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Gene: Ralgdsl1 (ral guanine nucleotide dissociation stimulator like 1) Rattus norvegicus

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Symbol:

Ralgdsl1

Name:

ral guanine nucleotide dissociation stimulator like 1

RGD ID:

1308947

Description:

Predicted to enable guanyl-nucleotide exchange factor activity. Predicted to be involved in Ras protein signal transduction. Predicted to be active in plasma membrane. Orthologous to human RGL1 (ral guanine nucleotide dissociation stimulator like 1); INTERACTS WITH 1,1,1-trichloro-2,2-bis(4-hydroxyphenyl)ethane; 2,3,7,8-tetrachlorodibenzodioxine; 2,6-dinitrotoluene.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

LOC289080; ral guanine nucleotide dissociation stimulator,-like 1; ral guanine nucleotide dissociation stimulator-like 1; Rgl1

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	13	67,184,402 - 67,454,019 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	13	67,184,402 - 67,454,019 (-)	Ensembl				GRCr8
mRatBN7.2	13	64,634,489 - 64,904,170 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	13	64,635,246 - 64,904,191 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	13	67,243,711 - 67,506,393 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	13	68,520,706 - 68,799,251 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	13	65,781,720 - 66,050,138 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Dahl_SR_JrHsd	13	66,534,347 - 66,797,027 (-)	NCBI		Dahl_SR_JrHsd
Lyon_Normotensive	13	66,748,721 - 67,011,399 (-)	NCBI		Lyon_Normotensive
Lyon_Hypertensive	13	66,684,957 - 66,947,651 (-)	NCBI		Lyon_Hypertensive
F344_StmMcwi	13	66,739,813 - 67,002,351 (-)	NCBI		F344_StmMcwi
Rnor_6.0	13	69,909,122 - 70,174,590 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	13	69,909,096 - 70,174,565 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	13	74,881,101 - 75,145,659 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	13	67,468,218 - 67,754,947 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	13	64,547,086 - 64,810,801 (-)	NCBI		Celera
RGSC_v3.1	13	67,483,775 - 67,596,194 (-)	NCBI
Cytogenetic Map	13	q21	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(-)-demecolcine (ISO)

(-)-epigallocatechin 3-gallate (ISO)

1,1,1-trichloro-2,2-bis(4-hydroxyphenyl)ethane (EXP)

1,1-dichloroethene (ISO)

1,2-dimethylhydrazine (ISO)

17alpha-ethynylestradiol (ISO)

17beta-estradiol (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2,4-dibromophenyl 2,4,5-tribromophenyl ether (ISO)

2,6-dinitrotoluene (EXP)

3',5'-cyclic AMP (EXP)

3-chloropropane-1,2-diol (EXP)

4,4'-sulfonyldiphenol (ISO)

5-aza-2'-deoxycytidine (ISO)

acetamide (EXP)

aflatoxin B1 (ISO)

amphetamine (EXP)

aristolochic acid A (ISO)

arsane (ISO)

arsenic atom (ISO)

arsenite(3-) (ISO)

arsenous acid (ISO)

atrazine (ISO)

benzo[a]pyrene (ISO)

benzo[e]pyrene (ISO)

bisphenol A (EXP,ISO)

Butylbenzyl phthalate (ISO)

butyric acid (ISO)

cadmium atom (EXP)

cadmium dichloride (EXP)

carbamazepine (ISO)

CGP 52608 (ISO)

chromium(6+) (ISO)

cisplatin (ISO)

copper(II) sulfate (ISO)

Cuprizon (EXP)

cyclosporin A (ISO)

cytarabine (ISO)

diarsenic trioxide (ISO)

doxorubicin (ISO)

endosulfan (EXP)

entinostat (ISO)

ethanol (ISO)

fipronil (EXP)

folic acid (ISO)

formaldehyde (ISO)

FR900359 (ISO)

fulvestrant (ISO)

gentamycin (EXP)

hydrogen peroxide (ISO)

hypochlorous acid (ISO)

isobutanol (ISO)

ketoconazole (EXP)

leflunomide (ISO)

manganese atom (ISO)

manganese(0) (ISO)

manganese(II) chloride (ISO)

melphalan (ISO)

menadione (ISO)

methapyrilene (ISO)

methyl methanesulfonate (ISO)

methylseleninic acid (ISO)

mocetinostat (ISO)

N,N-diethyl-m-toluamide (EXP)

nickel sulfate (ISO)

ochratoxin A (ISO)

oxaliplatin (EXP)

ozone (ISO)

panobinostat (ISO)

paracetamol (ISO)

permethrin (EXP)

pirinixic acid (ISO)

potassium chromate (ISO)

quercetin (ISO)

raloxifene (ISO)

rotenone (ISO)

silver atom (ISO)

silver(0) (ISO)

sodium arsenate (ISO)

sodium arsenite (ISO)

sulforaphane (ISO)

sunitinib (ISO)

tacedinaline (ISO)

tamoxifen (ISO)

thapsigargin (ISO)

titanium dioxide (ISO)

topotecan (EXP)

trichostatin A (ISO)

triphenyl phosphate (ISO)

triptonide (ISO)

tungsten (ISO)

uranium atom (ISO)

urethane (ISO)

valproic acid (ISO)

vinclozolin (EXP)

vincristine (ISO)

vorinostat (ISO)

zoledronic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

Ras protein signal transduction (IBA)

signal transduction (IEA)

small GTPase-mediated signal transduction (IEA)

Cellular Component

plasma membrane (IBA)

Molecular Function

guanyl-nucleotide exchange factor activity (IBA,IEA)

protein binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Rat ISS GO annotations from GOA human gene data--August 2006	GOA data from the GO Consortium
3.	GOA pipeline	RGD automated data pipeline
4.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
5.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Genomics

Comparative Map Data

Ralgdsl1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	13	67,184,402 - 67,454,019 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	13	67,184,402 - 67,454,019 (-)	Ensembl				GRCr8
mRatBN7.2	13	64,634,489 - 64,904,170 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	13	64,635,246 - 64,904,191 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	13	67,243,711 - 67,506,393 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	13	68,520,706 - 68,799,251 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	13	65,781,720 - 66,050,138 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Dahl_SR_JrHsd	13	66,534,347 - 66,797,027 (-)	NCBI		Dahl_SR_JrHsd
Lyon_Normotensive	13	66,748,721 - 67,011,399 (-)	NCBI		Lyon_Normotensive
Lyon_Hypertensive	13	66,684,957 - 66,947,651 (-)	NCBI		Lyon_Hypertensive
F344_StmMcwi	13	66,739,813 - 67,002,351 (-)	NCBI		F344_StmMcwi
Rnor_6.0	13	69,909,122 - 70,174,590 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	13	69,909,096 - 70,174,565 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	13	74,881,101 - 75,145,659 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	13	67,468,218 - 67,754,947 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	13	64,547,086 - 64,810,801 (-)	NCBI		Celera
RGSC_v3.1	13	67,483,775 - 67,596,194 (-)	NCBI
Cytogenetic Map	13	q21	NCBI

