,388 - 7,104,270 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

DNAJC22
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	5	15,322,674 - 15,335,950 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	5	15,322,489 - 15,335,038 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	5	15,799,484 - 15,813,118 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

DNAJC22
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	11	45,575,294 - 45,580,551 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	11	45,577,338 - 45,581,838 (+)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666037	200,548,111 - 200,552,373 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Dnajc22
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624816	2,835,134 - 2,837,886 (-)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624816	2,834,766 - 2,838,973 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Dnajc22
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	1	271,926,653 - 271,931,371 (+)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Dnajc22
30 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	35
Count of miRNA genes:	30
Interacting mature miRNAs:	31
Transcripts:	ENSRNOT00000021339
Prediction methods:	Miranda, Pita, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1331748	Bp215	Blood pressure QTL 215	4.043		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	7	110725024	135371468	Rat
1354582	Stl11	Serum triglyceride level QTL 11	3.42		blood triglyceride amount (VT:0002644)	serum triglyceride level (CMO:0000360)	7	121393075	137014596	Rat
634331	Pia17	Pristane induced arthritis QTL 17	4.7		joint integrity trait (VT:0010548)	arthritic paw count (CMO:0001460)	7	132099939	137014596	Rat
731176	Glom5	Glomerulus QTL 5	2.5	0.0035	kidney glomerulus morphology trait (VT:0005325)	count of superficial glomeruli not directly contacting the kidney surface (CMO:0001002)	7	98549867	137014596	Rat
1300112	Bp183	Blood pressure QTL 183	3.51		arterial blood pressure trait (VT:2000000)	blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)	7	119280025	135560836	Rat
61428	Scl3	Serum cholesterol level QTL 3	3.2		blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	7	100548246	137014596	Rat
61397	Bw17	Body weight QTL 17	6.3		body mass (VT:0001259)	body weight (CMO:0000012)	7	95485047	137014596	Rat
1331746	Kidm9	Kidney mass QTL 9	3.934		kidney mass (VT:0002707)	right kidney wet weight (CMO:0000082)	7	82111245	134948181	Rat
1358914	Bp266	Blood pressure QTL 266			arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	7	115313999	136544683	Rat
1331731	Bp216	Blood pressure QTL 216	2.851		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	7	104186212	135371468	Rat
1549899	Stresp8	Stress response QTL 8	4.37	0.0008	stress-related behavior trait (VT:0010451)	defensive burying duration (CMO:0001961)	7	92362341	137014596	Rat
1358891	Bp265	Blood pressure QTL 265	2.21		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	7	71827901	136544683	Rat

Markers in Region

AI506245

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	7	130,262,573 - 130,262,714 (+)	MAPPER	mRatBN7.2
Rnor_6.0	7	140,786,623 - 140,786,763	NCBI	Rnor6.0
Rnor_5.0	X	115,291,573 - 115,291,713	UniSTS	Rnor5.0
RGSC_v3.4	7	137,880,357 - 137,880,497	UniSTS	RGSC3.4
Celera	7	126,747,194 - 126,747,334	UniSTS
Cytogenetic Map	7	q36	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	161	91	90	59	80	59	6	344	180	11	140	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001014204	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006257363	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC110690	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC086949	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH474035	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000007	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000087932 ⟹ ENSRNOP00000073678

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	7	132,136,545 - 132,142,758 (+)	Ensembl
mRatBN7.2 Ensembl	7	130,257,851 - 130,263,230 (+)	Ensembl
Rnor_6.0 Ensembl	7	140,781,799 - 140,786,906 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000167586 ⟹ ENSRNOP00000102734

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	7	132,136,545 - 132,141,799 (+)	Ensembl

RefSeq Acc Id:

NM_001014204 ⟹ NP_001014226

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	132,136,808 - 132,141,802 (+)	NCBI
mRatBN7.2	7	130,257,883 - 130,262,880 (+)	NCBI
Rnor_6.0	7	140,781,935 - 140,786,929 (+)	NCBI
Rnor_5.0	X	115,286,646 - 115,291,879 (+)	NCBI
RGSC_v3.4	7	137,875,669 - 137,880,647 (+)	RGD
Celera	7	126,742,637 - 126,747,500 (+)	RGD

