Tmem161b (transmembrane protein 161B) - Rat Genome Database

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Advanced Search (OLGA)
Gene: Tmem161b (transmembrane protein 161B) Rattus norvegicus
Analyze
Symbol: Tmem161b
Name: transmembrane protein 161B
RGD ID: 1309660
Description: Predicted to be involved in regulation of cardiac muscle cell action potential and regulation of heart rate. Predicted to be located in membrane. Orthologous to human TMEM161B (transmembrane protein 161B); INTERACTS WITH bisphenol A; chloroprene; oxaliplatin.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: LOC103691414; LOC309953; RGD1309660; similar to hypothetical protein MGC33214; uncharacterized LOC103691414
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8216,447,094 - 16,529,359 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl216,449,934 - 16,528,481 (+)EnsemblGRCr8
mRatBN7.2214,714,451 - 14,793,809 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl214,715,701 - 14,793,803 (+)EnsemblmRatBN7.2
Rnor_6.0212,252,522 - 12,550,368 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl212,516,702 - 12,549,389 (+)Ensemblrn6Rnor6.0
Rnor_5.0212,376,547 - 12,411,760 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4213,466,541 - 13,590,181 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera211,020,254 - 11,098,447 (+)NCBICelera
RGSC_v3.1213,386,915 - 13,466,184 (-)NCBI
Cytogenetic Map2q11NCBI
JBrowse:




Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
membrane  (IEA)

References

References - curated
# Reference Title Reference Citation
1. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions

Genomics

Comparative Map Data
Tmem161b
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8216,447,094 - 16,529,359 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl216,449,934 - 16,528,481 (+)EnsemblGRCr8
mRatBN7.2214,714,451 - 14,793,809 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl214,715,701 - 14,793,803 (+)EnsemblmRatBN7.2
Rnor_6.0212,252,522 - 12,550,368 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl212,516,702 - 12,549,389 (+)Ensemblrn6Rnor6.0
Rnor_5.0212,376,547 - 12,411,760 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4213,466,541 - 13,590,181 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera211,020,254 - 11,098,447 (+)NCBICelera
RGSC_v3.1213,386,915 - 13,466,184 (-)NCBI
Cytogenetic Map2q11NCBI
TMEM161B
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38588,185,570 - 88,268,845 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl588,185,575 - 88,269,476 (-)Ensemblhg38GRCh38
GRCh37587,484,133 - 87,564,662 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36587,526,779 - 87,600,421 (-)NCBIBuild 36Build 36hg18NCBI36
Celera583,382,871 - 83,456,477 (-)NCBICelera
Cytogenetic Map5q14.3NCBI
HuRef582,694,851 - 82,768,485 (-)NCBIHuRef
CHM1_1586,923,718 - 86,997,371 (-)NCBICHM1_1
T2T-CHM13v2.0588,666,901 - 88,750,114 (-)NCBIT2T-CHM13v2.0
Tmem161b
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391384,370,415 - 84,444,085 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1384,370,415 - 84,444,260 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm381384,222,296 - 84,295,966 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1384,222,296 - 84,296,141 (+)Ensemblmm10GRCm38
MGSCv371384,361,901 - 84,435,571 (+)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv361384,695,436 - 84,769,074 (+)NCBIMGSCv36mm8
Celera1386,471,301 - 86,544,956 (+)NCBICelera
Cytogenetic Map13C3NCBI
cM Map1344.2NCBI
Tmem161b
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541823,117,162 - 23,185,517 (+)Ensembl
ChiLan1.0NW_00495541823,117,162 - 23,185,397 (+)NCBIChiLan1.0ChiLan1.0
TMEM161B
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2427,123,296 - 27,215,785 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1525,276,970 - 25,370,910 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0527,098,380 - 27,181,742 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1527,233,758 - 27,317,435 (+)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl527,233,758 - 27,310,581 (+)EnsemblpanPan2panpan1.1
TMEM161B
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1320,336,176 - 20,405,732 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl320,336,340 - 20,519,939 (+)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha321,702,249 - 21,773,395 (+)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.0320,245,118 - 20,316,242 (+)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl320,245,377 - 20,325,015 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1320,223,146 - 20,294,261 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0320,186,649 - 20,257,691 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0320,472,602 - 20,543,715 (+)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Tmem161b
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024407213175,981,426 - 176,044,738 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364696,580,299 - 6,644,282 (-)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049364696,580,057 - 6,644,332 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
TMEM161B
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl295,625,608 - 95,700,511 (-)EnsemblsusScr11Sscrofa11.1
Sscrofa11.1295,625,444 - 95,700,575 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2298,274,440 - 98,350,455 (-)NCBISscrofa10.2Sscrofa10.2susScr3
TMEM161B
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1482,178,355 - 82,251,984 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366604931,217,223 - 31,291,180 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Tmem161b
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247437,545,579 - 7,612,877 (-)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_0046247437,545,374 - 7,612,893 (-)NCBIHetGla 1.0HetGla 1.0hetGla2
Tmem161b
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v13213,663,967 - 213,745,251 (+)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Tmem161b
518 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:24
Count of miRNA genes:18
Interacting mature miRNAs:24
Transcripts:ENSRNOT00000050072
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1578664Bmd9Bone mineral QTL density 95femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)2573632550736325Rat
1331764Bp205Blood pressure QTL 2053.476arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)21436870759368707Rat
738010Lnnr3Liver neoplastic nodule remodeling QTL 32.94liver integrity trait (VT:0010547)liver remodeling tumorous lesion number (CMO:0001461)2142977529Rat
9590080Insglur4Insulin/glucose ratio QTL 428.70.001blood insulin amount (VT:0001560)calculated plasma insulin level (CMO:0002170)2615276751152767Rat
10755430Coatc6Coat color QTL 60.02576coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)21332504158325041Rat
1600379Mcs18Mammary carcinoma susceptibility QTL 182.6mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)2962358144538110Rat
1331760Bp206Blood pressure QTL 2063.62454arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)24265106205135428Rat
1579916Bp270Blood pressure QTL 2700.003arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)21605188361051883Rat
731166Mamtr2Mammary tumor resistance QTL 20.0001mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)2962358154623581Rat
61368Mcs1Mammary carcinoma susceptibility QTL 14.4mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)2962358125054526Rat
61355Bp36Blood pressure QTL 362.9blood pressure trait (VT:0000183)systolic blood pressure (CMO:0000004)27605533104774005Rat