RGL1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	1	183,636,109 - 183,928,532 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	1	183,636,085 - 183,928,532 (+)	Ensembl			hg38	GRCh38
GRCh37	1	183,605,244 - 183,897,666 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	1	181,871,831 - 182,164,289 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	1	180,336,876 - 180,629,322	NCBI
Celera	1	156,716,240 - 157,008,586 (+)	NCBI		Celera
Cytogenetic Map	1	q25.3	NCBI
HuRef	1	154,841,067 - 155,133,408 (+)	NCBI		HuRef
CHM1_1	1	185,027,897 - 185,320,329 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	1	182,995,391 - 183,287,882 (+)	NCBI		T2T-CHM13v2.0

Rgl1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	1	152,392,513 - 152,642,056 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	1	152,392,511 - 152,642,102 (-)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	1	152,516,762 - 152,766,308 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	1	152,516,760 - 152,766,351 (-)	Ensembl			mm10	GRCm38
MGSCv37	1	154,364,660 - 154,472,241 (-)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	1	154,279,748 - 154,387,329 (-)	NCBI		MGSCv36	mm8
Celera	1	154,937,769 - 155,046,515 (-)	NCBI		Celera
Cytogenetic Map	1	G2- G3	NCBI
cM Map	1	64.85	NCBI

Rgl1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955406	22,483,336 - 22,670,537 (+)	Ensembl
ChiLan1.0	NW_004955406	22,419,137 - 22,670,537 (+)	NCBI	ChiLan1.0	ChiLan1.0

RGL1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	1	65,790,123 - 66,081,962 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	1	65,473,320 - 65,765,120 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	1	159,166,090 - 159,457,883 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	1	163,323,651 - 163,614,657 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	1	163,429,258 - 163,614,657 (+)	Ensembl			panPan2	panpan1.1

RGL1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	7	16,986,304 - 17,236,549 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	7	17,041,296 - 17,235,193 (+)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	7	16,571,833 - 16,821,876 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	7	16,718,212 - 16,968,704 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	7	16,718,185 - 16,968,890 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	7	16,626,490 - 16,876,720 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	7	16,735,857 - 16,985,375 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	7	16,866,935 - 17,116,349 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Rgl1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024409344	88,179,408 - 88,420,192 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936481	6,025,581 - 6,267,012 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936481	6,026,157 - 6,175,453 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

RGL1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	9	124,848,338 - 125,144,253 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	9	124,848,358 - 125,143,014 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	9	137,178,640 - 137,472,441 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

RGL1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	25	45,444,588 - 45,730,912 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	25	45,444,468 - 45,568,506 (-)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666055	46,660,856 - 46,947,508 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Rgl1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624814	9,746,210 - 9,950,327 (-)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624814	9,747,154 - 10,062,828 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Rgl1
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	10	31,971,460 - 32,220,470 (-)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Ralgdsl1
1252 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	410
Count of miRNA genes:	234
Interacting mature miRNAs:	287
Transcripts:	ENSRNOT00000067135
Prediction methods:	Microtar, Miranda, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1298066	Bp159	Blood pressure QTL 159		0.004	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	13	48639634	93639634	Rat
10755495	Bp387	Blood pressure QTL 387	3.78		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	13	37216241	90057603	Rat
1354655	Bp241	Blood pressure QTL 241	3.9		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	13	38975045	103588154	Rat
70220	Bp55	Blood pressure QTL 55	5.75		arterial blood pressure trait (VT:2000000)	blood pressure measurement (CMO:0000003)	13	39924693	84924693	Rat
71119	Thym2	Thymus enlargement QTL 2	3.8		thymus mass (VT:0004954)	thymus weight to body weight ratio (CMO:0000612)	13	48749814	87285480	Rat
61391	Bp5	Blood pressure QTL 5	5.6		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	13	24853925	69853925	Rat
4889861	Pur29	Proteinuria QTL 29	13.8	0.005	urine total protein amount (VT:0000032)	urine total protein excretion rate (CMO:0000756)	13	39968211	83286298	Rat
619615	Bp80	Blood pressure QTL 80		0.0354	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	13	7421791	87286911	Rat
61340	Bp25	Blood pressure QTL 25	4.2	0.004	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	13	37087983	82087983	Rat
1581573	Uae36	Urinary albumin excretion QTL 36			urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	13	6002008	88706694	Rat
1549897	Stresp12	Stress response QTL 12	3.35		stress-related behavior trait (VT:0010451)	number of approaches toward negative stimulus before onset of defensive burying response (CMO:0001960)	13	40983585	85983585	Rat
724564	Uae11	Urinary albumin excretion QTL 11	5.7		urine albumin amount (VT:0002871)	urine albumin level (CMO:0000130)	13	47354258	94285672	Rat
738027	Lnnr6	Liver neoplastic nodule remodeling QTL 6	3.3		liver integrity trait (VT:0010547)	liver remodeling tumorous lesion number (CMO:0001461)	13	65613454	109350286	Rat
7207885	Glom27	Glomerulus QTL 27	3.9		kidney glomerulus integrity trait (VT:0010546)	kidney crescentic glomeruli count to kidney normal glomeruli count ratio (CMO:0002139)	13	21120177	109350286	Rat
738026	Lnnr5	Liver neoplastic nodule remodeling QTL 5	3.29		liver integrity trait (VT:0010547)	liver remodeling tumorous lesion number (CMO:0001461)	13	62424592	88113509	Rat
1558644	Cm45	Cardiac mass QTL 45	3.6	0.002	heart mass (VT:0007028)	heart wet weight (CMO:0000069)	13	26244808	71244808	Rat
70181	BpQTLcluster11	Blood pressure QTL cluster 11	6.922		arterial blood pressure trait (VT:2000000)	absolute change in mean arterial blood pressure (CMO:0000533)	13	33794096	78794096	Rat
61349	Bp31	Blood pressure QTL 31	5.75		arterial blood pressure trait (VT:2000000)	blood pressure measurement (CMO:0000003)	13	39924693	84924693	Rat
1576318	Schws5	Schwannoma susceptibility QTL 5		0.0351	nervous system integrity trait (VT:0010566)	post-insult time to trigeminal nerve neurilemmoma formation (CMO:0002019)	13	64497900	109350286	Rat
2303563	Bw89	Body weight QTL 89	6		body mass (VT:0001259)	body weight (CMO:0000012)	13	34834947	79834947	Rat
1354621	Rf47	Renal function QTL 47	3.7		kidney renin amount (VT:0010559)	kidney renin level (CMO:0002166)	13	11081740	103588154	Rat
1581554	Pur11	Proteinuria QTL 11			urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	13	6002008	88706694	Rat
12879477	Bp401	Blood pressure QTL 401			arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	13	39814726	84814726	Rat
1331750	Bp220	Blood pressure QTL 220	2.98		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	13	39968211	84968211	Rat
6893338	Cm76	Cardiac mass QTL 76	0	0.99	heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	13	26244808	71244808	Rat
12879475	Bp400	Blood pressure QTL 400			arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	13	64375743	109350286	Rat
11530006	Niddm72	Non-insulin dependent diabetes mellitus QTL 72		0.001	blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	13	38286298	83286298	Rat
1354666	Bp244	Blood pressure QTL 244	4.9		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	13	1	103588154	Rat

