Imported Disease Annotations - OMIMObject Symbol | Species | Term | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | Ddost | Rat | congenital disorder of glycosylation Ir | | ISO | DDOST (Homo sapiens) | 7240710 | | OMIM | | | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Imported Disease Annotations - OMIMObject Symbol | Species | Term | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | Ddost | Rat | congenital disorder of glycosylation Ir | | ISO | DDOST (Homo sapiens) | 7240710 | | OMIM | | | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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| # | Reference Title | Reference Citation |
| 1. | Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. | Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27. |
| 2. | Rat ISS GO annotations from GOA human gene data--August 2006 | GOA data from the GO Consortium |
| 3. | Rat ISS GO annotations from MGI mouse gene data--August 2006 | MGD data from the GO Consortium |
| 4. | OMIM Disease Annotation Pipeline | OMIM Disease Annotation Pipeline |
| 5. | KEGG Annotation Import Pipeline | Pipeline to import KEGG annotations from KEGG into RGD |
| 6. | GOA pipeline | RGD automated data pipeline |
| 7. | ClinVar Automated Import and Annotation Pipeline | RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations |
| 8. | Data Import for Chemical-Gene Interactions | RGD automated import pipeline for gene-chemical interactions |
| PMID:9367678 | PMID:9642163 | PMID:12477932 | PMID:12887896 | PMID:19946888 | PMID:21700703 | PMID:22467853 | PMID:26824730 |
| Ddost (Rattus norvegicus - Norway rat) |
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| DDOST (Homo sapiens - human) |
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| Ddost (Mus musculus - house mouse) |
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| Ddost (Chinchilla lanigera - long-tailed chinchilla) |
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| DDOST (Pan paniscus - bonobo/pygmy chimpanzee) |
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| DDOST (Canis lupus familiaris - dog) |
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| Ddost (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
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| DDOST (Sus scrofa - pig) |
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| DDOST (Chlorocebus sabaeus - green monkey) |
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| Ddost (Heterocephalus glaber - naked mole-rat) |
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| Ddost (Rattus rattus - black rat) |
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Variants in Ddost
207 total Variants
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| The detailed report is available here: | ![]() | Full Report | ![]() | CSV | ![]() | TAB | ![]() | Printer |
miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/). For more information about miRGate, see PMID:25858286 or access the full paper here. |
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| The following QTLs overlap with this region. | ![]() | Full Report | ![]() | CSV | ![]() | TAB | ![]() | Printer | ![]() | Gviewer |
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alimentary part of gastrointestinal system
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appendage
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circulatory system
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ectoderm
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endocrine system
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endoderm
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exocrine system
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hemolymphoid system
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hepatobiliary system
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integumental system
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mesenchyme
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mesoderm
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musculoskeletal system
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nervous system
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renal system
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reproductive system
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respiratory system
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sensory system
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visual system
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| 16 | 12 | 67 | 164 | 91 | 90 | 59 | 92 | 59 | 6 | 356 | 192 | 11 | 143 | 81 | 92 | 31 | 17 | 17 |
| RefSeq Transcripts | NM_001012104 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
| GenBank Nucleotide | AF473842 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
