Dnal4 (dynein, axonemal, light chain 4) - Rat Genome Database

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Gene: Dnal4 (dynein, axonemal, light chain 4) Rattus norvegicus
Analyze
Symbol: Dnal4 (Ensembl: Dnal4-ps1)
Name: dynein, axonemal, light chain 4 (Ensembl:dynein, axonemal, light chain 4, pseudogene 1)
RGD ID: 1309099
Description: Predicted to enable identical protein binding activity. Predicted to be involved in microtubule-based process. Predicted to be located in cilium; cytoplasm; and microtubule. Predicted to be part of dynein complex. Human ortholog(s) of this gene implicated in congenital mirror movement disorder. Orthologous to human DNAL4 (dynein axonemal light chain 4); PARTICIPATES IN Huntington's disease pathway; INTERACTS WITH 2,4-dinitrotoluene; aripiprazole; bisphenol A.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: Dnalc4; dynein axonemal light chain 4; dynein light chain 4, axonemal; LOC300078; MGC105573
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Related Pseudogenes: Dnal4-ps1  
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr87113,192,807 - 113,205,665 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl2021,722,009 - 21,723,262 (+)EnsemblGRCr8
GRCr8 Ensembl7113,188,704 - 113,205,752 (-)EnsemblGRCr8
mRatBN7.27111,312,424 - 111,325,283 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl2021,723,200 - 21,724,462 (+)EnsemblmRatBN7.2
mRatBN7.2 Ensembl7111,312,427 - 111,325,283 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx7113,060,279 - 113,073,138 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.07115,283,819 - 115,296,678 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.07115,253,174 - 115,266,033 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.07120,987,438 - 121,000,272 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl7120,987,452 - 121,000,272 (-)Ensemblrn6Rnor6.0
Rnor_5.07120,978,397 - 120,991,231 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.47117,999,413 - 118,012,247 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera7107,643,071 - 107,655,905 (-)NCBICelera
Cytogenetic Map7q34NCBI
JBrowse:




Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
3. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
4. GOA pipeline RGD automated data pipeline
5. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:12477932  