Markers in Region

D13Rat29

Rat Assembly	Chr	Position (strand)	Source	JBrowse
GRCr8	13	67,451,461 - 67,451,625 (+)	Marker Load Pipeline
mRatBN7.2	13	64,901,586 - 64,901,750 (+)	MAPPER	mRatBN7.2
Rnor_6.0	13	70,172,055 - 70,172,216	NCBI	Rnor6.0
Rnor_5.0	13	75,143,142 - 75,143,303	UniSTS	Rnor5.0
RGSC_v3.4	13	67,752,436 - 67,752,598	RGD	RGSC3.4
RGSC_v3.4	13	67,752,437 - 67,752,598	UniSTS	RGSC3.4
RGSC_v3.1	13	67,766,517 - 67,766,678	RGD
RH 3.4 Map	13	325.3	RGD
RH 3.4 Map	13	325.3	UniSTS
RH 2.0 Map	13	402.1	RGD
SHRSP x BN Map	13	23.8399	RGD
FHH x ACI Map	13	24.86	RGD
Cytogenetic Map	13	q21	UniSTS

D13Got43

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	13	64,854,771 - 64,854,979 (+)	MAPPER	mRatBN7.2
Rnor_6.0	13	70,125,198 - 70,125,405	NCBI	Rnor6.0
Rnor_5.0	13	75,096,895 - 75,097,102	UniSTS	Rnor5.0
RGSC_v3.4	13	67,704,936 - 67,705,144	RGD	RGSC3.4
RGSC_v3.4	13	67,704,937 - 67,705,144	UniSTS	RGSC3.4
Celera	13	64,761,456 - 64,761,663	UniSTS
RGSC_v3.1	13	67,719,017 - 67,719,224	RGD
RH 3.4 Map	13	308.8	UniSTS
RH 3.4 Map	13	308.8	RGD
RH 2.0 Map	13	402.6	RGD
Cytogenetic Map	13	q21	UniSTS

RH134836

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	13	64,682,355 - 64,682,560 (+)	MAPPER	mRatBN7.2
Rnor_6.0	13	69,956,975 - 69,957,179	NCBI	Rnor6.0
Rnor_5.0	13	74,928,966 - 74,929,170	UniSTS	Rnor5.0
RGSC_v3.4	13	67,515,321 - 67,515,525	UniSTS	RGSC3.4
Celera	13	64,594,185 - 64,594,389	UniSTS
RH 3.4 Map	13	214.8	UniSTS
Cytogenetic Map	13	q21	UniSTS

AI169212

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	13	64,634,546 - 64,634,659 (+)	MAPPER	mRatBN7.2
Rnor_6.0	13	69,909,168 - 69,909,280	NCBI	Rnor6.0
Rnor_5.0	13	74,881,159 - 74,881,271	UniSTS	Rnor5.0
RGSC_v3.4	13	67,467,512 - 67,467,624	UniSTS	RGSC3.4
Celera	13	64,546,380 - 64,546,492	UniSTS
RH 3.4 Map	13	308.9	UniSTS
Cytogenetic Map	13	q21	UniSTS

AU048853

Rat Assembly	Chr	Position (strand)	Source	JBrowse
GRCr8	13	67,194,912 - 67,195,169 (+)	Marker Load Pipeline
mRatBN7.2	13	64,645,014 - 64,645,272 (+)	MAPPER	mRatBN7.2
Rnor_6.0	13	69,919,636 - 69,919,893	NCBI	Rnor6.0
Rnor_5.0	13	74,891,627 - 74,891,884	UniSTS	Rnor5.0
RGSC_v3.4	13	67,477,980 - 67,478,237	UniSTS	RGSC3.4
Celera	13	64,556,862 - 64,557,119	UniSTS
Cytogenetic Map	13	q21	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	164	91	90	59	92	59	6	356	192	11	143	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001105957	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006249982	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008769609	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008769610	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017598701	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039090443	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063272095	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063272096	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	CH473958	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000013	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000067135 ⟹ ENSRNOP00000063014

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	13	67,184,402 - 67,454,019 (-)	Ensembl
mRatBN7.2 Ensembl	13	64,635,253 - 64,904,099 (-)	Ensembl
Rnor_6.0 Ensembl	13	69,909,874 - 70,174,565 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000083995 ⟹ ENSRNOP00000069394

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	13	67,184,402 - 67,296,123 (-)	Ensembl
mRatBN7.2 Ensembl	13	64,635,246 - 64,746,177 (-)	Ensembl
Rnor_6.0 Ensembl	13	69,909,096 - 69,984,785 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000098745 ⟹ ENSRNOP00000092177

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	13	67,184,402 - 67,453,794 (-)	Ensembl
mRatBN7.2 Ensembl	13	64,635,253 - 64,904,191 (-)	Ensembl

RefSeq Acc Id:

NM_001105957 ⟹ NP_001099427

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	13	67,184,402 - 67,454,019 (-)	NCBI
mRatBN7.2	13	64,634,503 - 64,904,144 (-)	NCBI
Dahl_SR_JrHsd	13	66,534,347 - 66,797,027 (-)	NCBI
Lyon_Normotensive	13	66,748,721 - 67,011,399 (-)	NCBI
Lyon_Hypertensive	13	66,684,957 - 66,947,651 (-)	NCBI
F344_StmMcwi	13	66,739,813 - 67,002,351 (-)	NCBI
Rnor_6.0	13	69,909,874 - 70,174,565 (-)	NCBI
Rnor_5.0	13	74,881,101 - 75,145,659 (-)	NCBI
RGSC_v3.4	13	67,468,218 - 67,754,947 (-)	RGD
Celera	13	64,547,086 - 64,810,801 (-)	RGD

