Qtrt2 (queuine tRNA-ribosyltransferase accessory subunit 2) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Behavioral & Substance Use Disorder Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)
Gene: Qtrt2 (queuine tRNA-ribosyltransferase accessory subunit 2) Rattus norvegicus
Analyze
Symbol: Qtrt2
Name: queuine tRNA-ribosyltransferase accessory subunit 2
RGD ID: 1310054
Description: Predicted to enable protein heterodimerization activity; protein homodimerization activity; and tRNA binding activity. Predicted to be involved in tRNA wobble guanine modification. Predicted to act upstream of or within tRNA modification. Predicted to be located in cytoplasmic side of mitochondrial outer membrane. Predicted to be part of tRNA-guanine transglycosylase complex. Orthologous to human QTRT2 (queuine tRNA-ribosyltransferase accessory subunit 2); INTERACTS WITH (+)-schisandrin B; amitrole; amphetamine.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: LOC288364; Qtrtd1; queuine tRNA-ribosyltransferase domain containing 1; queuine tRNA-ribosyltransferase subunit QTRTD1
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81170,312,352 - 70,343,139 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1170,312,378 - 70,343,128 (+)EnsemblGRCr8
mRatBN7.21156,806,417 - 56,837,239 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1156,806,385 - 56,837,228 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1165,632,383 - 65,650,397 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01158,294,634 - 58,312,646 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01157,343,262 - 57,361,262 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01161,748,822 - 61,779,631 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1161,748,878 - 61,779,631 (+)Ensemblrn6Rnor6.0
Rnor_5.01160,882,637 - 60,913,401 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41158,386,436 - 58,402,983 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1156,372,175 - 56,390,188 (+)NCBICelera
RGSC_v3.11158,442,080 - 58,460,354 (+)NCBI
Cytogenetic Map11q21NCBI
JBrowse:




Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. GOA pipeline RGD automated data pipeline
3. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:19414587   PMID:20354154  


Genomics

Comparative Map Data
Qtrt2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81170,312,352 - 70,343,139 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1170,312,378 - 70,343,128 (+)EnsemblGRCr8
mRatBN7.21156,806,417 - 56,837,239 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1156,806,385 - 56,837,228 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1165,632,383 - 65,650,397 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01158,294,634 - 58,312,646 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01157,343,262 - 57,361,262 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01161,748,822 - 61,779,631 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1161,748,878 - 61,779,631 (+)Ensemblrn6Rnor6.0
Rnor_5.01160,882,637 - 60,913,401 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41158,386,436 - 58,402,983 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1156,372,175 - 56,390,188 (+)NCBICelera
RGSC_v3.11158,442,080 - 58,460,354 (+)NCBI
Cytogenetic Map11q21NCBI
QTRT2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh383114,056,737 - 114,088,422 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl3114,005,833 - 114,088,542 (+)Ensemblhg38GRCh38
GRCh373113,775,584 - 113,807,269 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 363115,258,301 - 115,289,959 (+)NCBIBuild 36Build 36hg18NCBI36
Build 343115,258,300 - 115,289,956NCBI
Celera3112,184,038 - 112,215,695 (+)NCBICelera
Cytogenetic Map3q13.31NCBI
HuRef3111,149,602 - 111,181,262 (+)NCBIHuRef
CHM1_13113,738,942 - 113,770,623 (+)NCBICHM1_1
T2T-CHM13v2.03116,778,012 - 116,809,687 (+)NCBIT2T-CHM13v2.0
Qtrt2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391643,681,879 - 43,710,063 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1643,681,770 - 43,747,172 (-)EnsemblGRCm39 EnsemblGRCm39
GRCm381643,861,407 - 43,889,797 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1643,861,407 - 43,926,809 (-)Ensemblmm10GRCm38
MGSCv371643,861,520 - 43,889,789 (-)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv361643,780,739 - 43,809,008 (-)NCBIMGSCv36mm8
Celera1644,217,238 - 44,245,427 (-)NCBICelera
Cytogenetic Map16B4NCBI
cM Map1628.44NCBI
Qtrt2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542714,138,161 - 14,171,709 (+)Ensembl
ChiLan1.0NW_00495542714,139,024 - 14,169,402 (+)NCBIChiLan1.0ChiLan1.0
QTRT2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22112,048,159 - 112,079,745 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan13112,052,937 - 112,084,527 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v03111,194,231 - 111,225,895 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.13118,114,739 - 118,146,349 (+)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl3118,114,739 - 118,146,349 (+)EnsemblpanPan2panpan1.1
QTRT2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13318,317,322 - 18,341,962 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3318,317,348 - 18,349,988 (+)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha3318,425,344 - 18,569,319 (+)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.03318,563,000 - 18,707,657 (+)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3318,563,070 - 18,595,453 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13318,366,002 - 18,515,450 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03318,418,039 - 18,562,342 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03318,962,963 - 19,107,555 (+)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Qtrt2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405602135,970,138 - 135,995,473 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365361,526,418 - 1,551,928 (+)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049365361,526,408 - 1,551,922 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
QTRT2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl13145,853,371 - 145,879,845 (-)EnsemblsusScr11Sscrofa11.1
Sscrofa11.113145,853,367 - 145,879,863 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.213155,445,574 - 155,472,647 (-)NCBISscrofa10.2Sscrofa10.2susScr3
QTRT2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12266,779,065 - 66,809,427 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2266,778,116 - 66,809,412 (-)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_02366604199,656,986 - 99,687,695 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Qtrt2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462473134,407,484 - 34,449,138 (-)NCBIHetGla 1.0HetGla 1.0hetGla2
Qtrt2
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v1428,761,172 - 28,777,796 (-)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Qtrt2
229 total Variants

QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1300147Bp187Blood pressure QTL 1873.67arterial blood pressure trait (VT:2000000)blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)112252474682951192Rat
1598841Memor7Memory QTL 7exploratory behavior trait (VT:0010471)total horizontal distance resulting from voluntary locomotion in an experimental apparatus (CMO:0001443)113330600878306008Rat
724554Iddm17Insulin dependent diabetes mellitus QTL 170.001blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)114644316891443168Rat
1598811Bp291Blood pressure QTL 2911.9arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)113330600878306008Rat
1581565Pur10Proteinuria QTL 100.0001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)115827236396350770Rat
4889859Pur28Proteinuria QTL 2819.50.001urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)115892833699753367Rat
8694376Bw156Body weight QTL 1562.250.001body lean mass (VT:0010483)lean tissue morphological measurement (CMO:0002184)113674945981749459Rat
10755497Bp388Blood pressure QTL 3882.76arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)113294306789836615Rat
1300130Rf20Renal function QTL 204.44kidney glomerulus integrity trait (VT:0010546)kidney glomerulus diameter (CMO:0001166)113191546976915469Rat
10058952Gmadr6Adrenal mass QTL 62.290.0072adrenal gland mass (VT:0010420)both adrenal glands wet weight to body weight ratio (CMO:0002411)113642841681428416Rat
1558659Tescar1Testicular tumor resistance QTL 13.9testis integrity trait (VT:0010572)percentage of study population developing testis tumors during a period of time (CMO:0001261)113461876079618760Rat
1300135Rf19Renal function QTL 193.38blood creatinine amount (VT:0005328)creatinine clearance (CMO:0000765)115441539196071021Rat
2298551Neuinf10Neuroinflammation QTL 103.7nervous system integrity trait (VT:0010566)spinal cord beta-2 microglobulin mRNA level (CMO:0002125)115893182292356038Rat
2312566Glom20Glomerulus QTL 203.60.001kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)115775483796071021Rat
724563Uae10Urinary albumin excretion QTL 106urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)112019354996351019Rat
9589032Epfw10Epididymal fat weight QTL 109.290.001epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)113674945981749459Rat
724561Plsm4Polydactyly-luxate syndrome (PLS) morphotypes QTL 40.0003forelimb integrity trait (VT:0010562)front foot phalanges count (CMO:0001947)116796218499753367Rat
9590313Scort20Serum corticosterone level QTL 206.510.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)113674945981749459Rat
4889521Gluco62Glucose level QTL 622.820.001blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)116859932196497754Rat
7411658Foco27Food consumption QTL 2716.20.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)116985594399753367Rat
8694424Bw162Body weight QTL 1623.80.001body lean mass (VT:0010483)lean tissue morphological measurement (CMO:0002184)113674945981749459Rat
1581572Uae35Urinary albumin excretion QTL 350.0001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)115827236396350770Rat
1300110Stl7Serum triglyceride level QTL 74.64blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)115107102196071021Rat
631510Spl2Serum phospholipid level QTL 24.1blood phospholipid amount (VT:0006084)serum phospholipid level (CMO:0001171)112755668572556685Rat


