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Gene: Cnot4 (CCR4-NOT transcription complex, subunit 4) Rattus norvegicus

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Symbol:

Cnot4

Name:

CCR4-NOT transcription complex, subunit 4

RGD ID:

1310318

Description:

Predicted to enable ubiquitin-protein transferase activity. Predicted to be involved in protein autoubiquitination; regulation of megakaryocyte differentiation; and ubiquitin-dependent protein catabolic process. Predicted to be located in cytosol and nucleus. Predicted to be part of CCR4-NOT complex. Orthologous to human CNOT4 (CCR4-NOT transcription complex subunit 4); PARTICIPATES IN RNA degradation pathway; INTERACTS WITH 17alpha-ethynylestradiol; 2,3,7,8-tetrachlorodibenzodioxine; 4-amino-2,6-dinitrotoluene.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

CCR4-NOT transcription complex subunit 4; LOC312227; MGC114505

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	CNOT4 (CCR4-NOT transcription complex subunit 4)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, Panther, Treefam
Mus musculus (house mouse):	Cnot4 (CCR4-NOT transcription complex, subunit 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Cnot4 (CCR4-NOT transcription complex subunit 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	CNOT4 (CCR4-NOT transcription complex subunit 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	CNOT4 (CCR4-NOT transcription complex subunit 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Cnot4 (CCR4-NOT transcription complex subunit 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	CNOT4 (CCR4-NOT transcription complex subunit 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	CNOT4 (CCR4-NOT transcription complex subunit 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Cnot4 (CCR4-NOT transcription complex subunit 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Cnot4 (CCR4-NOT transcription complex subunit 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	RPL13 (ribosomal protein L13)	HGNC	OMA
Alliance orthologs ³
Homo sapiens (human):	CNOT4 (CCR4-NOT transcription complex subunit 4)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Cnot4 (CCR4-NOT transcription complex, subunit 4)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	cnot4a (CCR4-NOT transcription complex, subunit 4a)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	cnot4b (CCR4-NOT transcription complex, subunit 4b)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	Cnot4	Alliance	DIOPT (Ensembl Compara\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	Cnot4	Alliance	DIOPT (Ensembl Compara\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Saccharomyces cerevisiae (baker's yeast):	MOT2	Alliance	DIOPT (Hieranoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	ntl-4	Alliance	DIOPT (InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	cnot4	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB)
Xenopus tropicalis (tropical clawed frog):	cnot4	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	4	64,679,903 - 64,781,432 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	4	64,679,904 - 64,738,083 (-)	Ensembl				GRCr8
mRatBN7.2	4	63,712,770 - 63,814,355 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	4	63,712,770 - 63,814,360 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	4	68,670,159 - 68,772,137 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	4	64,585,781 - 64,687,763 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	4	62,988,285 - 63,090,269 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	4	62,561,443 - 62,663,225 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	4	62,561,444 - 62,663,200 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	4	62,288,219 - 62,389,530 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	4	62,437,688 - 62,548,524 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	4	58,760,849 - 58,862,549 (-)	NCBI		Celera
RGSC_v3.1	4	62,713,823 - 62,824,684 (-)	NCBI
Cytogenetic Map	4	q22	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dichloroethane (ISO)

1,2-dimethylhydrazine (ISO)

17alpha-ethynylestradiol (EXP,ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2-methylcholine (ISO)

3,4-methylenedioxymethamphetamine (ISO)

3-isobutyl-1-methyl-7H-xanthine (ISO)

4-amino-2,6-dinitrotoluene (EXP)

4-hydroxyphenyl retinamide (ISO)

aflatoxin B1 (ISO)

Aflatoxin B2 alpha (ISO)

aristolochic acid A (ISO)

arsane (ISO)

arsenic atom (ISO)

benzo[a]pyrene (ISO)

bisphenol A (EXP)

bisphenol F (ISO)

Butylbenzyl phthalate (ISO)

C60 fullerene (EXP)

cadmium atom (ISO)

cadmium dichloride (ISO)

carbon nanotube (ISO)

CGP 52608 (ISO)

chlorpyrifos (ISO)

dexamethasone (ISO)

Dibutyl phosphate (ISO)

dicrotophos (ISO)

dorsomorphin (ISO)

doxorubicin (ISO)

fenofibrate (ISO)

fenthion (ISO)

formaldehyde (ISO)

FR900359 (ISO)

gentamycin (EXP)

indometacin (ISO)

mercury dibromide (ISO)

methidathion (ISO)

methoxychlor (EXP)

methylmercury chloride (ISO)

oxaliplatin (EXP)

panobinostat (ISO)

paracetamol (EXP)

pentanal (ISO)

phenylmercury acetate (ISO)

Salinomycin (ISO)

SB 431542 (ISO)

silicon dioxide (ISO)

sodium arsenite (ISO)

succimer (ISO)

tamoxifen (EXP,ISO)

testosterone (ISO)

testosterone enanthate (ISO)

thiram (ISO)

titanium dioxide (ISO)

topotecan (EXP)

trichostatin A (ISO)

triphenyl phosphate (ISO)

triptonide (ISO)

troglitazone (ISO)

urethane (ISO)

valproic acid (ISO)

vinclozolin (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

protein autoubiquitination (ISO)

protein ubiquitination (IBA)

regulation of megakaryocyte differentiation (ISO)

ubiquitin-dependent protein catabolic process (ISO)

Cellular Component

CCR4-NOT complex (IBA,IEA,ISO)

cytoplasm (IEA)

cytosol (IEA)

nucleus (IEA)

Molecular Function

metal ion binding (IEA)

nucleic acid binding (IEA)

protein binding (ISO)

RNA binding (IEA)

transferase activity (IEA)

ubiquitin protein ligase activity (IEA)

ubiquitin-protein transferase activity (IBA,IEA,ISO)

zinc ion binding (IEA)

Molecular Pathway Annotations Click to see Annotation Detail View

RNA degradation pathway (IEA)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
3.	KEGG Annotation Import Pipeline	Pipeline to import KEGG annotations from KEGG into RGD
4.	GOA pipeline	RGD automated data pipeline
5.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
6.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:12477932	PMID:15001359	PMID:19558367	PMID:22681889	PMID:26575292

Genomics

Comparative Map Data

Cnot4
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	4	64,679,903 - 64,781,432 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	4	64,679,904 - 64,738,083 (-)	Ensembl				GRCr8
mRatBN7.2	4	63,712,770 - 63,814,355 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	4	63,712,770 - 63,814,360 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	4	68,670,159 - 68,772,137 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	4	64,585,781 - 64,687,763 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	4	62,988,285 - 63,090,269 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	4	62,561,443 - 62,663,225 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	4	62,561,444 - 62,663,200 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	4	62,288,219 - 62,389,530 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	4	62,437,688 - 62,548,524 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	4	58,760,849 - 58,862,549 (-)	NCBI		Celera
RGSC_v3.1	4	62,713,823 - 62,824,684 (-)	NCBI
Cytogenetic Map	4	q22	NCBI

CNOT4
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	7	135,361,795 - 135,510,102 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	7	135,361,795 - 135,510,145 (-)	Ensembl			hg38	GRCh38
GRCh37	7	135,046,547 - 135,194,850 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	7	134,697,089 - 134,845,391 (-)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	7	134,503,807 - 134,652,106	NCBI
Celera	7	129,783,984 - 129,932,315 (-)	NCBI		Celera
Cytogenetic Map	7	q33	NCBI
HuRef	7	129,349,392 - 129,497,731 (-)	NCBI		HuRef
CHM1_1	7	134,980,486 - 135,128,729 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	7	136,669,704 - 136,817,325 (-)	NCBI		T2T-CHM13v2.0
CRA_TCAGchr7v2	7	134,390,899 - 134,539,206 (-)	NCBI

Cnot4
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	6	34,999,000 - 35,110,646 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	6	34,999,000 - 35,110,659 (-)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	6	35,022,065 - 35,133,754 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	6	35,022,065 - 35,133,724 (-)	Ensembl			mm10	GRCm38
MGSCv37	6	34,972,065 - 35,083,737 (-)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	6	34,975,328 - 35,063,867 (-)	NCBI		MGSCv36	mm8
Celera	6	35,022,503 - 35,134,275 (-)	NCBI		Celera
Cytogenetic Map	6	B1	NCBI
cM Map	6	15.2	NCBI

Cnot4
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955494	7,248,531 - 7,308,346 (+)	Ensembl
ChiLan1.0	NW_004955494	7,190,361 - 7,306,298 (+)	NCBI	ChiLan1.0	ChiLan1.0

CNOT4
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	6	172,183,106 - 172,332,742 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	7	24,193,359 - 24,343,008 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	7	127,327,092 - 127,475,213 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	7	139,828,828 - 139,975,948 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	7	139,828,828 - 139,905,285 (-)	Ensembl			panPan2	panpan1.1

CNOT4
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	16	12,723,243 - 12,860,851 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	16	12,723,346 - 12,859,077 (+)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	16	13,734,951 - 13,871,784 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	16	12,702,062 - 12,839,200 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	16	12,702,085 - 12,839,870 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	16	13,144,566 - 13,282,337 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	16	12,244,411 - 12,381,223 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	16	12,383,220 - 12,520,057 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Cnot4
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405118	18,898,676 - 19,024,237 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936592	195,558 - 321,145 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936592	195,566 - 321,131 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

CNOT4
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	18	13,821,575 - 13,980,529 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	18	13,821,573 - 13,980,533 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	18	14,695,764 - 14,741,710 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