Sequence:

show sequence

GTGCTGCCGCCGTCGGTGCCAGCCGCTTGTTGTTGGGGTCCGGTGTGAAGTGTGGGTGGTCGGA
CTTAAGCGTGGGGTGGGATGGACTGGCTGCAGAACCTAGTCCCCTGCAGTCAGCGGGAGAATGA
GGCGGAGTGATGCCCAGCACGAAACTAGTGATCGGAGCCCTCCATTCGGACCGAGCGCCGCCGG
GGGCTGCGTTCCAGAGCTGAGAGCCCCTTCCGGGGCTTGGGATCTTGGCACGCTGTCGGTGGGA
GGTCCCCAAGGACGGAGTCGAAAGGTCACTTCTTACCTGTCAGTGCTGGGGGACAGCATCGCGG
CCGGACCTGCAGAATCTCAACTCGCAGATTCGTAATGCCTCCTGCTTACCTCTTTCAAGATGGA
GGAGAAATCTGTGGGAGAACCTACTCAAGTGGTGTCTAAAGTCAAACTTTCCACAAAAGTAGAA
AACCCAGGACACTGGCTGGTGGATGATCACGCTCGAATATGGGAAGTTTTAAAGACAGAGGAGA
GCTCGATTCAGGACTGGGGTGAAGAGGTAGAGGAAGGAGCTGTTTACCATGTCACCCTCAAAAG
AGTCCAGATTCAACAGGCGGCCAATAAAGGAGCAAGATGGCTAGGGGTTGAAGGGGACCAGCTG
CCTCCAGGACACACAGTCAGTCAGTATGAGACCTGTAAGATCAGGACCATCAAAGCTGGCACAC
TGGAGAAGCTTGTGGAGAACGTATGGAAACTTGACAGGCCCACATTGGGAAGACGATGGAAGCC
AAAGTTCACCTGAGTCTAAGGCCGTGATCCGGAACGCCATTGCTTCCATCCTGAGGGCGTGGCT
TGACCAGTGTGCGGAAGACTTCCGGGAGCCCCCTCACTTCCCCTGCCTGCAGAAGCTGCTGGAG
TATCTCAAACAGATGATGCCTGGCTCCGACCCAGAGAGGAGAGCACAAAACCTTCTTGAACAGT
TTCAAAAGCAGGATGTGGATTCTGACAATGGACTTCTCAACACCATCTCCTTCAGCCCGGAAGA
GGAAGAGGAACTGGAGAGTGGAGGGTCAGCAGAACTCACGACCTTCTCAGAAGACCTCGTGGCA
GAGCAGCTGACCTACATGGACGCACAACTGTTCAAGAAGGTCGTACCGCACCACTGCCTGGGCT
GCGTTTGGTCTCGGCGGGATAGAAAGGAAAACAAGCATTTGGCCCCTACCATCCGGGCCACCAT
CTCTCAGTTCAACGCCCTCACCAAGTGTGTGGTCAGCACCATCCTGGGGAGCAAGGACCTCAAA
ACCCAGCAGCGAGCCAGAGTCATCGAGAAGTGGATCAACATTGCTCACGAATGTAGAATCCTGA
AGAATTTTTCCTCCTTGAGGGCCATCGTTTCCGCTCTACAGTCTAATTCCATCTATCGGTTGAA
AAAGGCATGGGCTGCCGTCCCCAAGGACAGAATGCTGATGTTTGAAGAACTTTCAGAGATCTTC
TCTGATCATAACAACCATCTCACCAGCCGGGAACTTCTCATGAAGGAAGGAACCTCAAAATTTG
CAAACCTGGACAGCAGTGTGAAAGAAAACCAGAAGCGGACCCAGAGGCGCCTGCAGCTGCAGAA
GGATATGGGTGTGATGCAGGGCACCGTGCCTTACCTGGGCACCTTCCTGACTGACCTGACCATG
CTGGACACTGCCCTGCAGGACTACATTGAGGGTGGACTGATCAACTTCGAGAAAAGAAGAAGGG
AATTTGAGGTGATTGCCCAGATAAAGCTCCTACAGTCTGCTTGCAACAGCTACTGCATGAGCCC
AGACCAGAAGTTCATCCAGTGGTTCCAGAGGCAGCAGCTTCTAACAGAGGAGGAGAGCTATGCC
CTCTCCTGTGAGATCGAAGCCGCTGCTGACGCCAGCACCACTTCCCCTAAGCCTCGGAAGAGCA
TGGTGAAGAGACTGAGCCTACTGTTTCTGGGGTCTGACCTCATCCCCGGGAGCACCCCCACCAA
AGAGCAGCCCAAGTCCACAGCCAGTGGGAGCTCTGGGGAGAGTATGGACTCAGTCAGCGTGTCA
TCCTGTGAGTCAAACCACTCAGAGGCCGAGGAGGGCTCCGCCACACCCATGGACACACCAGATG
AGCCTCAGAAGAAGCTCTCTGAGTCCTCCTCCTCCTGCTCCTCCATCCATTCCATGGACACGAA
TTCCTCAGGGATGTCGTCCCTCATCAACCCGCTGTCCTCTCCTCCAGCCTGCAACAACAACCCT
AAAATGCACAAGCGCTCCGTCTCCGTGACGTCCATTACCTCCACAGTGCTGCCTCCTGTTTACA
ATCAGCAGAATGAAGACACCTGCATCATCCGCATCAGCGTAGAGGACAACAACGGCAACATGTA
CAAGAGCATCATGTTGACGAGCCAAGATAAGACCCCCGCTGTGATCCAGAGAGCGATGTCAAAG
CACAATCTGGAGTCGGACCCAGCCGAGGAGTATGAACTGGTACAAGTCATCTCGGAGGACAAAG
AGCTGGTGATCCCAGACTCTGCAAATGTCTTTTATGCCATGAATAGCCAAGTGAACTTTGATTT
CATTTTACGCAAAAAGAGCTCGGTGGAGGAGCAGGTGAAGATGCGCAGTCGGACCAGCCTGACG
ATGCCCAGGACAGCTAAGCGGGGCTGCTGGAGTAACAGACACAGCAAGGTCACCCTCTGAAGGG
ACAGGGCGAAGCTGAGCACAGCCGTGGTGATGCCAACCACCCAGGGTTGAGGATCATTGCTGAA
AGCGCCAGATACTTATGGAGCTCAGCTGTGTAGAGAGCACTGCGTGGGGAGAGTGGAAGTGAAT
TTAACATCAAAAGGATAAATGGTTCACTGACGCTCTCAGGCCTGAGAGTGAATACAAAATGGTT
CATATTTTAAAATATATATATATACACACACATATCGTGTGTGTGTGTGTGTGTGCGTGCGCGT
GCGTGCGTGCGTGCGTGTGCGTGCGTGCGCGTGCGTGCGTGTGCGTGTGTGCGTGCGTGTGTGT
GTGTGTGTGTGTGTGTGTGGATATACCAGAGGGACTATACAGGATATTTTGGACTATGGAAAAA
CCAATTTGCACAATGGCCTGGGAAGTTGAGGTCACTTTTTACAGGGAAACAGAAGGGACTGAGC
ACCTGATCTCACACCTTCCAAGTAAATAGAATCAGACCTGCCAATACCAAGTGTTCTTCATGCC
AGTATTACAAGCCCAAGCTCTGATTTTGTAAAGGGACGAGAGGATTACTTTCTCAGTCACGTGC
CACCAGATGACCAAACTGCAGAGGTTGGAGTGGCCACAGGCTGCATGAAAGGCCACCATGGAAA
GGTTCGGATGAGTCAGTGGTCTCTGCCCTCTGCTGGCGTCTGCTGGAGCTTCAGAGGCCTGCGT
GCCTTGCTGGTCCCCATAACAATGCTCCAGGGGTCAACACACGCTTGTTTCAATTCCTGGAAAC
CCTGTTGTGTTTCTGCCTTCTCTCCTAAAGAACATACCACAGTCATTACCGCATAAGTAGCCTC
CGTCTTCTGTGACATTTCAGCCAGAGAAGAAAGCGCAGAAGAACAGCGGCTCCTCTGGACTCTT
CTCCGTCTTGGACCACTCGGCCGCCCTCTGATGGCCCTTTGCATGTAAAAGCGTAGTCTGGTCT
TTTGCCATCTGGAACCCCGTACCCCTCTCTTATGTGCAATCCGTTCCTCAGGTGTAGACATTTC
TACTGCAGTTGGCTACATGCAATCATTCCGAGCCTGTAAAAGATTATGGGAACAATAGTGCTCT
TCCTTTCTCCCCCCACACTTGCTCTCCCAGCCACACTGGTAGGTGATGGGTTTTGTTTGTAGTA
ATCACAGCACCATACTCGTGCTTCCGGTCTGAGCTATGCTGGGATCTGGATGAAAAAGCCATAT
GTGACGGAGCTGACATGTATAAGAAGCACTTTCAAATTATTGTCCCTTTTTAATTTTTTCTCCA
AATGCCAGTTTTTATTCCAAAAATAAAGAGAATCAACCCAGAATATG