Genomics

Comparative Map Data
Dnal4
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr87113,192,807 - 113,205,665 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl2021,722,009 - 21,723,262 (+)EnsemblGRCr8
GRCr8 Ensembl7113,188,704 - 113,205,752 (-)EnsemblGRCr8
mRatBN7.27111,312,424 - 111,325,283 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl2021,723,200 - 21,724,462 (+)EnsemblmRatBN7.2
mRatBN7.2 Ensembl7111,312,427 - 111,325,283 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx7113,060,279 - 113,073,138 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.07115,283,819 - 115,296,678 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.07115,253,174 - 115,266,033 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.07120,987,438 - 121,000,272 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl7120,987,452 - 121,000,272 (-)Ensemblrn6Rnor6.0
Rnor_5.07120,978,397 - 120,991,231 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.47117,999,413 - 118,012,247 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera7107,643,071 - 107,655,905 (-)NCBICelera
Cytogenetic Map7q34NCBI
DNAL4
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382238,778,508 - 38,794,143 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2238,778,508 - 38,794,198 (-)Ensemblhg38GRCh38
GRCh372239,174,513 - 39,190,148 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 362237,504,459 - 37,520,107 (-)NCBIBuild 36Build 36hg18NCBI36
Build 342237,499,013 - 37,514,661NCBI
Celera2222,981,164 - 22,996,813 (-)NCBICelera
Cytogenetic Map22q13.1NCBI
HuRef2222,140,179 - 22,155,827 (-)NCBIHuRef
CHM1_12239,133,448 - 39,149,113 (-)NCBICHM1_1
T2T-CHM13v2.02239,248,847 - 39,264,481 (-)NCBIT2T-CHM13v2.0
Dnal4
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391579,645,654 - 79,658,649 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1579,645,654 - 79,662,050 (-)EnsemblGRCm39 EnsemblGRCm39
GRCm381579,761,449 - 79,774,467 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1579,761,453 - 79,777,849 (-)Ensemblmm10GRCm38
MGSCv371579,591,879 - 79,604,897 (-)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv361579,588,711 - 79,601,690 (-)NCBIMGSCv36mm8
Celera1581,880,203 - 81,893,202 (-)NCBICelera
Cytogenetic Map15E1NCBI
cM Map1537.85NCBI
Dnal4
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541324,896,680 - 24,908,602 (-)Ensembl
ChiLan1.0NW_00495541324,897,329 - 24,908,484 (-)NCBIChiLan1.0ChiLan1.0
DNAL4
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22348,634,439 - 48,650,194 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12251,325,823 - 51,341,589 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02219,693,835 - 19,709,611 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12237,510,687 - 37,526,409 (-)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2237,510,687 - 37,526,409 (-)EnsemblpanPan2panpan1.1
DNAL4
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11026,023,706 - 26,037,883 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1026,030,850 - 26,035,690 (+)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha1025,979,457 - 25,995,024 (+)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.01026,814,611 - 26,830,389 (+)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1026,814,616 - 26,826,597 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11026,536,569 - 26,552,124 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01026,847,407 - 26,862,970 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01027,024,163 - 27,039,737 (+)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Dnal4
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244049459,568,878 - 9,588,913 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364922,579,256 - 2,590,576 (+)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049364922,579,315 - 2,599,321 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
DNAL4
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl59,236,654 - 9,248,737 (+)EnsemblsusScr11Sscrofa11.1
Sscrofa11.159,236,653 - 9,248,741 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.256,482,128 - 6,494,212 (+)NCBISscrofa10.2Sscrofa10.2susScr3
DNAL4
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11921,445,817 - 21,462,025 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1921,446,765 - 21,450,325 (-)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_023666045104,296,695 - 104,312,769 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Dnal4
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247529,349,795 - 9,362,326 (+)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_0046247529,350,474 - 9,361,901 (+)NCBIHetGla 1.0HetGla 1.0hetGla2
Dnal4
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v11819,970,476 - 19,970,793 (-)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Dnal4
31 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:140
Count of miRNA genes:96
Interacting mature miRNAs:115
Transcripts:ENSRNOT00000020941
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1300179Kidm5Kidney mass QTL 53.51kidney mass (VT:0002707)left kidney wet weight (CMO:0000083)792388565119280177Rat
1331728Bp214Blood pressure QTL 2142.825arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)782111245123048330Rat
1331731Bp216Blood pressure QTL 2162.851arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)7104186212135371468Rat
70159Bp61Blood pressure QTL 610.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)773618702118618702Rat
631687Hcas1Hepatocarcinoma susceptibility QTL 13.90.001liver integrity trait (VT:0010547)liver tumorous lesion volume to total liver volume ratio (CMO:0001082)793302009131686183Rat
1357338Stl17Serum triglyceride level QTL 173.23blood triglyceride amount (VT:0002644)serum triglyceride level (CMO:0000360)771621154114982716Rat
61397Bw17Body weight QTL 176.3body mass (VT:0001259)body weight (CMO:0000012)795485047137014596Rat
631504Cm27Cardiac mass QTL 273.45heart left ventricle mass (VT:0007031)heart left ventricle wet weight (CMO:0000071)746307490127866166Rat
634322Bw12Body weight QTL 120body mass (VT:0001259)body weight (CMO:0000012)785043242130043242Rat
70173Niddm19Non-insulin dependent diabetes mellitus QTL 194.330.00005blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)785497398130497398Rat
1549899Stresp8Stress response QTL 84.370.0008stress-related behavior trait (VT:0010451)defensive burying duration (CMO:0001961)792362341137014596Rat
2317052Aia17Adjuvant induced arthritis QTL 172.13joint integrity trait (VT:0010548)left rear ankle joint diameter (CMO:0002149)783626689128626689Rat
631529Tls2T-lymphoma susceptibility QTL 200.001thymus integrity trait (VT:0010555)percentage of study population developing T-cell lymphomas during a period of time (CMO:0001911)782111382132099989Rat
731176Glom5Glomerulus QTL 52.50.0035kidney glomerulus morphology trait (VT:0005325)count of superficial glomeruli not directly contacting the kidney surface (CMO:0001002)798549867137014596Rat
7411607Foco15Food consumption QTL 150.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)777807807122807807Rat
631201Panci1Pancreas inflammation QTL 100.001pancreas integrity trait (VT:0010560)percentage of study population displaying chronic pancreatitis at a point in time (CMO:0001214)773557047118557047Rat
634336Anxrr17Anxiety related response QTL 173.66locomotor behavior trait (VT:0001392)number of entries into a discrete space in an experimental apparatus (CMO:0000960)71509236116977875Rat
1331768Kidm10Kidney mass QTL 104.62096kidney mass (VT:0002707)left kidney wet weight (CMO:0000083)782111245123048330Rat
2313102Bmd79Bone mineral density QTL 792.30.0001tibia mineral mass (VT:1000283)total volumetric bone mineral density (CMO:0001728)796700404118618702Rat
61357Bp38Blood pressure QTL 381.60.052arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)740540077123682549Rat
1331748Bp215Blood pressure QTL 2154.043arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)7110725024135371468Rat
2316947Rf58Renal function QTL 587.8kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)749682832115766396Rat
10450862Kidm55Kidney mass QTL 554.9kidney mass (VT:0002707)kidney weight (CMO:0000081)772725037117725037Rat
61428Scl3Serum cholesterol level QTL 33.2blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)7100548246137014596Rat
1331746Kidm9Kidney mass QTL 93.934kidney mass (VT:0002707)right kidney wet weight (CMO:0000082)782111245134948181Rat
7411654Foco25Food consumption QTL 259.30.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)777807807122807807Rat
10450856Livw4Liver weight QTL 43.8liver mass (VT:0003402)liver weight (CMO:0000092)772725037117725037Rat
2316955Stl24Serum triglyceride level QTL 247.1blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)749682832115766396Rat
10402855Bp379Blood pressure QTL 3790.21arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)778682549123682549Rat
2316952Pur22Proteinuria QTL 225.2urine protein amount (VT:0005160)urine protein level (CMO:0000591)749682832115766396Rat
631540Bw9Body weight QTL 94.5body mass (VT:0001259)body weight (CMO:0000012)771621154119349044Rat
1358891Bp265Blood pressure QTL 2652.21arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)771827901136544683Rat