CNOT4
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	21	104,047,184 - 104,188,241 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	21	104,047,034 - 104,188,270 (-)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666072	949,794 - 1,090,172 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Cnot4
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624765	15,658,333 - 15,722,901 (-)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624765	15,658,353 - 15,798,478 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Cnot4
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	6	104,524,035 - 104,625,924 (+)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Cnot4
653 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	149
Count of miRNA genes:	101
Interacting mature miRNAs:	126
Transcripts:	ENSRNOT00000040969
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
5685012	Bmd87	Bone mineral density QTL 87	5.1		tibia mineral mass (VT:1000283)	bone mineral content (CMO:0001554)	4	35113290	80113290	Rat
1358352	Srcrt3	Stress Responsive Cort QTL 3	2.29		blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	4	39431983	123203361	Rat
1549843	Bw53	Body weight QTL 53		0.0001	body mass (VT:0001259)	body weight gain (CMO:0000420)	4	59753119	104753119	Rat
61445	Strs3	Sensitivity to stroke QTL 3	3		cerebrum integrity trait (VT:0010549)	post-insult time to onset of cerebrovascular lesion (CMO:0002343)	4	41400577	86400577	Rat
6893678	Bw108	Body weight QTL 108	2.6	0.006	body mass (VT:0001259)	body weight (CMO:0000012)	4	44425024	89425024	Rat
5685009	Bmd86	Bone mineral density QTL 86	3.7		tibia mineral mass (VT:1000283)	bone mineral density (CMO:0001226)	4	57613242	102613242	Rat
10755501	Bp390	Blood pressure QTL 390	2.5		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	4	27730518	170099664	Rat
1331807	Rf31	Renal function QTL 31	2.988		urine potassium amount (VT:0010539)	urine potassium level (CMO:0000128)	4	40490442	75726188	Rat
634311	Sach7	Saccharin preference QTL 7			taste sensitivity trait (VT:0001986)	saccharin intake volume to total fluid intake volume ratio (CMO:0001601)	4	58079875	82597589	Rat
1358363	Sradr3	Stress Responsive Adrenal Weight QTL 3	6.19		adrenal gland mass (VT:0010420)	both adrenal glands wet weight (CMO:0000164)	4	58817672	103817672	Rat
61330	Eau1	Experimental allergic uveoretinitis QTL 1		0.0003	uvea integrity trait (VT:0010551)	experimental autoimmune uveitis score (CMO:0001504)	4	26234499	134199155	Rat
738009	Sach4	Saccharine consumption QTL 4	4.9	0.000016	consumption behavior trait (VT:0002069)	saccharin intake volume to total fluid intake volume ratio (CMO:0001601)	4	60916264	184426481	Rat
631261	Tcas3	Tongue tumor susceptibility QTL 3	6.88		tongue integrity trait (VT:0010553)	number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)	4	11706604	92690519	Rat
6478772	Anxrr49	Anxiety related response QTL 49		0.15488	defecation behavior trait (VT:0010462)	defecation rate (CMO:0000998)	4	64084079	109084079	Rat
61336	Bp21	Blood pressure QTL 21	4.6		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	4	58080146	80212111	Rat
2312569	Pur19	Proteinuria QTL 19	3.4	0.001	urine total protein amount (VT:0000032)	urine total protein excretion rate (CMO:0000756)	4	59836842	104836842	Rat
8655961	Kidm43	Kidney mass QTL 43	18		kidney mass (VT:0002707)	both kidneys wet weight (CMO:0000085)	4	37269577	82269577	Rat
1354612	Foco1	Food consumption QTL 1	8.87		eating behavior trait (VT:0001431)	food intake rate (CMO:0000427)	4	45429897	149763204	Rat
6909128	Pancm4	Pancreatic morphology QTL 4	11.35		pancreas mass (VT:0010144)	pancreas wet weight (CMO:0000626)	4	27862204	126119996	Rat
634344	Hcar7	Hepatocarcinoma resistance QTL 7	7.8		liver integrity trait (VT:0010547)	liver tumorous lesion number (CMO:0001068)	4	61041057	94638356	Rat
2303168	Bp330	Blood pressure QTL 330	4.25	0.017	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	4	5889999	148002343	Rat
61475	Aia2	Adjuvant induced arthritis QTL 2	5.8		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	4	40471453	75939996	Rat
8694439	Bw168	Body weight QTL 168	9.57	0.001	retroperitoneal fat pad mass (VT:0010430)	retroperitoneal fat pad weight to body weight ratio (CMO:0000635)	4	41400603	86400603	Rat
738031	Alc14	Alcohol consumption QTL 14	7.6	0.00003	consumption behavior trait (VT:0002069)	ethanol drink intake rate to body weight ratio (CMO:0001616)	4	60916264	174095838	Rat
8655906	Rf60	Renal function QTL 60	3.8		blood creatinine amount (VT:0005328)	creatinine clearance (CMO:0000765)	4	30448961	82336920	Rat
1576305	Emca6	Estrogen-induced mammary cancer QTL 6	5.8		mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	4	45429709	157555683	Rat
61418	Pia5	Pristane induced arthritis QTL 5	4.5		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	4	63245026	129846354	Rat
631651	Bp124	Blood pressure QTL 124	3		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	4	64209744	109209744	Rat
738016	Alc16	Alcohol consumption QTL 16	3.6	0.00015	consumption behavior trait (VT:0002069)	ethanol drink intake rate to body weight ratio (CMO:0001616)	4	60916264	184426481	Rat
1558651	Swd3	Spike wave discharge measurement QTL 3	4.62	0.000024	brain electrophysiology trait (VT:0010557)	brain spike-and-wave discharge frequency (CMO:0001742)	4	41400577	86400577	Rat
1358203	Stl19	Serum triglyceride level QTL 19	2.8	0.002	blood triglyceride amount (VT:0002644)	serum triglyceride level (CMO:0000360)	4	21925151	66925151	Rat
1354660	Salc1	Saline consumption QTL 1	11.26		drinking behavior trait (VT:0001422)	saline drink intake rate (CMO:0001627)	4	45429897	149763204	Rat
1641833	Alc21	Alcohol consumption QTL 21	8.6	0.0001	drinking behavior trait (VT:0001422)	ethanol drink intake rate (CMO:0001407)	4	57664252	127749483	Rat
1298082	Stresp4	Stress response QTL 4			blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	4	51085655	113588029	Rat
631546	Bp86	Blood pressure QTL 86	3.2		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	4	58079875	92690793	Rat
6478743	Anxrr40	Anxiety related response QTL 40		0.83076	defecation behavior trait (VT:0010462)	defecation rate (CMO:0000998)	4	64084079	109084079	Rat
1300139	Hrtrt6	Heart rate QTL 6	2.85		heart pumping trait (VT:2000009)	heart rate (CMO:0000002)	4	40490442	117737312	Rat
70200	Alc18	Alcohol consumption QTL 18	9.2		drinking behavior trait (VT:0001422)	ethanol intake volume to total fluid intake volume ratio (CMO:0001591)	4	57613339	151163960	Rat
61434	Cia3	Collagen induced arthritis QTL 3	4.8		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	4	63224393	108224393	Rat
7394826	Bw126	Body weight QTL 126		0.002	body mass (VT:0001259)	body weight gain (CMO:0000420)	4	63900458	88813920	Rat
12798520	Anxrr55	Anxiety related response QTL 55	4.45	0.01	locomotor behavior trait (VT:0001392)	number of rearing movements with lid-pushing in an experimental apparatus (CMO:0002715)	4	33538597	116185060	Rat
4889969	Bss96	Bone structure and strength QTL 96	4.9		tibia size trait (VT:0100001)	tibia cortical bone volume (CMO:0001725)	4	57613242	102613242	Rat
2316958	Gluco58	Glucose level QTL 58	10		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	4	12212457	182430611	Rat
4889972	Bss97	Bone structure and strength QTL 97	5.6		tibia size trait (VT:0100001)	tibia total bone volume (CMO:0001724)	4	57613242	102613242	Rat
631671	Iddm11	Insulin dependent diabetes mellitus QTL 11	3.6	0.0012	blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	4	59603319	80216952	Rat
6478684	Anxrr30	Anxiety related response QTL 30		0.00087	defecation behavior trait (VT:0010462)	defecation rate (CMO:0000998)	4	64084079	109084079	Rat

Markers in Region

RH142759

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	4	63,734,787 - 63,735,048 (+)	MAPPER	mRatBN7.2
Rnor_6.0	4	62,583,228 - 62,583,488	NCBI	Rnor6.0
Rnor_5.0	4	62,310,004 - 62,310,264	UniSTS	Rnor5.0
RGSC_v3.4	4	62,459,908 - 62,460,168	UniSTS	RGSC3.4
Celera	4	58,782,861 - 58,783,121	UniSTS
RH 3.4 Map	4	395.5	UniSTS
Cytogenetic Map	4	q22	UniSTS

RH138142

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	4	63,764,160 - 63,764,349 (+)	MAPPER	mRatBN7.2
Rnor_6.0	4	62,612,617 - 62,612,805	NCBI	Rnor6.0
Rnor_5.0	4	62,339,265 - 62,339,453	UniSTS	Rnor5.0
RGSC_v3.4	4	62,491,154 - 62,491,342	UniSTS	RGSC3.4
Celera	4	58,812,317 - 58,812,505	UniSTS
RH 3.4 Map	4	376.0	UniSTS
Cytogenetic Map	4	q22	UniSTS

BQ207046

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	4	63,729,681 - 63,729,845 (+)	MAPPER	mRatBN7.2
Rnor_6.0	4	62,578,116 - 62,578,279	NCBI	Rnor6.0
Rnor_5.0	4	62,304,892 - 62,305,055	UniSTS	Rnor5.0
RGSC_v3.4	4	62,454,802 - 62,454,965	UniSTS	RGSC3.4
Celera	4	58,777,755 - 58,777,918	UniSTS
RH 3.4 Map	4	399.7	UniSTS
Cytogenetic Map	4	q22	UniSTS

ksks430

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	4	63,713,781 - 63,714,050 (+)	MAPPER	mRatBN7.2
Rnor_6.0	4	62,562,455 - 62,562,723	NCBI	Rnor6.0
Rnor_5.0	4	62,289,231 - 62,289,499	UniSTS	Rnor5.0
RGSC_v3.4	4	62,438,700 - 62,438,968	UniSTS	RGSC3.4
Celera	4	58,761,861 - 58,762,128	UniSTS
Cytogenetic Map	4	q22	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	165	91	90	59	92	59	6	356	192	11	144	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001037782	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006236271	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006236272	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006236273	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006236274	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008762777	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063285990	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063285991	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063285992	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063285993	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063285994	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063285995	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063285996	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	BC100152	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473959	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ229935	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000004	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000040969 ⟹ ENSRNOP00000046140

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	4	64,679,904 - 64,738,083 (-)	Ensembl
mRatBN7.2 Ensembl	4	63,712,771 - 63,814,308 (-)	Ensembl
Rnor_6.0 Ensembl	4	62,561,444 - 62,663,200 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000097685 ⟹ ENSRNOP00000079631

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	4	64,703,719 - 64,738,083 (-)	Ensembl
mRatBN7.2 Ensembl	4	63,737,452 - 63,814,360 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000107953 ⟹ ENSRNOP00000087439

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	4	64,679,959 - 64,738,083 (-)	Ensembl
mRatBN7.2 Ensembl	4	63,712,770 - 63,814,360 (-)	Ensembl

RefSeq Acc Id:

NM_001037782 ⟹ NP_001032871

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	64,679,903 - 64,781,432 (-)	NCBI
mRatBN7.2	4	63,712,770 - 63,814,308 (-)	NCBI
Rnor_6.0	4	62,561,443 - 62,663,200 (-)	NCBI
Rnor_5.0	4	62,288,219 - 62,389,530 (-)	NCBI
RGSC_v3.4	4	62,437,688 - 62,548,524 (-)	RGD
Celera	4	58,760,849 - 58,862,549 (-)	RGD

Sequence:

show sequence

AGATGGTGGCCCGTCTAGCCGTGGAACCCACCGAAAGCTGAGAGTCTCTCTCTCAGCCGTAAAG
GTCGGACTCACTGAAGCAGTCAGGCCCGGTTCTGAAGAGTTTTTTCGCCGACTCTCGTTCATTG
GTCTCCTGTGAGGACTCGGCAACGCGTGGAGTCGGCTAAGAGAAAAGCGAGGCAAGGCAGGCGG
GTCTTCAGAGTTCTATATATTAGCTCTCAGTGCTGAATTACCTTCTCCCTTAAATTATTATAAA
CTTTTGCTGCTGTCAAATAAACGTGAAAATGTCTCGCAGTCCTGATGCAAAGGAAGACCCTGTG
GAATGCCCTCTTTGCATGGAGCCCTTGGAAATAGACGATATTAACTTTTTCCCTTGCACCTGTG
GCTACCAGATTTGCCGATTTTGTTGGCATCGAATCCGCACTGATGAGAATGGGCTTTGTCCTGC
ATGTAGAAAGCCATATCCAGAAGACCCAGCAGTTTATAAACCACTTTCCCAGGAAGAATTGCAA
AGGATAAAGAATGAGAAAAAACAGAAACAAAATGAGAGAAAACAGAAAATCTCAGAAAATCGAA
AACATTTGGCTAGTGTACGTGTTGTACAAAAAAACCTTGTATTTGTCGTAGGTCTGTCACAGCG
CCTAGCAGACCCAGAAGTTTTAAAACGACCAGAGTATTTTGGGAAGTTTGGTAAAATACATAAA
GTTGTCATCAATAATAGCACATCATATGCAGGCTCACAGGGTCCGAGTGCCAGTGCTTATGTAA
CCTATATCCGGTCAGAAGATGCTCTCAGAGCAATACAGTGTGTCAACAATGTGGTGGTAGATGG
CAGGACACTAAAGGCATCCTTAGGCACAACAAAGTACTGCAGCTACTTCCTGAAGAACATGCAG
TGCCCGAAGCCCGACTGCATGTATCTGCACGAACTGGGGGATGAGGCAGCCAGCTTCACCAAGG
AGGAAATGCAGGCGGGTAAGCACCAAGAGTATGAACAGAAGCTCCTCCAAGAATTATATAAATT
AAATCCCAATTTTCTTCAGTTATCTACGGGTTCAGTTGATAAGAATAAGAACAAAGTGACACCA
TTACAAAGCCCCATTGACAAACCTTCAGATTCTCTCAGTATAGGGAATGGTGATAATTCCCAAC
AGATATCTAACAGTGATACGCCTTCACCACCACCTGGTTTATCAAAATCCAATCCTGTCATCCC
CATCAGTTCATCCAATCACAGTGCAAGGTCTCCTTTTGAAGGGGCAGTAACAGAGTCACAGTCA
TTATTCTCAGACAATTTCCGCCACCCCAACCCTATACCAAGTGGGCTTCCTCCTTTTCCCAGCT
CTCCACAGACACCCAGTGATTGGCCTACCGCTCCAGAACCACAGAGCCTCTTCACATCAGAAAC
AATCCCAGTATCATCATCTACAGACTGGCAAGCAGCATTTGGCTTTGGTTCTTCTAAACAGCCA
GAGGATGACTTGGGGTTTGATCCCTTCGATGTTACTCGAAAAGCCTTAGCAGACCTGATTGAGA
AGGAACTATCCGTCCAAGATCAACCTTCCCTTTCTTCCACGTCTCTTCAGAACTCCTCCTCACA
CACTACAAGCGCCAAAGGTCCAGGCTCTGGATTCCTGCACCCTGCTGCACCTGCCAATGCCAAC
TCTCTTAATAGTACCTTTTCAGTCTTGCCACAGAGGTTCCCTCAGTTTCAGCAGCACCGAGCAG
TTTATAATTCGTTCGGTTTTCCAGGCCAGGCAGCCCGCTATCCTTGGATGGCCTTTCCACGCAA
TAGCATCATGCACTTGAACCACACAGCAAACCCCACCTCAAATAGTAATTTCTTGGACTTGAAT
CTCCCGCCACAGCACAACACAGGTCTGGGAGGGATCCCCATAGCAGACAACAACAGTTCTGTAG
AGAGTTTAAATATGAAGGAATGGCAGGACGGGCTAAGGGCACTTCTACCCAACATTAACATCAA
CTTTGGTGGACTGCCCAATTCTTCTTCCCCCTCCAACGCCAACCACAGTGCACCAACGTCCAAC
ACTGCCACCACGGACAGCGTGAGTTGGGACAGCCCTGGCAGCTGGACAGACCCAGCCATCATCA
CAGGTATTCCAGCCTCTTCAGGAAACACTTTAGACTCTATTCAAGACGACAATCCTCCACACTG
GCTAAAATCCCTTCAGGCCCTCACAGAGGTGGACGGCCCCAGCGCTGCCTCGCCACAGCCCCAC
CACAGCGCCCCCTTCAGCACACAGATCCCTCTGCACAGAGCCAGTTGGAACCCCTACCCACCTC
CTTCAAATCCTTCCAGCTTCCACTCCCCACCCCCAGGCTTCCAGACAGCCTTCAGACCCCCCAG
CAAAACCCCCACAGACCTGCTACAGAGTTCAACACTGGACCGCCACTAAGCAGAGAGGGATTGA
AAAGGGCAGGATTTGTCCCACCCTGTTCTCCCCTCAGCCCACTCACAGCCCCCTTCTCATCTCT
TACGTTCTGAAGAATCCAGTTCCTGATCGGTTTTTTTTTCTCCCCGCCCCCAGATGCGATTCGA
TCACAGCGTCTTTACCACCTTTTCTTTAATTGTAAAAAGTTTCCGTTGGTCCAGCATCTGAGTG
AGTGACACTGTTGAACCTTTCTGGGGGAAATTGCCTTTTTAAGCAGAGGAAAAAGAAAATCAAA
AGGCGGTCTCAATACTTAGAAAATTACTGTTTGTCTGTCACTCATAATGCCATAATCTGCTTAG
CAGAAAATGACAGTTAATCTATAGGAAAGGTCAAGTAAATGTGTTATCAACTGCAGACTTGAGA
ACCAGGCTGATTTAAATGAGATTGCTAAATTCTTGGGGGAAAGCAGTGGTCCTGGCTTCCGTCT
TGCATTCAGCTTTTCACTATTGCAGGGAAACGCTTTCAATTTTAAATTCTTTATTGAATTGATG
GGGAGGACTCAATTGTGTTGTTAAGCAAAGGGATTTATTGGAAGTTGATGACAAGATAAATTGA
TCTGTAGTAGTAACTGGCCTATTGCTAAAGAGTTTATAAGGAGGGAGAAGTAATTTTTTAAGGA
GAAAAAATTTTGGCTTTAGACTTAAATTCAGATGTTTTAAAAGAAAAAAATATTCACAAATTTA
ATACCTATCCTTATGAGAGCTGAATTATACGTGATTTCCTCAGTCTTTCTCCTCTGTCAGAATC
TTTTCTTCCTTTGACCATAAGTCCATCTGACAGGGCATTGTGAGCCAGCACTGCCCTGGGGCCA
CCGATCACCCACAGGAGCAAATCTCTGCCCTCCTTGCCTGCCGCTTTTCCTTAACCCTGTAGTT
CCGGACGTTTGTGCAGTATTGAAAAGACAGGAGAAAAGAAAACAAACCTGGTTATAACCTGATG
CTAAAACTAAAAACAAGGAAATGTACCTCTTTCTTCAGAATTAAAACTAAAATCTTAAATAAAA
CAGAAAACTTGATGGTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_006236271 ⟹ XP_006236333

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	64,679,903 - 64,781,377 (-)	NCBI
mRatBN7.2	4	63,712,770 - 63,814,335 (-)	NCBI
Rnor_6.0	4	62,561,443 - 62,663,223 (-)	NCBI
Rnor_5.0	4	62,288,219 - 62,389,530 (-)	NCBI

Sequence:

show sequence

CGGAGGAGTCTTACCCTAATGTAAGATGGTGGCCCGTCTAGCCGTGGAACCCACCGAAAGCTGA
GAGTCTCTCTCTCAGCCGTAAAGGTCGGACTCACTGAAGCAGTCAGGCCCGGTTCTGAAGAGTT
TTTTCGCCGACTCTCGTTCATTGGTCTCCTGTGAGGACTCGGCAACGCGTGGAGTCGGCTAAGA
GAAAAGCGAGGCAAGGCAGGCGGGTCTTCAGAGTTCTATATATTAGCTCTCAGTGCTGAATTAC
CTTCTCCCTTAAATTATTATAAACTTTTGCTGCTGTCAAATAAACGTGAAAATGTCTCGCAGTC
CTGATGCAAAGGAAGACCCTGTGGAATGCCCTCTTTGCATGGAGCCCTTGGAAATAGACGATAT
TAACTTTTTCCCTTGCACCTGTGGCTACCAGATTTGCCGATTTTGTTGGCATCGAATCCGCACT
GATGAGAATGGGCTTTGTCCTGCATGTAGAAAGCCATATCCAGAAGACCCAGCAGTTTATAAAC
CACTTTCCCAGGAAGAATTGCAAAGGATAAAGAATGAGAAAAAACAGAAACAAAATGAGAGAAA
ACAGAAAATCTCAGAAAATCGAAAACATTTGGCTAGTGTACGTGTTGTACAAAAAAACCTTGTA
TTTGTCGTAGGTCTGTCACAGCGCCTAGCAGACCCAGAAGTTTTAAAACGACCAGAGTATTTTG
GGAAGTTTGGTAAAATACATAAAGTTGTCATCAATAATAGCACATCATATGCAGGCTCACAGGG
TCCGAGTGCCAGTGCTTATGTAACCTATATCCGGTCAGAAGATGCTCTCAGAGCAATACAGTGT
GTCAACAATGTGGTGGTAGATGGCAGGACACTAAAGGCATCCTTAGGCACAACAAAGTACTGCA
GCTACTTCCTGAAGAACATGCAGTGCCCGAAGCCCGACTGCATGTATCTGCACGAACTGGGGGA
TGAGGCAGCCAGCTTCACCAAGGAGGAAATGCAGGCGGGTAAGCACCAAGAGTATGAACAGAAG
CTCCTCCAAGAATTATATAAATTAAATCCCAATTTTCTTCAGTTATCTACGGGTTCAGTTGATA
AGAATAAGAACAAAGTGACACCATTACAAAGCCCCATTGACAAACCTTCAGATTCTCTCAGTAT
AGGGAATGGTGATAATTCCCAACAGATATCTAACAGTGATACGCCTTCACCACCACCTGGTTTA
TCAAAATCCAATCCTGTCATCCCCATCAGTTCATCCAATCACAGTGCAAGGTCTCCTTTTGAAG
GGGCAGTAACAGAGTCACAGTCATTATTCTCAGACAATTTCCGCCACCCCAACCCTATACCAAG
TGGGCTTCCTCCTTTTCCCAGCTCTCCACAGACACCCAGTGATTGGCCTACCGCTCCAGAACCA
CAGAGCCTCTTCACATCAGAAACAATCCCAGTATCATCATCTACAGACTGGCAAGCAGCATTTG
GCTTTGGTTCTTCTAAACAGCCAGAGGATGACTTGGGGTTTGATCCCTTCGATGTTACTCGAAA
AGCCTTAGCAGACCTGATTGAGAAGGAACTATCCGTCCAAGATCAACCTTCCCTTTCTTCCACG
TCTCTTCAGAACTCCTCCTCACACACTACAAGCGCCAAAGGTCCAGGCTCTGGATTCCTGCACC
CTGCTGCACCTGCCAATGCCAACTCTCTTAATAGTACCTTTTCAGTCTTGCCACAGAGGTTCCC
TCAGTTTCAGCAGCACCGAGCAGTTTATAATTCGTTCGGTTTTCCAGGCCAGGCAGCCCGCTAT
CCTTGGATGGCCTTTCCACGCAATAGCATCATGCACTTGAACCACACAGCAAACCCCACCTCAA
ATAGTAATTTCTTGGACTTGAATCTCCCGCCACAGCACAACACAGGTCTGGGAGGGATCCCCAT
AGCAGGTATTCCAGCCTCTTCAGGAAACACTTTAGACTCTATTCAAGACGACAATCCTCCACAC
TGGCTAAAATCCCTTCAGGCCCTCACAGAGGTGGACGGCCCCAGCGCTGCCTCGCCACAGCCCC
ACCACAGCGCCCCCTTCAGCACACAGATCCCTCTGCACAGAGCCAGTTGGAACCCCTACCCACC
TCCTTCAAATCCTTCCAGCTTCCACTCCCCACCCCCAGGCTTCCAGACAGCCTTCAGACCCCCC
AGCAAAACCCCCACAGACCTGCTACAGAGTTCAACACTGGACCGCCACTAAGCAGAGAGGGATT
GAAAAGGGCAGGATTTGTCCCACCCTGTTCTCCCCTCAGCCCACTCACAGCCCCCTTCTCATCT
CTTACGTTCTGAAGAATCCAGTTCCTGATCGGTTTTTTTTTCTCCCCGCCCCCAGATGCGATTC
GATCACAGCGTCTTTACCACCTTTTCTTTAATTGTAAAAAGTTTCCGTTGGTCCAGCATCTGAG
TGAGTGACACTGTTGAACCTTTCTGGGGGAAATTGCCTTTTTAAGCAGAGGAAAAAGAAAATCA
AAAGGCGGTCTCAATACTTAGAAAATTACTGTTTGTCTGTCACTCATAATGCCATAATCTGCTT
AGCAGAAAATGACAGTTAATCTATAGGAAAGGTCAAGTAAATGTGTTATCAACTGCAGACTTGA
GAACCAGGCTGATTTAAATGAGATTGCTAAATTCTTGGGGGAAAGCAGTGGTCCTGGCTTCCGT
CTTGCATTCAGCTTTTCACTATTGCAGGGAAACGCTTTCAATTTTAAATTCTTTATTGAATTGA
TGGGGAGGACTCAATTGTGTTGTTAAGCAAAGGGATTTATTGGAAGTTGATGACAAGATAAATT
GATCTGTAGTAGTAACTGGCCTATTGCTAAAGAGTTTATAAGGAGGGAGAAGTAATTTTTTAAG
GAGAAAAAATTTTGGCTTTAGACTTAAATTCAGATGTTTTAAAAGAAAAAAATATTCACAAATT
TAATACCTATCCTTATGAGAGCTGAATTATACGTGATTTCCTCAGTCTTTCTCCTCTGTCAGAA
TCTTTTCTTCCTTTGACCATAAGTCCATCTGACAGGGCATTGTGAGCCAGCACTGCCCTGGGGC
CACCGATCACCCACAGGAGCAAATCTCTGCCCTCCTTGCCTGCCGCTTTTCCTTAACCCTGTAG
TTCCGGACGTTTGTGCAGTATTGAAAAGACAGGAGAAAAGAAAACAAACCTGGTTATAACCTGA
TGCTAAAACTAAAAACAAGGAAATGTACCTCTTTCTTCAGAATTAAAACTAAAATCTTAAATAA
AACAGAAAACTTGATGGTGA

hide sequence

RefSeq Acc Id:

XM_006236272 ⟹ XP_006236334

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	64,679,903 - 64,781,377 (-)	NCBI
mRatBN7.2	4	63,712,770 - 63,814,249 (-)	NCBI
Rnor_6.0	4	62,561,443 - 62,663,224 (-)	NCBI
Rnor_5.0	4	62,288,219 - 62,389,530 (-)	NCBI

Sequence:

show sequence

CCGGAGGAGTCTTACCCTAATGTAAGATGGTGGCCCGTCTAGCCGTGGAACCCACCGAAAGCTG
AGAGTCTCTCTCTCAGCCGTAAAGGTCGGACTCACTGAAGCAGTCAGGCCCGGTTCTGAAGAGT
TTTTTCGCCGACTCTCGTTCATTGGTCTCCTGTGAGGACTCGGCAACGCGTGGAGTCGGCTAAG
AGAAAAGCGAGGCAAGGCAGGCGGGTCTTCAGAGTTCTATATATTAGCTCTCAGTGCTGAATTA
CCTTCTCCCTTAAATTATTATAAACTTTTGCTGCTGTCAAATAAACGTGAAAATGTCTCGCAGT
CCTGATGCAAAGGAAGACCCTGTGGAATGCCCTCTTTGCATGGAGCCCTTGGAAATAGACGATA
TTAACTTTTTCCCTTGCACCTGTGGCTACCAGATTTGCCGATTTTGTTGGCATCGAATCCGCAC
TGATGAGAATGGGCTTTGTCCTGCATGTAGAAAGCCATATCCAGAAGACCCAGCAGTTTATAAA
CCACTTTCCCAGGAAGAATTGCAAAGGATAAAGAATGAGAAAAAACAGAAACAAAATGAGAGAA
AACAGAAAATCTCAGAAAATCGAAAACATTTGGCTAGTGTACGTGTTGTACAAAAAAACCTTGT
ATTTGTCGTAGGTCTGTCACAGCGCCTAGCAGACCCAGAAGTTTTAAAACGACCAGAGTATTTT
GGGAAGTTTGGTAAAATACATAAAGTTGTCATCAATAATAGCACATCATATGCAGGCTCACAGG
GTCCGAGTGCCAGTGCTTATGTAACCTATATCCGGTCAGAAGATGCTCTCAGAGCAATACAGTG
TGTCAACAATGTGGTGGTAGATGGCAGGACACTAAAGGCATCCTTAGGCACAACAAAGTACTGC
AGCTACTTCCTGAAGAACATGCAGTGCCCGAAGCCCGACTGCATGTATCTGCACGAACTGGGGG
ATGAGGCAGCCAGCTTCACCAAGGAGGAAATGCAGGCGGGTAAGCACCAAGAGTATGAACAGAA
GCTCCTCCAAGAATTATATAAATTAAATCCCAATTTTCTTCAGTTATCTACGGGTTCAGTTGAT
AAGAATAAGAACAAAGTGACACCATTACAAAGGTATGATGTCCCCATTGACAAACCTTCAGATT
CTCTCAGTATAGGGAATGGTGATAATTCCCAACAGATATCTAACAGTGATACGCCTTCACCACC
ACCTGGTTTATCAAAATCCAATCCTGTCATCCCCATCAGTTCATCCAATCACAGTGCAAGGTCT
CCTTTTGAAGGGGCAGTAACAGAGTCACAGTCATTATTCTCAGACAATTTCCGCCACCCCAACC
CTATACCAAGTGGGCTTCCTCCTTTTCCCAGCTCTCCACAGACACCCAGTGATTGGCCTACCGC
TCCAGAACCACAGAGCCTCTTCACATCAGAAACAATCCCAGTATCATCATCTACAGACTGGCAA
GCAGCATTTGGCTTTGGTTCTTCTAAACAGCCAGAGGATGACTTGGGGTTTGATCCCTTCGATG
TTACTCGAAAAGCCTTAGCAGACCTGATTGAGAAGGAACTATCCGTCCAAGATCAACCTTCCCT
TTCTTCCACGTCTCTTCAGAACTCCTCCTCACACACTACAAGCGCCAAAGGTCCAGGCTCTGGA
TTCCTGCACCCTGCTGCACCTGCCAATGCCAACTCTCTTAATAGTACCTTTTCAGTCTTGCCAC
AGAGGTTCCCTCAGTTTCAGCAGCACCGAGCAGTTTATAATTCGTTCGGTTTTCCAGGCCAGGC
AGCCCGCTATCCTTGGATGGCCTTTCCACGCAATAGCATCATGCACTTGAACCACACAGCAAAC
CCCACCTCAAATAGTAATTTCTTGGACTTGAATCTCCCGCCACAGCACAACACAGGTCTGGGAG
GGATCCCCATAGCAGGTATTCCAGCCTCTTCAGGAAACACTTTAGACTCTATTCAAGACGACAA
TCCTCCACACTGGCTAAAATCCCTTCAGGCCCTCACAGAGGTGGACGGCCCCAGCGCTGCCTCG
CCACAGCCCCACCACAGCGCCCCCTTCAGCACACAGATCCCTCTGCACAGAGCCAGTTGGAACC
CCTACCCACCTCCTTCAAATCCTTCCAGCTTCCACTCCCCACCCCCAGGCTTCCAGACAGCCTT
CAGACCCCCCAGCAAAACCCCCACAGACCTGCTACAGAGTTCAACACTGGACCGCCACTAAGCA
GAGAGGGATTGAAAAGGGCAGGATTTGTCCCACCCTGTTCTCCCCTCAGCCCACTCACAGCCCC
CTTCTCATCTCTTACGTTCTGAAGAATCCAGTTCCTGATCGGTTTTTTTTTCTCCCCGCCCCCA
GATGCGATTCGATCACAGCGTCTTTACCACCTTTTCTTTAATTGTAAAAAGTTTCCGTTGGTCC
AGCATCTGAGTGAGTGACACTGTTGAACCTTTCTGGGGGAAATTGCCTTTTTAAGCAGAGGAAA
AAGAAAATCAAAAGGCGGTCTCAATACTTAGAAAATTACTGTTTGTCTGTCACTCATAATGCCA
TAATCTGCTTAGCAGAAAATGACAGTTAATCTATAGGAAAGGTCAAGTAAATGTGTTATCAACT
GCAGACTTGAGAACCAGGCTGATTTAAATGAGATTGCTAAATTCTTGGGGGAAAGCAGTGGTCC
TGGCTTCCGTCTTGCATTCAGCTTTTCACTATTGCAGGGAAACGCTTTCAATTTTAAATTCTTT
ATTGAATTGATGGGGAGGACTCAATTGTGTTGTTAAGCAAAGGGATTTATTGGAAGTTGATGAC
AAGATAAATTGATCTGTAGTAGTAACTGGCCTATTGCTAAAGAGTTTATAAGGAGGGAGAAGTA
ATTTTTTAAGGAGAAAAAATTTTGGCTTTAGACTTAAATTCAGATGTTTTAAAAGAAAAAAATA
TTCACAAATTTAATACCTATCCTTATGAGAGCTGAATTATACGTGATTTCCTCAGTCTTTCTCC
TCTGTCAGAATCTTTTCTTCCTTTGACCATAAGTCCATCTGACAGGGCATTGTGAGCCAGCACT
GCCCTGGGGCCACCGATCACCCACAGGAGCAAATCTCTGCCCTCCTTGCCTGCCGCTTTTCCTT
AACCCTGTAGTTCCGGACGTTTGTGCAGTATTGAAAAGACAGGAGAAAAGAAAACAAACCTGGT
TATAACCTGATGCTAAAACTAAAAACAAGGAAATGTACCTCTTTCTTCAGAATTAAAACTAAAA
TCTTAAATAAAACAGAAAACTTGATGGTGA

hide sequence

RefSeq Acc Id:

XM_006236273 ⟹ XP_006236335

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	64,702,432 - 64,781,377 (-)	NCBI
mRatBN7.2	4	63,730,189 - 63,814,355 (-)	NCBI
Rnor_6.0	4	62,579,801 - 62,663,222 (-)	NCBI
Rnor_5.0	4	62,288,219 - 62,389,530 (-)	NCBI

Sequence:

show sequence

GGAGGAGTCTTACCCTAATGTAAGATGGTGGCCCGTCTAGCCGTGGAACCCACCGAAAGCTGAG
AGTCTCTCTCTCAGCCGTAAAGGTCGGACTCACTGAAGCAGTCAGGCCCGGTTCTGAAGAGTTT
TTTCGCCGACTCTCGTTCATTGGTCTCCTGTGAGGACTCGGCAACGCGTGGAGTCGGCTAAGAG
AAAAGCGAGGCAAGGCAGGCGGGTCTTCAGAGTTCTATATATTAGCTCTCAGTGCTGAATTACC
TTCTCCCTTAAATTATTATAAACTTTTGCTGCTGTCAAATAAACGTGAAAATGTCTCGCAGTCC
TGATGCAAAGGAAGACCCTGTGGAATGCCCTCTTTGCATGGAGCCCTTGGAAATAGACGATATT
AACTTTTTCCCTTGCACCTGTGGCTACCAGATTTGCCGATTTTGTTGGCATCGAATCCGCACTG
ATGAGAATGGGCTTTGTCCTGCATGTAGAAAGCCATATCCAGAAGACCCAGCAGTTTATAAACC
ACTTTCCCAGGAAGAATTGCAAAGGATAAAGAATGAGAAAAAACAGAAACAAAATGAGAGAAAA
CAGAAAATCTCAGAAAATCGAAAACATTTGGCTAGTGTACGTGTTGTACAAAAAAACCTTGTAT
TTGTCGTAGGTCTGTCACAGCGCCTAGCAGACCCAGAAGTTTTAAAACGACCAGAGTATTTTGG
GAAGTTTGGTAAAATACATAAAGTTGTCATCAATAATAGCACATCATATGCAGGCTCACAGGGT
CCGAGTGCCAGTGCTTATGTAACCTATATCCGGTCAGAAGATGCTCTCAGAGCAATACAGTGTG
TCAACAATGTGGTGGTAGATGGCAGGACACTAAAGGCATCCTTAGGCACAACAAAGTACTGCAG
CTACTTCCTGAAGAACATGCAGTGCCCGAAGCCCGACTGCATGTATCTGCACGAACTGGGGGAT
GAGGCAGCCAGCTTCACCAAGGAGGAAATGCAGGCGGGTAAGCACCAAGAGTATGAACAGAAGC
TCCTCCAAGAATTATATAAATTAAATCCCAATTTTCTTCAGTTATCTACGGGTTCAGTTGATAA
GAATAAGAACAAAGTGACACCATTACAAAGCCCCATTGACAAACCTTCAGATTCTCTCAGTATA
GGGAATGGTGATAATTCCCAACAGATATCTAACAGTGATACGCCTTCACCACCACCTGGTTTAT
CAAAATCCAATCCTGTCATCCCCATCAGTTCATCCAATCACAGTGCAAGGTCTCCTTTTGAAGG
GGCAGTAACAGAGTCACAGTCATTATTCTCAGACAATTTCCGCCACCCCAACCCTATACCAAGT
GGGCTTCCTCCTTTTCCCAGCTCTCCACAGACACCCAGTGATTGGCCTACCGCTCCAGAACCAC
AGAGCCTCTTCACATCAGAAACAATCCCAGTATCATCATCTACAGACTGGCAAGCAGCATTTGG
CTTTGGTTCTTCTAAACAGCCAGAGGATGACTTGGGGTTTGATCCCTTCGATGTTACTCGAAAA
GCCTTAGCAGACCTGATTGAGAAGGAACTATCCGTCCAAGATCAACCTTCCCTTTCTTCCACGT
CTCTTCAGAACTCCTCCTCACACACTACAAGCGCCAAAGGTCCAGGCTCTGGATTCCTGCACCC
TGCTGCACCTGCCAATGCCAACTCTCTTAATAGTACCTTTTCAGTCTTGCCACAGAGGTTCCCT
CAGTTTCAGCAGCACCGAGCAGTTTATAATTCGTTCGGTTTTCCAGGCCAGGCAGCCCGCTATC
CTTGGATGGCCTTTCCACGCAATAGCATCATGCACTTGAACCACACAGCAAACCCCACCTCAAA
TAGTAATTTCTTGGACTTGAATCTCCCGCCACAGCACAACACAGGTCTGGGAGGGATCCCCATA
GCAGGGGAAGAAGAGGTGAAGGTTTCGACCATGCCACTGTCAGCCTCTTCCCATTCATTACAAC
AAGGACAGCAGCCTACAAGTCTCCACACTACTNTGGCCNATGACACCAGAACTGAGAGGAAAGG
AGAGGATTAGACTCGGGGTGCTTGCATGGGCAACTGGATTTTTGCATGGTTCCTTTCTGACTTT
GCATTTAATGTATACACCCAAAAGAGCCAATATAAACGTTCCTCATGCCGACAACTAGCGTGGA
CCTCGTAGTTGCTAAAGTATTTCTTCATTAGGCCTTTAACATAATTTATTAGCAAAATAATTTT
GCCATTGTTTCTCATGAGTGATACTATTTCTAACTCTTACAAATAAACTTAGAGTACTAATCCC
AGAGGAGATTAGCTAGACCTGTTCTTATTTTGACTATTGGAAATATACAAAAGTAATGGTAGTC
CTTTGTTTTTTGGTTTGTGGAAAAAAATGGTAATATTCTAATCTACTCCTGAAATTTTTGAAAC
ATTAAGATAATGTCTATTGCATTCGTTGAATTCTTGAAAAGAAAGAATACATATAAAACAAAAC
TGGTGGTGTCATTTAATGCTCAGAAAGATGTTGTCAGCTGTTGTTTTTAGTTGCCTAGATTTAT
ATCCTATATTATGCATTACATGTATACAAACTGTTTTGTTCTTTCTCATTGCACATTTGCACTT
TTCTTTTTGAATGGTTGTTAATTATACATAGATGGTTAAAAGGTAATATTATGGCCTAAATGCA
ATATCATCTGATTTCTAATGCACTGCCTAGTATACCAGGAAATGCCTCAAAAACAGAATTTCAA
CTTGTAGTTGAGTTATTAGAAACTTGAACATGGGATAACATCATATGTAAGTAGTAGCCATAGT
AGTGTAACATTTTTATTGAGCAAGCAGTAGTTCAGTAAGATCTGTTTGGAAATTTCATTGTTTA
ATAATTGACATGTGATAAAAGTAACTGGCCAGAATAAGACTTACAATAGAAGAAAGAAGCTGGG
TGTTCTGTAAAGTGAGACCGTATAAGTTGTAATAGATAACCTTAGATGATCAGAGGACAGGGGA
CATAAGGCATAATGTAAAGTGATGCTTTTGATAATGCAAAACTTCTTGGAATAGTTTAAAAAAT
GATAATAAAAAATAAATTGAACTTAGTTCTGAGCAGTGGACAAAATCTGACTTTAAAAAAAAAA
CATTACCATAATTTGCCCAAAAGCATCTGAGGAGAAAGAGAAAGCCAGACTTGAGATTTAAAAA
CAAAAAGTTTAAAAAGTATGCCTTAATTTGTTTAAAAAAAAAACATGAAAAGCGTACTGTGAAT
ACCAAAAAGAAATCTTAATAATACTACTAATAAAGCATCTTACTTGAAGATGACGCTAATGCTA
TACAGCACTGGCATTTTTGGGTTGTTTTTTAATATAAAATGTGGGAACTTCCTGTTACATAGAA
CAAAATAAATGCCTTCACTTGAGGTACAGTGGAGTAAAGTGGAAGTTTATCCTTACACTTTTTA
AAATTTGGTTGACCACTTTTAAAACTGATCAATTCTCTACCCATCTAAGTTATATATTTAGAGT
TCAACATAAATATCAATTTCTAGCCTGCATTTGAAAGTGAGTTTACAGCAACATTATAAGAAAA
CCACTGTCTTAGAAAATATCAGAACAATACTGTACACTTATTAAACTTCAGCCCTTTAATCAGA
CCTTAATTCAATTATGGGTTTCATTTGACCATAACAGGTCAAGATTTGTGTGTGTTGTGTGGCT
AAGGCTTTTGGGCTTGTCACCGGAAATGTGGCTTCTTGTAATGATGCTCATTGGAGCTTAGCTT
TCTCCAGCGTTCATTGGCTCCCTCCTCTCACAAGCGCACAGAGGATGATTGGCTCCCATTTATC
CTACACTGCTGCGTTGTGAGGGATGCTGCTGAGCAAAGCTTCTTTCCTTGTCTTTCTCTGTTCT
TTTTCATTCATGATTTCTATAGAAAATTTGTCCCAAGTTTTCCTAGACTTGCTCATAGTCCCCA
GTAAGAATCCCAAAGCTGTCTCCCTTCTGTCTGTCCTCCCTCTACTTCTGACGTACCATGAATT
TGGGAAATACTTTTTAGGCAATTAGAACTTAGCATTACAATTTCTATAAAGTGCTTAAAAACTT
ACTTTTAAGTCATTTTTTGTTTTGTTTTTTTTGTTTGTTTTTATTATTTCTAGACCCCATAAGG
CCTTACCTTTTTATTTAATGCAGTCCTTTTAATTAGAAGTCCTTAAAAGTCAGAATTTATGTTA
ATGCATGGAAGAAATTATAGAGTATATAAAAATACTATTTTATGTGATGGACAAATTAATTAAA
ATGGTGAGAAATTCTAAGAAACTTCAGGTTTGTCAATACATTCTTGTATGATGCATCCTACACT
GGGATACTTCTTAATATAGTTTTTACTTCTTTGACTATTACAAAAGTGACTAGGCTTTTCCTTG
ACACAGGGTTTTTAATCTGGAGTCCCAGACTCTTGGAAGGTCTATATAAAATGGTGGGTTTGTG
TGATTGTGCATTTGTTTTTGTTTTTCTGAGGAAGATCCATAGTTACTAGACTGATAATGAGTTT
GATAGATTTCTCCCTCTCCAAGAGATTCCAAGTGGCTAACACATGACTGCCTGGAGCCCCTGAA
AGAAATAGAGTCCTGCCTTGACAGTTCTGGGATGTGAATTGCTCTCTTATATTCTCAAAGATTT
CAGTGGAGAATGTTTTGAAAAACAATGATTTCCTTCAGCAGTCCTGCAGCAGGGTTCTCCCACA
TTACTTTTGTTTGGTCAGCCCTTGGTACTGTCATCACAGCAGCCACAGCAATCTTGACTCATTC
TATTACCCGTTTCAGCCACTGCTTTGACAGTGGCAGCAAAGAGTGTTAAACACTGACACTTCAG
CTCTAAACTACAAACTGATTTGGAGGGAGATATAAAAAAATAAAAACAAAACACTAGAAAATAC
ATGCTGATCTTTCTATTCTGCATATGTCTGTGCTGTTGTCTCAGCCTCCTGGAAACAGTTATGT
TTTTCAAAAAGTAAGCACTATTAGTGCACTTTTGTCTCTGCATACTGGTACTGACATAGTTTAT
TTATGTGGTATTCCAAGTACCTTCAAAACTGCCAGAACTTTCTTCTGCTCTGGCACAGGTTCAT
AGGGAGGTCCGGCCAGAGAGGAATTGCTGCAGAAAGTCCAGAGAAAGGAAGGCATTATAGGAGC
ATTTGAAATCCCCAAAATTGAGCACTACTGTGTGGTTTGTAAGGTTTTAGATTTTTCTGTTTCT
GTTTCTTTTTGGGGGAGGGGGAATCATGAAATTTTCTCAAACCTGTTTAATTGGTATAAAAGAT
GAAAACATAATAGCAGTGTATATGTGTGCAATAGCCAAAGTCAGATATCTGGTGATCTTAGTAA
ACACTTCTCCCTTGCTGAATGAGTATTCGCTTTGTTTCCTGAGGTCGGAAAGCGGCTATAGTGT
GTGCAGGCATTCACACACGTGTTTAGTGAGCAAATCAGACATTGTGCTAATTTAAAAACAAAAC
AACACGAGTTAGAAAAGGAGCTTGTTTTATAAAACTTTACTTTTGAGGAGGAATTACATTCTGA
GACACTGACCAGAAGGACTGGAAAGTATACCTGAGTGAGGTGCAGGGCTTCAAGGAAGCTAAAG
CCTTGAAAATGAGGAAGAACAATCTGATGGGGTGGATGTGGTAGGGTTTGGCATGGTGTAGTAT
TTTAAGAGAAGTAATTTGGTAAGGTATTTCATTGCAGTTGGAGCAAATTAGAATCCAGTTCCGG
GATGCCATTATTGCCAGTGCAAAAAGATGGCTTGGACTAGAGTAGGTTTGGCTATATTTCTATC
CCCAACCCCTCTATTGCCCTTTCAAATTGCATTAAATGGTCCAAAATAGCAGCTAGATTTAAAA
AAAACACAGAACCAGGATCTTACTGATTGTCATCCTTGAGCACTAAACTGTAGTTTGTGTGAAA
CCTAAAATGCTGACTCACAGCATAGGTGACAAAGTACCTTCCTGGCCGCATGGCTGCGGTGCTG
TTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTTTACT
CTTACTATTATTGTGACAGCTGGCCTCAAACTCAAAGCATTGCAAAAGATGACTTTGTGTTTCT
GATCCTTCTGCCTTCGTCTCCTCAGTTCAGAACACTGGAATTAAGGGCCTTTGTCACCATGCCC
AGTTTTGTGTGATGCTGAACAGCATGCTTTGCCAACTGAGAGCTACATCTTTAACCCCTGTCCC
CATCTCCGTACTTTAAAAGACAGGGTCATTTGTACTCCAGACTGGTCTCATAGTCACCATTCTC
TGTGTATCTCAGCCTCTGAAGTGCTAGGCTTACAGGTCTGCCCCATGACACTCAGCTGAGGAGC
GGAGTCTGCAATGAGGTTTCCTTTAGAGATTTGTGGTATATTTATTTACTAAAGAACTGTGTAA
AGATAGGATTCTGCTTTCACAGGGCCCTGGAATGTGTACTTTCTAAATGATCTTTGGCTTAACA
TAAAGTTCAGGTGTGGGAAAGCAAACAATTAGGAGATTTGAAGGTAAAGAAGATGAAGACAAAT
AAATACAAGGTTACATTAAAATATCCAGTCTAACTGGGTAGGGTGCCATACCCTTTTAATCCCA
GTGCAGAGGCAGGTTGATCCCTGTGGCCAGCCTGGTCTACATAGTGAGTTCCAGGAGTGTCAGG
ACTACATAATCTTGTAGTTGAGTCCATAAGGCATGTCCTGCAAGCCTATGATGTGAGTGATGTG
GAAGGGCAGTCAGTGACAGAGATTCCATGACAGAGAACAGGATAGTGTTCAGTGGATAAGGAGA
TTATTATGCTCAGTGTGATGACCTCAGTGCTGACTGGTGGATGAGAGTCAGGACAAGTAGTGGA
TTGTATGGTTGGGAGAACAGCTAGCTTTTGTAACCCCTATGTGGTCTCTACCCTCTTTTCCTCC
AGTCTTTCTTTTGAGAGTATGGAGTAGATCTGGACTCTTGAGAGCATGGTGTTGCCTTTAGAAT
CTCAAGTCTGCTTTTCTCCAAGTTGAAATGATGCAAAGGCAGATTTCTGAAAGAGGGCGTAGGA
GAAGGACTGGGGAGGGCCTGGGAAAGCCAGCAATGAGATGTGTCCGGCTTGAGCAAGCTTGGTA
TGTGCAAAGGAGCTGTCATGTCTGAAAGGGTTAGCAGAGAGTAGATGCGGAGCAGGATGAGTCT
GTTAAAGAGCCCATTGCAAAACCAGGTGCCCTGTTTCAGAAGCAAACTAGAAAGCCCCAGCATA
TGCTCTCTACTTAAGAAGAGAGATACTCCACACAGCTGGGTTAGCTTCTCGACGATGGTGAAAT
GTGAGAGTTGTCGCACACTCCTGCAGTCCAGCGTTCAAAGAAAGATTCTGCTTTATATAGCAAG
TTAAGAGCACAGCAGTGGAGTAGAGAGACCTTAACAGTTCACCATAAAACACAGTAAAGGTATT
TTGGTAATTTTCCTCCAATGAGATTCTACTGTATGAACAAATTAAACCTAGATTTCTGGGGGGC
TAATATATTTAACTGTTATATTTTATATCCTTAGGTGGATACCCTTTATGAAAAGTTGCTGAAG
TGTAGTAAGTGGATCGGGAGTGAGGGTGTATGTGTCTCCATCTAGTTAATAGCAAATATCCTAC
TTTGGAAGCAGCCTTAGTTTTCCTGAATGAATGTTTTTTAAATTAGATAGATTTGCTTCTGTAT
GGTATAGGATGAATGTCAGCTTTGTCTTACTGATCAACAATAGTAATTTATGAAACCATTTGAA
TGGAGAGAACACTGTTCTTGGCCCTCCTTACTAGTCTGAGATTTGACTCTAGGAGAATTAATGC
TACTATCTTAGTTTCATTTCTACTGCTCTGATAAAATACCCTGAAAAAGCAGCGTAGGAAGTGG
GGGTGGGTTGTTTGTGCTCACAATTCTAAGCTAAAGCTTATCACGTGGGGCAGTTAGAGTCCAA
TGGCCTGTGACTGCTGTCACATTTACCATGGTTAAGAAGCACAGGGAGGAGTTAACCATACATG
TTATGCCCAGCTAGCTCTCTCCATTTTTACACTCTCCAGTACAGCTCTCGGGGAATGGTGCTTC
CTACTTTTTCATTAGAGTTTCCCCCACCAGTTAATGTAATCTAAAGAATCCCCCAGCGATGAGT
TCGCAGGCCAAACTGATCTAGATATACCCTCACTGAGACTCTTGCCTGGCTGACTT