hide sequence

RefSeq Acc Id:

XM_006249982 ⟹ XP_006250044

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	13	67,184,402 - 67,296,145 (-)	NCBI
mRatBN7.2	13	64,634,489 - 64,746,244 (-)	NCBI
Rnor_6.0	13	69,909,122 - 70,019,925 (-)	NCBI
Rnor_5.0	13	74,881,101 - 75,145,659 (-)	NCBI

Sequence:

show sequence

ATCACACAAGAGTCCCTCACCCTGATTTCCCCCAGTTTCCTTTAGTGAAGCAGGGGAGGCTGCG
CACACAAGTCCCATGGCACACATGGTTCTATTTTGGCACCTGGTGGCCACCAGGAAACCCTGTT
GAAGCGGTCTACTTGAAAGCATCGTTTCCCCACCACTCCGAAGCTGGAGCAACGATTGCTTGCT
CCCTTGATCCGCGGGGCTTCCGAAAGGGAGAGTGCGCTCGCAAGCACAAACAGGAAAGCCTGAC
ATCACGGAGCGGCGGGGAGGAGTCTGCTGCCGCGGGCTCCCGGGCTGCCTGCTCGCTGGCCGGC
GCTCCTTTGTGGCCGAGTCGCGCGCGGCGGCGGTGGTGGGCAGCAGGACGCGTGGGAAGCGTGG
GGACCCGAAGCCGGGCCAGAGAGACGCCCGGGCCGCCTCGGAGCAGGGCGCACCATGCAGCGTC
CGTGTGCCGGAGAGAAAACTGAGAATGAAATTACTTTGGCAAGCTAAAATGAGCTCGATTCAGG
ACTGGGGTGAAGAGGTAGAGGAAGGAGCTGTTTACCATGTCACCCTCAAAAGAGTCCAGATTCA
ACAGGCGGCCAATAAAGGAGCAAGATGGCTAGGGGTTGAAGGGGACCAGCTGCCTCCAGGACAC
ACAGTCAGTCAGTATGAGACCTGTAAGATCAGGACCATCAAAGCTGGCACACTGGAGAAGCTTG
TGGAGAACCTGCTGACAGCTTTTGGGGACAACGACTTTACCTACATCAGCATCTTCTTGTCAAC
ATATAGAGGCTTTGCCTCGACCAAGGAAGTTCTGGAGTTGCTACTGGACAGGTATGGAAACTTG
ACAGGCCCACATTGGGAAGACGATGGAAGCCAAAGTTCACCTGAGTCTAAGGCCGTGATCCGGA
ACGCCATTGCTTCCATCCTGAGGGCGTGGCTTGACCAGTGTGCGGAAGACTTCCGGGAGCCCCC
TCACTTCCCCTGCCTGCAGAAGCTGCTGGAGTATCTCAAACAGATGATGCCTGGCTCCGACCCA
GAGAGGAGAGCACAAAACCTTCTTGAACAGTTTCAAAAGCAGGATGTGGATTCTGACAATGGAC
TTCTCAACACCATCTCCTTCAGCCCGGAAGAGGAAGAGGAACTGGAGAGTGGAGGGTCAGCAGA
ACTCACGACCTTCTCAGAAGACCTCGTGGCAGAGCAGCTGACCTACATGGACGCACAACTGTTC
AAGAAGGTCGTACCGCACCACTGCCTGGGCTGCGTTTGGTCTCGGCGGGATAGAAAGGAAAACA
AGCATTTGGCCCCTACCATCCGGGCCACCATCTCTCAGTTCAACGCCCTCACCAAGTGTGTGGT
CAGCACCATCCTGGGGAGCAAGGACCTCAAAACCCAGCAGCGAGCCAGAGTCATCGAGAAGTGG
ATCAACATTGCTCACGAATGTAGAATCCTGAAGAATTTTTCCTCCTTGAGGGCCATCGTTTCCG
CTCTACAGTCTAATTCCATCTATCGGTTGAAAAAGGCATGGGCTGCCGTCCCCAAGGACAGAAT
GCTGATGTTTGAAGAACTTTCAGAGATCTTCTCTGATCATAACAACCATCTCACCAGCCGGGAA
CTTCTCATGAAGGAAGGAACCTCAAAATTTGCAAACCTGGACAGCAGTGTGAAAGAAAACCAGA
AGCGGACCCAGAGGCGCCTGCAGCTGCAGAAGGATATGGGTGTGATGCAGGGCACCGTGCCTTA
CCTGGGCACCTTCCTGACTGACCTGACCATGCTGGACACTGCCCTGCAGGACTACATTGAGGGT
GGACTGATCAACTTCGAGAAAAGAAGAAGGGAATTTGAGGTGATTGCCCAGATAAAGCTCCTAC
AGTCTGCTTGCAACAGCTACTGCATGAGCCCAGACCAGAAGTTCATCCAGTGGTTCCAGAGGCA
GCAGCTTCTAACAGAGGAGGAGAGCTATGCCCTCTCCTGTGAGATCGAAGCCGCTGCTGACGCC
AGCACCACTTCCCCTAAGCCTCGGAAGAGCATGGTGAAGAGACTGAGCCTACTGTTTCTGGGGT
CTGACCTCATCCCCGGGAGCACCCCCACCAAAGAGCAGCCCAAGTCCACAGCCAGTGGGAGCTC
TGGGGAGAGTATGGACTCAGTCAGCGTGTCATCCTGTGAGTCAAACCACTCAGAGGCCGAGGAG
GGCTCCGCCACACCCATGGACACACCAGATGAGCCTCAGAAGAAGCTCTCTGAGTCCTCCTCCT
CCTGCTCCTCCATCCATTCCATGGACACGAATTCCTCAGGGATGTCGTCCCTCATCAACCCGCT
GTCCTCTCCTCCAGCCTGCAACAACAACCCTAAAATGCACAAGCGCTCCGTCTCCGTGACGTCC
ATTACCTCCACAGTGCTGCCTCCTGTTTACAATCAGCAGAATGAAGACACCTGCATCATCCGCA
TCAGCGTAGAGGACAACAACGGCAACATGTACAAGAGCATCATGTTGACGAGCCAAGATAAGAC