Sequence:

show sequence

CTGGTCTGAAGCGGCTTGGCAGCCTGAGCAGTCAGGTACTGCGGCTCTACTGGCACTGCCTGAG
GGTCCAAGGACTGTGGTGATTCTCATGGAGGACCCTGAGATTTCTGCAATCTGATCAGTGTCAA
ATGCCACTGGATTCGCTCTGAGACTCTTGCCCTAGAGGATGGCCAAAGGGCTCCTGATGACCTA
TGCCCTTTGGGCTTTTGGGGGCCCTGTTGGACTACACCACCTGTATCTGGGAAGGGACAGCCAT
GCCCTGCTCTGGATGCTCACCCTGGGAGGTGGTGGGTTGGGCTGGCTCTGGGAATTCTGGAAGC
TTCCAAGCTTTGTGGCTCAAGCCAACGGAGTCCAGAGCTGGAAACAGAGGCCAGAAGAGGAGAG
ACCCCCTCTGAGTCTCCTTCGCTTTGCTTCCCAGATGGTAGTAGGTGTCTATTTTGGTCTCGTG
GCTCTGATCAGCCTTTCTTCCACAGCCAACTTCTATATAGTGGGCCTCCCACTGGCCGTTGGCT
TAGGGGTCTTGCTGGTAGCTGCTGTTGGTAACCAGACCTCAGACTTTAAGAACACCTTAGGAGC
AGCCTTCCTCACTTCCCCTGTGTTCTATGGCCGCCCCATAGCCATCCTGCCCATCAGTTTGGCT
GCCAGCATTACAGCCCAGAAGCATCGCCGATACAAAGTTTCAGCAGTGTCAGAGACACTTAGTG
TGCGCCTCTACCGTGTGGGCTTAGCTTACCTCGCCTTCACAGGCCCACTGGCCTACAGTACCCT
GTACAATACAGCTGCCACCATTAACTACGCAGCAGAAACCCTTGGTTCTTTCTTGAGTTGGTTC
AACTTTTTCCCACTTCTCGGTCGTCTCGTGGAGTCTGTCTTGCTTCTGCCTTGCCGGATCTGGT
GGCTACTGGTTGGGGCTCCTGGCTTCAATAGCAGCCAGTTCCAGGAATGGGAAAAGCTCTATGA
ATTTGTTGACAGTTTTCAGGATGAGAAACGTCAGCTGGCTCACCAGGTTCTGGGCATTCCAGAA
GGAGCCACCAATGAAGAAATACATCGGAGTTACCGAGACCTGGTGAAGGTCTGGCACCCAGACC
ACAACCGGCACCAGACGGAGGAGGCCCAGAGGCACTTCCTAGAGATCCAGGCTGCCTATGAAGT
CTTGAGTCAGCCCAAGAAGCCCAGAGCATCCTGGAGGTGAAAGCAACCCCTCAAGGATGGGCTC
AGTCTTGTCAGCACAGTCTTCAAAACCCAGGACCTAACAGTCTTAAAGAAGCTGCTCGATAGAG
GCGAGGGGAACTTTAAAGGAATGAGGAAGCATGTGGTAGAAAATATATTTATGTGTTAAATTTC
TAAAAAAAAAAAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_006257363 ⟹ XP_006257425

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	132,136,516 - 132,141,802 (+)	NCBI
mRatBN7.2	7	130,257,504 - 130,262,880 (+)	NCBI
Rnor_6.0	7	140,781,676 - 140,786,929 (+)	NCBI
Rnor_5.0	X	115,286,646 - 115,291,879 (+)	NCBI

Sequence:

show sequence

GGGCGCGGTTCCAGGTCCTACAGTAACAAACTGGGCGAGCCTGGGGAAAGCTTCCCGAAGAGTT
CAGGGGAGTTGGCGAGCAGAGAAGTGCAGGACCGGAAGGTGGCTCCGAAGGGGCTGACCAGGGC
TTTCGGGGCGGGGCCTGGAGGAGGTGGCCTGACTTCAGACGCACAGTCAGCACTGAGGGACAAA
GTCCACTTATGTGGAAGTGGGATCAGTAACAGAGGGGCCATTTTGAATCTGTGGTCAAAGGAAA
TGACTGGTCTGAAGCGGCTTGGCAGCCTGAGCAGTCAGGTACTGCGGCTCTACTGGCACTGCCT
GAGGGTGAGTTCGCTTGAAGTAGGTCCAAGGACTGTGGTGATTCTCATGGAGGACCCTGAGATT
TCTGCAATCTGATCAGTGTCAAATGCCACTGGATTCGCTCTGAGACTCTTGCCCTAGAGGATGG
CCAAAGGGCTCCTGATGACCTATGCCCTTTGGGCTTTTGGGGGCCCTGTTGGACTACACCACCT
GTATCTGGGAAGGGACAGCCATGCCCTGCTCTGGATGCTCACCCTGGGAGGTGGTGGGTTGGGC
TGGCTCTGGGAATTCTGGAAGCTTCCAAGCTTTGTGGCTCAAGCCAACGGAGTCCAGAGCTGGA
AACAGAGGCCAGAAGAGGAGAGACCCCCTCTGAGTCTCCTTCGCTTTGCTTCCCAGATGGTAGT
AGGTGTCTATTTTGGTCTCGTGGCTCTGATCAGCCTTTCTTCCACAGCCAACTTCTATATAGTG
GGCCTCCCACTGGCCGTTGGCTTAGGGGTCTTGCTGGTAGCTGCTGTTGGTAACCAGACCTCAG
ACTTTAAGAACACCTTAGGAGCAGCCTTCCTCACTTCCCCTGTGTTCTATGGCCGCCCCATAGC
CATCCTGCCCATCAGTTTGGCTGCCAGCATTACAGCCCAGAAGCATCGCCGATACAAAGTTTCA
GCAGTGTCAGAGACACTTAGTGTGCGCCTCTACCGTGTGGGCTTAGCTTACCTCGCCTTCACAG
GCCCACTGGCCTACAGTACCCTGTACAATACAGCTGCCACCATTAACTACGCAGCAGAAACCCT
TGGTTCTTTCTTGAGTTGGTTCAACTTTTTCCCACTTCTCGGTCGTCTCGTGGAGTCTGTCTTG
CTTCTGCCTTGCCGGATCTGGTGGCTACTGGTTGGGGCTCCTGGCTTCAATAGCAGCCAGTTCC
AGGAATGGGAAAAGCTCTATGAATTTGTTGACAGTTTTCAGGATGAGAAACGTCAGCTGGCTCA
CCAGGTTCTGGGCATTCCAGAAGGAGCCACCAATGAAGAAATACATCGGAGTTACCGAGACCTG
GTGAAGGTCTGGCACCCAGACCACAACCGGCACCAGACGGAGGAGGCCCAGAGGCACTTCCTAG
AGATCCAGGCTGCCTATGAAGTCTTGAGTCAGCCCAAGAAGCCCAGAGCATCCTGGAGGTGAAA
GCAACCCCTCAAGGATGGGCTCAGTCTTGTCAGCACAGTCTTCAAAACCCAGGACCTAACAGTC
TTAAAGAAGCTGCTCGATAGAGGCGAGGGGAACTTTAAAGGAATGAGGAAGCATGTGGTAGAAA
ATATATTTATGTGTTANATTTCTAAA

hide sequence

Protein Sequences


Protein RefSeqs	NP_001014226	(Get FASTA)	NCBI Sequence Viewer
	XP_006257425	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH86949	(Get FASTA)	NCBI Sequence Viewer
	EDL87001	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000073678.1
	ENSRNOP00000102734
GenBank Protein	Q5PR00	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_001014226 ⟸ NM_001014204

- UniProtKB:

Q5PR00 (UniProtKB/Swiss-Prot), A6KCE1 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MAKGLLMTYALWAFGGPVGLHHLYLGRDSHALLWMLTLGGGGLGWLWEFWKLPSFVAQANGVQS
WKQRPEEERPPLSLLRFASQMVVGVYFGLVALISLSSTANFYIVGLPLAVGLGVLLVAAVGNQT
SDFKNTLGAAFLTSPVFYGRPIAILPISLAASITAQKHRRYKVSAVSETLSVRLYRVGLAYLAF
TGPLAYSTLYNTAATINYAAETLGSFLSWFNFFPLLGRLVESVLLLPCRIWWLLVGAPGFNSSQ
FQEWEKLYEFVDSFQDEKRQLAHQVLGIPEGATNEEIHRSYRDLVKVWHPDHNRHQTEEAQRHF
LEIQAAYEVLSQPKKPRASWR

