Aggf1 (Rattus norvegicus - Norway rat) |
| Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
GRCr8 | 2 | 28,354,073 - 28,380,794 (-) | NCBI | GRCr8 | GRCr8 | | GRCr8 | GRCr8 Ensembl | 2 | 28,354,073 - 28,380,759 (-) | Ensembl | | | | GRCr8 | mRatBN7.2 | 2 | 26,619,336 - 26,646,050 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 2 | 26,619,339 - 26,645,952 (-) | Ensembl | | | | mRatBN7.2 | Dahl_SR_JrHsd | 2 | 28,451,866 - 28,478,446 (-) | NCBI | | Dahl_SR_JrHsd | | | Lyon_Normotensive | 2 | 28,471,188 - 28,497,798 (-) | NCBI | | Lyon_Normotensive | | | Lyon_Hypertensive | 2 | 28,396,042 - 28,422,652 (-) | NCBI | | Lyon_Hypertensive | | | F344_StmMcwi | 2 | 28,299,945 - 28,326,466 (-) | NCBI | | F344_StmMcwi | | | Rnor_6.0 | 2 | 25,068,804 - 25,095,429 (-) | NCBI | Rnor_6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 2 | 25,069,620 - 25,095,106 (-) | Ensembl | | | rn6 | Rnor6.0 | Rnor_5.0 | 2 | 44,227,286 - 44,253,899 (-) | NCBI | Rnor_5.0 | Rnor_5.0 | rn5 | | RGSC_v3.4 | 2 | 25,723,668 - 25,749,359 (-) | NCBI | RGSC_v3.4 | RGSC_v3.4 | rn4 | | Celera | 2 | 22,684,509 - 22,711,225 (-) | NCBI | | Celera | | | RGSC_v3.1 | 2 | 25,644,037 - 25,679,865 (-) | NCBI | | | | | Cytogenetic Map | 2 | q12 | NCBI | | | | |
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AGGF1 (Homo sapiens - human) |
| Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
GRCh38 | 5 | 77,030,404 - 77,065,234 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 5 | 77,029,251 - 77,065,234 (+) | Ensembl | | | hg38 | GRCh38 | GRCh37 | 5 | 76,326,229 - 76,361,059 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 5 | 76,361,988 - 76,396,794 (+) | NCBI | Build 36 | Build 36 | hg18 | NCBI36 | Build 34 | 5 | 76,361,987 - 76,396,791 | NCBI | | | | | Celera | 5 | 72,220,718 - 72,255,361 (+) | NCBI | | Celera | | | Cytogenetic Map | 5 | q13.3 | NCBI | | | | | HuRef | 5 | 71,532,859 - 71,567,837 (+) | NCBI | | HuRef | | | CHM1_1 | 5 | 75,759,108 - 75,794,521 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 5 | 77,512,128 - 77,546,904 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Aggf1 (Mus musculus - house mouse) |
| Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
GRCm39 | 13 | 95,487,191 - 95,511,865 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 13 | 95,487,191 - 95,511,860 (-) | Ensembl | | GRCm39 Ensembl | | GRCm39 | GRCm38 | 13 | 95,350,683 - 95,375,357 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 13 | 95,350,683 - 95,375,352 (-) | Ensembl | | | mm10 | GRCm38 | MGSCv37 | 13 | 96,120,671 - 96,145,289 (-) | NCBI | MGSCv37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 13 | 96,451,415 - 96,476,033 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 13 | 98,972,068 - 98,996,687 (-) | NCBI | | Celera | | | Cytogenetic Map | 13 | D1 | NCBI | | | | | cM Map | 13 | 49.41 | NCBI | | | | |
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Aggf1 (Chinchilla lanigera - long-tailed chinchilla) |
| Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
ChiLan1.0 Ensembl | NW_004955425 | 23,847,673 - 23,874,404 (-) | Ensembl | | | | | ChiLan1.0 | NW_004955425 | 23,847,502 - 23,873,964 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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AGGF1 (Pan paniscus - bonobo/pygmy chimpanzee) |
| Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
NHGRI_mPanPan1-v2 | 4 | 38,232,858 - 38,265,220 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 5 | 36,386,503 - 36,418,418 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 5 | 38,236,209 - 38,268,530 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 5 | 38,762,317 - 38,794,606 (-) | NCBI | PanPan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 5 | 38,762,317 - 38,794,594 (-) | Ensembl | | | panPan2 | panpan1.1 |
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AGGF1 (Canis lupus familiaris - dog) |
| Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
CanFam3.1 | 3 | 29,578,050 - 29,682,265 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 3 | 29,647,592 - 29,682,776 (-) | Ensembl | | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 3 | 30,804,004 - 30,921,635 (-) | NCBI | Dog10K_Boxer_Tasha | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 3 | 29,486,014 - 29,601,272 (-) | NCBI | ROS_Cfam_1.0 | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 3 | 29,566,220 - 29,601,792 (-) | Ensembl | | | | ROS_Cfam_1.0 Ensembl | UMICH_Zoey_3.1 | 3 | 29,420,293 - 29,538,033 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 3 | 29,400,940 - 29,518,896 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 3 | 29,770,262 - 29,888,021 (-) | NCBI | UU_Cfam_GSD_1.0 | UU_Cfam_GSD_1.0 | | |
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Aggf1 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
| Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
HiC_Itri_2 | NW_024407213 | 185,749,025 - 185,789,458 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936549 | 5,068,656 - 5,111,406 (+) | Ensembl | | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936549 | 5,069,164 - 5,109,299 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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AGGF1 (Sus scrofa - pig) |
| Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
Sscrofa11.1 Ensembl | 2 | 85,890,481 - 85,934,358 (+) | Ensembl | | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 2 | 85,890,423 - 85,941,314 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 2 | 87,506,911 - 87,552,643 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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AGGF1 (Chlorocebus sabaeus - green monkey) |
| Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
ChlSab1.1 | 4 | 71,277,293 - 71,309,973 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 4 | 71,277,315 - 71,310,159 (+) | Ensembl | | ChlSab1.1 Ensembl | chlSab2 | Vervet-AGM | Vero_WHO_p1.0 | NW_023666049 | 20,115,923 - 20,148,633 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Aggf1 (Heterocephalus glaber - naked mole-rat) |
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Aggf1 (Rattus rattus - black rat) |
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