CCCCGCTGTGATCCAGAGAGCGATGTCAAAGCACAATCTGGAGTCGGACCCAGCCGAGGAGTAT
GAACTGGTACAAGTCATCTCGGAGGACAAAGAGCTGGTGATCCCAGACTCTGCAAATGTCTTTT
ATGCCATGAATAGCCAAGTGAACTTTGATTTCATTTTACGCAAAAAGAGCTCGGTGGAGGAGCA
GGTGAAGATGCGCAGTCGGACCAGCCTGACGATGCCCAGGACAGCTAAGCGGGGCTGCTGGAGT
AACAGACACAGCAAGGTCACCCTCTGAAGGGACAGGGCGAAGCTGAGCACAGCCGTGGTGATGC
CAACCACCCAGGGTTGAGGATCATTGCTGAAAGCGCCAGATACTTATGGAGCTCAGCTGTGTAG
AGAGCACTGCGTGGGGAGAGTGGAAGTGAATTTAACATCAAAAGGATAAATGGTTCACTGACGC
TCTCAGGCCTGAGAGTGAATACAAAATGGTTCATATTTTAAAATATATATATATACACACACAT
ATCGTGTGTGTGTGTGTGTGTGCGTGCGCGTGCGTGCGTGCGTGCGTGCGTGCGTGTGTGTGTG
TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGATATACCAGAGGGACTATACAGGATATTTTGGA
CTATGGAAAAACCAATTTGCACAATGGCCTGGGAAGTTGAGGTCACTTTTTACAGGGAAACAGA
AGGGACTGAGCACCTGATCTCACACCTTCCAAGTAAATAGAATCAGACCTGCCAATACCAAGTG
TTCTTCATGCCAGTATTACAAGCCCAAGCTCTGATTTTGTAAAGGGACGAGAGGATTACTTTCT
CAGTCACGTGCCACCAGATGACCAAACTGCAGAGGTTGGAGTGGCCACAGGCTGCATGAAAGGC
CACCATGGAAAGGTTCGGATGAGTCAGTGGTCTCTGCCCTCTGCTGGCGTCTGCTGGAGCTTCA
GAGGCCTGCGTGCCTTGCTGGTCCCCATAACAATGCTCCAGGGGTCAACACACGCTTGTTTCAA
TTCCTGGAAACCCTGTTGTGTTTCTGCCTTCTCTCCTAAAGAACATACCACAGTCATTACCGCA
TAAGTAGCCTCCGTCTTCTGTGACATTTCAGCCAGAGAAGAAAGCGCAGAAGAACAGCGGCTCC
TCTGGACTCTTCTCCGTCTTGGACCACTCGGCCGCCCTCTGATGGCCCTTTGCATGTAAAAGCG
TAGTCTGGTCTTTTGCCATCTGGAACCCCGTACCCCTCTCTTATGTGCAATCCGTTCCTCAGGT
GTAGACATTTCTACTGCAGTTGGCTACATGCAATCATTCCGAGCCTGTAAAAGATTTCTGAGCA
GCGGCCTCTCTGTTAATGACCCCTCAGAAAATGTCCCCGTTGACTAATGGTGGCTAATTTCCAC
CTTCACTTTTGTAGCATCCTGTGCTCCAGTCACAGGGAGAGAAAGGGGACTGCGGTGCTGTCTC
CGCCCTTTCTCAGAGAGGCGCACCCGTGTAGATGGGAACAATAGTGCTCTTCCTTTCTCCCCCC
ACACTTGCTCTCCCAGCCACACTGGTAGGTGATGGGTTTTGTTTGTAGTAATCACAGCACCATA
CTCGTGCTTCCGGTCTGAGCTATGCTGGGATCTGGATGAAAAAGCCATATGTGACGGAGCTGAC
ATGTATAAGAAGCACTTTCAAATTATTGTCCCTTTTTAATTTTTTCTCCAAATGCCAGTTTTTA
TTCCAAAAATAAAGAGAATCAACCCAGAATATGATGTCCAGATTGTAACAGGGAGTTTCTTTTC
TAACCCTGTACTATAGCTCCCCAAGATGATGTAGGGGTTGTGTTCTGTAAATAGCTGTATGAAC
TCAACAAGAAACACCGGGAAAAGCTCAGATGCGTGGCAGTGGACCAAAGCGAGGGCCAGGAAGT
CATGATTCCCTTGTCTTGCACATTCTGACACCAGATGGACCCTGGTGTTTCTCGGAGACTGGCC
TGGAGCGTGGAGACCAGCTAGCTTTCAGCTGGTCATCAGAAGGCACCTTCTGTTGTTTGTGAGC
CTTCTTTGGTTAGTGCTTCTGAGCACAGAGGGGAAATGGCAAGGACTGCAGCCATCAGGAAGCT
GAGGTAAACCTAGCCTCAGCCTGGCTTTCTCAGTGTCAGGGAATCAGTGCAGAGCTACTGCCCT
GGTTTGGGTGTGACTCACAAGACATACGTGTTATGACCATGTGCTCACCCTGTGTAATTATACT
GTATATGTAGAGCCTAGATTTATATACTGCAATGTAAAAAAAAAAATATATATATATATATATA
TATTTACCTTTTTACAAAAAGACAATGGAAATCCCAAGTGGGGTAAAACATGGCCTCCTTTATT
TAATGCCACTTCAGTTGTTTTAATTTTGCTTCTGGGTAAACAGCTGGGTTTTGTTTCCAGCTGC
TCGCACGCTTGTCCTTGTGCATCTCCAGCATCTGTTTACCTTTTGGTTAAACTAATAAACCGGT
TTGGGACTTGGTTGACA

hide sequence

RefSeq Acc Id:

XM_008769610 ⟹ XP_008767832

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	13	67,184,402 - 67,453,875 (-)	NCBI
mRatBN7.2	13	64,634,489 - 64,904,167 (-)	NCBI
Rnor_6.0	13	69,909,122 - 70,174,590 (-)	NCBI