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
23 13 81 202 91 90 59 102 59 6 428 225 21 181 113 122 31 26 26

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001433109 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001433110 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001433111 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001433112 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001433113 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001433114 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001433115 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_001057417 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039103416 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063282659 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063282660 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063282661 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063282662 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063282663 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063282664 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063282665 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063282666 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063282667 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063282668 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063282669 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063282670 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063282671 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063282672 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063282673 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005500479 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide CH473955 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAXUCZ010000002 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSRNOT00000050072   ⟹   ENSRNOP00000049795
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl216,495,693 - 16,528,481 (+)Ensembl
mRatBN7.2 Ensembl214,760,143 - 14,793,803 (+)Ensembl
Rnor_6.0 Ensembl212,516,702 - 12,549,389 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000102942   ⟹   ENSRNOP00000080669
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl216,449,934 - 16,528,480 (+)Ensembl
mRatBN7.2 Ensembl214,743,572 - 14,793,803 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000108171   ⟹   ENSRNOP00000078226
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl216,451,137 - 16,528,480 (+)Ensembl
mRatBN7.2 Ensembl214,715,701 - 14,793,803 (+)Ensembl
RefSeq Acc Id: XM_039103416   ⟹   XP_038959344
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8216,451,114 - 16,526,109 (+)NCBI
mRatBN7.2214,715,664 - 14,790,493 (+)NCBI
RefSeq Acc Id: XM_063282659   ⟹   XP_063138729
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8216,447,094 - 16,529,359 (+)NCBI
RefSeq Acc Id: XM_063282660   ⟹   XP_063138730
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8216,453,680 - 16,529,359 (+)NCBI
RefSeq Acc Id: XM_063282661   ⟹   XP_063138731
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8216,450,408 - 16,529,359 (+)NCBI
RefSeq Acc Id: XM_063282662   ⟹   XP_063138732
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8216,451,127 - 16,529,359 (+)NCBI
RefSeq Acc Id: XM_063282663   ⟹   XP_063138733
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8216,451,214 - 16,529,359 (+)NCBI
RefSeq Acc Id: XM_063282664   ⟹   XP_063138734
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8216,489,663 - 16,529,359 (+)NCBI
RefSeq Acc Id: XM_063282665   ⟹   XP_063138735
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8216,451,214 - 16,529,359 (+)NCBI
RefSeq Acc Id: XM_063282666   ⟹   XP_063138736
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8216,489,663 - 16,529,359 (+)NCBI
RefSeq Acc Id: XM_063282667   ⟹   XP_063138737
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8216,451,112 - 16,526,045 (+)NCBI
RefSeq Acc Id: XM_063282668   ⟹   XP_063138738
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8216,450,171 - 16,529,359 (+)NCBI
