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Gene: Pcbp2 (poly(rC) binding protein 2) Rattus norvegicus

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Symbol:

Pcbp2

Name:

poly(rC) binding protein 2

RGD ID:

1309626

Description:

Predicted to enable DNA binding activity; RNA binding activity; and ubiquitin protein ligase binding activity. Predicted to be involved in several processes, including IRES-dependent viral translational initiation; chromatin looping; and regulation of defense response. Predicted to act upstream of or within cGAS/STING signaling pathway and positive regulation of transcription by RNA polymerase II. Is active in postsynaptic density. Orthologous to human PCBP2 (poly(rC) binding protein 2); PARTICIPATES IN iron homeostasis pathway; iron storage pathway; INTERACTS WITH 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dibromophenyl 2,4,5-tribromophenyl ether.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

LOC363005; poly(rC)-binding protein 2

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	PCBP2 (poly(rC) binding protein 2)	HGNC	Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, Panther, Treefam
Mus musculus (house mouse):	Pcbp2 (poly(rC) binding protein 2)	RGD	RGD
Chinchilla lanigera (long-tailed chinchilla):	Pcbp2 (poly(rC) binding protein 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	PCBP2 (poly(rC) binding protein 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	PCBP2 (poly(rC) binding protein 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Pcbp2 (poly(rC) binding protein 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	PCBP2 (poly(rC) binding protein 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	PCBP2 (poly(rC) binding protein 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Pcbp2 (poly(rC) binding protein 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Pcbp2 (poly(rC) binding protein 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	PCBP2 (poly(rC) binding protein 2)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	PCBP2 (poly(rC) binding protein 2)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Mus musculus (house mouse):	Pcbp2 (poly(rC) binding protein 2)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Pcbp2 (poly(rC) binding protein 2)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Danio rerio (zebrafish):	pcbp2 (poly(rC) binding protein 2)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	mub	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	pes-4	Alliance	DIOPT (Ensembl Compara\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	pes-4	Alliance	DIOPT (Ensembl Compara\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Saccharomyces cerevisiae (baker's yeast):	PBP2	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB)
Saccharomyces cerevisiae (baker's yeast):	PBP2	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	pcbp3	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	pcbp2	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	7	135,483,702 - 135,508,254 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	7	135,483,856 - 135,509,412 (+)	Ensembl				GRCr8
mRatBN7.2	7	133,605,375 - 133,631,312 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	7	133,605,573 - 133,629,863 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	7	135,361,121 - 135,385,492 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	7	137,590,488 - 137,614,859 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	7	137,576,736 - 137,601,109 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	7	144,077,901 - 144,103,723 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	7	144,078,496 - 144,101,893 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	7	141,870,034 - 141,895,861 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	7	141,232,766 - 141,253,910 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	7	130,032,877 - 130,056,334 (+)	NCBI		Celera
RGSC_v3.1	8	127,018,657 - 127,020,009 (+)	NCBI
Cytogenetic Map	7	q36	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(-)-demecolcine (ISO)

1,2-dichloroethane (ISO)

1,2-dimethylhydrazine (ISO)

17beta-estradiol (EXP)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2,4-dibromophenyl 2,4,5-tribromophenyl ether (EXP)

4,4'-diaminodiphenylmethane (ISO)

4,4'-sulfonyldiphenol (EXP,ISO)

6-propyl-2-thiouracil (EXP)

actinomycin D (ISO)

amitrole (EXP)

aristolochic acid A (ISO)

arsane (ISO)

arsenic atom (ISO)

arsenite(3-) (ISO)

arsenous acid (ISO)

benzatropine (ISO)

benzo[a]pyrene (ISO)

benzo[a]pyrene diol epoxide I (ISO)

beta-lapachone (ISO)

bis(2-ethylhexyl) phthalate (ISO)

bisphenol A (EXP,ISO)

Bisphenol B (ISO)

bisphenol F (EXP)

bleomycin A2 (ISO)

butanal (ISO)

Butylbenzyl phthalate (ISO)

cadmium atom (ISO)

cadmium dichloride (ISO)

caffeine (ISO)

carbon nanotube (ISO)

choline (ISO)

cisplatin (ISO)

copper atom (ISO)

copper(0) (ISO)

coumarin (ISO)

coumestrol (ISO)

crocidolite asbestos (ISO)

cyclosporin A (ISO)

diarsenic trioxide (ISO)

diquat (ISO)

dorsomorphin (ISO)

enzyme inhibitor (ISO)

etoposide (ISO)

folic acid (ISO)

FR900359 (ISO)

geldanamycin (ISO)

GSK-J4 (ISO)

hydrogen sulfide (ISO)

isoniazide (ISO)

ivermectin (ISO)

L-methionine (ISO)

lead diacetate (EXP)

lead(0) (EXP)

methidathion (ISO)

methimazole (EXP)

methylmercury chloride (ISO)

methylparaben (ISO)

N-methyl-N'-nitro-N-nitrosoguanidine (ISO)

Nutlin-3 (ISO)

ochratoxin A (ISO)

okadaic acid (ISO)

paracetamol (ISO)

parathion (ISO)

phenylmercury acetate (ISO)

phorbol 13-acetate 12-myristate (ISO)

pirinixic acid (ISO)

propanal (ISO)

propiconazole (ISO)

quercetin (EXP)

rotenone (EXP,ISO)

SB 431542 (ISO)

sodium arsenate (ISO)

Soman (EXP)

succimer (ISO)

sunitinib (ISO)

thimerosal (ISO)

titanium dioxide (ISO)

triphenyl phosphate (ISO)

urethane (ISO)

valproic acid (ISO)

vorinostat (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

chromatin looping (ISO)

IRES-dependent viral translational initiation (ISO)

negative regulation of cGAS/STING signaling pathway (ISO)

negative regulation of defense response to virus (ISO)

positive regulation of transcription by RNA polymerase II (IBA,ISO)

proteasome-mediated ubiquitin-dependent protein catabolic process (ISO)

viral RNA genome replication (ISO)

Cellular Component

cytoplasm (IBA,IEA,ISO)

cytosol (ISO)

nucleoplasm (IBA,ISO)

nucleus (IBA,ISO)

postsynaptic density (EXP,IDA)

ribonucleoprotein complex (IEA)

Molecular Function

C-rich single-stranded DNA binding (ISO)

DNA binding (IEA,ISO)

enzyme binding (ISO)

lncRNA binding (ISO)

mRNA binding (IBA)

nucleic acid binding (IEA)

promoter-enhancer loop anchoring activity (ISO)

protein binding (ISO)

RNA binding (IEA,ISO)

single-stranded DNA binding (IBA,IEA,ISO)

ubiquitin protein ligase binding (ISO)

Molecular Pathway Annotations Click to see Annotation Detail View

iron homeostasis pathway (ISO)

iron storage pathway (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Regulators of Iron Homeostasis: New Players in Metabolism, Cell Death, and Disease.	Bogdan AR, etal., Trends Biochem Sci. 2016 Mar;41(3):274-86. doi: 10.1016/j.tibs.2015.11.012. Epub 2015 Dec 23.
2.	Relative and absolute quantification of postsynaptic density proteome isolated from rat forebrain and cerebellum.	Cheng D, etal., Mol Cell Proteomics. 2006 Jun;5(6):1158-70. doi: 10.1074/mcp.D500009-MCP200. Epub 2006 Feb 28.
3.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
4.	Cellular iron uptake, trafficking and metabolism: Key molecules and mechanisms and their roles in disease.	Lane DJ, etal., Biochim Biophys Acta. 2015 May;1853(5):1130-44. doi: 10.1016/j.bbamcr.2015.01.021. Epub 2015 Feb 4.
5.	GOA pipeline	RGD automated data pipeline
6.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
7.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
8.	Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences.	Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11.

Additional References at PubMed

PMID:7607214	PMID:8208614	PMID:8367306	PMID:8871564	PMID:12414943	PMID:19029303	PMID:19881509	PMID:19946888	PMID:21423176	PMID:21643860	PMID:22082260	PMID:22658674
PMID:22681889	PMID:22720776	PMID:23376485	PMID:23533145	PMID:24625528	PMID:25463520	PMID:26250704	PMID:27209304	PMID:35089637

Genomics

Comparative Map Data

Pcbp2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	7	135,483,702 - 135,508,254 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	7	135,483,856 - 135,509,412 (+)	Ensembl				GRCr8
mRatBN7.2	7	133,605,375 - 133,631,312 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	7	133,605,573 - 133,629,863 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	7	135,361,121 - 135,385,492 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	7	137,590,488 - 137,614,859 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	7	137,576,736 - 137,601,109 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	7	144,077,901 - 144,103,723 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	7	144,078,496 - 144,101,893 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	7	141,870,034 - 141,895,861 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	7	141,232,766 - 141,253,910 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	7	130,032,877 - 130,056,334 (+)	NCBI		Celera
RGSC_v3.1	8	127,018,657 - 127,020,009 (+)	NCBI
Cytogenetic Map	7	q36	NCBI

PCBP2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	12	53,452,102 - 53,481,162 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	12	53,451,900 - 53,481,162 (+)	Ensembl			hg38	GRCh38
GRCh37	12	53,845,886 - 53,874,946 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	12	52,132,161 - 52,159,872 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Celera	12	53,496,252 - 53,525,328 (+)	NCBI		Celera
Cytogenetic Map	12	q13.13	NCBI
HuRef	12	50,885,765 - 50,914,832 (+)	NCBI		HuRef
CHM1_1	12	53,813,009 - 53,841,996 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	12	53,418,139 - 53,447,209 (+)	NCBI		T2T-CHM13v2.0

Pcbp2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	15	102,378,974 - 102,408,503 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	15	102,378,974 - 102,408,496 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	15	102,470,450 - 102,500,068 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	15	102,470,539 - 102,500,061 (+)	Ensembl			mm10	GRCm38
MGSCv37	15	102,301,063 - 102,330,490 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	15	102,298,818 - 102,326,915 (+)	NCBI		MGSCv36	mm8
Celera	15	104,628,756 - 104,658,034 (+)	NCBI		Celera
Cytogenetic Map	15	F3	NCBI
cM Map	15	57.61	NCBI

Pcbp2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955458	750,226 - 773,483 (+)	Ensembl
ChiLan1.0	NW_004955458	747,770 - 773,885 (+)	NCBI	ChiLan1.0	ChiLan1.0

PCBP2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	10	40,704,803 - 40,732,587 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	12	40,701,567 - 40,729,348 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	12	35,273,540 - 35,301,292 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	12	36,061,236 - 36,083,171 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	12	36,058,463 - 36,082,672 (-)	Ensembl			panPan2	panpan1.1

PCBP2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	27	1,736,264 - 1,759,416 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
Dog10K_Boxer_Tasha	27	44,491,349 - 44,514,087 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	27	1,740,122 - 1,762,814 (-)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	27	1,740,124 - 1,762,938 (-)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	27	1,757,638 - 1,780,344 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	27	1,740,925 - 1,764,273 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	27	44,893,044 - 44,915,768 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Pcbp2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404945	62,409,574 - 62,432,674 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936512	10,732,151 - 10,756,912 (+)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936512	10,732,129 - 10,754,885 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

PCBP2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	5	18,673,981 - 18,704,978 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	5	18,670,124 - 18,703,745 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	5	19,109,650 - 19,139,327 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

PCBP2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	11	49,548,615 - 49,580,962 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
Vero_WHO_p1.0	NW_023666037	196,471,848 - 196,501,677 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Pcbp2
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624904	1,555,635 - 1,578,982 (+)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624904	1,553,253 - 1,579,212 (+)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Pcbp2
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	1	260,582,567 - 260,608,439 (-)	NCBI		Rrattus_CSIRO_v1

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	14
Count of miRNA genes:	12
Interacting mature miRNAs:	14
Transcripts:	ENSRNOT00000055302
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1354582	Stl11	Serum triglyceride level QTL 11	3.42		blood triglyceride amount (VT:0002644)	serum triglyceride level (CMO:0000360)	7	121393075	137014596	Rat
634331	Pia17	Pristane induced arthritis QTL 17	4.7		joint integrity trait (VT:0010548)	arthritic paw count (CMO:0001460)	7	132099939	137014596	Rat
731176	Glom5	Glomerulus QTL 5	2.5	0.0035	kidney glomerulus morphology trait (VT:0005325)	count of superficial glomeruli not directly contacting the kidney surface (CMO:0001002)	7	98549867	137014596	Rat
1300112	Bp183	Blood pressure QTL 183	3.51		arterial blood pressure trait (VT:2000000)	blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)	7	119280025	135560836	Rat
61428	Scl3	Serum cholesterol level QTL 3	3.2		blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	7	100548246	137014596	Rat
61397	Bw17	Body weight QTL 17	6.3		body mass (VT:0001259)	body weight (CMO:0000012)	7	95485047	137014596	Rat
1358914	Bp266	Blood pressure QTL 266			arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	7	115313999	136544683	Rat
1549899	Stresp8	Stress response QTL 8	4.37	0.0008	stress-related behavior trait (VT:0010451)	defensive burying duration (CMO:0001961)	7	92362341	137014596	Rat
1358891	Bp265	Blood pressure QTL 265	2.21		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	7	71827901	136544683	Rat
1357339	Stl14	Serum triglyceride level QTL 14	3.45	0.0001	blood triglyceride amount (VT:0002644)	serum triglyceride level (CMO:0000360)	7	135371291	137014596	Rat

Markers in Region

BF389691

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	7	133,617,553 - 133,617,724 (+)	MAPPER	mRatBN7.2
Rnor_6.0	7	144,089,966 - 144,090,136	NCBI	Rnor6.0
Rnor_5.0	7	141,882,099 - 141,882,269	UniSTS	Rnor5.0
RGSC_v3.4	7	141,241,933 - 141,242,103	UniSTS	RGSC3.4
Celera	7	130,044,160 - 130,044,330	UniSTS
RH 3.4 Map	7	1063.0	UniSTS
Cytogenetic Map	7	q36	UniSTS