Sequence:

show sequence

GGGCACTTGGGGCGCGTGGCCTGGAGTGCTGCCGCCGTCGGTGCCAGCCGCTTGTTGTTGGGGT
CCGGTGTGAAGTGTGGGTGGTCGGACTTAAGCGTGGGGTGGGATGGACTGGCTGCAGAACCTAG
TCCCCTGCAGTCAGCGGGAGAATGAGGCGGAGTGATGCCCAGCACGAAACTAGTGATCGGAGCC
CTCCATTCGGACCGAGCGCCGCCGGGGGCTGCGTTCCAGAGCTGAGAGCCCCTTCCGGGGCTTG
GGATCTTGGCACGCTGTCGGTGGGAGGTCCCCAAGGACGGAGTCGAAAGGTCACTTCTTACCTG
TCAGTGCTGGGGGACAGCATCGCGGCCGGACCTGCAGAATCTCAACTCGCAGATTCGTAATGCC
TCCTGCTTACCTCTTTCAAGATGGAGGAGAAATCTGTGGGAGAACCTACTCAAGTGGTGTCTAA
AGTCAAACTTTCCACAAAAGTAGAAAACCCAGGACACTGGCTGGTGGATGATCACGCTCGAATA
TGGGAAGTTTTAAAGACAGAGGAGGTTGAAGGGGACCAGCTGCCTCCAGGACACACAGTCAGTC
AGTATGAGACCTGTAAGATCAGGACCATCAAAGCTGGCACACTGGAGAAGCTTGTGGAGAACCT
GCTGACAGCTTTTGGGGACAACGACTTTACCTACATCAGCATCTTCTTGTCAACATATAGAGGC
TTTGCCTCGACCAAGGAAGTTCTGGAGTTGCTACTGGACAGGTATGGAAACTTGACAGGCCCAC
ATTGGGAAGACGATGGAAGCCAAAGTTCACCTGAGTCTAAGGCCGTGATCCGGAACGCCATTGC
TTCCATCCTGAGGGCGTGGCTTGACCAGTGTGCGGAAGACTTCCGGGAGCCCCCTCACTTCCCC
TGCCTGCAGAAGCTGCTGGAGTATCTCAAACAGATGATGCCTGGCTCCGACCCAGAGAGGAGAG
CACAAAACCTTCTTGAACAGTTTCAAAAGCAGGATGTGGATTCTGACAATGGACTTCTCAACAC
CATCTCCTTCAGCCCGGAAGAGGAAGAGGAACTGGAGAGTGGAGGGTCAGCAGAACTCACGACC
TTCTCAGAAGACCTCGTGGCAGAGCAGCTGACCTACATGGACGCACAACTGTTCAAGAAGGTCG
TACCGCACCACTGCCTGGGCTGCGTTTGGTCTCGGCGGGATAGAAAGGAAAACAAGCATTTGGC
CCCTACCATCCGGGCCACCATCTCTCAGTTCAACGCCCTCACCAAGTGTGTGGTCAGCACCATC
CTGGGGAGCAAGGACCTCAAAACCCAGCAGCGAGCCAGAGTCATCGAGAAGTGGATCAACATTG
CTCACGAATGTAGAATCCTGAAGAATTTTTCCTCCTTGAGGGCCATCGTTTCCGCTCTACAGTC
TAATTCCATCTATCGGTTGAAAAAGGCATGGGCTGCCGTCCCCAAGGACAGAATGCTGATGTTT
GAAGAACTTTCAGAGATCTTCTCTGATCATAACAACCATCTCACCAGCCGGGAACTTCTCATGA
AGGAAGGAACCTCAAAATTTGCAAACCTGGACAGCAGTGTGAAAGAAAACCAGAAGCGGACCCA
GAGGCGCCTGCAGCTGCAGAAGGATATGGGTGTGATGCAGGGCACCGTGCCTTACCTGGGCACC
TTCCTGACTGACCTGACCATGCTGGACACTGCCCTGCAGGACTACATTGAGGGTGGACTGATCA
ACTTCGAGAAAAGAAGAAGGGAATTTGAGGTGATTGCCCAGATAAAGCTCCTACAGTCTGCTTG
CAACAGCTACTGCATGAGCCCAGACCAGAAGTTCATCCAGTGGTTCCAGAGGCAGCAGCTTCTA
ACAGAGGAGGAGAGCTATGCCCTCTCCTGTGAGATCGAAGCCGCTGCTGACGCCAGCACCACTT
CCCCTAAGCCTCGGAAGAGCATGGTGAAGAGACTGAGCCTACTGTTTCTGGGGTCTGACCTCAT
CCCCGGGAGCACCCCCACCAAAGAGCAGCCCAAGTCCACAGCCAGTGGGAGCTCTGGGGAGAGT
ATGGACTCAGTCAGCGTGTCATCCTGTGAGTCAAACCACTCAGAGGCCGAGGAGGGCTCCGCCA
CACCCATGGACACACCAGATGAGCCTCAGAAGAAGCTCTCTGAGTCCTCCTCCTCCTGCTCCTC
CATCCATTCCATGGACACGAATTCCTCAGGGATGTCGTCCCTCATCAACCCGCTGTCCTCTCCT
CCAGCCTGCAACAACAACCCTAAAATGCACAAGCGCTCCGTCTCCGTGACGTCCATTACCTCCA
CAGTGCTGCCTCCTGTTTACAATCAGCAGAATGAAGACACCTGCATCATCCGCATCAGCGTAGA
GGACAACAACGGCAACATGTACAAGAGCATCATGTTGACGAGCCAAGATAAGACCCCCGCTGTG
ATCCAGAGAGCGATGTCAAAGCACAATCTGGAGTCGGACCCAGCCGAGGAGTATGAACTGGTAC
AAGTCATCTCGGAGGACAAAGAGCTGGTGATCCCAGACTCTGCAAATGTCTTTTATGCCATGAA
TAGCCAAGTGAACTTTGATTTCATTTTACGCAAAAAGAGCTCGGTGGAGGAGCAGGTGAAGATG
CGCAGTCGGACCAGCCTGACGATGCCCAGGACAGCTAAGCGGGGCTGCTGGAGTAACAGACACA
GCAAGGTCACCCTCTGAAGGGACAGGGCGAAGCTGAGCACAGCCGTGGTGATGCCAACCACCCA
GGGTTGAGGATCATTGCTGAAAGCGCCAGATACTTATGGAGCTCAGCTGTGTAGAGAGCACTGC
GTGGGGAGAGTGGAAGTGAATTTAACATCAAAAGGATAAATGGTTCACTGACGCTCTCAGGCCT
GAGAGTGAATACAAAATGGTTCATATTTTAAAATATATATATATACACACACATATCGTGTGTG
TGTGTGTGTGTGCGTGCGCGTGCGTGCGTGCGTGCGTGCGTGCGTGTGTGTGTGTGTGTGTGTG
TGTGTGTGTGTGTGTGTGTGGATATACCAGAGGGACTATACAGGATATTTTGGACTATGGAAAA
ACCAATTTGCACAATGGCCTGGGAAGTTGAGGTCACTTTTTACAGGGAAACAGAAGGGACTGAG
CACCTGATCTCACACCTTCCAAGTAAATAGAATCAGACCTGCCAATACCAAGTGTTCTTCATGC
CAGTATTACAAGCCCAAGCTCTGATTTTGTAAAGGGACGAGAGGATTACTTTCTCAGTCACGTG
CCACCAGATGACCAAACTGCAGAGGTTGGAGTGGCCACAGGCTGCATGAAAGGCCACCATGGAA
AGGTTCGGATGAGTCAGTGGTCTCTGCCCTCTGCTGGCGTCTGCTGGAGCTTCAGAGGCCTGCG
TGCCTTGCTGGTCCCCATAACAATGCTCCAGGGGTCAACACACGCTTGTTTCAATTCCTGGAAA
CCCTGTTGTGTTTCTGCCTTCTCTCCTAAAGAACATACCACAGTCATTACCGCATAAGTAGCCT
CCGTCTTCTGTGACATTTCAGCCAGAGAAGAAAGCGCAGAAGAACAGCGGCTCCTCTGGACTCT
TCTCCGTCTTGGACCACTCGGCCGCCCTCTGATGGCCCTTTGCATGTAAAAGCGTAGTCTGGTC
TTTTGCCATCTGGAACCCCGTACCCCTCTCTTATGTGCAATCCGTTCCTCAGGTGTAGACATTT
CTACTGCAGTTGGCTACATGCAATCATTCCGAGCCTGTAAAAGATTTCTGAGCAGCGGCCTCTC
TGTTAATGACCCCTCAGAAAATGTCCCCGTTGACTAATGGTGGCTAATTTCCACCTTCACTTTT
GTAGCATCCTGTGCTCCAGTCACAGGGAGAGAAAGGGGACTGCGGTGCTGTCTCCGCCCTTTCT
CAGAGAGGCGCACCCGTGTAGATGGGAACAATAGTGCTCTTCCTTTCTCCCCCCACACTTGCTC
TCCCAGCCACACTGGTAGGTGATGGGTTTTGTTTGTAGTAATCACAGCACCATACTCGTGCTTC
CGGTCTGAGCTATGCTGGGATCTGGATGAAAAAGCCATATGTGACGGAGCTGACATGTATAAGA
AGCACTTTCAAATTATTGTCCCTTTTTAATTTTTTCTCCAAATGCCAGTTTTTATTCCAAAAAT
AAAGAGAATCAACCCAGAATATGATGTCCAGATTGTAACAGGGAGTTTCTTTTCTAACCCTGTA
CTATAGCTCCCCAAGATGATGTAGGGGTTGTGTTCTGTAAATAGCTGTATGAACTCAACAAGAA
ACACCGGGAAAAGCTCAGATGCGTGGCAGTGGACCAAAGCGAGGGCCAGGAAGTCATGATTCCC
TTGTCTTGCACATTCTGACACCAGATGGACCCTGGTGTTTCTCGGAGACTGGCCTGGAGCGTGG
AGACCAGCTAGCTTTCAGCTGGTCATCAGAAGGCACCTTCTGTTGTTTGTGAGCCTTCTTTGGT
TAGTGCTTCTGAGCACAGAGGGGAAATGGCAAGGACTGCAGCCATCAGGAAGCTGAGGTAAACC
TAGCCTCAGCCTGGCTTTCTCAGTGTCAGGGAATCAGTGCAGAGCTACTGCCCTGGTTTGGGTG
TGACTCACAAGACATACGTGTTATGACCATGTGCTCACCCTGTGTAATTATACTGTATATGTAG
AGCCTAGATTTATATACTGCAATGTAAAAAAAAAAATATATATATATATATATATATTTACCTT
TTTACAAAAAGACAATGGAAATCCCAAGTGGGGTAAAACATGGCCTCCTTTATTTAATGCCACT
TCAGTTGTTTTAATTTTGCTTCTGGGTAAACAGCTGGGTTTTGTTTCCAGCTGCTCGCACGCTT
GTCCTTGTGCATCTCCAGCATCTGTTTACCTTTTGGTTAAACTAATAAACCGGTTTGGGACTTG
GTTGACA