RefSeq Acc Id: XM_063282669   ⟹   XP_063138739
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8216,508,153 - 16,529,359 (+)NCBI
RefSeq Acc Id: XM_063282670   ⟹   XP_063138740
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8216,508,156 - 16,529,359 (+)NCBI
RefSeq Acc Id: XM_063282671   ⟹   XP_063138741
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8216,508,153 - 16,529,359 (+)NCBI
RefSeq Acc Id: XM_063282672   ⟹   XP_063138742
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8216,451,213 - 16,529,359 (+)NCBI
RefSeq Acc Id: XM_063282673   ⟹   XP_063138743
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8216,451,116 - 16,520,264 (+)NCBI
RefSeq Acc Id: XR_005500479
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8216,451,118 - 16,520,264 (+)NCBI
mRatBN7.2214,715,664 - 14,790,411 (+)NCBI
Protein Sequences
Protein RefSeqs NP_001420038 (Get FASTA)   NCBI Sequence Viewer  
  NP_001420039 (Get FASTA)   NCBI Sequence Viewer  
  NP_001420040 (Get FASTA)   NCBI Sequence Viewer  
  NP_001420041 (Get FASTA)   NCBI Sequence Viewer  
  NP_001420042 (Get FASTA)   NCBI Sequence Viewer  
  NP_001420043 (Get FASTA)   NCBI Sequence Viewer  
  NP_001420044 (Get FASTA)   NCBI Sequence Viewer  
  XP_038959344 (Get FASTA)   NCBI Sequence Viewer  
  XP_063138729 (Get FASTA)   NCBI Sequence Viewer  
  XP_063138730 (Get FASTA)   NCBI Sequence Viewer  
  XP_063138731 (Get FASTA)   NCBI Sequence Viewer  
  XP_063138732 (Get FASTA)   NCBI Sequence Viewer  
  XP_063138733 (Get FASTA)   NCBI Sequence Viewer  
  XP_063138734 (Get FASTA)   NCBI Sequence Viewer  
  XP_063138735 (Get FASTA)   NCBI Sequence Viewer  
  XP_063138736 (Get FASTA)   NCBI Sequence Viewer  
  XP_063138737 (Get FASTA)   NCBI Sequence Viewer  
  XP_063138738 (Get FASTA)   NCBI Sequence Viewer  
  XP_063138739 (Get FASTA)   NCBI Sequence Viewer  
  XP_063138740 (Get FASTA)   NCBI Sequence Viewer  
  XP_063138741 (Get FASTA)   NCBI Sequence Viewer  
  XP_063138742 (Get FASTA)   NCBI Sequence Viewer  
  XP_063138743 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein EDM09972 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000049795
  ENSRNOP00000049795.6
  ENSRNOP00000078226
  ENSRNOP00000078226.1
  ENSRNOP00000080669
  ENSRNOP00000080669.1
Ensembl Acc Id: ENSRNOP00000049795   ⟸   ENSRNOT00000050072
RefSeq Acc Id: XP_038959344   ⟸   XM_039103416
- Peptide Label: isoform X7
Ensembl Acc Id: ENSRNOP00000078226   ⟸   ENSRNOT00000108171
Ensembl Acc Id: ENSRNOP00000080669   ⟸   ENSRNOT00000102942
RefSeq Acc Id: XP_063138729   ⟸   XM_063282659
- Peptide Label: isoform X1
- UniProtKB: A0A8I5Y238 (UniProtKB/TrEMBL),   F1LX74 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063138738   ⟸   XM_063282668
- Peptide Label: isoform X3
- UniProtKB: A0A8I5ZR74 (UniProtKB/TrEMBL),   F1LX74 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063138731   ⟸   XM_063282661
- Peptide Label: isoform X3
- UniProtKB: A0A8I5ZR74 (UniProtKB/TrEMBL),   F1LX74 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063138737   ⟸   XM_063282667
- Peptide Label: isoform X6
RefSeq Acc Id: XP_063138743   ⟸   XM_063282673
- Peptide Label: isoform X9
RefSeq Acc Id: XP_063138732   ⟸   XM_063282662
- Peptide Label: isoform X4
RefSeq Acc Id: XP_063138742   ⟸   XM_063282672
- Peptide Label: isoform X8
RefSeq Acc Id: XP_063138735   ⟸   XM_063282665
- Peptide Label: isoform X5
RefSeq Acc Id: XP_063138733   ⟸   XM_063282663
- Peptide Label: isoform X5
RefSeq Acc Id: XP_063138730   ⟸   XM_063282660
- Peptide Label: isoform X2
- UniProtKB: A0A8I5Y238 (UniProtKB/TrEMBL),   F1LX74 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063138736   ⟸   XM_063282666
- Peptide Label: isoform X5
RefSeq Acc Id: XP_063138734   ⟸   XM_063282664
- Peptide Label: isoform X5
RefSeq Acc Id: XP_063138739   ⟸   XM_063282669
- Peptide Label: isoform X8
RefSeq Acc Id: XP_063138741   ⟸   XM_063282671
- Peptide Label: isoform X8
RefSeq Acc Id: XP_063138740   ⟸   XM_063282670
- Peptide Label: isoform X8