UniSTS:479190

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	8	17,857,161 - 17,857,720 (+)	MAPPER	mRatBN7.2
mRatBN7.2	3	126,175,996 - 126,176,439 (+)	MAPPER	mRatBN7.2
Rnor_6.0	3	131,919,046 - 131,919,488	NCBI	Rnor6.0
Rnor_6.0	8	20,133,248 - 20,133,806	NCBI	Rnor6.0
Rnor_5.0	8	20,206,505 - 20,207,063	UniSTS	Rnor5.0
Rnor_5.0	3	138,381,617 - 138,382,059	UniSTS	Rnor5.0
RGSC_v3.4	3	126,978,862 - 126,979,304	UniSTS	RGSC3.4
RGSC_v3.4	8	18,313,309 - 18,313,867	UniSTS	RGSC3.4
Celera	8	19,269,553 - 19,270,111	UniSTS
Celera	3	124,858,833 - 124,859,275	UniSTS
Cytogenetic Map	3	q36	UniSTS
Cytogenetic Map	8	q13	UniSTS
Cytogenetic Map	7	q36	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	165	91	90	59	92	59	6	356	192	11	144	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001013223	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006242418	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006242419	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006242420	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006242422	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006242425	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006242427	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017595006	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017595007	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017595010	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017595011	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017595012	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017595014	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039079651	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063263962	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063263963	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063263964	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063263965	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063263966	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063263967	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063263969	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063263970	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063263971	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063263972	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063263973	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063263974	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063263975	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063263976	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063263978	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063263979	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063263980	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063263981	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063263982	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063263983	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063263985	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063263986	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063263987	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063263988	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063263989	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063263990	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063263991	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063263992	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063263994	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063263995	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063263996	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063263997	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063263998	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063263999	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063264000	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063264001	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063264003	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063264004	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC109743	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC078906	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC078909	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC097410	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH474035	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ216778	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ220695	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ220700	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ231388	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000007	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000055302 ⟹ ENSRNOP00000052173

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	7	135,484,545 - 135,508,273 (+)	Ensembl
mRatBN7.2 Ensembl	7	133,606,079 - 133,629,482 (+)	Ensembl
Rnor_6.0 Ensembl	7	144,078,496 - 144,101,893 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000077687 ⟹ ENSRNOP00000075740

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	7	135,486,723 - 135,502,353 (+)	Ensembl
mRatBN7.2 Ensembl	7	133,608,145 - 133,623,832 (+)	Ensembl
Rnor_6.0 Ensembl	7	144,080,614 - 144,101,773 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000099581 ⟹ ENSRNOP00000095661

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	7	135,486,723 - 135,509,412 (+)	Ensembl
mRatBN7.2 Ensembl	7	133,605,573 - 133,629,863 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000105769 ⟹ ENSRNOP00000085087

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	7	135,483,904 - 135,504,874 (+)	Ensembl
mRatBN7.2 Ensembl	7	133,605,592 - 133,629,723 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000109477 ⟹ ENSRNOP00000093976

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	7	135,483,856 - 135,508,054 (+)	Ensembl
mRatBN7.2 Ensembl	7	133,605,592 - 133,629,723 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000111669 ⟹ ENSRNOP00000081612

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	7	135,483,904 - 135,508,251 (+)	Ensembl
mRatBN7.2 Ensembl	7	133,605,592 - 133,629,723 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000120216 ⟹ ENSRNOP00000095172

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	7	135,483,904 - 135,504,874 (+)	Ensembl
mRatBN7.2 Ensembl	7	133,605,588 - 133,629,723 (+)	Ensembl

RefSeq Acc Id:

NM_001013223 ⟹ NP_001013241

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	135,483,901 - 135,508,254 (+)	NCBI
mRatBN7.2	7	133,605,375 - 133,629,733 (+)	NCBI
Rnor_6.0	7	144,077,906 - 144,102,139 (+)	NCBI
Rnor_5.0	7	141,870,034 - 141,895,861 (+)	NCBI
RGSC_v3.4	7	141,232,766 - 141,253,910 (+)	RGD
Celera	7	130,032,877 - 130,056,334 (+)	RGD

Sequence:

show sequence

TTCGCCCTTCCTCCTCCTCCACCCCCCCTCCTCCGCCCGCTAGCGGGGCCCCCCTCGCCTTCCC
GCCCGCCCCTATTGTTCCGCCCCCGGCCTCCCGCCCTTCCCCTTCCCGCCCGCTCCCCTTTTCC
CCTCAGTCGACTCGCGCCTCCAGTTTTTGGCTTTCACTCTCACCAGTGACCAAAGACTTGACCA
CTCAAAGTCCAGCTCCCTGTAACTGCTAGACATGGACACCGGTGTGATTGAAGGTGGATTAAAT
GTCACTCTCACCATCAGGCTACTTATGCACGGAAAGGAAGTTGGCAGTATCATCGGAAAGAAAG
GAGAATCTGTTAAGAAGATGCGCGAGGAGAGTGGTGCACGTATCAACATCTCAGAAGGGAATTG
TCCTGAGAGAATTATAACTTTGGCTGGACCGACTAATGCCATCTTCAAAGCCTTTGCTATGATC
ATTGACAAACTGGAAGAGGACATAAGCAGCTCTATGACCAATAGCACAGCTGCCAGTAGACCCC
CGGTTACCTTACGGCTGGTGGTTCCTGCTAGTCAGTGTGGCTCTCTTATTGGAAAAGGTGGTTG
CAAGATCAAGGAAATAAGAGAGAGTACAGGGGCTCAGGTCCAGGTGGCAGGGGATATGCTCCCC
AACTCAACTGAGCGAGCAATCACTATTGCTGGCATTCCGCAGTCCATCATTGAGTGTGTCAAAC
AGATCTGCGTGGTCATGTTGGAGACTCTCTCCCAGTCCCCCCCGAAGGGCGTGACCATCCCGTA
CCGGCCCAAGCCCTCCAGTTCTCCAGTCATCTTTGCAGGTGGTCAGGACAGGTACAGCACAGGC
AGCGACAGTGCGAGCTTTCCCCACACCACCCCGTCCATGTGCCTCAACCCTGACCTGGAGGGAC
CACCTCTAGAGGCCTATACCATTCAAGGACAGTATGCCATTCCACAGCCAGATTTGACCAAGCT
GCACCAGTTGGCAATGCAACAGTCTCATTTTCCCATGACCCATGGCAACACCGGATTCAGTGGC
ATTGAATCCAGCTCTCCAGAGGTGAAAGGCTATTGGGGTTTGGATGCATCTGCTCAAACTACTT
CTCATGAACTCACCATTCCAAATGATTTGATTGGCTGCATAATTGGGCGTCAGGGCGCCAAAAT
CAATGAGATCCGTCAGATGTCTGGGGCGCAGATCAAAATTGCAAACCCAGTGGAAGGATCTACT
GATCGGCAGGTTACCATCACTGGATCTGCTGCCAGCATTAGTCTGGCTCAGTATCTAATCAATG
TCAGGCTTTCCTCGGAGACAGGTGGCATGGGGAGCAGCTAGAACAGAGCAGATTCATCCATAAT
CCCTTTCTGCTGTTCACCACCACCCATGATCCATCTGTGTAGTTTCTGAACAGTCAGCGATTCC
AGGTTTTAAATAGTTTGTAAATTTTCAGTTTCTACACACTTTATCATCCACTCATGATTTTTTA
ATTAAAGTGTTTTAATTCTTTTCTCTGTTCAGCAGTTACGCTGAGATATCCATATTTAGTTTTA
TAAGCTTCTCCCCCTTTTTTGTTTTGTTTTGTTTTTTTTTTTTGGCTCATGAATTTTTGTTTGT
CATGGAAATGTAAGAGTGGATTATTAATACATTTCAGTTTAGTTCTGTAATGTCAGGAATTTTT
CAAAAAAAGAATTAAAAGATGGAAAAAAAAAAAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_006242418 ⟹ XP_006242480

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	135,483,861 - 135,508,254 (+)	NCBI
mRatBN7.2	7	133,605,484 - 133,631,312 (+)	NCBI
Rnor_6.0	7	144,077,901 - 144,103,723 (+)	NCBI
Rnor_5.0	7	141,870,034 - 141,895,861 (+)	NCBI

Sequence:

show sequence

TCTCTTTCCCCCTTCCTCCTCCTCCACCCCCCCTCCTCCGCCCGCTAGCGGGGCCCCCCTCGCC
TTCCCGCCCGCCCCTATTGTTCCGCCCCCGGCCTCCCGCCCTTCCCCTTCCCGCCCGCTCCCCT
TTTCCCCTCAGTCGACTCGCGCCTCCAGTTTTTGGCTTTCACTCTCACCAGTGACCAAAGACTT
GACCACTCAAAGTCCAGCTCCCTGTAACTGCTAGACATGGACACCGGTGTGATTGAAGGTGGAT
TAAATGTCACTCTCACCATCAGGCTACTTATGCACGGAAAGGAAGTTGGCAGTATCATCGGAAA
GAAAGGAGAATCTGTTAAGAAGATGCGCGAGGAGAGTGGTGCACGTATCAACATCTCAGAAGGG
AATTGTCCTGAGAGAATTATAACTTTGGCTGGACCGACTAATGCCATCTTCAAAGCCTTTGCTA
TGATCATTGACAAACTGGAAGAGGACATAAGCAGCTCTATGACCAATAGCACAGCTGCCAGTAG
ACCCCCGGTTACCTTACGGCTGGTGGTTCCTGCTAGTCAGTGTGGCTCTCTTATTGGAAAAGGT
GGTTGCAAGATCAAGGAAATAAGAGAGAGTACAGGGGCTCAGGTCCAGGTGGCAGGGGATATGC
TCCCCAACTCAACTGAGCGAGCAATCACTATTGCTGGCATTCCGCAGTCCATCATTGAGTGTGT
CAAACAGATCTGCGTGGTCATGTTGGAGTCCCCCCCGAAGGGCGTGACCATCCCGTACCGGCCC
AAGCCCTCCAGTTCTCCAGTCATCTTTGCAGGTGGTCAGGACAGGTACAGCACAGGCAGCGACA
GTGCGAGCTTTCCCCACACCACCCCGTCCATGTGCCTCAACCCTGACCTGGAGGGACCACCTCT
AGAGGCCTATACCATTCAAGGACAGTATGCCATTCCACAGCCAGATTTGACCAAGCTGCACCAG
TTGGCAATGCAACAGTCTCATTTTCCCATGACCCATGGCAACACCGGATTCAGTGGCATTGAAT
CCAGCTCTCCAGAGGTGAAAGGCTATTGGGCAGGTTTGGATGCATCTGCTCAAACTACTTCTCA
TGAACTCACCATTCCAAATGATTTGATTGGCTGCATAATTGGGCGTCAGGGCGCCAAAATCAAT
GAGATCCGTCAGATGTCTGGGGCGCAGATCAAAATTGCAAACCCAGTGGAAGGATCTACTGATC
GGCAGGTTACCATCACTGGATCTGCTGCCAGCATTAGTCTGGCTCAGTATCTAATCAATGTCAG
GCTTTCCTCGGAGACAGGTGGCATGGGGAGCAGCTAGAACAGAGCAGATTCATCCATAATCCCT
TTCTGCTGTTCACCACCACCCATGATCCATCTGTGTAGTTTCTGAACAGTCAGCGATTCCAGGT
TTTAAATAGTTTGTAAATTTTCAGTTTCTACACACTTTATCATCCACTCATGATTTTTTAATTA
AAGTGTTTTAATTCTTTTCTCTGTTCAGCAGTTACGCTGAGATATCCATATTTAGTTTTATAAG
CTTCTCCCCCTTTTTTGTTTTGTTTTGTTTTTTTTTTTTGGCTCATGAATTTTTGTTTGTCATG
GAAATGTAAGAGTGGATTATTAATACATTTCAGTTTAGTTCTGTAATGTCAGGAATTTTTCAAA
AAAAGAATTAAAAGATGGACTGGAGCTTTTTCTTTGTGAATAGAAACTGGATGCCACAGTGACT
TATGCGGGTGTTATTCCTGTCTGATACTATTTTTATAGAGCCCTGATTCCATTTAAATAGAATT
AGTGGACTTCCTTTTTTACCACTCCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTAATTTGC
CCTCAATCTTTTCCCCCCCATGATCCTGGGTGGCCTCTGAAGACTGACAGTCACACTTACCCTG
GGATTGTACAGCAGCATTGTACAGTGCATTTATGGAGCTGGGACAGGAAGGTGTCGATTGGAAG
CTTGAGAATCACTGCCTCGTGCATACTTTAATTTTAAAGTCTAGTAATCATTTAGTTTTCTCCA
CAGGTGTTGTGAGACCTTGTGTTCTTGTCCTGAAATCATTTAGAAAAGTTTACCTGCTGCCATT
TATGTTAACTTAGAAAGTAACTTATCCAAATTCCTCAGGTAAAATCTTAAATCCAAGACTTAAT
CCATGTATTACCACTCCACTCATTCACCAAGAAAACCCTCGACAGTTGGGCCTGCATGGAGTGG
TTATATTTCAGGGTTGTTCACAGGGGTTACAATATGACAGTCCCCACCCCTACCAGGCACCAGA
TAACAGCGGGGACTTAACCAGCACCCAGTTCTTCAGCCTGAGCCATCACATGCTATTAATCTTC
TAACTTGCCTCTGGGCCCAAAGCCAGGGCTTTGGCAGAGAAACAGGAACAAAGAAATGAGTTAC
ATTGCCACCTGAGAAACCTCAGAGGGAGGACCTAGGACCCAGCCTTAGTTTCCCTCCTCCCAAG
TGCAAAATGTGTAAACAGTAAACGGAAAATAAAAGTGCAGTTTTAAGTGAATCCTCTTCCTGCC
CCCCATGTTTAGGGACAGACAGTGTAGAGACAAGCCTGGCTTTTCTATGCCTACTTGCTTGTTC
AACATAAGGAATGGGGTGAAGCAAGAAGGGACCGGTGTCCTTTCCTTACAGCTCTAGGGTAGTA
CTTGGAGTCATTTCCACAGCTGCCAGTGTCCCTAGAACTTAATTGGTCAGGGGCGTCGTTCACT
CTGAAGCCTGACTTACGGCTAAGAAAGCCCCGTCTATCTGTTGATTATGTGGCGCATATATATT
ATTTATATAAATATTTCTCTATGTACAAGGAATAAGAGTGTCTTTCATGGAGGAAGGGAGGCTG
GGGGCCGCAAGGCATCAATGCTGTTGGAGTTGTCCAATTCAGTGCTGTCACAGTCTGAGTCCTC
AGGATTGGGGCCCTGTGAAGAGTAGAAATGCAGTGAAGTGGGGGAGCTCAGCATCTTTTAGCAT
TACAGATTCTTTGAGGGCCCTCAGTGGGGTGCTTTTACATTATCAGTGGAGGTGAGGTTTTTTT
CTTTTTTTAAAATCTCACTGTTGATAGGTCATGCTCCAAGGCACTAGGCAGACTCCTTTTAGGA
TACTCTGACTGCAGTGTATTGCTGTCATACAAGTTAAACCTCTGGCACTATATACTTGGATATT
TGTTTTAATGGTTCTGGAAAAAATTGGTGGCTTGAAGGCTAAATAAATACCTTTTGTAGGTTAG
TCA

hide sequence

RefSeq Acc Id:

XM_006242419 ⟹ XP_006242481

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	135,483,759 - 135,508,254 (+)	NCBI
mRatBN7.2	7	133,605,482 - 133,631,312 (+)	NCBI
Rnor_6.0	7	144,077,950 - 144,103,723 (+)	NCBI
Rnor_5.0	7	141,870,034 - 141,895,861 (+)	NCBI

Sequence:

show sequence

GGGGCCCCCCTCGCCTTCCCGCCCGCCCCTATTGTTCCGCCCCCGGCCTCCCGCCCTTCCCCTT
CCCGCCCGCTCCCCTTTTCCCCTCAGTCGACTCGCGCCTCCAGTGACCAAAGACTTGACCACTC
AAAGTCCAGCTCCCTGTAACTGCTAGACATGGACACCGGTGTGATTGAAGGTGGATTAAATGTC
ACTCTCACCATCAGGCTACTTATGCACGGAAAGGAAGTTGGCAGTATCATCGGAAAGAAAGGAG
AATCTGTTAAGAAGATGCGCGAGGAGAGTGGTGCACGTATCAACATCTCAGAAGGGAATTGTCC
TGAGAGAATTATAACTTTGGCTGGACCGACTAATGCCATCTTCAAAGCCTTTGCTATGATCATT
GACAAACTGGAAGAGGACATAAGCAGCTCTATGACCAATAGCACAGCTGCCAGTAGACCCCCGG
TTACCTTACGGCTGGTGGTTCCTGCTAGTCAGTGTGGCTCTCTTATTGGAAAAGGTGGTTGCAA
GATCAAGGAAATAAGAGAGAGTACAGGGGCTCAGGTCCAGGTGGCAGGGGATATGCTCCCCAAC
TCAACTGAGCGAGCAATCACTATTGCTGGCATTCCGCAGTCCATCATTGAGTGTGTCAAACAGA
TCTGCGTGGTCATGTTGGAGTCCCCCCCGAAGGGCGTGACCATCCCGTACCGGCCCAAGCCCTC
CAGTTCTCCAGTCATCTTTGCAGGTGGTCAGGACAGGTACAGCACAGGCAGCGACAGTGCGAGC
TTTCCCCACACCACCCCGTCCATGTGCCTCAACCCTGACCTGGAGGGACCACCTCTAGAGGCCT
ATACCATTCAAGGACAGTATGCCATTCCACAGCCAGATTTGACCAAGCTGCACCAGTTGGCAAT
GCAACAGTCTCATTTTCCCATGACCCATGGCAACACCGGATTCAGTGGCATTGAATCCAGCTCT
CCAGAGGTGAAAGGCTATTGGGCAGGTTTGGATGCATCTGCTCAAACTACTTCTCATGAACTCA
CCATTCCAAATGATTTGATTGGCTGCATAATTGGGCGTCAGGGCGCCAAAATCAATGAGATCCG
TCAGATGTCTGGGGCGCAGATCAAAATTGCAAACCCAGTGGAAGGATCTACTGATCGGCAGGTT
ACCATCACTGGATCTGCTGCCAGCATTAGTCTGGCTCAGTATCTAATCAATGTCAGGCTTTCCT
CGGAGACAGGTGGCATGGGGAGCAGCTAGAACAGAGCAGATTCATCCATAATCCCTTTCTGCTG
TTCACCACCACCCATGATCCATCTGTGTAGTTTCTGAACAGTCAGCGATTCCAGGTTTTAAATA
GTTTGTAAATTTTCAGTTTCTACACACTTTATCATCCACTCATGATTTTTTAATTAAAGTGTTT
TAATTCTTTTCTCTGTTCAGCAGTTACGCTGAGATATCCATATTTAGTTTTATAAGCTTCTCCC
CCTTTTTTGTTTTGTTTTGTTTTTTTTTTTTGGCTCATGAATTTTTGTTTGTCATGGAAATGTA
AGAGTGGATTATTAATACATTTCAGTTTAGTTCTGTAATGTCAGGAATTTTTCAAAAAAAGAAT
TAAAAGATGGACTGGAGCTTTTTCTTTGTGAATAGAAACTGGATGCCACAGTGACTTATGCGGG
TGTTATTCCTGTCTGATACTATTTTTATAGAGCCCTGATTCCATTTAAATAGAATTAGTGGACT
TCCTTTTTTACCACTCCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTAATTTGCCCTCAATC
TTTTCCCCCCCATGATCCTGGGTGGCCTCTGAAGACTGACAGTCACACTTACCCTGGGATTGTA
CAGCAGCATTGTACAGTGCATTTATGGAGCTGGGACAGGAAGGTGTCGATTGGAAGCTTGAGAA
TCACTGCCTCGTGCATACTTTAATTTTAAAGTCTAGTAATCATTTAGTTTTCTCCACAGGTGTT
GTGAGACCTTGTGTTCTTGTCCTGAAATCATTTAGAAAAGTTTACCTGCTGCCATTTATGTTAA
CTTAGAAAGTAACTTATCCAAATTCCTCAGGTAAAATCTTAAATCCAAGACTTAATCCATGTAT
TACCACTCCACTCATTCACCAAGAAAACCCTCGACAGTTGGGCCTGCATGGAGTGGTTATATTT
CAGGGTTGTTCACAGGGGTTACAATATGACAGTCCCCACCCCTACCAGGCACCAGATAACAGCG
GGGACTTAACCAGCACCCAGTTCTTCAGCCTGAGCCATCACATGCTATTAATCTTCTAACTTGC
CTCTGGGCCCAAAGCCAGGGCTTTGGCAGAGAAACAGGAACAAAGAAATGAGTTACATTGCCAC
CTGAGAAACCTCAGAGGGAGGACCTAGGACCCAGCCTTAGTTTCCCTCCTCCCAAGTGCAAAAT
GTGTAAACAGTAAACGGAAAATAAAAGTGCAGTTTTAAGTGAATCCTCTTCCTGCCCCCCATGT
TTAGGGACAGACAGTGTAGAGACAAGCCTGGCTTTTCTATGCCTACTTGCTTGTTCAACATAAG
GAATGGGGTGAAGCAAGAAGGGACCGGTGTCCTTTCCTTACAGCTCTAGGGTAGTACTTGGAGT
CATTTCCACAGCTGCCAGTGTCCCTAGAACTTAATTGGTCAGGGGCGTCGTTCACTCTGAAGCC
TGACTTACGGCTAAGAAAGCCCCGTCTATCTGTTGATTATGTGGCGCATATATATTATTTATAT
AAATATTTCTCTATGTACAAGGAATAAGAGTGTCTTTCATGGAGGAAGGGAGGCTGGGGGCCGC
AAGGCATCAATGCTGTTGGAGTTGTCCAATTCAGTGCTGTCACAGTCTGAGTCCTCAGGATTGG
GGCCCTGTGAAGAGTAGAAATGCAGTGAAGTGGGGGAGCTCAGCATCTTTTAGCATTACAGATT
CTTTGAGGGCCCTCAGTGGGGTGCTTTTACATTATCAGTGGAGGTGAGGTTTTTTTCTTTTTTT
AAAATCTCACTGTTGATAGGTCATGCTCCAAGGCACTAGGCAGACTCCTTTTAGGATACTCTGA
CTGCAGTGTATTGCTGTCATACAAGTTAAACCTCTGGCACTATATACTTGGATATTTGTTTTAA
TGGTTCTGGAAAAAATTGGTGGCTTGAAGGCTAAATAAATACCTTTTGTAGGTTAGTCA

hide sequence

RefSeq Acc Id:

XM_006242420 ⟹ XP_006242482

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	135,483,702 - 135,508,254 (+)	NCBI
mRatBN7.2	7	133,605,484 - 133,631,312 (+)	NCBI
Rnor_6.0	7	144,077,901 - 144,103,723 (+)	NCBI
Rnor_5.0	7	141,870,034 - 141,895,861 (+)	NCBI

Sequence:

show sequence

TCTCTTTCCCCCTTCCTCCTCCTCCACCCCCCCTCCTCCGCCCGCTAGCGGGGCCCCCCTCGCC
TTCCCGCCCGCCCCTATTGTTCCGCCCCCGGCCTCCCGCCCTTCCCCTTCCCGCCCGCTCCCCT
TTTCCCCTCAGTCGACTCGCGCCTCCAGTTTTTGGCTTTCACTCTCACCAGTGACCAAAGACTT
GACCACTCAAAGTCCAGCTCCCTGTAACTGCTAGACATGGACACCGGTGTGATTGAAGGTGGAT
TAAATGTCACTCTCACCATCAGGCTACTTATGCACGGAAAGGAAGTTGGCAGTATCATCGGAAA
GAAAGGAGAATCTGTTAAGAAGATGCGCGAGGAGAGTGGTGCACGTATCAACATCTCAGAAGGG
AATTGTCCTGAGAGAATTATAACTTTGGCTGGACCGACTAATGCCATCTTCAAAGCCTTTGCTA
TGATCATTGACAAACTGGAAGAGGACATAAGCAGCTCTATGACCAATAGCACAGCTGCCAGTAG
ACCCCCGGTTACCTTACGGCTGGTGGTTCCTGCTAGTCAGTGTGGCTCTCTTATTGGAAAAGGT
GGTTGCAAGATCAAGGAAATAAGAGAGAGTACAGGGGCTCAGGTCCAGGTGGCAGGGGATATGC
TCCCCAACTCAACTGAGCGAGCAATCACTATTGCTGGCATTCCGCAGTCCATCATTGAGTGTGT
CAAACAGATCTGCGTGGTCATGTTGGAGTCCCCCCCGAAGGGCGTGACCATCCCGTACCGGCCC
AAGCCCTCCAGTTCTCCAGTCATCTTTGCAGGTGGTCAGGACAGGTACAGCACAGGCAGCGACA
GTGCGAGCTTTCCCCACACCACCCCGTCCATGTGCCTCAACCCTGACCTGGAGGGACCACCTCT
AGAGGCCTATACCATTCAAGGACAGTATGCCATTCCACAGCCAGATTTGACCAAGCTGCACCAG
TTGGCAATGCAACAGTCTCATTTTCCCATGACCCATGGCAACACCGGATTCAGTGGCATTGAAT
CCAGCTCTCCAGAGGTGAAAGGCTATTGGGGTTTGGATGCATCTGCTCAAACTACTTCTCATGA
ACTCACCATTCCAAATGATTTGATTGGCTGCATAATTGGGCGTCAGGGCGCCAAAATCAATGAG
ATCCGTCAGATGTCTGGGGCGCAGATCAAAATTGCAAACCCAGTGGAAGGATCTACTGATCGGC
AGGTTACCATCACTGGATCTGCTGCCAGCATTAGTCTGGCTCAGTATCTAATCAATGTCAGGCT
TTCCTCGGAGACAGGTGGCATGGGGAGCAGCTAGAACAGAGCAGATTCATCCATAATCCCTTTC
TGCTGTTCACCACCACCCATGATCCATCTGTGTAGTTTCTGAACAGTCAGCGATTCCAGGTTTT
AAATAGTTTGTAAATTTTCAGTTTCTACACACTTTATCATCCACTCATGATTTTTTAATTAAAG
TGTTTTAATTCTTTTCTCTGTTCAGCAGTTACGCTGAGATATCCATATTTAGTTTTATAAGCTT
CTCCCCCTTTTTTGTTTTGTTTTGTTTTTTTTTTTTGGCTCATGAATTTTTGTTTGTCATGGAA
ATGTAAGAGTGGATTATTAATACATTTCAGTTTAGTTCTGTAATGTCAGGAATTTTTCAAAAAA
AGAATTAAAAGATGGACTGGAGCTTTTTCTTTGTGAATAGAAACTGGATGCCACAGTGACTTAT
GCGGGTGTTATTCCTGTCTGATACTATTTTTATAGAGCCCTGATTCCATTTAAATAGAATTAGT
GGACTTCCTTTTTTACCACTCCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTAATTTGCCCT
CAATCTTTTCCCCCCCATGATCCTGGGTGGCCTCTGAAGACTGACAGTCACACTTACCCTGGGA
TTGTACAGCAGCATTGTACAGTGCATTTATGGAGCTGGGACAGGAAGGTGTCGATTGGAAGCTT
GAGAATCACTGCCTCGTGCATACTTTAATTTTAAAGTCTAGTAATCATTTAGTTTTCTCCACAG
GTGTTGTGAGACCTTGTGTTCTTGTCCTGAAATCATTTAGAAAAGTTTACCTGCTGCCATTTAT
GTTAACTTAGAAAGTAACTTATCCAAATTCCTCAGGTAAAATCTTAAATCCAAGACTTAATCCA
TGTATTACCACTCCACTCATTCACCAAGAAAACCCTCGACAGTTGGGCCTGCATGGAGTGGTTA
TATTTCAGGGTTGTTCACAGGGGTTACAATATGACAGTCCCCACCCCTACCAGGCACCAGATAA
CAGCGGGGACTTAACCAGCACCCAGTTCTTCAGCCTGAGCCATCACATGCTATTAATCTTCTAA
CTTGCCTCTGGGCCCAAAGCCAGGGCTTTGGCAGAGAAACAGGAACAAAGAAATGAGTTACATT
GCCACCTGAGAAACCTCAGAGGGAGGACCTAGGACCCAGCCTTAGTTTCCCTCCTCCCAAGTGC
AAAATGTGTAAACAGTAAACGGAAAATAAAAGTGCAGTTTTAAGTGAATCCTCTTCCTGCCCCC
CATGTTTAGGGACAGACAGTGTAGAGACAAGCCTGGCTTTTCTATGCCTACTTGCTTGTTCAAC
ATAAGGAATGGGGTGAAGCAAGAAGGGACCGGTGTCCTTTCCTTACAGCTCTAGGGTAGTACTT
GGAGTCATTTCCACAGCTGCCAGTGTCCCTAGAACTTAATTGGTCAGGGGCGTCGTTCACTCTG
AAGCCTGACTTACGGCTAAGAAAGCCCCGTCTATCTGTTGATTATGTGGCGCATATATATTATT
TATATAAATATTTCTCTATGTACAAGGAATAAGAGTGTCTTTCATGGAGGAAGGGAGGCTGGGG
GCCGCAAGGCATCAATGCTGTTGGAGTTGTCCAATTCAGTGCTGTCACAGTCTGAGTCCTCAGG
ATTGGGGCCCTGTGAAGAGTAGAAATGCAGTGAAGTGGGGGAGCTCAGCATCTTTTAGCATTAC
AGATTCTTTGAGGGCCCTCAGTGGGGTGCTTTTACATTATCAGTGGAGGTGAGGTTTTTTTCTT
TTTTTAAAATCTCACTGTTGATAGGTCATGCTCCAAGGCACTAGGCAGACTCCTTTTAGGATAC
TCTGACTGCAGTGTATTGCTGTCATACAAGTTAAACCTCTGGCACTATATACTTGGATATTTGT
TTTAATGGTTCTGGAAAAAATTGGTGGCTTGAAGGCTAAATAAATACCTTTTGTAGGTTAGTCA

hide sequence

RefSeq Acc Id:

XM_006242422 ⟹ XP_006242484

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	135,483,900 - 135,508,254 (+)	NCBI
mRatBN7.2	7	133,605,484 - 133,631,312 (+)	NCBI
Rnor_6.0	7	144,077,901 - 144,103,723 (+)	NCBI
Rnor_5.0	7	141,870,034 - 141,895,861 (+)	NCBI

Sequence:

show sequence

TCTCTTTCCCCCTTCCTCCTCCTCCACCCCCCCTCCTCCGCCCGCTAGCGGGGCCCCCCTCGCC
TTCCCGCCCGCCCCTATTGTTCCGCCCCCGGCCTCCCGCCCTTCCCCTTCCCGCCCGCTCCCCT
TTTCCCCTCAGTCGACTCGCGCCTCCAGTTTTTGGCTTTCACTCTCACCAGTGACCAAAGACTT
GACCACTCAAAGTCCAGCTCCCTGTAACTGCTAGACATGGACACCGGTGTGATTGAAGGTGGAT
TAAATGTCACTCTCACCATCAGGCTACTTATGCACGGAAAGGAAGTTGGCAGTATCATCGGAAA
GAAAGGAGAATCTGTTAAGAAGATGCGCGAGGAGAGTGGTGCACGTATCAACATCTCAGAAGGG
AATTGTCCTGAGAGAATTATAACTTTGGCTGGACCGACTAATGCCATCTTCAAAGCCTTTGCTA
TGATCATTGACAAACTGGAAGAGGACATAAGCAGCTCTATGACCAATAGCACAGCTGCCAGTAG
ACCCCCGGTTACCTTACGGCTGGTGGTTCCTGCTAGTCAGTGTGGCTCTCTTATTGGAAAAGGT
GGTTGCAAGATCAAGGAAATAAGAGAGAGTACAGGGGCTCAGGTCCAGGTGGCAGGGGATATGC
TCCCCAACTCAACTGAGCGAGCAATCACTATTGCTGGCATTCCGCAGTCCATCATTGAGTGTGT
CAAACAGATCTGCGTGGTCATGTTGGAGTCCCCCCCGAAGGGCGTGACCATCCCGTACCGGCCC
AAGCCCTCCAGTTCTCCAGTCATCTTTGCAGGTGGTCAGGACAGGTACAGCACAGGCAGCGACA
GTGCGAGCTTTCCCCACACCACCCCGTCCATGTGCCTCAACCCTGACCTGGAGGGACCACCTCT
AGAGGCCTATACCATTCAAGGACAGTATGCCATTCCACAGCCAGATTTGACCAAGCTGCACCAG
TTGGCAATGCAACAGTCTCATTTTCCCATGACCCATGGCAACACCGGATTCAGTGCAGGTTTGG
ATGCATCTGCTCAAACTACTTCTCATGAACTCACCATTCCAAATGATTTGATTGGCTGCATAAT
TGGGCGTCAGGGCGCCAAAATCAATGAGATCCGTCAGATGTCTGGGGCGCAGATCAAAATTGCA
AACCCAGTGGAAGGATCTACTGATCGGCAGGTTACCATCACTGGATCTGCTGCCAGCATTAGTC
TGGCTCAGTATCTAATCAATGTCAGGCTTTCCTCGGAGACAGGTGGCATGGGGAGCAGCTAGAA
CAGAGCAGATTCATCCATAATCCCTTTCTGCTGTTCACCACCACCCATGATCCATCTGTGTAGT
TTCTGAACAGTCAGCGATTCCAGGTTTTAAATAGTTTGTAAATTTTCAGTTTCTACACACTTTA
TCATCCACTCATGATTTTTTAATTAAAGTGTTTTAATTCTTTTCTCTGTTCAGCAGTTACGCTG
AGATATCCATATTTAGTTTTATAAGCTTCTCCCCCTTTTTTGTTTTGTTTTGTTTTTTTTTTTT
GGCTCATGAATTTTTGTTTGTCATGGAAATGTAAGAGTGGATTATTAATACATTTCAGTTTAGT
TCTGTAATGTCAGGAATTTTTCAAAAAAAGAATTAAAAGATGGACTGGAGCTTTTTCTTTGTGA
ATAGAAACTGGATGCCACAGTGACTTATGCGGGTGTTATTCCTGTCTGATACTATTTTTATAGA
GCCCTGATTCCATTTAAATAGAATTAGTGGACTTCCTTTTTTACCACTCCCTTTTTTTTTTTTT
TTTTTTTTTTTTTTTTGTAATTTGCCCTCAATCTTTTCCCCCCCATGATCCTGGGTGGCCTCTG
AAGACTGACAGTCACACTTACCCTGGGATTGTACAGCAGCATTGTACAGTGCATTTATGGAGCT
GGGACAGGAAGGTGTCGATTGGAAGCTTGAGAATCACTGCCTCGTGCATACTTTAATTTTAAAG
TCTAGTAATCATTTAGTTTTCTCCACAGGTGTTGTGAGACCTTGTGTTCTTGTCCTGAAATCAT
TTAGAAAAGTTTACCTGCTGCCATTTATGTTAACTTAGAAAGTAACTTATCCAAATTCCTCAGG
TAAAATCTTAAATCCAAGACTTAATCCATGTATTACCACTCCACTCATTCACCAAGAAAACCCT
CGACAGTTGGGCCTGCATGGAGTGGTTATATTTCAGGGTTGTTCACAGGGGTTACAATATGACA
GTCCCCACCCCTACCAGGCACCAGATAACAGCGGGGACTTAACCAGCACCCAGTTCTTCAGCCT
GAGCCATCACATGCTATTAATCTTCTAACTTGCCTCTGGGCCCAAAGCCAGGGCTTTGGCAGAG
AAACAGGAACAAAGAAATGAGTTACATTGCCACCTGAGAAACCTCAGAGGGAGGACCTAGGACC
CAGCCTTAGTTTCCCTCCTCCCAAGTGCAAAATGTGTAAACAGTAAACGGAAAATAAAAGTGCA
GTTTTAAGTGAATCCTCTTCCTGCCCCCCATGTTTAGGGACAGACAGTGTAGAGACAAGCCTGG
CTTTTCTATGCCTACTTGCTTGTTCAACATAAGGAATGGGGTGAAGCAAGAAGGGACCGGTGTC
CTTTCCTTACAGCTCTAGGGTAGTACTTGGAGTCATTTCCACAGCTGCCAGTGTCCCTAGAACT
TAATTGGTCAGGGGCGTCGTTCACTCTGAAGCCTGACTTACGGCTAAGAAAGCCCCGTCTATCT
GTTGATTATGTGGCGCATATATATTATTTATATAAATATTTCTCTATGTACAAGGAATAAGAGT
GTCTTTCATGGAGGAAGGGAGGCTGGGGGCCGCAAGGCATCAATGCTGTTGGAGTTGTCCAATT
CAGTGCTGTCACAGTCTGAGTCCTCAGGATTGGGGCCCTGTGAAGAGTAGAAATGCAGTGAAGT
GGGGGAGCTCAGCATCTTTTAGCATTACAGATTCTTTGAGGGCCCTCAGTGGGGTGCTTTTACA
TTATCAGTGGAGGTGAGGTTTTTTTCTTTTTTTAAAATCTCACTGTTGATAGGTCATGCTCCAA
GGCACTAGGCAGACTCCTTTTAGGATACTCTGACTGCAGTGTATTGCTGTCATACAAGTTAAAC
CTCTGGCACTATATACTTGGATATTTGTTTTAATGGTTCTGGAAAAAATTGGTGGCTTGAAGGC
TAAATAAATACCTTTTGTAGGTTAGTCA

hide sequence

RefSeq Acc Id:

XM_006242425 ⟹ XP_006242487

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	135,483,839 - 135,508,254 (+)	NCBI
mRatBN7.2	7	133,605,484 - 133,631,312 (+)	NCBI
Rnor_6.0	7	144,077,901 - 144,103,723 (+)	NCBI
Rnor_5.0	7	141,870,034 - 141,895,861 (+)	NCBI

Sequence:

show sequence

TCTCTTTCCCCCTTCCTCCTCCTCCACCCCCCCTCCTCCGCCCGCTAGCGGGGCCCCCCTCGCC
TTCCCGCCCGCCCCTATTGTTCCGCCCCCGGCCTCCCGCCCTTCCCCTTCCCGCCCGCTCCCCT
TTTCCCCTCAGTCGACTCGCGCCTCCAGTTTTTGGCTTTCACTCTCACCAGTGACCAAAGACTT
GACCACTCAAAGTCCAGCTCCCTGTAACTGCTAGACATGGACACCGGTGTGATTGAAGGTGGAT
TAAATGTCACTCTCACCATCAGGCTACTTATGCACGGAAAGGAAGTTGGCAGTATCATCGGAAA
GAAAGGAGAATCTGTTAAGAAGATGCGCGAGGAGAGTGGTGCACGTATCAACATCTCAGAAGGG
AATTGTCCTGAGAGAATTATAACTTTGGCTGGACCGACTAATGCCATCTTCAAAGCCTTTGCTA
TGATCATTGACAAACTGGAAGAGGACATAAGCAGCTCTATGACCAATAGCACAGCTGCCAGTAG
ACCCCCGGTTACCTTACGGCTGGTGGTTCCTGCTAGTCAGTGTGGCTCTCTTATTGGAAAAGGT
GGTTGCAAGATCAAGGAAATAAGAGAGAGTACAGGGGCTCAGGTCCAGGTGGCAGGGGATATGC
TCCCCAACTCAACTGAGCGAGCAATCACTATTGCTGGCATTCCGCAGTCCATCATTGAGTGTGT
CAAACAGATCTGCGTGGTCATGTTGGAGTCCCCCCCGAAGGGCGTGACCATCCCGTACCGGCCC
AAGCCCTCCAGTTCTCCAGTCATCTTTGCAGGTGGTCAGGCCTATACCATTCAAGGACAGTATG
CCATTCCACAGCCAGATTTGACCAAGCTGCACCAGTTGGCAATGCAACAGTCTCATTTTCCCAT
GACCCATGGCAACACCGGATTCAGTGGCATTGAATCCAGCTCTCCAGAGGTGAAAGGCTATTGG
GCAGGTTTGGATGCATCTGCTCAAACTACTTCTCATGAACTCACCATTCCAAATGATTTGATTG
GCTGCATAATTGGGCGTCAGGGCGCCAAAATCAATGAGATCCGTCAGATGTCTGGGGCGCAGAT
CAAAATTGCAAACCCAGTGGAAGGATCTACTGATCGGCAGGTTACCATCACTGGATCTGCTGCC
AGCATTAGTCTGGCTCAGTATCTAATCAATGTCAGGCTTTCCTCGGAGACAGGTGGCATGGGGA
GCAGCTAGAACAGAGCAGATTCATCCATAATCCCTTTCTGCTGTTCACCACCACCCATGATCCA
TCTGTGTAGTTTCTGAACAGTCAGCGATTCCAGGTTTTAAATAGTTTGTAAATTTTCAGTTTCT
ACACACTTTATCATCCACTCATGATTTTTTAATTAAAGTGTTTTAATTCTTTTCTCTGTTCAGC
AGTTACGCTGAGATATCCATATTTAGTTTTATAAGCTTCTCCCCCTTTTTTGTTTTGTTTTGTT
TTTTTTTTTTGGCTCATGAATTTTTGTTTGTCATGGAAATGTAAGAGTGGATTATTAATACATT
TCAGTTTAGTTCTGTAATGTCAGGAATTTTTCAAAAAAAGAATTAAAAGATGGACTGGAGCTTT
TTCTTTGTGAATAGAAACTGGATGCCACAGTGACTTATGCGGGTGTTATTCCTGTCTGATACTA
TTTTTATAGAGCCCTGATTCCATTTAAATAGAATTAGTGGACTTCCTTTTTTACCACTCCCTTT
TTTTTTTTTTTTTTTTTTTTTTTTTTGTAATTTGCCCTCAATCTTTTCCCCCCCATGATCCTGG
GTGGCCTCTGAAGACTGACAGTCACACTTACCCTGGGATTGTACAGCAGCATTGTACAGTGCAT
TTATGGAGCTGGGACAGGAAGGTGTCGATTGGAAGCTTGAGAATCACTGCCTCGTGCATACTTT
AATTTTAAAGTCTAGTAATCATTTAGTTTTCTCCACAGGTGTTGTGAGACCTTGTGTTCTTGTC
CTGAAATCATTTAGAAAAGTTTACCTGCTGCCATTTATGTTAACTTAGAAAGTAACTTATCCAA
ATTCCTCAGGTAAAATCTTAAATCCAAGACTTAATCCATGTATTACCACTCCACTCATTCACCA
AGAAAACCCTCGACAGTTGGGCCTGCATGGAGTGGTTATATTTCAGGGTTGTTCACAGGGGTTA
CAATATGACAGTCCCCACCCCTACCAGGCACCAGATAACAGCGGGGACTTAACCAGCACCCAGT
TCTTCAGCCTGAGCCATCACATGCTATTAATCTTCTAACTTGCCTCTGGGCCCAAAGCCAGGGC
TTTGGCAGAGAAACAGGAACAAAGAAATGAGTTACATTGCCACCTGAGAAACCTCAGAGGGAGG
ACCTAGGACCCAGCCTTAGTTTCCCTCCTCCCAAGTGCAAAATGTGTAAACAGTAAACGGAAAA
TAAAAGTGCAGTTTTAAGTGAATCCTCTTCCTGCCCCCCATGTTTAGGGACAGACAGTGTAGAG
ACAAGCCTGGCTTTTCTATGCCTACTTGCTTGTTCAACATAAGGAATGGGGTGAAGCAAGAAGG
GACCGGTGTCCTTTCCTTACAGCTCTAGGGTAGTACTTGGAGTCATTTCCACAGCTGCCAGTGT
CCCTAGAACTTAATTGGTCAGGGGCGTCGTTCACTCTGAAGCCTGACTTACGGCTAAGAAAGCC
CCGTCTATCTGTTGATTATGTGGCGCATATATATTATTTATATAAATATTTCTCTATGTACAAG
GAATAAGAGTGTCTTTCATGGAGGAAGGGAGGCTGGGGGCCGCAAGGCATCAATGCTGTTGGAG
TTGTCCAATTCAGTGCTGTCACAGTCTGAGTCCTCAGGATTGGGGCCCTGTGAAGAGTAGAAAT
GCAGTGAAGTGGGGGAGCTCAGCATCTTTTAGCATTACAGATTCTTTGAGGGCCCTCAGTGGGG
TGCTTTTACATTATCAGTGGAGGTGAGGTTTTTTTCTTTTTTTAAAATCTCACTGTTGATAGGT
CATGCTCCAAGGCACTAGGCAGACTCCTTTTAGGATACTCTGACTGCAGTGTATTGCTGTCATA
CAAGTTAAACCTCTGGCACTATATACTTGGATATTTGTTTTAATGGTTCTGGAAAAAATTGGTG
GCTTGAAGGCTAAATAAATACCTTTTGTAGGTTAGTCA

hide sequence

RefSeq Acc Id:

XM_006242427 ⟹ XP_006242489

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	135,483,848 - 135,508,254 (+)	NCBI
mRatBN7.2	7	133,605,484 - 133,631,312 (+)	NCBI
Rnor_6.0	7	144,077,901 - 144,103,723 (+)	NCBI
Rnor_5.0	7	141,870,034 - 141,895,861 (+)	NCBI

Sequence:

show sequence

TCTCTTTCCCCCTTCCTCCTCCTCCACCCCCCCTCCTCCGCCCGCTAGCGGGGCCCCCCTCGCC
TTCCCGCCCGCCCCTATTGTTCCGCCCCCGGCCTCCCGCCCTTCCCCTTCCCGCCCGCTCCCCT
TTTCCCCTCAGTCGACTCGCGCCTCCAGTTTTTGGCTTTCACTCTCACCAGTGACCAAAGACTT
GACCACTCAAAGTCCAGCTCCCTGTAACTGCTAGACATGGACACCGGTGTGATTGAAGGTGGAT
TAAATGTCACTCTCACCATCAGGCTACTTATGCACGGAAAGGAAGTTGGCAGTATCATCGGAAA
GAAAGGAGAATCTGTTAAGAAGATGCGCGAGGAGAGTGGTGCACGTATCAACATCTCAGAAGGG
AATTGTCCTGAGAGAATTATAACTTTGGCTGGACCGACTAATGCCATCTTCAAAGCCTTTGCTA
TGATCATTGACAAACTGGAAGAGGACATAAGCAGCTCTATGACCAATAGCACAGCTGCCAGTAG
ACCCCCGGTTACCTTACGGCTGGTGGTTCCTGCTAGTCAGTGTGGCTCTCTTATTGGAAAAGGT
GGTTGCAAGATCAAGGAAATAAGAGAGAGTACAGGGGCTCAGGTCCAGGTGGCAGGGGATATGC
TCCCCAACTCAACTGAGCGAGCAATCACTATTGCTGGCATTCCGCAGTCCATCATTGAGTGTGT
CAAACAGATCTGCGTGGTCATGTTGGAGTCCCCCCCGAAGGGCGTGACCATCCCGTACCGGCCC
AAGCCCTCCAGTTCTCCAGTCATCTTTGCAGGTGGTCAGGCCTATACCATTCAAGGACAGTATG
CCATTCCACAGCCAGATTTGACCAAGCTGCACCAGTTGGCAATGCAACAGTCTCATTTTCCCAT
GACCCATGGCAACACCGGATTCAGTGCAGGTTTGGATGCATCTGCTCAAACTACTTCTCATGAA
CTCACCATTCCAAATGATTTGATTGGCTGCATAATTGGGCGTCAGGGCGCCAAAATCAATGAGA
TCCGTCAGATGTCTGGGGCGCAGATCAAAATTGCAAACCCAGTGGAAGGATCTACTGATCGGCA
GGTTACCATCACTGGATCTGCTGCCAGCATTAGTCTGGCTCAGTATCTAATCAATGTCAGGCTT
TCCTCGGAGACAGGTGGCATGGGGAGCAGCTAGAACAGAGCAGATTCATCCATAATCCCTTTCT
GCTGTTCACCACCACCCATGATCCATCTGTGTAGTTTCTGAACAGTCAGCGATTCCAGGTTTTA
AATAGTTTGTAAATTTTCAGTTTCTACACACTTTATCATCCACTCATGATTTTTTAATTAAAGT
GTTTTAATTCTTTTCTCTGTTCAGCAGTTACGCTGAGATATCCATATTTAGTTTTATAAGCTTC
TCCCCCTTTTTTGTTTTGTTTTGTTTTTTTTTTTTGGCTCATGAATTTTTGTTTGTCATGGAAA
TGTAAGAGTGGATTATTAATACATTTCAGTTTAGTTCTGTAATGTCAGGAATTTTTCAAAAAAA
GAATTAAAAGATGGACTGGAGCTTTTTCTTTGTGAATAGAAACTGGATGCCACAGTGACTTATG
CGGGTGTTATTCCTGTCTGATACTATTTTTATAGAGCCCTGATTCCATTTAAATAGAATTAGTG
GACTTCCTTTTTTACCACTCCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTAATTTGCCCTC
AATCTTTTCCCCCCCATGATCCTGGGTGGCCTCTGAAGACTGACAGTCACACTTACCCTGGGAT
TGTACAGCAGCATTGTACAGTGCATTTATGGAGCTGGGACAGGAAGGTGTCGATTGGAAGCTTG
AGAATCACTGCCTCGTGCATACTTTAATTTTAAAGTCTAGTAATCATTTAGTTTTCTCCACAGG
TGTTGTGAGACCTTGTGTTCTTGTCCTGAAATCATTTAGAAAAGTTTACCTGCTGCCATTTATG
TTAACTTAGAAAGTAACTTATCCAAATTCCTCAGGTAAAATCTTAAATCCAAGACTTAATCCAT
GTATTACCACTCCACTCATTCACCAAGAAAACCCTCGACAGTTGGGCCTGCATGGAGTGGTTAT
ATTTCAGGGTTGTTCACAGGGGTTACAATATGACAGTCCCCACCCCTACCAGGCACCAGATAAC
AGCGGGGACTTAACCAGCACCCAGTTCTTCAGCCTGAGCCATCACATGCTATTAATCTTCTAAC
TTGCCTCTGGGCCCAAAGCCAGGGCTTTGGCAGAGAAACAGGAACAAAGAAATGAGTTACATTG
CCACCTGAGAAACCTCAGAGGGAGGACCTAGGACCCAGCCTTAGTTTCCCTCCTCCCAAGTGCA
AAATGTGTAAACAGTAAACGGAAAATAAAAGTGCAGTTTTAAGTGAATCCTCTTCCTGCCCCCC
ATGTTTAGGGACAGACAGTGTAGAGACAAGCCTGGCTTTTCTATGCCTACTTGCTTGTTCAACA
TAAGGAATGGGGTGAAGCAAGAAGGGACCGGTGTCCTTTCCTTACAGCTCTAGGGTAGTACTTG
GAGTCATTTCCACAGCTGCCAGTGTCCCTAGAACTTAATTGGTCAGGGGCGTCGTTCACTCTGA
AGCCTGACTTACGGCTAAGAAAGCCCCGTCTATCTGTTGATTATGTGGCGCATATATATTATTT
ATATAAATATTTCTCTATGTACAAGGAATAAGAGTGTCTTTCATGGAGGAAGGGAGGCTGGGGG
CCGCAAGGCATCAATGCTGTTGGAGTTGTCCAATTCAGTGCTGTCACAGTCTGAGTCCTCAGGA
TTGGGGCCCTGTGAAGAGTAGAAATGCAGTGAAGTGGGGGAGCTCAGCATCTTTTAGCATTACA
GATTCTTTGAGGGCCCTCAGTGGGGTGCTTTTACATTATCAGTGGAGGTGAGGTTTTTTTCTTT
TTTTAAAATCTCACTGTTGATAGGTCATGCTCCAAGGCACTAGGCAGACTCCTTTTAGGATACT
CTGACTGCAGTGTATTGCTGTCATACAAGTTAAACCTCTGGCACTATATACTTGGATATTTGTT
TTAATGGTTCTGGAAAAAATTGGTGGCTTGAAGGCTAAATAAATACCTTTTGTAGGTTAGTCA

hide sequence

RefSeq Acc Id:

XM_017595006 ⟹ XP_017450495

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	135,483,716 - 135,504,879 (+)	NCBI
mRatBN7.2	7	133,605,483 - 133,626,358 (+)	NCBI
Rnor_6.0	7	144,077,901 - 144,098,769 (+)	NCBI

Sequence:

show sequence

TCTCTTTCCCCCTTCCTCCTCCTCCACCCCCCCTCCTCCGCCCGCTAGCGGGGCCCCCCTCGCC
TTCCCGCCCGCCCCTATTGTTCCGCCCCCGGCCTCCCGCCCTTCCCCTTCCCGCCCGCTCCCCT
TTTCCCCTCAGTCGACTCGCGCCTCCAGTTTTTGGCTTTCACTCTCACCAGTGACCAAAGACTT
GACCACTCAAAGTCCAGCTCCCTGTAACTGCTAGACATGGACACCGGTGTGATTGAAGGTGGAT
TAAATGTCACTCTCACCATCAGGCTACTTATGCACGGAAAGGAAGTTGGCAGTATCATCGGAAA
GAAAGGAGAATCTGTTAAGAAGATGCGCGAGGAGAGTGGTGCACGTATCAACATCTCAGAAGGG
AATTGTCCTGAGAGAATTATAACTTTGGCTGGACCGACTAATGCCATCTTCAAAGCCTTTGCTA
TGATCATTGACAAACTGGAAGAGGACATAAGCAGCTCTATGACCAATAGCACAGCTGCCAGTAG
ACCCCCGGTTACCTTACGGCTGGTGGTTCCTGCTAGTCAGTGTGGCTCTCTTATTGGAAAAGGT
GGTTGCAAGATCAAGGAAATAAGAGAGAGTACAGGGGCTCAGGTCCAGGTGGCAGGGGATATGC
TCCCCAACTCAACTGAGCGAGCAATCACTATTGCTGGCATTCCGCAGTCCATCATTGAGTGTGT
CAAACAGATCTGCGTGGTCATGTTGGAGTCCCCCCCGAAGGGCGTGACCATCCCGTACCGGCCC
AAGCCCTCCAGTTCTCCAGTCATCTTTGCAGGTGGTCAGGACAGGTACAGCACAGGCAGCGACA
GTGCGAGCTTTCCCCACACCACCCCGTCCATGTGCCTCAACCCTGACCTGGAGGGACCACCTCT
AGAGGCCTATACCATTCAAGGACAGTATGCCATTCCACAGCCAGATTTGACCAAGCTGCACCAG
TTGGCAATGCAACAGTCTCATTTTCCCATGACCCATGGCAACACCGGATTCAGTGGCATTGAAT
CCAGCTCTCCAGAGGTGAAAGGCTATTGGGCAGGTTTGGATGCATCTGCTCAAACTACTTCTCA
TGAACTCACCATTCCAAATGATTTGATTGGCTGCATAATTGGGCGTCAGGGCGCCAAAATCAAT
GAGATCCGTCAGATGTCTGGGGCGCAGATCAAAATTGCAAACCCAGTGGAAGGATCTACTGATC
GGCAGGTTACCATCACTGGATCTGCTGCCAGCATTAGTCTGGCTCAGTATCTAATCAATGTCAG
TTTAGAAAACGCTAAACCCTCCTCCCAGGCAGCCTCCGTCACGATCCCTGATCACCTCAGCATC
AACCTCTCTCAACCCTCCACCCCTTCTTCTTCTTCTTCCTCCTCCACCACCACCCCCTCGCTCG
CCACAGCGGGGACTTCCGACGCACCCTCCAGCCTCCCCAACCCTCTTCCGACCGCCCCTTGTGT
CTCCAGTCTGCTTGGCATGAAACCCATCCCTCTCCTGGCTCTAAATGTTGTGTCTGCTGCTAAG
GGTACCGGGGCTTCAGCCACCACCACCACCACCTCTACTGTGCCATGTGTAACTAACAAACTGA
AAGGCGAGAAGCAGAGATTCTCTCCCTACTGAGTGCTTATCTTGGCATTGCCTCAAGTGTTGGT
TTATTTTGTTTTTCTTTGTTAATATTGGTGAGAACCAAACTATTGTGAGCTTGTGACCATTTTC
TTTTTACTACTTTGGGGGATAACTGGGTGGGGTGGGCACAGGGGTGACACTTGTTAGGTTTAGG
TCTTCACAGCTCAGTGCCTGCTTCAGAGTCTGACTTGTTGATGGAACTCTTTATCTAGAGCCAC
AGTTCTTACTCTAATTCTGTTACACTTTTTTGTAGCTTTATTCTGCCTTGCAATATAAACAATG
TGTTAGGCTCTGTGTTGATGAATAAAAGCTTCTCCCTTAATCCTTCCTTTTTTTACTTTAAATC
ATTTAATGGTTAAAGCTGTCAGCTGGCCTTCTTGGTCAAATCTGTGTTTCTAGTTATAATAAAG
TTGCCACAGTAAGAA

hide sequence

RefSeq Acc Id:

XM_017595007 ⟹ XP_017450496

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	135,483,904 - 135,504,879 (+)	NCBI
mRatBN7.2	7	133,605,481 - 133,626,358 (+)	NCBI
Rnor_6.0	7	144,077,949 - 144,098,769 (+)	NCBI