hide sequence

RefSeq Acc Id:

XM_006236274 ⟹ XP_006236336

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	64,702,432 - 64,781,377 (-)	NCBI
mRatBN7.2	4	63,730,189 - 63,814,249 (-)	NCBI
Rnor_6.0	4	62,579,801 - 62,663,222 (-)	NCBI
Rnor_5.0	4	62,288,219 - 62,389,530 (-)	NCBI

Sequence:

show sequence

GGAGGAGTCTTACCCTAATGTAAGATGGTGGCCCGTCTAGCCGTGGAACCCACCGAAAGCTGAG
AGTCTCTCTCTCAGCCGTAAAGGTCGGACTCACTGAAGCAGTCAGGCCCGGTTCTGAAGAGTTT
TTTCGCCGACTCTCGTTCATTGGTCTCCTGTGAGGACTCGGCAACGCGTGGAGTCGGCTAAGAG
AAAAGCGAGGCAAGGCAGGCGGGTCTTCAGAGTTCTATATATTAGCTCTCAGTGCTGAATTACC
TTCTCCCTTAAATTATTATAAACTTTTGCTGCTGTCAAATAAACGTGAAAATGTCTCGCAGTCC
TGATGCAAAGGAAGACCCTGTGGAATGCCCTCTTTGCATGGAGCCCTTGGAAATAGACGATATT
AACTTTTTCCCTTGCACCTGTGGCTACCAGATTTGCCGATTTTGTTGGCATCGAATCCGCACTG
ATGAGAATGGGCTTTGTCCTGCATGTAGAAAGCCATATCCAGAAGACCCAGCAGTTTATAAACC
ACTTTCCCAGGAAGAATTGCAAAGGATAAAGAATGAGAAAAAACAGAAACAAAATGAGAGAAAA
CAGAAAATCTCAGAAAATCGAAAACATTTGGCTAGTGTACGTGTTGTACAAAAAAACCTTGTAT
TTGTCGTAGGTCTGTCACAGCGCCTAGCAGACCCAGAAGTTTTAAAACGACCAGAGTATTTTGG
GAAGTTTGGTAAAATACATAAAGTTGTCATCAATAATAGCACATCATATGCAGGCTCACAGGGT
CCGAGTGCCAGTGCTTATGTAACCTATATCCGGTCAGAAGATGCTCTCAGAGCAATACAGTGTG
TCAACAATGTGGTGGTAGATGGCAGGACACTAAAGGCATCCTTAGGCACAACAAAGTACTGCAG
CTACTTCCTGAAGAACATGCAGTGCCCGAAGCCCGACTGCATGTATCTGCACGAACTGGGGGAT
GAGGCAGCCAGCTTCACCAAGGAGGAAATGCAGGCGGGTAAGCACCAAGAGTATGAACAGAAGC
TCCTCCAAGAATTATATAAATTAAATCCCAATTTTCTTCAGTTATCTACGGGTTCAGTTGATAA
GAATAAGAACAAAGTGACACCATTACAAAGGTATGATGTCCCCATTGACAAACCTTCAGATTCT
CTCAGTATAGGGAATGGTGATAATTCCCAACAGATATCTAACAGTGATACGCCTTCACCACCAC
CTGGTTTATCAAAATCCAATCCTGTCATCCCCATCAGTTCATCCAATCACAGTGCAAGGTCTCC
TTTTGAAGGGGCAGTAACAGAGTCACAGTCATTATTCTCAGACAATTTCCGCCACCCCAACCCT
ATACCAAGTGGGCTTCCTCCTTTTCCCAGCTCTCCACAGACACCCAGTGATTGGCCTACCGCTC
CAGAACCACAGAGCCTCTTCACATCAGAAACAATCCCAGTATCATCATCTACAGACTGGCAAGC
AGCATTTGGCTTTGGTTCTTCTAAACAGCCAGAGGATGACTTGGGGTTTGATCCCTTCGATGTT
ACTCGAAAAGCCTTAGCAGACCTGATTGAGAAGGAACTATCCGTCCAAGATCAACCTTCCCTTT
CTTCCACGTCTCTTCAGAACTCCTCCTCACACACTACAAGCGCCAAAGGTCCAGGCTCTGGATT
CCTGCACCCTGCTGCACCTGCCAATGCCAACTCTCTTAATAGTACCTTTTCAGTCTTGCCACAG
AGGTTCCCTCAGTTTCAGCAGCACCGAGCAGTTTATAATTCGTTCGGTTTTCCAGGCCAGGCAG
CCCGCTATCCTTGGATGGCCTTTCCACGCAATAGCATCATGCACTTGAACCACACAGCAAACCC
CACCTCAAATAGTAATTTCTTGGACTTGAATCTCCCGCCACAGCACAACACAGGTCTGGGAGGG
ATCCCCATAGCAGGGGAAGAAGAGGTGAAGGTTTCGACCATGCCACTGTCAGCCTCTTCCCATT
CATTACAACAAGGACAGCAGCCTACAAGTCTCCACACTACTNTGGCCNATGACACCAGAACTGA
GAGGAAAGGAGAGGATTAGACTCGGGGTGCTTGCATGGGCAACTGGATTTTTGCATGGTTCCTT
TCTGACTTTGCATTTAATGTATACACCCAAAAGAGCCAATATAAACGTTCCTCATGCCGACAAC
TAGCGTGGACCTCGTAGTTGCTAAAGTATTTCTTCATTAGGCCTTTAACATAATTTATTAGCAA
AATAATTTTGCCATTGTTTCTCATGAGTGATACTATTTCTAACTCTTACAAATAAACTTAGAGT
ACTAATCCCAGAGGAGATTAGCTAGACCTGTTCTTATTTTGACTATTGGAAATATACAAAAGTA
ATGGTAGTCCTTTGTTTTTTGGTTTGTGGAAAAAAATGGTAATATTCTAATCTACTCCTGAAAT
TTTTGAAACATTAAGATAATGTCTATTGCATTCGTTGAATTCTTGAAAAGAAAGAATACATATA
AAACAAAACTGGTGGTGTCATTTAATGCTCAGAAAGATGTTGTCAGCTGTTGTTTTTAGTTGCC
TAGATTTATATCCTATATTATGCATTACATGTATACAAACTGTTTTGTTCTTTCTCATTGCACA
TTTGCACTTTTCTTTTTGAATGGTTGTTAATTATACATAGATGGTTAAAAGGTAATATTATGGC
CTAAATGCAATATCATCTGATTTCTAATGCACTGCCTAGTATACCAGGAAATGCCTCAAAAACA
GAATTTCAACTTGTAGTTGAGTTATTAGAAACTTGAACATGGGATAACATCATATGTAAGTAGT
AGCCATAGTAGTGTAACATTTTTATTGAGCAAGCAGTAGTTCAGTAAGATCTGTTTGGAAATTT
CATTGTTTAATAATTGACATGTGATAAAAGTAACTGGCCAGAATAAGACTTACAATAGAAGAAA
GAAGCTGGGTGTTCTGTAAAGTGAGACCGTATAAGTTGTAATAGATAACCTTAGATGATCAGAG
GACAGGGGACATAAGGCATAATGTAAAGTGATGCTTTTGATAATGCAAAACTTCTTGGAATAGT
TTAAAAAATGATAATAAAAAATAAATTGAACTTAGTTCTGAGCAGTGGACAAAATCTGACTTTA
AAAAAAAAACATTACCATAATTTGCCCAAAAGCATCTGAGGAGAAAGAGAAAGCCAGACTTGAG
ATTTAAAAACAAAAAGTTTAAAAAGTATGCCTTAATTTGTTTAAAAAAAAAACATGAAAAGCGT
ACTGTGAATACCAAAAAGAAATCTTAATAATACTACTAATAAAGCATCTTACTTGAAGATGACG
CTAATGCTATACAGCACTGGCATTTTTGGGTTGTTTTTTAATATAAAATGTGGGAACTTCCTGT
TACATAGAACAAAATAAATGCCTTCACTTGAGGTACAGTGGAGTAAAGTGGAAGTTTATCCTTA
CACTTTTTAAAATTTGGTTGACCACTTTTAAAACTGATCAATTCTCTACCCATCTAAGTTATAT
ATTTAGAGTTCAACATAAATATCAATTTCTAGCCTGCATTTGAAAGTGAGTTTACAGCAACATT
ATAAGAAAACCACTGTCTTAGAAAATATCAGAACAATACTGTACACTTATTAAACTTCAGCCCT
TTAATCAGACCTTAATTCAATTATGGGTTTCATTTGACCATAACAGGTCAAGATTTGTGTGTGT
TGTGTGGCTAAGGCTTTTGGGCTTGTCACCGGAAATGTGGCTTCTTGTAATGATGCTCATTGGA
GCTTAGCTTTCTCCAGCGTTCATTGGCTCCCTCCTCTCACAAGCGCACAGAGGATGATTGGCTC
CCATTTATCCTACACTGCTGCGTTGTGAGGGATGCTGCTGAGCAAAGCTTCTTTCCTTGTCTTT
CTCTGTTCTTTTTCATTCATGATTTCTATAGAAAATTTGTCCCAAGTTTTCCTAGACTTGCTCA
TAGTCCCCAGTAAGAATCCCAAAGCTGTCTCCCTTCTGTCTGTCCTCCCTCTACTTCTGACGTA
CCATGAATTTGGGAAATACTTTTTAGGCAATTAGAACTTAGCATTACAATTTCTATAAAGTGCT
TAAAAACTTACTTTTAAGTCATTTTTTGTTTTGTTTTTTTTGTTTGTTTTTATTATTTCTAGAC
CCCATAAGGCCTTACCTTTTTATTTAATGCAGTCCTTTTAATTAGAAGTCCTTAAAAGTCAGAA
TTTATGTTAATGCATGGAAGAAATTATAGAGTATATAAAAATACTATTTTATGTGATGGACAAA
TTAATTAAAATGGTGAGAAATTCTAAGAAACTTCAGGTTTGTCAATACATTCTTGTATGATGCA
TCCTACACTGGGATACTTCTTAATATAGTTTTTACTTCTTTGACTATTACAAAAGTGACTAGGC
TTTTCCTTGACACAGGGTTTTTAATCTGGAGTCCCAGACTCTTGGAAGGTCTATATAAAATGGT
GGGTTTGTGTGATTGTGCATTTGTTTTTGTTTTTCTGAGGAAGATCCATAGTTACTAGACTGAT
AATGAGTTTGATAGATTTCTCCCTCTCCAAGAGATTCCAAGTGGCTAACACATGACTGCCTGGA
GCCCCTGAAAGAAATAGAGTCCTGCCTTGACAGTTCTGGGATGTGAATTGCTCTCTTATATTCT
CAAAGATTTCAGTGGAGAATGTTTTGAAAAACAATGATTTCCTTCAGCAGTCCTGCAGCAGGGT
TCTCCCACATTACTTTTGTTTGGTCAGCCCTTGGTACTGTCATCACAGCAGCCACAGCAATCTT
GACTCATTCTATTACCCGTTTCAGCCACTGCTTTGACAGTGGCAGCAAAGAGTGTTAAACACTG
