Arrdc2 (arrestin domain containing 2) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Behavioral & Substance Use Disorder Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)
Gene: Arrdc2 (arrestin domain containing 2) Rattus norvegicus
Analyze
Symbol: Arrdc2
Name: arrestin domain containing 2
RGD ID: 1309659
Description: Predicted to enable molecular adaptor activity. Predicted to act upstream of or within myotube differentiation; response to mechanical stimulus; and skeletal muscle tissue development. Predicted to be located in cytoplasmic vesicle. Predicted to be active in cytoplasm and plasma membrane. Orthologous to human ARRDC2 (arrestin domain containing 2); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 3-chloropropane-1,2-diol; 6-propyl-2-thiouracil.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: arrestin domain-containing protein 2; ILAD1; induced by lysergic acid diethylamide-1; LOC306344
RGD Orthologs
Human
Mouse
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81618,635,883 - 18,640,019 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1618,635,883 - 18,640,158 (+)EnsemblGRCr8
mRatBN7.21618,601,897 - 18,606,029 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1618,601,897 - 18,606,029 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1618,644,079 - 18,648,207 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01619,776,755 - 19,780,883 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01618,697,019 - 18,701,147 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Dahl_SR_JrHsd1618,773,582 - 18,777,710 (+)NCBIDahl_SR_JrHsd
Lyon_Normotensive1618,646,528 - 18,650,656 (+)NCBILyon_Normotensive
Lyon_Hypertensive1618,640,479 - 18,644,607 (+)NCBILyon_Hypertensive
F344_StmMcwi1618,781,904 - 18,786,027 (+)NCBIF344_StmMcwi
Rnor_6.01620,352,480 - 20,356,612 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1620,352,480 - 20,356,612 (+)Ensemblrn6Rnor6.0
Rnor_5.01620,209,578 - 20,213,710 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41619,108,344 - 19,112,480 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1618,793,987 - 18,798,119 (+)NCBICelera
RGSC_v3.11619,108,559 - 19,113,938 (+)NCBI
Cytogenetic Map16p14NCBI
JBrowse:




Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(1->4)-beta-D-glucan  (ISO)
1,2-dichloroethane  (ISO)
1,2-dimethylhydrazine  (ISO)
17beta-estradiol  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
3-chloropropane-1,2-diol  (EXP)
3-isobutyl-1-methyl-7H-xanthine  (ISO)
4,4'-sulfonyldiphenol  (ISO)
4-hydroxyphenyl retinamide  (ISO)
5-aza-2'-deoxycytidine  (ISO)
6-propyl-2-thiouracil  (EXP)
acrylamide  (ISO)
aflatoxin B1  (ISO)
all-trans-retinoic acid  (ISO)
aristolochic acid A  (ISO)
arsenous acid  (ISO)
azathioprine  (ISO)
benzene  (ISO)
benzo[a]pyrene  (ISO)
beta-naphthoflavone  (EXP)
bisphenol A  (EXP,ISO)
bisphenol F  (ISO)
C60 fullerene  (EXP)
cadmium atom  (ISO)
cadmium dichloride  (ISO)
carbon nanotube  (ISO)
carmustine  (ISO)
chloroprene  (ISO)
choline  (ISO)
cisplatin  (ISO)
copper(II) chloride  (ISO)
copper(II) sulfate  (ISO)
Cuprizon  (EXP)
cyclosporin A  (ISO)
dexamethasone  (ISO)
diarsenic trioxide  (ISO)
diazinon  (ISO)
diethyl maleate  (EXP)
dorsomorphin  (ISO)
doxorubicin  (ISO)
endosulfan  (EXP)
epoxiconazole  (ISO)
ethanol  (ISO)
folic acid  (ISO)
gentamycin  (EXP)
glyphosate  (ISO)
hydrogen sulfide  (ISO)
indometacin  (ISO)
isoprenaline  (ISO)
L-methionine  (ISO)
lead(0)  (ISO)
menadione  (ISO)
mercury dibromide  (ISO)
methamphetamine  (ISO)
methyl methanesulfonate  (ISO)
N-nitrosodiethylamine  (EXP)
niclosamide  (ISO)
orphenadrine  (EXP)
ozone  (ISO)
paracetamol  (EXP,ISO)
perfluorooctane-1-sulfonic acid  (ISO)
phenobarbital  (ISO)
phenylmercury acetate  (ISO)
pirinixic acid  (ISO)
propiconazole  (ISO)
quercetin  (ISO)
SB 431542  (ISO)
sunitinib  (ISO)
tamoxifen  (ISO)
temozolomide  (ISO)
tetrachloromethane  (EXP,ISO)
tetraphene  (ISO)
thioacetamide  (EXP)
titanium dioxide  (ISO)
triphenyl phosphate  (ISO)
triptonide  (ISO)
troglitazone  (ISO)
urethane  (ISO)
valproic acid  (ISO)
zinc atom  (ISO)
zinc(0)  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
cytoplasm  (IBA)
cytoplasmic vesicle  (IEA,ISO)
plasma membrane  (IBA,IEA,ISO)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:15255935   PMID:23236378  