hide sequence

RefSeq Acc Id:	XP_006257425 ⟸ XM_006257363
- Peptide Label:	isoform X1
- UniProtKB:	Q5PR00 (UniProtKB/Swiss-Prot), A6KCE1 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAKGLLMTYALWAFGGPVGLHHLYLGRDSHALLWMLTLGGGGLGWLWEFWKLPSFVAQANGVQS WKQRPEEERPPLSLLRFASQMVVGVYFGLVALISLSSTANFYIVGLPLAVGLGVLLVAAVGNQT SDFKNTLGAAFLTSPVFYGRPIAILPISLAASITAQKHRRYKVSAVSETLSVRLYRVGLAYLAF TGPLAYSTLYNTAATINYAAETLGSFLSWFNFFPLLGRLVESVLLLPCRIWWLLVGAPGFNSSQ FQEWEKLYEFVDSFQDEKRQLAHQVLGIPEGATNEEIHRSYRDLVKVWHPDHNRHQTEEAQRHF LEIQAAYEVLSQPKKPRASWR hide sequence

Ensembl Acc Id:

ENSRNOP00000073678 ⟸ ENSRNOT00000087932

Ensembl Acc Id:

ENSRNOP00000102734 ⟸ ENSRNOT00000167586

Protein Domains

J TM2

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q5PR00-F1-model_v2	AlphaFold	Q5PR00	1-341	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13695640

Promoter ID:

EPDNEW_R6165

Type:

initiation region

Name:

Dnajc22_1

Description:

DnaJ heat shock protein family member C22

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	7	140,781,840 - 140,781,900	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1311098	AgrOrtholog
BioCyc Gene	G2FUF-32085	BioCyc
Ensembl Genes	ENSRNOG00000053498	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript	ENSRNOT00000087932.2	UniProtKB/Swiss-Prot
	ENSRNOT00000167586	ENTREZGENE
Gene3D-CATH	1.10.287.110	UniProtKB/Swiss-Prot
IMAGE_CLONE	IMAGE:7325189	IMAGE-MGC_LOAD
InterPro	DnaJ_domain	UniProtKB/Swiss-Prot
	J_dom_sf	UniProtKB/Swiss-Prot
	TM2	UniProtKB/Swiss-Prot
KEGG Report	rno:362998	UniProtKB/Swiss-Prot
MGC_CLONE	MGC:108814	IMAGE-MGC_LOAD
NCBI Gene	362998	ENTREZGENE
PANTHER	DNAJ HOMOLOG SUBFAMILY C MEMBER 22	UniProtKB/Swiss-Prot
	DNAJ HOMOLOG SUBFAMILY C MEMBER 22	UniProtKB/Swiss-Prot
Pfam	DnaJ	UniProtKB/Swiss-Prot
	TM2	UniProtKB/Swiss-Prot
PhenoGen	Dnajc22	PhenoGen
PRINTS	JDOMAIN	UniProtKB/Swiss-Prot
PROSITE	DNAJ_2	UniProtKB/Swiss-Prot
RatGTEx	ENSRNOG00000053498	RatGTEx
SMART	DnaJ	UniProtKB/Swiss-Prot
Superfamily-SCOP	SSF46565	UniProtKB/Swiss-Prot
UniProt	A6KCE1	ENTREZGENE, UniProtKB/TrEMBL
	DJC22_RAT	UniProtKB/Swiss-Prot, ENTREZGENE

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2015-11-25	Dnajc22	DnaJ heat shock protein family (Hsp40) member C22	Dnajc22	DnaJ (Hsp40) homolog, subfamily C, member 22	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-09-09	Dnajc22	DnaJ (Hsp40) homolog, subfamily C, member 22	RGD1311098	similar to RIKEN cDNA 2810451A06	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2005-12-06	RGD1311098	similar to RIKEN cDNA 2810451A06	RGD1311098_predicted	similar to RIKEN cDNA 2810451A06 (predicted)	Symbol and Name updated	1559027	APPROVED
2005-01-20	RGD1311098_predicted	similar to RIKEN cDNA 2810451A06 (predicted)	LOC362998_predicted		Symbol and Name status set to approved	1331353	APPROVED
2005-01-12	LOC362998_predicted	similar to RIKEN cDNA 2810451A06 (predicted)			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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