ACACTTCAGCTCTAAACTACAAACTGATTTGGAGGGAGATATAAAAAAATAAAAACAAAACACT
AGAAAATACATGCTGATCTTTCTATTCTGCATATGTCTGTGCTGTTGTCTCAGCCTCCTGGAAA
CAGTTATGTTTTTCAAAAAGTAAGCACTATTAGTGCACTTTTGTCTCTGCATACTGGTACTGAC
ATAGTTTATTTATGTGGTATTCCAAGTACCTTCAAAACTGCCAGAACTTTCTTCTGCTCTGGCA
CAGGTTCATAGGGAGGTCCGGCCAGAGAGGAATTGCTGCAGAAAGTCCAGAGAAAGGAAGGCAT
TATAGGAGCATTTGAAATCCCCAAAATTGAGCACTACTGTGTGGTTTGTAAGGTTTTAGATTTT
TCTGTTTCTGTTTCTTTTTGGGGGAGGGGGAATCATGAAATTTTCTCAAACCTGTTTAATTGGT
ATAAAAGATGAAAACATAATAGCAGTGTATATGTGTGCAATAGCCAAAGTCAGATATCTGGTGA
TCTTAGTAAACACTTCTCCCTTGCTGAATGAGTATTCGCTTTGTTTCCTGAGGTCGGAAAGCGG
CTATAGTGTGTGCAGGCATTCACACACGTGTTTAGTGAGCAAATCAGACATTGTGCTAATTTAA
AAACAAAACAACACGAGTTAGAAAAGGAGCTTGTTTTATAAAACTTTACTTTTGAGGAGGAATT
ACATTCTGAGACACTGACCAGAAGGACTGGAAAGTATACCTGAGTGAGGTGCAGGGCTTCAAGG
AAGCTAAAGCCTTGAAAATGAGGAAGAACAATCTGATGGGGTGGATGTGGTAGGGTTTGGCATG
GTGTAGTATTTTAAGAGAAGTAATTTGGTAAGGTATTTCATTGCAGTTGGAGCAAATTAGAATC
CAGTTCCGGGATGCCATTATTGCCAGTGCAAAAAGATGGCTTGGACTAGAGTAGGTTTGGCTAT
ATTTCTATCCCCAACCCCTCTATTGCCCTTTCAAATTGCATTAAATGGTCCAAAATAGCAGCTA
GATTTAAAAAAAACACAGAACCAGGATCTTACTGATTGTCATCCTTGAGCACTAAACTGTAGTT
TGTGTGAAACCTAAAATGCTGACTCACAGCATAGGTGACAAAGTACCTTCCTGGCCGCATGGCT
GCGGTGCTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGT
TGTTTTACTCTTACTATTATTGTGACAGCTGGCCTCAAACTCAAAGCATTGCAAAAGATGACTT
TGTGTTTCTGATCCTTCTGCCTTCGTCTCCTCAGTTCAGAACACTGGAATTAAGGGCCTTTGTC
ACCATGCCCAGTTTTGTGTGATGCTGAACAGCATGCTTTGCCAACTGAGAGCTACATCTTTAAC
CCCTGTCCCCATCTCCGTACTTTAAAAGACAGGGTCATTTGTACTCCAGACTGGTCTCATAGTC
ACCATTCTCTGTGTATCTCAGCCTCTGAAGTGCTAGGCTTACAGGTCTGCCCCATGACACTCAG
CTGAGGAGCGGAGTCTGCAATGAGGTTTCCTTTAGAGATTTGTGGTATATTTATTTACTAAAGA
ACTGTGTAAAGATAGGATTCTGCTTTCACAGGGCCCTGGAATGTGTACTTTCTAAATGATCTTT
GGCTTAACATAAAGTTCAGGTGTGGGAAAGCAAACAATTAGGAGATTTGAAGGTAAAGAAGATG
AAGACAAATAAATACAAGGTTACATTAAAATATCCAGTCTAACTGGGTAGGGTGCCATACCCTT
TTAATCCCAGTGCAGAGGCAGGTTGATCCCTGTGGCCAGCCTGGTCTACATAGTGAGTTCCAGG
AGTGTCAGGACTACATAATCTTGTAGTTGAGTCCATAAGGCATGTCCTGCAAGCCTATGATGTG
AGTGATGTGGAAGGGCAGTCAGTGACAGAGATTCCATGACAGAGAACAGGATAGTGTTCAGTGG
ATAAGGAGATTATTATGCTCAGTGTGATGACCTCAGTGCTGACTGGTGGATGAGAGTCAGGACA
AGTAGTGGATTGTATGGTTGGGAGAACAGCTAGCTTTTGTAACCCCTATGTGGTCTCTACCCTC
TTTTCCTCCAGTCTTTCTTTTGAGAGTATGGAGTAGATCTGGACTCTTGAGAGCATGGTGTTGC
CTTTAGAATCTCAAGTCTGCTTTTCTCCAAGTTGAAATGATGCAAAGGCAGATTTCTGAAAGAG
GGCGTAGGAGAAGGACTGGGGAGGGCCTGGGAAAGCCAGCAATGAGATGTGTCCGGCTTGAGCA
AGCTTGGTATGTGCAAAGGAGCTGTCATGTCTGAAAGGGTTAGCAGAGAGTAGATGCGGAGCAG
GATGAGTCTGTTAAAGAGCCCATTGCAAAACCAGGTGCCCTGTTTCAGAAGCAAACTAGAAAGC
CCCAGCATATGCTCTCTACTTAAGAAGAGAGATACTCCACACAGCTGGGTTAGCTTCTCGACGA
TGGTGAAATGTGAGAGTTGTCGCACACTCCTGCAGTCCAGCGTTCAAAGAAAGATTCTGCTTTA
TATAGCAAGTTAAGAGCACAGCAGTGGAGTAGAGAGACCTTAACAGTTCACCATAAAACACAGT
AAAGGTATTTTGGTAATTTTCCTCCAATGAGATTCTACTGTATGAACAAATTAAACCTAGATTT
CTGGGGGGCTAATATATTTAACTGTTATATTTTATATCCTTAGGTGGATACCCTTTATGAAAAG
TTGCTGAAGTGTAGTAAGTGGATCGGGAGTGAGGGTGTATGTGTCTCCATCTAGTTAATAGCAA
ATATCCTACTTTGGAAGCAGCCTTAGTTTTCCTGAATGAATGTTTTTTAAATTAGATAGATTTG
CTTCTGTATGGTATAGGATGAATGTCAGCTTTGTCTTACTGATCAACAATAGTAATTTATGAAA
CCATTTGAATGGAGAGAACACTGTTCTTGGCCCTCCTTACTAGTCTGAGATTTGACTCTAGGAG
AATTAATGCTACTATCTTAGTTTCATTTCTACTGCTCTGATAAAATACCCTGAAAAAGCAGCGT
AGGAAGTGGGGGTGGGTTGTTTGTGCTCACAATTCTAAGCTAAAGCTTATCACGTGGGGCAGTT
AGAGTCCAATGGCCTGTGACTGCTGTCACATTTACCATGGTTAAGAAGCACAGGGAGGAGTTAA
CCATACATGTTATGCCCAGCTAGCTCTCTCCATTTTTACACTCTCCAGTACAGCTCTCGGGGAA
TGGTGCTTCCTACTTTTTCATTAGAGTTTCCCCCACCAGTTAATGTAATCTAAAGAATCCCCCA
GCGATGAGTTCGCAGGCCAAACTGATCTAGATATACCCTCACTGAGACTCTTGCCTGGCTGACT
T

hide sequence

RefSeq Acc Id:

XM_063285990 ⟹ XP_063142060

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	64,679,903 - 64,781,377 (-)	NCBI

RefSeq Acc Id:

XM_063285991 ⟹ XP_063142061

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	64,679,903 - 64,781,031 (-)	NCBI

RefSeq Acc Id:

XM_063285992 ⟹ XP_063142062

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	64,679,903 - 64,781,377 (-)	NCBI

RefSeq Acc Id:

XM_063285993 ⟹ XP_063142063

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	64,679,903 - 64,781,377 (-)	NCBI

RefSeq Acc Id:

XM_063285994 ⟹ XP_063142064

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	64,702,432 - 64,781,053 (-)	NCBI

RefSeq Acc Id:

XM_063285995 ⟹ XP_063142065

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	64,702,432 - 64,781,054 (-)	NCBI

RefSeq Acc Id:

XM_063285996 ⟹ XP_063142066

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	64,702,432 - 64,781,377 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_001032871	(Get FASTA)	NCBI Sequence Viewer
	XP_006236333	(Get FASTA)	NCBI Sequence Viewer
	XP_006236334	(Get FASTA)	NCBI Sequence Viewer
	XP_006236335	(Get FASTA)	NCBI Sequence Viewer
	XP_006236336	(Get FASTA)	NCBI Sequence Viewer
	XP_063142060	(Get FASTA)	NCBI Sequence Viewer
	XP_063142061	(Get FASTA)	NCBI Sequence Viewer
	XP_063142062	(Get FASTA)	NCBI Sequence Viewer
	XP_063142063	(Get FASTA)	NCBI Sequence Viewer
	XP_063142064	(Get FASTA)	NCBI Sequence Viewer
	XP_063142065	(Get FASTA)	NCBI Sequence Viewer
	XP_063142066	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAI00153	(Get FASTA)	NCBI Sequence Viewer
	EDM15324	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000046140
	ENSRNOP00000046140.5
	ENSRNOP00000079631
	ENSRNOP00000079631.1
	ENSRNOP00000087439
	ENSRNOP00000087439.1

RefSeq Acc Id:

NP_001032871 ⟸ NM_001037782

- UniProtKB:

Q498M7 (UniProtKB/TrEMBL), F1MAD6 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MSRSPDAKEDPVECPLCMEPLEIDDINFFPCTCGYQICRFCWHRIRTDENGLCPACRKPYPEDP
AVYKPLSQEELQRIKNEKKQKQNERKQKISENRKHLASVRVVQKNLVFVVGLSQRLADPEVLKR
PEYFGKFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQCVNNVVVDGRTLKASLGT
TKYCSYFLKNMQCPKPDCMYLHELGDEAASFTKEEMQAGKHQEYEQKLLQELYKLNPNFLQLST
GSVDKNKNKVTPLQSPIDKPSDSLSIGNGDNSQQISNSDTPSPPPGLSKSNPVIPISSSNHSAR
SPFEGAVTESQSLFSDNFRHPNPIPSGLPPFPSSPQTPSDWPTAPEPQSLFTSETIPVSSSTDW
QAAFGFGSSKQPEDDLGFDPFDVTRKALADLIEKELSVQDQPSLSSTSLQNSSSHTTSAKGPGS
GFLHPAAPANANSLNSTFSVLPQRFPQFQQHRAVYNSFGFPGQAARYPWMAFPRNSIMHLNHTA
NPTSNSNFLDLNLPPQHNTGLGGIPIADNNSSVESLNMKEWQDGLRALLPNININFGGLPNSSS
PSNANHSAPTSNTATTDSVSWDSPGSWTDPAIITGIPASSGNTLDSIQDDNPPHWLKSLQALTE
VDGPSAASPQPHHSAPFSTQIPLHRASWNPYPPPSNPSSFHSPPPGFQTAFRPPSKTPTDLLQS
STLDRH

hide sequence

RefSeq Acc Id:

XP_006236333 ⟸ XM_006236271

- Peptide Label:

isoform X3

- Sequence:

show sequence

MSRSPDAKEDPVECPLCMEPLEIDDINFFPCTCGYQICRFCWHRIRTDENGLCPACRKPYPEDP
AVYKPLSQEELQRIKNEKKQKQNERKQKISENRKHLASVRVVQKNLVFVVGLSQRLADPEVLKR
PEYFGKFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQCVNNVVVDGRTLKASLGT
TKYCSYFLKNMQCPKPDCMYLHELGDEAASFTKEEMQAGKHQEYEQKLLQELYKLNPNFLQLST
GSVDKNKNKVTPLQSPIDKPSDSLSIGNGDNSQQISNSDTPSPPPGLSKSNPVIPISSSNHSAR
SPFEGAVTESQSLFSDNFRHPNPIPSGLPPFPSSPQTPSDWPTAPEPQSLFTSETIPVSSSTDW
QAAFGFGSSKQPEDDLGFDPFDVTRKALADLIEKELSVQDQPSLSSTSLQNSSSHTTSAKGPGS
GFLHPAAPANANSLNSTFSVLPQRFPQFQQHRAVYNSFGFPGQAARYPWMAFPRNSIMHLNHTA
NPTSNSNFLDLNLPPQHNTGLGGIPIAGIPASSGNTLDSIQDDNPPHWLKSLQALTEVDGPSAA
SPQPHHSAPFSTQIPLHRASWNPYPPPSNPSSFHSPPPGFQTAFRPPSKTPTDLLQSSTLDRH

hide sequence

RefSeq Acc Id:	XP_006236334 ⟸ XM_006236272
- Peptide Label:	isoform X2
- UniProtKB:	A0A8I6AGK1 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSRSPDAKEDPVECPLCMEPLEIDDINFFPCTCGYQICRFCWHRIRTDENGLCPACRKPYPEDP AVYKPLSQEELQRIKNEKKQKQNERKQKISENRKHLASVRVVQKNLVFVVGLSQRLADPEVLKR PEYFGKFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQCVNNVVVDGRTLKASLGT TKYCSYFLKNMQCPKPDCMYLHELGDEAASFTKEEMQAGKHQEYEQKLLQELYKLNPNFLQLST GSVDKNKNKVTPLQRYDVPIDKPSDSLSIGNGDNSQQISNSDTPSPPPGLSKSNPVIPISSSNH SARSPFEGAVTESQSLFSDNFRHPNPIPSGLPPFPSSPQTPSDWPTAPEPQSLFTSETIPVSSS TDWQAAFGFGSSKQPEDDLGFDPFDVTRKALADLIEKELSVQDQPSLSSTSLQNSSSHTTSAKG PGSGFLHPAAPANANSLNSTFSVLPQRFPQFQQHRAVYNSFGFPGQAARYPWMAFPRNSIMHLN HTANPTSNSNFLDLNLPPQHNTGLGGIPIAGIPASSGNTLDSIQDDNPPHWLKSLQALTEVDGP SAASPQPHHSAPFSTQIPLHRASWNPYPPPSNPSSFHSPPPGFQTAFRPPSKTPTDLLQSSTLD RH hide sequence

RefSeq Acc Id:

XP_006236335 ⟸ XM_006236273

- Peptide Label:

isoform X7

- Sequence:

show sequence

MSRSPDAKEDPVECPLCMEPLEIDDINFFPCTCGYQICRFCWHRIRTDENGLCPACRKPYPEDP
AVYKPLSQEELQRIKNEKKQKQNERKQKISENRKHLASVRVVQKNLVFVVGLSQRLADPEVLKR
PEYFGKFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQCVNNVVVDGRTLKASLGT
TKYCSYFLKNMQCPKPDCMYLHELGDEAASFTKEEMQAGKHQEYEQKLLQELYKLNPNFLQLST
GSVDKNKNKVTPLQSPIDKPSDSLSIGNGDNSQQISNSDTPSPPPGLSKSNPVIPISSSNHSAR
SPFEGAVTESQSLFSDNFRHPNPIPSGLPPFPSSPQTPSDWPTAPEPQSLFTSETIPVSSSTDW
QAAFGFGSSKQPEDDLGFDPFDVTRKALADLIEKELSVQDQPSLSSTSLQNSSSHTTSAKGPGS
GFLHPAAPANANSLNSTFSVLPQRFPQFQQHRAVYNSFGFPGQAARYPWMAFPRNSIMHLNHTA
NPTSNSNFLDLNLPPQHNTGLGGIPIAGEEEVKVSTMPLSASSHSLQQGQQPTSLHTTXAXDTR
TERKGED

hide sequence

RefSeq Acc Id:	XP_006236336 ⟸ XM_006236274
- Peptide Label:	isoform X6
- UniProtKB:	A0A8I5ZNZ5 (UniProtKB/TrEMBL), A6IEN7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSRSPDAKEDPVECPLCMEPLEIDDINFFPCTCGYQICRFCWHRIRTDENGLCPACRKPYPEDP AVYKPLSQEELQRIKNEKKQKQNERKQKISENRKHLASVRVVQKNLVFVVGLSQRLADPEVLKR PEYFGKFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQCVNNVVVDGRTLKASLGT TKYCSYFLKNMQCPKPDCMYLHELGDEAASFTKEEMQAGKHQEYEQKLLQELYKLNPNFLQLST GSVDKNKNKVTPLQRYDVPIDKPSDSLSIGNGDNSQQISNSDTPSPPPGLSKSNPVIPISSSNH SARSPFEGAVTESQSLFSDNFRHPNPIPSGLPPFPSSPQTPSDWPTAPEPQSLFTSETIPVSSS TDWQAAFGFGSSKQPEDDLGFDPFDVTRKALADLIEKELSVQDQPSLSSTSLQNSSSHTTSAKG PGSGFLHPAAPANANSLNSTFSVLPQRFPQFQQHRAVYNSFGFPGQAARYPWMAFPRNSIMHLN HTANPTSNSNFLDLNLPPQHNTGLGGIPIAGEEEVKVSTMPLSASSHSLQQGQQPTSLHTTXAX DTRTERKGED hide sequence

Ensembl Acc Id:

ENSRNOP00000046140 ⟸ ENSRNOT00000040969

Ensembl Acc Id:

ENSRNOP00000087439 ⟸ ENSRNOT00000107953

Ensembl Acc Id:

ENSRNOP00000079631 ⟸ ENSRNOT00000097685

RefSeq Acc Id:	XP_063142063 ⟸ XM_063285993
- Peptide Label:	isoform X5

RefSeq Acc Id:	XP_063142062 ⟸ XM_063285992
- Peptide Label:	isoform X4

RefSeq Acc Id:	XP_063142060 ⟸ XM_063285990
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_063142061 ⟸ XM_063285991
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_063142066 ⟸ XM_063285996
- Peptide Label:	isoform X8

RefSeq Acc Id:	XP_063142065 ⟸ XM_063285995
- Peptide Label:	isoform X7

RefSeq Acc Id:	XP_063142064 ⟸ XM_063285994
- Peptide Label:	isoform X6
- UniProtKB:	A0A8I5ZNZ5 (UniProtKB/TrEMBL), A6IEN7 (UniProtKB/TrEMBL)

Protein Domains

C3H1-type RING-type RRM

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q498M7-F1-model_v2	AlphaFold	Q498M7	1-710	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13692959

Promoter ID:

EPDNEW_R3483

Type:

multiple initiation site

Name:

Cnot4_1

Description:

CCR4-NOT transcription complex, subunit 4

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	4	62,663,217 - 62,663,277	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1310318	AgrOrtholog
BioCyc Gene	G2FUF-45256	BioCyc
Ensembl Genes	ENSRNOG00000010795	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000040969	ENTREZGENE
	ENSRNOT00000040969.6	UniProtKB/TrEMBL
	ENSRNOT00000097685	ENTREZGENE
	ENSRNOT00000097685.2	UniProtKB/TrEMBL
	ENSRNOT00000107953	ENTREZGENE
	ENSRNOT00000107953.2	UniProtKB/TrEMBL
Gene3D-CATH	3.30.40.10	UniProtKB/TrEMBL
	3.30.70.330	UniProtKB/TrEMBL
IMAGE_CLONE	IMAGE:7456520	IMAGE-MGC_LOAD
InterPro	CNOT4_RRM	UniProtKB/TrEMBL
	Mot2	UniProtKB/TrEMBL
	NOT4_mRING-HC-C4C4	UniProtKB/TrEMBL
	Nucleotide-bd_a/b_plait_sf	UniProtKB/TrEMBL
	RBD_domain_sf	UniProtKB/TrEMBL
	RRM_dom	UniProtKB/TrEMBL
	RRM_dom_euk	UniProtKB/TrEMBL
	Znf_CCCH	UniProtKB/TrEMBL
	Znf_RING	UniProtKB/TrEMBL
	Znf_RING/FYVE/PHD	UniProtKB/TrEMBL
KEGG Report	rno:312227	UniProtKB/TrEMBL
MGC_CLONE	MGC:114505	IMAGE-MGC_LOAD
NCBI Gene	312227	ENTREZGENE
PANTHER	CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 4	UniProtKB/TrEMBL
	PTHR12603	UniProtKB/TrEMBL
Pfam	RRM_1	UniProtKB/TrEMBL
	zf-RING_4	UniProtKB/TrEMBL
PhenoGen	Cnot4	PhenoGen
PROSITE	RRM	UniProtKB/TrEMBL
	ZF_C3H1	UniProtKB/TrEMBL
	ZF_RING_2	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000010795	RatGTEx
SMART	RRM_1	UniProtKB/TrEMBL
Superfamily-SCOP	RING/U-box	UniProtKB/TrEMBL
	SSF54928	UniProtKB/TrEMBL
UniProt	A0A8I5ZNZ5	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6AGK1	ENTREZGENE, UniProtKB/TrEMBL
	A0ABZ3NNF0_RAT	UniProtKB/TrEMBL
	A6IEN7	ENTREZGENE, UniProtKB/TrEMBL
	F1MAD6	ENTREZGENE
	Q498M7	ENTREZGENE, UniProtKB/TrEMBL
UniProt Secondary	F1MAD6	UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2005-12-06	Cnot4	CCR4-NOT transcription complex, subunit 4	Cnot4_predicted	CCR4-NOT transcription complex, subunit 4 (predicted)	Symbol and Name updated	1559027	APPROVED
2005-01-12	Cnot4_predicted	CCR4-NOT transcription complex, subunit 4 (predicted)			Symbol and Name status set to approved	70820	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Annotations - KEGG (archival)