Genomics

Comparative Map Data
Arrdc2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81618,635,883 - 18,640,019 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1618,635,883 - 18,640,158 (+)EnsemblGRCr8
mRatBN7.21618,601,897 - 18,606,029 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1618,601,897 - 18,606,029 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1618,644,079 - 18,648,207 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01619,776,755 - 19,780,883 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01618,697,019 - 18,701,147 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Dahl_SR_JrHsd1618,773,582 - 18,777,710 (+)NCBIDahl_SR_JrHsd
Lyon_Normotensive1618,646,528 - 18,650,656 (+)NCBILyon_Normotensive
Lyon_Hypertensive1618,640,479 - 18,644,607 (+)NCBILyon_Hypertensive
F344_StmMcwi1618,781,904 - 18,786,027 (+)NCBIF344_StmMcwi
Rnor_6.01620,352,480 - 20,356,612 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1620,352,480 - 20,356,612 (+)Ensemblrn6Rnor6.0
Rnor_5.01620,209,578 - 20,213,710 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41619,108,344 - 19,112,480 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1618,793,987 - 18,798,119 (+)NCBICelera
RGSC_v3.11619,108,559 - 19,113,938 (+)NCBI
Cytogenetic Map16p14NCBI
ARRDC2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381918,001,124 - 18,014,102 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1918,001,126 - 18,014,102 (+)Ensemblhg38GRCh38
GRCh371918,111,933 - 18,124,911 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361917,972,944 - 17,985,911 (+)NCBIBuild 36Build 36hg18NCBI36
Build 341917,979,976 - 17,985,909NCBI
Celera1918,013,652 - 18,026,620 (+)NCBICelera
Cytogenetic Map19p13.11NCBI
HuRef1917,677,133 - 17,689,735 (+)NCBIHuRef
CHM1_11918,111,582 - 18,124,534 (+)NCBICHM1_1
T2T-CHM13v2.01918,135,202 - 18,148,181 (+)NCBIT2T-CHM13v2.0
Arrdc2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39871,287,773 - 71,293,173 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl871,287,773 - 71,292,364 (-)EnsemblGRCm39 EnsemblGRCm39
GRCm38870,835,129 - 70,839,720 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl870,835,129 - 70,839,720 (-)Ensemblmm10GRCm38
MGSCv37873,359,037 - 73,363,619 (-)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv36873,764,127 - 73,768,709 (-)NCBIMGSCv36mm8
Celera873,396,434 - 73,401,016 (-)NCBICelera
Cytogenetic Map8B3.3NCBI
cM Map834.26NCBI
ARRDC2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22022,859,991 - 22,873,192 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11921,870,572 - 21,881,551 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01917,480,879 - 17,491,851 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11918,461,626 - 18,469,085 (+)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1918,461,626 - 18,469,079 (+)EnsemblpanPan2panpan1.1
ARRDC2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12044,931,066 - 44,937,711 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2044,904,789 - 44,938,257 (-)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha2044,844,135 - 44,850,691 (-)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.02045,416,414 - 45,422,969 (-)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2045,416,473 - 45,422,969 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12044,653,466 - 44,660,011 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02045,063,809 - 45,070,363 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02045,339,755 - 45,346,310 (-)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Arrdc2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118203,550,151 - 203,554,372 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365963,099,287 - 3,103,643 (-)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049365963,099,290 - 3,104,206 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ARRDC2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl259,771,113 - 59,778,354 (-)EnsemblsusScr11Sscrofa11.1
Sscrofa11.1259,771,104 - 59,778,500 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2259,339,832 - 59,347,208 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ARRDC2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1616,472,643 - 16,484,642 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl616,472,907 - 16,484,637 (+)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_0236660742,894,743 - 2,906,949 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Arrdc2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046249081,454,664 - 1,457,394 (+)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_0046249081,452,615 - 1,458,347 (+)NCBIHetGla 1.0HetGla 1.0hetGla2