Sequence:

show sequence

CGGGGCCCCCCTCGCCTTCCCGCCCGCCCCTATTGTTCCGCCCCCGGCCTCCCGCCCTTCCCCT
TCCCGCCCGCTCCCCTTTTCCCCTCAGTCGACTCGCGCCTCCAGTGACCAAAGACTTGACCACT
CAAAGTCCAGCTCCCTGTAACTGCTAGACATGGACACCGGTGTGATTGAAGGTGGATTAAATGT
CACTCTCACCATCAGGCTACTTATGCACGGAAAGGAAGTTGGCAGTATCATCGGAAAGAAAGGA
GAATCTGTTAAGAAGATGCGCGAGGAGAGTGGTGCACGTATCAACATCTCAGAAGGGAATTGTC
CTGAGAGAATTATAACTTTGGCTGGACCGACTAATGCCATCTTCAAAGCCTTTGCTATGATCAT
TGACAAACTGGAAGAGGACATAAGCAGCTCTATGACCAATAGCACAGCTGCCAGTAGACCCCCG
GTTACCTTACGGCTGGTGGTTCCTGCTAGTCAGTGTGGCTCTCTTATTGGAAAAGGTGGTTGCA
AGATCAAGGAAATAAGAGAGAGTACAGGGGCTCAGGTCCAGGTGGCAGGGGATATGCTCCCCAA
CTCAACTGAGCGAGCAATCACTATTGCTGGCATTCCGCAGTCCATCATTGAGTGTGTCAAACAG
ATCTGCGTGGTCATGTTGGAGTCCCCCCCGAAGGGCGTGACCATCCCGTACCGGCCCAAGCCCT
CCAGTTCTCCAGTCATCTTTGCAGGTGGTCAGGACAGGTACAGCACAGGCAGCGACAGTGCGAG
CTTTCCCCACACCACCCCGTCCATGTGCCTCAACCCTGACCTGGAGGGACCACCTCTAGAGGCC
TATACCATTCAAGGACAGTATGCCATTCCACAGCCAGATTTGACCAAGCTGCACCAGTTGGCAA
TGCAACAGTCTCATTTTCCCATGACCCATGGCAACACCGGATTCAGTGGCATTGAATCCAGCTC
TCCAGAGGTGAAAGGCTATTGGGCAGGTTTGGATGCATCTGCTCAAACTACTTCTCATGAACTC
ACCATTCCAAATGATTTGATTGGCTGCATAATTGGGCGTCAGGGCGCCAAAATCAATGAGATCC
GTCAGATGTCTGGGGCGCAGATCAAAATTGCAAACCCAGTGGAAGGATCTACTGATCGGCAGGT
TACCATCACTGGATCTGCTGCCAGCATTAGTCTGGCTCAGTATCTAATCAATGTCAGTTTAGAA
AACGCTAAACCCTCCTCCCAGGCAGCCTCCGTCACGATCCCTGATCACCTCAGCATCAACCTCT
CTCAACCCTCCACCCCTTCTTCTTCTTCTTCCTCCTCCACCACCACCCCCTCGCTCGCCACAGC
GGGGACTTCCGACGCACCCTCCAGCCTCCCCAACCCTCTTCCGACCGCCCCTTGTGTCTCCAGT
CTGCTTGGCATGAAACCCATCCCTCTCCTGGCTCTAAATGTTGTGTCTGCTGCTAAGGGTACCG
GGGCTTCAGCCACCACCACCACCACCTCTACTGTGCCATGTGTAACTAACAAACTGAAAGGCGA
GAAGCAGAGATTCTCTCCCTACTGAGTGCTTATCTTGGCATTGCCTCAAGTGTTGGTTTATTTT
GTTTTTCTTTGTTAATATTGGTGAGAACCAAACTATTGTGAGCTTGTGACCATTTTCTTTTTAC
TACTTTGGGGGATAACTGGGTGGGGTGGGCACAGGGGTGACACTTGTTAGGTTTAGGTCTTCAC
AGCTCAGTGCCTGCTTCAGAGTCTGACTTGTTGATGGAACTCTTTATCTAGAGCCACAGTTCTT
ACTCTAATTCTGTTACACTTTTTTGTAGCTTTATTCTGCCTTGCAATATAAACAATGTGTTAGG
CTCTGTGTTGATGAATAAAAGCTTCTCCCTTAATCCTTCCTTTTTTTACTTTAAATCATTTAAT
GGTTAAAGCTGTCAGCTGGCCTTCTTGGTCAAATCTGTGTTTCTAGTTATAATAAAGTTGCCAC
AGTAAGAA

hide sequence

RefSeq Acc Id:

XM_017595010 ⟹ XP_017450499

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	135,483,711 - 135,504,879 (+)	NCBI
mRatBN7.2	7	133,605,483 - 133,626,358 (+)	NCBI
Rnor_6.0	7	144,077,901 - 144,098,769 (+)	NCBI

Sequence:

show sequence

TCTCTTTCCCCCTTCCTCCTCCTCCACCCCCCCTCCTCCGCCCGCTAGCGGGGCCCCCCTCGCC
TTCCCGCCCGCCCCTATTGTTCCGCCCCCGGCCTCCCGCCCTTCCCCTTCCCGCCCGCTCCCCT
TTTCCCCTCAGTCGACTCGCGCCTCCAGTTTTTGGCTTTCACTCTCACCAGTGACCAAAGACTT
GACCACTCAAAGTCCAGCTCCCTGTAACTGCTAGACATGGACACCGGTGTGATTGAAGGTGGAT
TAAATGTCACTCTCACCATCAGGCTACTTATGCACGGAAAGGAAGTTGGCAGTATCATCGGAAA
GAAAGGAGAATCTGTTAAGAAGATGCGCGAGGAGAGTGGTGCACGTATCAACATCTCAGAAGGG
AATTGTCCTGAGAGAATTATAACTTTGGCTGGACCGACTAATGCCATCTTCAAAGCCTTTGCTA
TGATCATTGACAAACTGGAAGAGGACATAAGCAGCTCTATGACCAATAGCACAGCTGCCAGTAG
ACCCCCGGTTACCTTACGGCTGGTGGTTCCTGCTAGTCAGTGTGGCTCTCTTATTGGAAAAGGT
GGTTGCAAGATCAAGGAAATAAGAGAGAGTACAGGGGCTCAGGTCCAGGTGGCAGGGGATATGC
TCCCCAACTCAACTGAGCGAGCAATCACTATTGCTGGCATTCCGCAGTCCATCATTGAGTGTGT
CAAACAGATCTGCGTGGTCATGTTGGAGTCCCCCCCGAAGGGCGTGACCATCCCGTACCGGCCC
AAGCCCTCCAGTTCTCCAGTCATCTTTGCAGGTGGTCAGGCCTATACCATTCAAGGACAGTATG
CCATTCCACAGCCAGATTTGACCAAGCTGCACCAGTTGGCAATGCAACAGTCTCATTTTCCCAT
GACCCATGGCAACACCGGATTCAGTGGCATTGAATCCAGCTCTCCAGAGGTGAAAGGCTATTGG
GCAGGTTTGGATGCATCTGCTCAAACTACTTCTCATGAACTCACCATTCCAAATGATTTGATTG
GCTGCATAATTGGGCGTCAGGGCGCCAAAATCAATGAGATCCGTCAGATGTCTGGGGCGCAGAT
CAAAATTGCAAACCCAGTGGAAGGATCTACTGATCGGCAGGTTACCATCACTGGATCTGCTGCC
AGCATTAGTCTGGCTCAGTATCTAATCAATGTCAGTTTAGAAAACGCTAAACCCTCCTCCCAGG
CAGCCTCCGTCACGATCCCTGATCACCTCAGCATCAACCTCTCTCAACCCTCCACCCCTTCTTC
TTCTTCTTCCTCCTCCACCACCACCCCCTCGCTCGCCACAGCGGGGACTTCCGACGCACCCTCC
AGCCTCCCCAACCCTCTTCCGACCGCCCCTTGTGTCTCCAGTCTGCTTGGCATGAAACCCATCC
CTCTCCTGGCTCTAAATGTTGTGTCTGCTGCTAAGGGTACCGGGGCTTCAGCCACCACCACCAC
CACCTCTACTGTGCCATGTGTAACTAACAAACTGAAAGGCGAGAAGCAGAGATTCTCTCCCTAC
TGAGTGCTTATCTTGGCATTGCCTCAAGTGTTGGTTTATTTTGTTTTTCTTTGTTAATATTGGT
GAGAACCAAACTATTGTGAGCTTGTGACCATTTTCTTTTTACTACTTTGGGGGATAACTGGGTG
GGGTGGGCACAGGGGTGACACTTGTTAGGTTTAGGTCTTCACAGCTCAGTGCCTGCTTCAGAGT
CTGACTTGTTGATGGAACTCTTTATCTAGAGCCACAGTTCTTACTCTAATTCTGTTACACTTTT
TTGTAGCTTTATTCTGCCTTGCAATATAAACAATGTGTTAGGCTCTGTGTTGATGAATAAAAGC
TTCTCCCTTAATCCTTCCTTTTTTTACTTTAAATCATTTAATGGTTAAAGCTGTCAGCTGGCCT
TCTTGGTCAAATCTGTGTTTCTAGTTATAATAAAGTTGCCACAGTAAGAA

hide sequence

RefSeq Acc Id:

XM_017595011 ⟹ XP_017450500

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	135,483,710 - 135,504,879 (+)	NCBI
mRatBN7.2	7	133,605,481 - 133,626,358 (+)	NCBI
Rnor_6.0	7	144,077,949 - 144,098,769 (+)	NCBI

Sequence:

show sequence

CGGGGCCCCCCTCGCCTTCCCGCCCGCCCCTATTGTTCCGCCCCCGGCCTCCCGCCCTTCCCCT
TCCCGCCCGCTCCCCTTTTCCCCTCAGTCGACTCGCGCCTCCAGTGACCAAAGACTTGACCACT
CAAAGTCCAGCTCCCTGTAACTGCTAGACATGGACACCGGTGTGATTGAAGGTGGATTAAATGT
CACTCTCACCATCAGGCTACTTATGCACGGAAAGGAAGTTGGCAGTATCATCGGAAAGAAAGGA
GAATCTGTTAAGAAGATGCGCGAGGAGAGTGGTGCACGTATCAACATCTCAGAAGGGAATTGTC
CTGAGAGAATTATAACTTTGGCTGGACCGACTAATGCCATCTTCAAAGCCTTTGCTATGATCAT
TGACAAACTGGAAGAGGACATAAGCAGCTCTATGACCAATAGCACAGCTGCCAGTAGACCCCCG
GTTACCTTACGGCTGGTGGTTCCTGCTAGTCAGTGTGGCTCTCTTATTGGAAAAGGTGGTTGCA
AGATCAAGGAAATAAGAGAGAGTACAGGGGCTCAGGTCCAGGTGGCAGGGGATATGCTCCCCAA
CTCAACTGAGCGAGCAATCACTATTGCTGGCATTCCGCAGTCCATCATTGAGTGTGTCAAACAG
ATCTGCGTGGTCATGTTGGAGTCCCCCCCGAAGGGCGTGACCATCCCGTACCGGCCCAAGCCCT
CCAGTTCTCCAGTCATCTTTGCAGGTGGTCAGGCCTATACCATTCAAGGACAGTATGCCATTCC
ACAGCCAGATTTGACCAAGCTGCACCAGTTGGCAATGCAACAGTCTCATTTTCCCATGACCCAT
GGCAACACCGGATTCAGTGGCATTGAATCCAGCTCTCCAGAGGTGAAAGGCTATTGGGCAGGTT
TGGATGCATCTGCTCAAACTACTTCTCATGAACTCACCATTCCAAATGATTTGATTGGCTGCAT
AATTGGGCGTCAGGGCGCCAAAATCAATGAGATCCGTCAGATGTCTGGGGCGCAGATCAAAATT
GCAAACCCAGTGGAAGGATCTACTGATCGGCAGGTTACCATCACTGGATCTGCTGCCAGCATTA
GTCTGGCTCAGTATCTAATCAATGTCAGTTTAGAAAACGCTAAACCCTCCTCCCAGGCAGCCTC
CGTCACGATCCCTGATCACCTCAGCATCAACCTCTCTCAACCCTCCACCCCTTCTTCTTCTTCT
TCCTCCTCCACCACCACCCCCTCGCTCGCCACAGCGGGGACTTCCGACGCACCCTCCAGCCTCC
CCAACCCTCTTCCGACCGCCCCTTGTGTCTCCAGTCTGCTTGGCATGAAACCCATCCCTCTCCT
GGCTCTAAATGTTGTGTCTGCTGCTAAGGGTACCGGGGCTTCAGCCACCACCACCACCACCTCT
ACTGTGCCATGTGTAACTAACAAACTGAAAGGCGAGAAGCAGAGATTCTCTCCCTACTGAGTGC
TTATCTTGGCATTGCCTCAAGTGTTGGTTTATTTTGTTTTTCTTTGTTAATATTGGTGAGAACC
AAACTATTGTGAGCTTGTGACCATTTTCTTTTTACTACTTTGGGGGATAACTGGGTGGGGTGGG
CACAGGGGTGACACTTGTTAGGTTTAGGTCTTCACAGCTCAGTGCCTGCTTCAGAGTCTGACTT
GTTGATGGAACTCTTTATCTAGAGCCACAGTTCTTACTCTAATTCTGTTACACTTTTTTGTAGC
TTTATTCTGCCTTGCAATATAAACAATGTGTTAGGCTCTGTGTTGATGAATAAAAGCTTCTCCC
TTAATCCTTCCTTTTTTTACTTTAAATCATTTAATGGTTAAAGCTGTCAGCTGGCCTTCTTGGT
CAAATCTGTGTTTCTAGTTATAATAAAGTTGCCACAGTAAGAA

hide sequence

RefSeq Acc Id:

XM_017595014 ⟹ XP_017450503

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	135,483,900 - 135,504,879 (+)	NCBI
mRatBN7.2	7	133,605,483 - 133,626,358 (+)	NCBI
Rnor_6.0	7	144,077,901 - 144,098,769 (+)	NCBI