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
17 12 67 165 91 90 59 93 59 6 373 193 11 144 96 93 31 19 19

Sequence


Ensembl Acc Id: ENSRNOT00000089340   ⟹   ENSRNOP00000070976
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 Ensembl1161,761,613 - 61,777,942 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000091598   ⟹   ENSRNOP00000072467
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1156,817,760 - 56,837,228 (+)Ensembl
Rnor_6.0 Ensembl1161,761,616 - 61,777,942 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000093552   ⟹   ENSRNOP00000076283
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1170,312,378 - 70,343,128 (+)Ensembl
mRatBN7.2 Ensembl1156,806,385 - 56,837,228 (+)Ensembl
Rnor_6.0 Ensembl1161,748,883 - 61,779,631 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000093719   ⟹   ENSRNOP00000076331
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1170,312,378 - 70,343,128 (+)Ensembl
mRatBN7.2 Ensembl1156,806,385 - 56,837,228 (+)Ensembl
Rnor_6.0 Ensembl1161,748,878 - 61,779,631 (+)Ensembl
RefSeq Acc Id: NM_001305153   ⟹   NP_001292082
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81170,325,121 - 70,343,135 (+)NCBI
mRatBN7.21156,819,219 - 56,837,235 (+)NCBI
Rnor_6.01161,761,613 - 61,779,627 (+)NCBI
Celera1156,372,175 - 56,390,188 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006248320   ⟹   XP_006248382
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81170,312,575 - 70,343,139 (+)NCBI
mRatBN7.21156,806,419 - 56,837,239 (+)NCBI
Rnor_6.01161,748,822 - 61,779,631 (+)NCBI
Rnor_5.01160,882,637 - 60,913,401 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008768759   ⟹   XP_008766981
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81170,312,449 - 70,343,139 (+)NCBI
mRatBN7.21156,806,418 - 56,837,239 (+)NCBI
Rnor_6.01161,748,822 - 61,779,631 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008768760   ⟹   XP_008766982
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81170,312,449 - 70,343,139 (+)NCBI
mRatBN7.21156,806,417 - 56,837,239 (+)NCBI
Rnor_6.01161,748,822 - 61,779,631 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008768761   ⟹   XP_008766983
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81170,312,449 - 70,343,139 (+)NCBI
mRatBN7.21156,806,418 - 56,837,239 (+)NCBI
Rnor_6.01161,748,822 - 61,779,631 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008768762   ⟹   XP_008766984
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81170,325,212 - 70,343,139 (+)NCBI
mRatBN7.21156,819,310 - 56,837,239 (+)NCBI
Rnor_6.01161,761,758 - 61,779,631 (+)NCBI
Sequence:
RefSeq Acc Id: XM_039088231   ⟹   XP_038944159
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81170,312,352 - 70,343,139 (+)NCBI
mRatBN7.21156,806,469 - 56,837,239 (+)NCBI
RefSeq Acc Id: XM_039088233   ⟹   XP_038944161
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81170,312,353 - 70,343,139 (+)NCBI
mRatBN7.21156,806,455 - 56,837,239 (+)NCBI
RefSeq Acc Id: XR_005491014
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81170,312,449 - 70,339,610 (+)NCBI
mRatBN7.21156,806,417 - 56,833,793 (+)NCBI
RefSeq Acc Id: XP_006248382   ⟸   XM_006248320
- Peptide Label: isoform X2
- UniProtKB: A0A1W2Q6P4 (UniProtKB/TrEMBL),   A6IR22 (UniProtKB/TrEMBL),   M0RB91 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008766981   ⟸   XM_008768759
- Peptide Label: isoform X1
- UniProtKB: M0RB91 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008766982   ⟸   XM_008768760
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_008766983   ⟸   XM_008768761
- Peptide Label: isoform X4
- UniProtKB: D3ZBQ4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008766984   ⟸   XM_008768762
- Peptide Label: isoform X5
- Sequence:
RefSeq Acc Id: NP_001292082   ⟸   NM_001305153
- UniProtKB: A0A1W2Q6P4 (UniProtKB/TrEMBL),   A6IR22 (UniProtKB/TrEMBL),   M0RB91 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000070976   ⟸   ENSRNOT00000089340
Ensembl Acc Id: ENSRNOP00000076283   ⟸   ENSRNOT00000093552
Ensembl Acc Id: ENSRNOP00000076331   ⟸   ENSRNOT00000093719
Ensembl Acc Id: ENSRNOP00000072467   ⟸   ENSRNOT00000091598
RefSeq Acc Id: XP_038944161   ⟸   XM_039088233
- Peptide Label: isoform X2
- UniProtKB: A0A1W2Q6P4 (UniProtKB/TrEMBL),   A6IR22 (UniProtKB/TrEMBL),   M0RB91 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038944159   ⟸   XM_039088231
- Peptide Label: isoform X1
- UniProtKB: M0RB91 (UniProtKB/TrEMBL)
Protein Domains
tRNA-guanine(15) transglycosylase-like