Arrdc2
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v11313,078,317 - 13,082,174 (-)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Arrdc2
24 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:207
Count of miRNA genes:144
Interacting mature miRNAs:170
Transcripts:ENSRNOT00000025956
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1549842Bp248Blood pressure QTL 2480.01arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1638712345387123Rat
2307172Activ4Activity QTL 43.710.00023locomotor behavior trait (VT:0001392)number of entries into a discrete space in an experimental apparatus (CMO:0000960)16133425095Rat
1354584Despr6Despair related QTL 63.10.0067locomotor behavior trait (VT:0001392)amount of time spent in voluntary immobility (CMO:0001043)16139568015Rat
737819Hcas4Hepatocarcinoma susceptibility QTL 44.43liver integrity trait (VT:0010547)volume of individual liver tumorous lesion (CMO:0001078)16423421253708481Rat
631517Scl9Serum cholesterol level QTL 93.3blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)161574800625801629Rat
1354625Despr7Despair related QTL 73.160.016locomotor behavior trait (VT:0001392)amount of time spent in voluntary immobility (CMO:0001043)16474422249744222Rat
61405Niddm6Non-insulin dependent diabetes mellitus QTL 63.660.001blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)16126734272Rat
631830Alc7Alcohol consumption QTL 72.9consumption behavior trait (VT:0002069)ethanol drink intake rate (CMO:0001407)16126734272Rat
7411664Foco30Food consumption QTL 30110.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)16435482249354822Rat
1600378Arunc4Aerobic running capacity QTL 40.03exercise endurance trait (VT:0002332)longest distance run on treadmill (CMO:0001406)1638712345387123Rat
70183BpQTLcluster13Blood pressure QTL cluster 133.654arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)16423421249757901Rat
737826Alc11Alcohol consumption QTL 113.2consumption behavior trait (VT:0002069)ethanol drink intake rate (CMO:0001407)16423421266955197Rat
1600369Hcas8Hepatocarcinoma susceptibility QTL 8liver integrity trait (VT:0010547)liver tumorous lesion number (CMO:0001068)161627818427244292Rat
2303566Bw90Body weight QTL 902body mass (VT:0001259)body weight (CMO:0000012)16139568015Rat
2312663Slep9Serum leptin concentration QTL 90.001blood leptin amount (VT:0005667)serum leptin level (CMO:0000780)1683908666195506Rat
2306902Bp339Blood pressure QTL 3390.01arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)16338679049757901Rat
1300133Rf24Renal function QTL 243.64blood creatinine amount (VT:0005328)creatinine clearance (CMO:0000765)16338679026128267Rat
2312660Bw95Body weight QTL 950.05inguinal fat pad mass (VT:0010424)inguinal fat pad weight to body weight ratio (CMO:0001253)1683908666195506Rat
2312666Insul16Insulin level QTL 160.01blood insulin amount (VT:0001560)serum insulin level (CMO:0000358)1683908666195506Rat
634355Rends4Renal damage susceptibility QTL 40.05kidney blood vessel morphology trait (VT:0000530)organ lesion measurement (CMO:0000677)16126734272Rat
70205Gcr3Gastric cancer resistance QTL 32.3stomach morphology trait (VT:0000470)stomach tumor diameter (CMO:0001889)161773081872536785Rat
2293343Glom16Glomerulus QTL 167.4kidney glomerulus integrity trait (VT:0010546)kidney sclerotic glomeruli count to total glomeruli count ratio (CMO:0001269)1683908652786090Rat
2301406Kidm39Kidney mass QTL 390.002kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)161590580260905802Rat
2312669Stl23Serum triglyceride level QTL 230.01blood triglyceride amount (VT:0002644)serum triglyceride level (CMO:0000360)1683908666195506Rat
6903319Bw114Body weight QTL 1142.70.0037body mass (VT:0001259)body weight (CMO:0000012)16330168348301683Rat

Markers in Region
RH139405  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21618,605,864 - 18,605,992 (+)MAPPERmRatBN7.2
Rnor_6.01620,356,448 - 20,356,575NCBIRnor6.0
Rnor_5.01620,213,546 - 20,213,673UniSTSRnor5.0
RGSC_v3.41619,112,316 - 19,112,443UniSTSRGSC3.4
Celera1618,797,955 - 18,798,082UniSTS
RH 3.4 Map16192.2UniSTS
Cytogenetic Map16p14UniSTS