Markers in Region
RH127229  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.27111,312,468 - 111,312,699 (+)MAPPERmRatBN7.2
Rnor_6.07120,987,483 - 120,987,713NCBIRnor6.0
Rnor_5.07120,978,442 - 120,978,672UniSTSRnor5.0
RGSC_v3.47117,999,458 - 117,999,688UniSTSRGSC3.4
Celera7107,643,116 - 107,643,346UniSTS
Cytogenetic Map7q34UniSTS
AB010031  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.22021,724,159 - 21,724,244 (+)MAPPERmRatBN7.2
Rnor_6.02023,147,944 - 23,148,028NCBIRnor6.0
Rnor_5.02025,236,463 - 25,236,547UniSTSRnor5.0
RGSC_v3.42022,563,443 - 22,563,527UniSTSRGSC3.4
Celera2023,081,374 - 23,081,458UniSTS
Cytogenetic Map7q34UniSTS
RH141025  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.27111,312,563 - 111,312,752 (+)MAPPERmRatBN7.2
Rnor_6.07120,987,578 - 120,987,766NCBIRnor6.0
Rnor_5.07120,978,537 - 120,978,725UniSTSRnor5.0
RGSC_v3.47117,999,553 - 117,999,741UniSTSRGSC3.4
RGSC_v3.47118,119,447 - 118,119,635UniSTSRGSC3.4
Celera7107,643,211 - 107,643,399UniSTS
Cytogenetic Map7q34UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 67 162 91 90 59 89 59 6 353 189 11 141 81 92 31 17 17