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-M0RB91-F1-model_v2 AlphaFold M0RB91 1-415 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13698157
Promoter ID:EPDNEW_R8680
Type:initiation region
Name:Qtrt2_1
Description:queuine tRNA-ribosyltransferase accessory subunit 2
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01161,748,909 - 61,748,969EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1310054 AgrOrtholog
BioCyc Gene G2FUF-21333 BioCyc
BioCyc Pathway PWY-8105 [queuosine biosynthesis II (queuine salvage)] BioCyc
BioCyc Pathway Image PWY-8105 BioCyc
Ensembl Genes ENSRNOG00000060729 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000093552 ENTREZGENE
  ENSRNOT00000093552.3 UniProtKB/TrEMBL
  ENSRNOT00000093719 ENTREZGENE
  ENSRNOT00000093719.3 UniProtKB/TrEMBL
Gene3D-CATH 3.20.20.105 UniProtKB/TrEMBL
InterPro QTRTD1 UniProtKB/TrEMBL
  Queuine_tRNA-ribosyltrfase UniProtKB/TrEMBL
  TGT-like_sf UniProtKB/TrEMBL
  tRNA_ribo_trans UniProtKB/TrEMBL
KEGG Report rno:288364 UniProtKB/TrEMBL
NCBI Gene 288364 ENTREZGENE
PANTHER QUEUINE TRNA-RIBOSYLTRANSFERASE ACCESSORY SUBUNIT 2 UniProtKB/TrEMBL
  QUEUINE TRNA-RIBOSYLTRANSFERASE ACCESSORY SUBUNIT 2 UniProtKB/TrEMBL
Pfam TGT UniProtKB/TrEMBL
PhenoGen Qtrt2 PhenoGen
RatGTEx ENSRNOG00000060729 RatGTEx
Superfamily-SCOP tRNA_ribo_trans UniProtKB/TrEMBL
UniProt A0A1W2Q6P4 ENTREZGENE, UniProtKB/TrEMBL
  A6IR22 ENTREZGENE, UniProtKB/TrEMBL
  D3ZBQ4 ENTREZGENE, UniProtKB/TrEMBL
  M0RB91 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-03-01 Qtrt2  queuine tRNA-ribosyltransferase accessory subunit 2  Qtrtd1  queuine tRNA-ribosyltransferase domain containing 1  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-04-30 Qtrtd1  queuine tRNA-ribosyltransferase domain containing 1   Qtrtd1_predicted  queuine tRNA-ribosyltransferase domain containing 1 (predicted)  'predicted' is removed 2292626 APPROVED
2005-01-12 Qtrtd1_predicted  queuine tRNA-ribosyltransferase domain containing 1 (predicted)      Symbol and Name status set to approved 70820 APPROVED