Expression

RNA-SEQ Expression

adipose tissue
alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
10 16 12 150 247 91 90 65 139 59 22 485 331 11 226 81 92 31 17 17

Sequence


Ensembl Acc Id: ENSRNOT00000025956   ⟹   ENSRNOP00000025956
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1618,635,883 - 18,640,015 (+)Ensembl
mRatBN7.2 Ensembl1618,601,897 - 18,606,029 (+)Ensembl
Rnor_6.0 Ensembl1620,352,480 - 20,356,612 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000170415   ⟹   ENSRNOP00000111023
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1618,635,883 - 18,640,158 (+)Ensembl
RefSeq Acc Id: NM_001107303   ⟹   NP_001100773
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81618,635,883 - 18,640,015 (+)NCBI
mRatBN7.21618,601,897 - 18,606,029 (+)NCBI
Dahl_SR_JrHsd1618,773,582 - 18,777,710 (+)NCBI
Lyon_Normotensive1618,646,528 - 18,650,656 (+)NCBI
Lyon_Hypertensive1618,640,479 - 18,644,607 (+)NCBI
F344_StmMcwi1618,781,904 - 18,786,027 (+)NCBI
Rnor_6.01620,352,480 - 20,356,612 (+)NCBI
Rnor_5.01620,209,578 - 20,213,710 (+)NCBI
RGSC_v3.41619,108,344 - 19,112,480 (+)RGD
Celera1618,793,987 - 18,798,119 (+)RGD
Sequence:
RefSeq Acc Id: XM_063275374   ⟹   XP_063131444
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81618,636,062 - 18,640,019 (+)NCBI
Protein Sequences
Protein RefSeqs NP_001100773 (Get FASTA)   NCBI Sequence Viewer  
  XP_063131444 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein EDL90741 (Get FASTA)   NCBI Sequence Viewer  
  EDL90742 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000025956
  ENSRNOP00000025956.6
  ENSRNOP00000111023.1
RefSeq Acc Id: NP_001100773   ⟸   NM_001107303
- UniProtKB: D3ZPW1 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000025956   ⟸   ENSRNOT00000025956
RefSeq Acc Id: XP_063131444   ⟸   XM_063275374
- Peptide Label: isoform X1
Ensembl Acc Id: ENSRNOP00000111023   ⟸   ENSRNOT00000170415
Protein Domains
Arrestin C-terminal-like   Arrestin-like N-terminal

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-D3ZPW1-F1-model_v2 AlphaFold D3ZPW1 1-191 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1309659 AgrOrtholog
BioCyc Gene G2FUF-11811 BioCyc
Ensembl Genes ENSRNOG00000019009 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000025956 ENTREZGENE
  ENSRNOT00000025956.8 UniProtKB/TrEMBL
  ENSRNOT00000170415.1 UniProtKB/TrEMBL
Gene3D-CATH 2.60.40.640 UniProtKB/TrEMBL
InterPro Arrestin-like_N UniProtKB/TrEMBL
  Arrestin_C UniProtKB/TrEMBL
  Arrestin_C-like UniProtKB/TrEMBL
  Arrestin_domain-protein UniProtKB/TrEMBL
  Ig_E-set UniProtKB/TrEMBL
KEGG Report rno:306344 UniProtKB/TrEMBL
NCBI Gene 306344 ENTREZGENE
PANTHER ARRESTIN DOMAIN CONTAINING PROTEIN UniProtKB/TrEMBL
  ARRESTIN DOMAIN-CONTAINING PROTEIN 2 UniProtKB/TrEMBL
Pfam Arrestin_C UniProtKB/TrEMBL
  Arrestin_N UniProtKB/TrEMBL
PhenoGen Arrdc2 PhenoGen
RatGTEx ENSRNOG00000019009 RatGTEx
SMART Arrestin_C UniProtKB/TrEMBL
Superfamily-SCOP Ig_E-set UniProtKB/TrEMBL
UniProt A0ABK0LX99_RAT UniProtKB/TrEMBL
  A6K9Z5_RAT UniProtKB/TrEMBL
  A6K9Z6_RAT UniProtKB/TrEMBL
  D3ZPW1 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2005-12-06 Arrdc2  arrestin domain containing 2  Arrdc2_predicted  arrestin domain containing 2 (predicted)  Symbol and Name updated 1559027 APPROVED
2005-01-12 Arrdc2_predicted  arrestin domain containing 2 (predicted)      Symbol and Name status set to approved 70820 APPROVED