| BC082075 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| FQ214046 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| FQ228905 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| FQ229122 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| JAXUCZ010000005 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
| Ensembl Acc Id: | ENSRNOT00000067228 ⟹ ENSRNOP00000062365 | ||||||||||||||||
| Type: | CODING | ||||||||||||||||
| Position: |
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| RefSeq Acc Id: | NM_001012104 ⟹ NP_001012104 | ||||||||||||||||||||||||||||
| RefSeq Status: | PROVISIONAL | ||||||||||||||||||||||||||||
| Type: | CODING | ||||||||||||||||||||||||||||
| Position: |
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| Sequence: |
| Protein RefSeqs | NP_001012104 | (Get FASTA) | NCBI Sequence Viewer |
| GenBank Protein | AAH82075 | (Get FASTA) | NCBI Sequence Viewer |
| Ensembl Protein | ENSRNOP00000062365 | ||
| GenBank Protein | Q641Y0 | (Get FASTA) | NCBI Sequence Viewer |
| RefSeq Acc Id: | NP_001012104 ⟸ NM_001012104 |
| - Peptide Label: | precursor |
| - UniProtKB: | Q641Y0 (UniProtKB/Swiss-Prot), A6ITG9 (UniProtKB/TrEMBL) |
| - Sequence: |
| Ensembl Acc Id: | ENSRNOP00000062365 ⟸ ENSRNOT00000067228 |
| Name | Modeler | Protein Id | AA Range | Protein Structure |
| AF-Q641Y0-F1-model_v2 | AlphaFold | Q641Y0 | 1-441 | view protein structure |
| eQTL | View at Phenogen | |
| WGCNA | View at Phenogen | |
| Tissue/Strain Expression | View at Phenogen |
| RGD ID: | 13694188 | ||||||||
| Promoter ID: | EPDNEW_R4712 | ||||||||
| Type: | initiation region | ||||||||
| Name: | Ddost_1 | ||||||||
| Description: | dolichyl-diphosphooligosaccharide--protein glycosyltransferasenon-catalytic subunit | ||||||||
| SO ACC ID: | SO:0000170 | ||||||||
| Source: | EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/) | ||||||||
| Experiment Methods: | Single-end sequencing. | ||||||||
| Position: |
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| Database | Acc Id | Source(s) |
| AGR Gene | RGD:1308970 | AgrOrtholog |
| BioCyc Gene | G2FUF-39458 | BioCyc |
| BioCyc Pathway | MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS [protein N-glycosylation initial phase (eukaryotic)] | BioCyc |
| BioCyc Pathway Image | MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS | BioCyc |
| Ensembl Genes | ENSRNOG00000015079 | Ensembl, ENTREZGENE |
| Ensembl Transcript | ENSRNOT00000067228 | ENTREZGENE |
| IMAGE_CLONE | IMAGE:7133207 | IMAGE-MGC_LOAD |
| InterPro | DDOST_48_kDa_subunit | UniProtKB/Swiss-Prot |
| OST48_MD | UniProtKB/Swiss-Prot | |
| OST48_N | UniProtKB/Swiss-Prot | |
| KEGG Report | rno:313648 | UniProtKB/Swiss-Prot |
| MGC_CLONE | MGC:95243 | IMAGE-MGC_LOAD |
| NCBI Gene | 313648 | ENTREZGENE |
| PANTHER | DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE 48 KDA SUBUNIT | UniProtKB/Swiss-Prot |
| PTHR10830 | UniProtKB/Swiss-Prot | |
| Pfam | DDOST_48kD | UniProtKB/Swiss-Prot |
| OST48_MD | UniProtKB/Swiss-Prot | |
| PhenoGen | Ddost | PhenoGen |
| RatGTEx | ENSRNOG00000015079 | RatGTEx |
| UniProt | A0A8L2QU76_RAT | UniProtKB/TrEMBL |
| A6ITG9 | ENTREZGENE, UniProtKB/TrEMBL | |
| OST48_RAT | UniProtKB/Swiss-Prot, ENTREZGENE |
| Date | Current Symbol | Current Name | Previous Symbol | Previous Name | Description | Reference | Status |
|---|---|---|---|---|---|---|---|
| 2016-03-08 | Ddost | dolichyl-diphosphooligosaccharide--protein glycosyltransferase non-catalytic subunit | Ddost | dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit (non-catalytic) | Nomenclature updated to reflect human and mouse nomenclature | 1299863 | APPROVED |
| 2015-03-24 | Ddost | dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit (non-catalytic) | Ddost | dolichyl-diphosphooligosaccharide-protein glycosyltransferase | Nomenclature updated to reflect human and mouse nomenclature | 1299863 | APPROVED |
| 2008-09-25 | Ddost | dolichyl-diphosphooligosaccharide-protein glycosyltransferase | Ddost | dolichyl-di-phosphooligosaccharide-protein glycotransferase | Nomenclature updated to reflect human and mouse nomenclature | 1299863 | APPROVED |
| 2008-05-12 | Ddost | dolichyl-di-phosphooligosaccharide-protein glycotransferase | Ddost_predicted | dolichyl-di-phosphooligosaccharide-protein glycotransferase (predicted) | Symbol and Name updated | 1299863 | APPROVED |
| 2008-05-12 | Ddost_predicted | dolichyl-di-phosphooligosaccharide-protein glycotransferase (predicted) | Ddost | dolichyl-di-phosphooligosaccharide-protein glycotransferase | Data merged from RGD:621875 | 737654 | APPROVED |
| 2005-01-20 | Ddost | dolichyl-di-phosphooligosaccharide-protein glycotransferase | Symbol and Name status set to approved | 1299863 | APPROVED | ||
| 2005-01-12 | Ddost_predicted | dolichyl-di-phosphooligosaccharide-protein glycotransferase (predicted) | Symbol and Name status set to approved | 70820 | APPROVED | ||
| 2002-08-07 | Ddost | dolichyl-di-phosphooligosaccharide-protein glycotransferase | Symbol and Name status set to provisional | 70820 | PROVISIONAL |