Sequence


Ensembl Acc Id: ENSRNOT00000020941   ⟹   ENSRNOP00000020941
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl7113,192,807 - 113,205,665 (-)Ensembl
mRatBN7.2 Ensembl7111,312,427 - 111,325,283 (-)Ensembl
Rnor_6.0 Ensembl7120,987,452 - 121,000,272 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000147712   ⟹   ENSRNOP00000108423
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl7113,188,704 - 113,205,665 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000165958   ⟹   ENSRNOP00000102783
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl7113,192,756 - 113,205,752 (-)Ensembl
RefSeq Acc Id: NM_001009666   ⟹   NP_001009666
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr87113,192,807 - 113,205,665 (-)NCBI
mRatBN7.27111,312,424 - 111,325,283 (-)NCBI
Rnor_6.07120,987,438 - 121,000,272 (-)NCBI
Rnor_5.07120,978,397 - 120,991,231 (-)NCBI
RGSC_v3.47117,999,413 - 118,012,247 (-)RGD
Celera7107,643,071 - 107,655,905 (-)RGD
Sequence:
Protein Sequences
Protein RefSeqs NP_001009666 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAH87688 (Get FASTA)   NCBI Sequence Viewer  
  EDM15781 (Get FASTA)   NCBI Sequence Viewer  
  EDM15783 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000020941
  ENSRNOP00000020941.6
  ENSRNOP00000086634.1
  ENSRNOP00000102783.1
  ENSRNOP00000108423.1
RefSeq Acc Id: NP_001009666   ⟸   NM_001009666
- UniProtKB: Q5PPH7 (UniProtKB/TrEMBL),   D3ZIE8 (UniProtKB/TrEMBL),   A0A9K3Y7T6 (UniProtKB/TrEMBL),   A0A8I6A5P7 (UniProtKB/TrEMBL),   A6JKX4 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000020941   ⟸   ENSRNOT00000020941
Ensembl Acc Id: ENSRNOP00000108423   ⟸   ENSRNOT00000147712
Ensembl Acc Id: ENSRNOP00000102783   ⟸   ENSRNOT00000165958

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q5PPH7-F1-model_v2 AlphaFold Q5PPH7 1-105 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13695487
Promoter ID:EPDNEW_R6012
Type:initiation region
Name:Dnal4_1
Description:dynein, axonemal, light chain 4
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.07121,000,260 - 121,000,320EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1309099 AgrOrtholog
BioCyc Gene G2FUF-32744 BioCyc
Ensembl Genes ENSRNOG00000015583 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
  ENSRNOG00000067902 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000020941 ENTREZGENE
  ENSRNOT00000020941.9 UniProtKB/TrEMBL
  ENSRNOT00000110001.2 UniProtKB/TrEMBL
  ENSRNOT00000147712.1 UniProtKB/TrEMBL
  ENSRNOT00000165958.1 UniProtKB/TrEMBL
Gene3D-CATH 3.30.740.10 UniProtKB/TrEMBL
IMAGE_CLONE IMAGE:7311257 IMAGE-MGC_LOAD
InterPro DLC_sf UniProtKB/TrEMBL
  Dynein_light_chain_typ-1/2 UniProtKB/TrEMBL
KEGG Report rno:300078 UniProtKB/TrEMBL
MGC_CLONE MGC:105573 IMAGE-MGC_LOAD
NCBI Gene 300078 ENTREZGENE
PANTHER DYNEIN AXONEMAL LIGHT CHAIN 4 UniProtKB/TrEMBL
  Dynein_light1 UniProtKB/TrEMBL
Pfam Dynein_light UniProtKB/TrEMBL
PhenoGen Dnal4 PhenoGen
RatGTEx ENSRNOG00000015583 RatGTEx
  ENSRNOG00000067902 RatGTEx
SMART Dynein_light UniProtKB/TrEMBL
Superfamily-SCOP SSF54648 UniProtKB/TrEMBL
UniProt A0A8I6A5P7 ENTREZGENE, UniProtKB/TrEMBL
  A0A9K3Y7T6 ENTREZGENE, UniProtKB/TrEMBL
  A0ABK0LBE0_RAT UniProtKB/TrEMBL
  A0ABK0M0I8_RAT UniProtKB/TrEMBL
  A6JKX4 ENTREZGENE, UniProtKB/TrEMBL
  D3ZIE8 ENTREZGENE
  Q5PPH7 ENTREZGENE, UniProtKB/TrEMBL
UniProt Secondary D3ZIE8 UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2008-10-17 Dnal4  dynein, axonemal, light chain 4  Dnalc4  dynein, axonemal, light chain 4  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2005-12-06 Dnalc4  dynein, axonemal, light chain 4  Dnalc4_predicted  dynein, axonemal, light chain 4 (predicted)  Symbol and Name updated 1559027 APPROVED
2005-01-12 Dnalc4_predicted  dynein, axonemal, light chain 4 (predicted)      Symbol and Name status set to approved 70820 APPROVED