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-F1LX74-F1-model_v2 AlphaFold F1LX74 1-486 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1309660 AgrOrtholog
BioCyc Gene G2FUF-54953 BioCyc
Ensembl Genes ENSRNOG00000032414 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000050072 ENTREZGENE
  ENSRNOT00000050072.7 UniProtKB/TrEMBL
  ENSRNOT00000102942 ENTREZGENE
  ENSRNOT00000102942.2 UniProtKB/TrEMBL
  ENSRNOT00000108171 ENTREZGENE
  ENSRNOT00000108171.2 UniProtKB/TrEMBL
InterPro Transmembrane_161A/B UniProtKB/TrEMBL
NCBI Gene 309953 ENTREZGENE
PANTHER PTHR13624 UniProtKB/TrEMBL
  TRANSMEMBRANE PROTEIN 161B UniProtKB/TrEMBL
Pfam Tmemb_161AB UniProtKB/TrEMBL
PhenoGen Tmem161b PhenoGen
RatGTEx ENSRNOG00000032414 RatGTEx
UniProt A0A8I5Y238 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I5ZR74 ENTREZGENE, UniProtKB/TrEMBL
  F1LX74 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2021-03-09 Tmem161b  transmembrane protein 161B  LOC103691414  uncharacterized LOC103691414  Data merged from RGD:9322184 737654 PROVISIONAL
2014-08-25 LOC103691414  uncharacterized LOC103691414      Symbol and Name status set to provisional 70820 PROVISIONAL
2008-02-26 Tmem161b  transmembrane protein 161B  RGD1309660_predicted  similar to hypothetical protein MGC33214 (predicted)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2005-01-20 RGD1309660_predicted  similar to hypothetical protein MGC33214 (predicted)  LOC309953_predicted    Symbol and Name status set to approved 1331353 APPROVED
2005-01-12 LOC309953_predicted  similar to hypothetical protein MGC33214 (predicted)      Symbol and Name status set to provisional 70820 PROVISIONAL