Sequence:

show sequence

TCTCTTTCCCCCTTCCTCCTCCTCCACCCCCCCTCCTCCGCCCGCTAGCGGGGCCCCCCTCGCC
TTCCCGCCCGCCCCTATTGTTCCGCCCCCGGCCTCCCGCCCTTCCCCTTCCCGCCCGCTCCCCT
TTTCCCCTCAGTCGACTCGCGCCTCCAGTTTTTGGCTTTCACTCTCACCAGTGACCAAAGACTT
GACCACTCAAAGTCCAGCTCCCTGTAACTGCTAGACATGGACACCGGTGTGATTGAAGGTGGAT
TAAATGTCACTCTCACCATCAGGCTACTTATGCACGGAAAGGAAGTTGGCAGTATCATCGGAAA
GAAAGGAGAATCTGTTAAGAAGATGCGCGAGGAGAGTGGTGCACGTATCAACATCTCAGAAGGG
AATTGTCCTGAGAGAATTATAACTTTGGCTGGACCGACTAATGCCATCTTCAAAGCCTTTGCTA
TGATCATTGACAAACTGGAAGAGGACATAAGCAGCTCTATGACCAATAGCACAGCTGCCAGTAG
ACCCCCGGTTACCTTACGGCTGGTGGTTCCTGCTAGTCAGTGTGGCTCTCTTATTGGAAAAGGT
GGTTGCAAGATCAAGGAAATAAGAGAGAGTACAGGGGCTCAGGTCCAGGTGGCAGGGGATATGC
TCCCCAACTCAACTGAGCGAGCAATCACTATTGCTGGCATTCCGCAGTCCATCATTGAGTGTGT
CAAACAGATCTGCGTGGTCATGTTGGAGTCCCCCCCGAAGGGCGTGACCATCCCGTACCGGCCC
AAGCCCTCCAGTTCTCCAGTCATCTTTGCAGGTGGTCAGTTGACCAAGCTGCACCAGTTGGCAA
TGCAACAGTCTCATTTTCCCATGACCCATGGCAACACCGGATTCAGTGGCATTGAATCCAGCTC
TCCAGAGGTGAAAGGCTATTGGGCAGGTTTGGATGCATCTGCTCAAACTACTTCTCATGAACTC
ACCATTCCAAATGATTTGATTGGCTGCATAATTGGGCGTCAGGGCGCCAAAATCAATGAGATCC
GTCAGATGTCTGGGGCGCAGATCAAAATTGCAAACCCAGTGGAAGGATCTACTGATCGGCAGGT
TACCATCACTGGATCTGCTGCCAGCATTAGTCTGGCTCAGTATCTAATCAATGTCAGTTTAGAA
AACGCTAAACCCTCCTCCCAGGCAGCCTCCGTCACGATCCCTGATCACCTCAGCATCAACCTCT
CTCAACCCTCCACCCCTTCTTCTTCTTCTTCCTCCTCCACCACCACCCCCTCGCTCGCCACAGC
GGGGACTTCCGACGCACCCTCCAGCCTCCCCAACCCTCTTCCGACCGCCCCTTGTGTCTCCAGT
CTGCTTGGCATGAAACCCATCCCTCTCCTGGCTCTAAATGTTGTGTCTGCTGCTAAGGGTACCG
GGGCTTCAGCCACCACCACCACCACCTCTACTGTGCCATGTGTAACTAACAAACTGAAAGGCGA
GAAGCAGAGATTCTCTCCCTACTGAGTGCTTATCTTGGCATTGCCTCAAGTGTTGGTTTATTTT
GTTTTTCTTTGTTAATATTGGTGAGAACCAAACTATTGTGAGCTTGTGACCATTTTCTTTTTAC
TACTTTGGGGGATAACTGGGTGGGGTGGGCACAGGGGTGACACTTGTTAGGTTTAGGTCTTCAC
AGCTCAGTGCCTGCTTCAGAGTCTGACTTGTTGATGGAACTCTTTATCTAGAGCCACAGTTCTT
ACTCTAATTCTGTTACACTTTTTTGTAGCTTTATTCTGCCTTGCAATATAAACAATGTGTTAGG
CTCTGTGTTGATGAATAAAAGCTTCTCCCTTAATCCTTCCTTTTTTTACTTTAAATCATTTAAT
GGTTAAAGCTGTCAGCTGGCCTTCTTGGTCAAATCTGTGTTTCTAGTTATAATAAAGTTGCCAC
AGTAAGAA

hide sequence

RefSeq Acc Id:

XM_039079651 ⟹ XP_038935579

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	135,483,748 - 135,508,254 (+)	NCBI
mRatBN7.2	7	133,605,484 - 133,631,312 (+)	NCBI

RefSeq Acc Id:

XM_063263962 ⟹ XP_063120032

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	135,483,890 - 135,504,879 (+)	NCBI

RefSeq Acc Id:

XM_063263963 ⟹ XP_063120033

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	135,483,888 - 135,504,879 (+)	NCBI

RefSeq Acc Id:

XM_063263964 ⟹ XP_063120034

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	135,484,875 - 135,504,879 (+)	NCBI

RefSeq Acc Id:

XM_063263965 ⟹ XP_063120035

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	135,483,890 - 135,504,879 (+)	NCBI

RefSeq Acc Id:

XM_063263966 ⟹ XP_063120036

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	135,483,900 - 135,504,879 (+)	NCBI

RefSeq Acc Id:

XM_063263967 ⟹ XP_063120037

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	135,483,903 - 135,504,879 (+)	NCBI

RefSeq Acc Id:

XM_063263969 ⟹ XP_063120039

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	135,483,891 - 135,504,879 (+)	NCBI

RefSeq Acc Id:

XM_063263970 ⟹ XP_063120040

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	135,483,900 - 135,504,879 (+)	NCBI

RefSeq Acc Id:

XM_063263971 ⟹ XP_063120041

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	135,483,703 - 135,504,879 (+)	NCBI

RefSeq Acc Id:

XM_063263972 ⟹ XP_063120042

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	135,483,711 - 135,504,879 (+)	NCBI

RefSeq Acc Id:

XM_063263973 ⟹ XP_063120043

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	135,483,902 - 135,504,879 (+)	NCBI

RefSeq Acc Id:

XM_063263974 ⟹ XP_063120044

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	135,483,890 - 135,504,879 (+)	NCBI

RefSeq Acc Id:

XM_063263975 ⟹ XP_063120045

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	135,483,885 - 135,504,879 (+)	NCBI

RefSeq Acc Id:

XM_063263976 ⟹ XP_063120046

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	135,483,885 - 135,504,879 (+)	NCBI

RefSeq Acc Id:

XM_063263978 ⟹ XP_063120048

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	135,483,716 - 135,504,879 (+)	NCBI

RefSeq Acc Id:

XM_063263979 ⟹ XP_063120049

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	135,483,902 - 135,504,879 (+)	NCBI

RefSeq Acc Id:

XM_063263980 ⟹ XP_063120050

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	135,483,887 - 135,504,879 (+)	NCBI

RefSeq Acc Id:

XM_063263981 ⟹ XP_063120051

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	135,483,928 - 135,508,254 (+)	NCBI

RefSeq Acc Id:

XM_063263982 ⟹ XP_063120052

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	135,483,928 - 135,508,254 (+)	NCBI

RefSeq Acc Id:

XM_063263983 ⟹ XP_063120053

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	135,483,904 - 135,508,254 (+)	NCBI

RefSeq Acc Id:

XM_063263985 ⟹ XP_063120055

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	135,484,910 - 135,508,254 (+)	NCBI

RefSeq Acc Id:

XM_063263986 ⟹ XP_063120056

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	135,483,929 - 135,508,254 (+)	NCBI

RefSeq Acc Id:

XM_063263987 ⟹ XP_063120057

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	135,483,928 - 135,508,254 (+)	NCBI

RefSeq Acc Id:

XM_063263988 ⟹ XP_063120058

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	135,483,904 - 135,508,254 (+)	NCBI

RefSeq Acc Id:

XM_063263989 ⟹ XP_063120059

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	135,483,900 - 135,508,254 (+)	NCBI

RefSeq Acc Id:

XM_063263990 ⟹ XP_063120060

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	135,483,904 - 135,508,254 (+)	NCBI

RefSeq Acc Id:

XM_063263991 ⟹ XP_063120061

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	135,483,928 - 135,508,254 (+)	NCBI

RefSeq Acc Id:

XM_063263992 ⟹ XP_063120062

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	135,483,928 - 135,508,254 (+)	NCBI

RefSeq Acc Id:

XM_063263994 ⟹ XP_063120064

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	135,483,749 - 135,508,254 (+)	NCBI

RefSeq Acc Id:

XM_063263995 ⟹ XP_063120065

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	135,483,904 - 135,508,254 (+)	NCBI

RefSeq Acc Id:

XM_063263996 ⟹ XP_063120066

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	135,483,929 - 135,508,254 (+)	NCBI

RefSeq Acc Id:

XM_063263997 ⟹ XP_063120067

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	135,483,929 - 135,508,254 (+)	NCBI

RefSeq Acc Id:

XM_063263998 ⟹ XP_063120068

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	135,483,904 - 135,508,254 (+)	NCBI

RefSeq Acc Id:

XM_063263999 ⟹ XP_063120069

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	135,483,904 - 135,508,254 (+)	NCBI

RefSeq Acc Id:

XM_063264000 ⟹ XP_063120070

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	135,483,848 - 135,508,254 (+)	NCBI

RefSeq Acc Id:

XM_063264001 ⟹ XP_063120071

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	135,483,904 - 135,508,254 (+)	NCBI

RefSeq Acc Id:

XM_063264003 ⟹ XP_063120073

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	135,483,900 - 135,508,254 (+)	NCBI

RefSeq Acc Id:

XM_063264004 ⟹ XP_063120074

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	135,483,904 - 135,508,254 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001013241	(Get FASTA)	NCBI Sequence Viewer
	XP_006242480	(Get FASTA)	NCBI Sequence Viewer
	XP_006242481	(Get FASTA)	NCBI Sequence Viewer
	XP_006242482	(Get FASTA)	NCBI Sequence Viewer
	XP_006242484	(Get FASTA)	NCBI Sequence Viewer
	XP_006242487	(Get FASTA)	NCBI Sequence Viewer
	XP_006242489	(Get FASTA)	NCBI Sequence Viewer
	XP_017450495	(Get FASTA)	NCBI Sequence Viewer
	XP_017450496	(Get FASTA)	NCBI Sequence Viewer
	XP_017450499	(Get FASTA)	NCBI Sequence Viewer
	XP_017450500	(Get FASTA)	NCBI Sequence Viewer
	XP_017450503	(Get FASTA)	NCBI Sequence Viewer
	XP_038935579	(Get FASTA)	NCBI Sequence Viewer
	XP_063120032	(Get FASTA)	NCBI Sequence Viewer
	XP_063120033	(Get FASTA)	NCBI Sequence Viewer
	XP_063120034	(Get FASTA)	NCBI Sequence Viewer
	XP_063120035	(Get FASTA)	NCBI Sequence Viewer
	XP_063120036	(Get FASTA)	NCBI Sequence Viewer
	XP_063120037	(Get FASTA)	NCBI Sequence Viewer
	XP_063120039	(Get FASTA)	NCBI Sequence Viewer
	XP_063120040	(Get FASTA)	NCBI Sequence Viewer
	XP_063120041	(Get FASTA)	NCBI Sequence Viewer
	XP_063120042	(Get FASTA)	NCBI Sequence Viewer
	XP_063120043	(Get FASTA)	NCBI Sequence Viewer
	XP_063120044	(Get FASTA)	NCBI Sequence Viewer
	XP_063120045	(Get FASTA)	NCBI Sequence Viewer
	XP_063120046	(Get FASTA)	NCBI Sequence Viewer
	XP_063120048	(Get FASTA)	NCBI Sequence Viewer
	XP_063120049	(Get FASTA)	NCBI Sequence Viewer
	XP_063120050	(Get FASTA)	NCBI Sequence Viewer
	XP_063120051	(Get FASTA)	NCBI Sequence Viewer
	XP_063120052	(Get FASTA)	NCBI Sequence Viewer
	XP_063120053	(Get FASTA)	NCBI Sequence Viewer
	XP_063120055	(Get FASTA)	NCBI Sequence Viewer
	XP_063120056	(Get FASTA)	NCBI Sequence Viewer
	XP_063120057	(Get FASTA)	NCBI Sequence Viewer
	XP_063120058	(Get FASTA)	NCBI Sequence Viewer
	XP_063120059	(Get FASTA)	NCBI Sequence Viewer
	XP_063120060	(Get FASTA)	NCBI Sequence Viewer
	XP_063120061	(Get FASTA)	NCBI Sequence Viewer
	XP_063120062	(Get FASTA)	NCBI Sequence Viewer
	XP_063120064	(Get FASTA)	NCBI Sequence Viewer
	XP_063120065	(Get FASTA)	NCBI Sequence Viewer
	XP_063120066	(Get FASTA)	NCBI Sequence Viewer
	XP_063120067	(Get FASTA)	NCBI Sequence Viewer
	XP_063120068	(Get FASTA)	NCBI Sequence Viewer
	XP_063120069	(Get FASTA)	NCBI Sequence Viewer
	XP_063120070	(Get FASTA)	NCBI Sequence Viewer
	XP_063120071	(Get FASTA)	NCBI Sequence Viewer
	XP_063120073	(Get FASTA)	NCBI Sequence Viewer
	XP_063120074	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH78906	(Get FASTA)	NCBI Sequence Viewer
	AAH78909	(Get FASTA)	NCBI Sequence Viewer
	AAH97410	(Get FASTA)	NCBI Sequence Viewer
	EDL86832	(Get FASTA)	NCBI Sequence Viewer
	EDL86833	(Get FASTA)	NCBI Sequence Viewer
	EDL86835	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000052173
	ENSRNOP00000052173.4
	ENSRNOP00000075740.2
	ENSRNOP00000081612
	ENSRNOP00000081612.1
	ENSRNOP00000085087
	ENSRNOP00000085087.2
	ENSRNOP00000093976
	ENSRNOP00000093976.2
	ENSRNOP00000095172
	ENSRNOP00000095172.2
	ENSRNOP00000095661
	ENSRNOP00000095661.2

RefSeq Acc Id:

NP_001013241 ⟸ NM_001013223

- UniProtKB:

Q6AYU5 (UniProtKB/TrEMBL), D4ACH3 (UniProtKB/TrEMBL), A0A0G2KBC5 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MDTGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGP
TNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTG
AQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRPKPSSSPVI
FAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAIPQPDLTKLHQLAMQQSHF
PMTHGNTGFSGIESSSPEVKGYWGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQ
IKIANPVEGSTDRQVTITGSAASISLAQYLINVRLSSETGGMGSS

hide sequence

RefSeq Acc Id:	XP_006242480 ⟸ XM_006242418
- Peptide Label:	isoform X20
- UniProtKB:	Q6AYU2 (UniProtKB/TrEMBL), A0A8I5ZS12 (UniProtKB/TrEMBL), A0A0G2KBC5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MDTGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGP TNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTG AQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGG QDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTH GNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKI ANPVEGSTDRQVTITGSAASISLAQYLINVRLSSETGGMGSS hide sequence

RefSeq Acc Id:	XP_006242482 ⟸ XM_006242420
- Peptide Label:	isoform X21
- UniProtKB:	A0A0G2KBC5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MDTGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGP TNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTG AQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGG QDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTH GNTGFSGIESSSPEVKGYWGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIA NPVEGSTDRQVTITGSAASISLAQYLINVRLSSETGGMGSS hide sequence

RefSeq Acc Id:	XP_006242484 ⟸ XM_006242422
- Peptide Label:	isoform X24
- UniProtKB:	A0A8I6AGT9 (UniProtKB/TrEMBL), A6KCV8 (UniProtKB/TrEMBL), A0A0G2KBC5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MDTGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGP TNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTG AQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGG QDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTH GNTGFSAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVT ITGSAASISLAQYLINVRLSSETGGMGSS hide sequence

RefSeq Acc Id:	XP_006242487 ⟸ XM_006242425
- Peptide Label:	isoform X29
- UniProtKB:	A0A8I6AP00 (UniProtKB/TrEMBL), A6KCV9 (UniProtKB/TrEMBL), A0A0G2KBC5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MDTGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGP TNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTG AQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGG QAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSH ELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLINVR LSSETGGMGSS hide sequence

RefSeq Acc Id:	XP_006242489 ⟸ XM_006242427
- Peptide Label:	isoform X33
- UniProtKB:	A0A0G2KBC5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MDTGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGP TNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTG AQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGG QAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSAGLDASAQTTSHELTIPNDLIGCII GRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLINVRLSSETGGMGSS hide sequence

RefSeq Acc Id:	XP_006242481 ⟸ XM_006242419
- Peptide Label:	isoform X20
- UniProtKB:	Q6AYU2 (UniProtKB/TrEMBL), A0A8I5ZS12 (UniProtKB/TrEMBL), A0A0G2KBC5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MDTGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGP TNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTG AQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGG QDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTH GNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKI ANPVEGSTDRQVTITGSAASISLAQYLINVRLSSETGGMGSS hide sequence

RefSeq Acc Id:

XP_017450495 ⟸ XM_017595006

- Peptide Label:

isoform X3

- Sequence:

show sequence

MDTGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGP
TNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTG
AQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGG
QDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTH
GNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKI
ANPVEGSTDRQVTITGSAASISLAQYLINVSLENAKPSSQAASVTIPDHLSINLSQPSTPSSSS
SSSTTTPSLATAGTSDAPSSLPNPLPTAPCVSSLLGMKPIPLLALNVVSAAKGTGASATTTTTS
TVPCVTNKLKGEKQRFSPY

hide sequence

RefSeq Acc Id:

XP_017450499 ⟸ XM_017595010

- Peptide Label:

isoform X9

- Sequence:

show sequence

MDTGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGP
TNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTG
AQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGG
QAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSH
ELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLINVS
LENAKPSSQAASVTIPDHLSINLSQPSTPSSSSSSSTTTPSLATAGTSDAPSSLPNPLPTAPCV
SSLLGMKPIPLLALNVVSAAKGTGASATTTTTSTVPCVTNKLKGEKQRFSPY

hide sequence

RefSeq Acc Id:

XP_017450503 ⟸ XM_017595014

- Peptide Label:

isoform X15

- Sequence:

show sequence

MDTGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGP
TNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTG
AQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGG
QLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDLIGCIIG
RQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLINVSLENAKPSSQAASVT
IPDHLSINLSQPSTPSSSSSSSTTTPSLATAGTSDAPSSLPNPLPTAPCVSSLLGMKPIPLLAL
NVVSAAKGTGASATTTTTSTVPCVTNKLKGEKQRFSPY

hide sequence

RefSeq Acc Id:

XP_017450496 ⟸ XM_017595007

- Peptide Label:

isoform X3

- Sequence:

show sequence

MDTGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGP
TNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTG
AQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGG
QDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTH
GNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKI
ANPVEGSTDRQVTITGSAASISLAQYLINVSLENAKPSSQAASVTIPDHLSINLSQPSTPSSSS
SSSTTTPSLATAGTSDAPSSLPNPLPTAPCVSSLLGMKPIPLLALNVVSAAKGTGASATTTTTS
TVPCVTNKLKGEKQRFSPY

hide sequence

RefSeq Acc Id:

XP_017450500 ⟸ XM_017595011

- Peptide Label:

isoform X9

- Sequence:

show sequence

MDTGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGP
TNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTG
AQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGG
QAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSH
ELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLINVS
LENAKPSSQAASVTIPDHLSINLSQPSTPSSSSSSSTTTPSLATAGTSDAPSSLPNPLPTAPCV
SSLLGMKPIPLLALNVVSAAKGTGASATTTTTSTVPCVTNKLKGEKQRFSPY

hide sequence

Ensembl Acc Id:

ENSRNOP00000052173 ⟸ ENSRNOT00000055302

Ensembl Acc Id:

ENSRNOP00000075740 ⟸ ENSRNOT00000077687

RefSeq Acc Id:	XP_038935579 ⟸ XM_039079651
- Peptide Label:	isoform X30
- UniProtKB:	A0A0G2KBC5 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000085087 ⟸ ENSRNOT00000105769

Ensembl Acc Id:

ENSRNOP00000095661 ⟸ ENSRNOT00000099581

Ensembl Acc Id:

ENSRNOP00000081612 ⟸ ENSRNOT00000111669

Ensembl Acc Id:

ENSRNOP00000095172 ⟸ ENSRNOT00000120216

Ensembl Acc Id:

ENSRNOP00000093976 ⟸ ENSRNOT00000109477

RefSeq Acc Id:	XP_063120041 ⟸ XM_063263971
- Peptide Label:	isoform X8

RefSeq Acc Id:	XP_063120042 ⟸ XM_063263972
- Peptide Label:	isoform X10

RefSeq Acc Id:	XP_063120048 ⟸ XM_063263978
- Peptide Label:	isoform X14

RefSeq Acc Id:	XP_063120064 ⟸ XM_063263994
- Peptide Label:	isoform X29
- UniProtKB:	A0A8I6AP00 (UniProtKB/TrEMBL), A6KCV9 (UniProtKB/TrEMBL), A0A0G2KBC5 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063120070 ⟸ XM_063264000
- Peptide Label:	isoform X35
- UniProtKB:	A0A0G2KBC5 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063120045 ⟸ XM_063263975
- Peptide Label:	isoform X12

RefSeq Acc Id:	XP_063120046 ⟸ XM_063263976
- Peptide Label:	isoform X13

RefSeq Acc Id:	XP_063120050 ⟸ XM_063263980
- Peptide Label:	isoform X17

RefSeq Acc Id:	XP_063120033 ⟸ XM_063263963
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_063120032 ⟸ XM_063263962
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_063120035 ⟸ XM_063263965
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_063120044 ⟸ XM_063263974
- Peptide Label:	isoform X11

RefSeq Acc Id:	XP_063120039 ⟸ XM_063263969
- Peptide Label:	isoform X6

RefSeq Acc Id:	XP_063120059 ⟸ XM_063263989
- Peptide Label:	isoform X25
- UniProtKB:	A0A0G2KBC5 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063120073 ⟸ XM_063264003
- Peptide Label:	isoform X36
- UniProtKB:	A0A0G2KBC5 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063120036 ⟸ XM_063263966
- Peptide Label:	isoform X4

RefSeq Acc Id:	XP_063120040 ⟸ XM_063263970
- Peptide Label:	isoform X7

RefSeq Acc Id:	XP_063120049 ⟸ XM_063263979
- Peptide Label:	isoform X16

RefSeq Acc Id:	XP_063120043 ⟸ XM_063263973
- Peptide Label:	isoform X10

RefSeq Acc Id:	XP_063120037 ⟸ XM_063263967
- Peptide Label:	isoform X5

RefSeq Acc Id:	XP_063120053 ⟸ XM_063263983
- Peptide Label:	isoform X21
- UniProtKB:	A0A0G2KBC5 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063120058 ⟸ XM_063263988
- Peptide Label:	isoform X24
- UniProtKB:	A0A8I6AGT9 (UniProtKB/TrEMBL), A6KCV8 (UniProtKB/TrEMBL), A0A0G2KBC5 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063120060 ⟸ XM_063263990
- Peptide Label:	isoform X26
- UniProtKB:	A0A0G2KBC5 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063120065 ⟸ XM_063263995
- Peptide Label:	isoform X30
- UniProtKB:	A0A0G2KBC5 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063120068 ⟸ XM_063263998
- Peptide Label:	isoform X33
- UniProtKB:	A0A0G2KBC5 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063120071 ⟸ XM_063264001
- Peptide Label:	isoform X35
- UniProtKB:	A0A0G2KBC5 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063120069 ⟸ XM_063263999
- Peptide Label:	isoform X34
- UniProtKB:	A6KCW0 (UniProtKB/TrEMBL), A0A0G2KBC5 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063120074 ⟸ XM_063264004
- Peptide Label:	isoform X36
- UniProtKB:	A0A0G2KBC5 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063120051 ⟸ XM_063263981
- Peptide Label:	isoform X18
- UniProtKB:	A0A0G2KBC5 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063120052 ⟸ XM_063263982
- Peptide Label:	isoform X19
- UniProtKB:	D4ACH3 (UniProtKB/TrEMBL), Q6AYU5 (UniProtKB/TrEMBL), A0A0G2KBC5 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063120057 ⟸ XM_063263987
- Peptide Label:	isoform X23
- UniProtKB:	A0A0G2KBC5 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063120061 ⟸ XM_063263991
- Peptide Label:	isoform X27
- UniProtKB:	Q4V8F6 (UniProtKB/TrEMBL), A0A0G2KBC5 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063120062 ⟸ XM_063263992
- Peptide Label:	isoform X28
- UniProtKB:	A0A0G2KBC5 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063120056 ⟸ XM_063263986
- Peptide Label:	isoform X22
- UniProtKB:	A0A0G2KBC5 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063120066 ⟸ XM_063263996
- Peptide Label:	isoform X31
- UniProtKB:	A0A0G2KBC5 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063120067 ⟸ XM_063263997
- Peptide Label:	isoform X32
- UniProtKB:	A0A0G2KBC5 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063120034 ⟸ XM_063263964
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_063120055 ⟸ XM_063263985
- Peptide Label:	isoform X21
- UniProtKB:	A0A0G2KBC5 (UniProtKB/TrEMBL)

Protein Domains

K Homology

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q6AYU5-F1-model_v2	AlphaFold	Q6AYU5	1-365	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13695708

Promoter ID:

EPDNEW_R6227

Type:

initiation region

Name:

Pcbp2_1

Description:

poly binding protein 2

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	7	144,078,432 - 144,078,492	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1309626	AgrOrtholog
BioCyc Gene	G2FUF-31934	BioCyc
Ensembl Genes	ENSRNOG00000036852	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000055302	ENTREZGENE
	ENSRNOT00000055302.5	UniProtKB/TrEMBL
	ENSRNOT00000077687.3	UniProtKB/TrEMBL
	ENSRNOT00000099581	ENTREZGENE
	ENSRNOT00000099581.2	UniProtKB/TrEMBL
	ENSRNOT00000105769	ENTREZGENE
	ENSRNOT00000105769.2	UniProtKB/TrEMBL
	ENSRNOT00000109477	ENTREZGENE
	ENSRNOT00000109477.2	UniProtKB/TrEMBL
	ENSRNOT00000111669	ENTREZGENE
	ENSRNOT00000111669.2	UniProtKB/TrEMBL
	ENSRNOT00000120216	ENTREZGENE
	ENSRNOT00000120216.2	UniProtKB/TrEMBL
Gene3D-CATH	3.30.1370.10	UniProtKB/TrEMBL
IMAGE_CLONE	IMAGE:7112287	IMAGE-MGC_LOAD
	IMAGE:7127139	IMAGE-MGC_LOAD
	IMAGE:7454176	IMAGE-MGC_LOAD
InterPro	IPR004087	UniProtKB/TrEMBL
	KH_dom_type_1_sf	UniProtKB/TrEMBL
	KH_type_1	UniProtKB/TrEMBL
KEGG Report	rno:363005	UniProtKB/TrEMBL
MGC_CLONE	MGC:114455	IMAGE-MGC_LOAD
	MGC:93663	IMAGE-MGC_LOAD
	MGC:93668	IMAGE-MGC_LOAD
NCBI Gene	363005	ENTREZGENE
PANTHER	KH DOMAIN CONTAINING RNA BINDING PROTEIN	UniProtKB/TrEMBL
Pfam	KH_1	UniProtKB/TrEMBL
PhenoGen	Pcbp2	PhenoGen
PROSITE	KH_TYPE_1	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000036852	RatGTEx
SMART	SM00322	UniProtKB/TrEMBL
Superfamily-SCOP	SSF54791	UniProtKB/TrEMBL
UniProt	A0A0G2KBC5	ENTREZGENE, UniProtKB/TrEMBL
	A0A0G2QC00_RAT	UniProtKB/TrEMBL
	A0A8I5ZS12	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I5ZZC0_RAT	UniProtKB/TrEMBL
	A0A8I6AGT9	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6AP00	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6APK5_RAT	UniProtKB/TrEMBL
	A6KCV8	ENTREZGENE, UniProtKB/TrEMBL
	A6KCV9	ENTREZGENE, UniProtKB/TrEMBL
	A6KCW0	ENTREZGENE, UniProtKB/TrEMBL
	D4ACH3	ENTREZGENE
	Q4V8F6	ENTREZGENE, UniProtKB/TrEMBL
	Q6AYU2	ENTREZGENE, UniProtKB/TrEMBL
	Q6AYU5	ENTREZGENE, UniProtKB/TrEMBL
UniProt Secondary	D4ACH3	UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2005-12-06	Pcbp2	poly(rC) binding protein 2	Pcbp2_predicted	poly(rC) binding protein 2 (predicted)	Symbol and Name updated	1559027	APPROVED
2005-01-12	Pcbp2_predicted	poly(rC) binding protein 2 (predicted)			Symbol and Name status set to approved	70820	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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RGD Manual Annotations