hide sequence

RefSeq Acc Id:

XM_017598701 ⟹ XP_017454190

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	13	67,184,402 - 67,453,875 (-)	NCBI
mRatBN7.2	13	64,634,489 - 64,904,167 (-)	NCBI
Rnor_6.0	13	69,909,122 - 70,174,590 (-)	NCBI

Sequence:

show sequence

GGGCACTTGGGGCGCGTGGCCTGGAGTGCTGCCGCCGTCGGTGCCAGCCGCTTGTTGTTGGGGT
CCGGTGTGAAGTGTGGGTGGTCGGACTTAAGCGTGGGGTGGGATGGACTGGCTGCAGAACCTAG
TCCCCTGCAGTCAGCGGGAGAATGAGGCGGAGTGATGCCCAGCACGAAACTAGTGATCGGAGCC
CTCCATTCGGACCGAGCGCCGCCGGGGGCTGCGTTCCAGAGCTGAGAGCCCCTTCCGGGGCTTG
GGATCTTGGCACGCTGTCGGTGGGAGGTCCCCAAGGACGGAGTCGAAAGGTCACTTCTTACCTG
TCAGTGCTGGGGGACAGCATCGCGGCCGGACCTGCAGAATCTCAACTCGATTCGTAATGCCTCC
TGCTTACCTCTTTCAAGATGGAGGAGAAATCTGTGGGAGAACCTACTCAAGTGGTGTCTAAAGT
CAAACTTTCCACAAAAGTAGAAAACCCAGGACACTGGCTGGTGGATGATCACGCTCGAATATGG
GAAGTTTTAAAGACAGAGGAGAGCTCGATTCAGGACTGGGGTGAAGAGGTAGAGGAAGGAGCTG
TTTACCATGTCACCCTCAAAAGAGTCCAGATTCAACAGGCGGCCAATAAAGGAGCAAGATGGCT
AGGGGTTGAAGGGGACCAGCTGCCTCCAGGACACACAGTCAGTCAGTATGAGACCTGTAAGATC
AGGACCATCAAAGCTGGCACACTGGAGAAGCTTGTGGAGAACCTGCTGACAGCTTTTGGGGACA
ACGACTTTACCTACATCAGCATCTTCTTGTCAACATATAGAGGCTTTGCCTCGACCAAGGAAGT
TCTGGAGTTGCTACTGGACAGGTATGGAAACTTGACAGGCCCACATTGGGAAGACGATGGAAGC
CAAAGTTCACCTGAGTCTAAGGCCGTGATCCGGAACGCCATTGCTTCCATCCTGAGGGCGTGGC
TTGACCAGTGTGCGGAAGACTTCCGGGAGCCCCCTCACTTCCCCTGCCTGCAGAAGCTGCTGGA
GTATCTCAAACAGATGATGCCTGGCTCCGACCCAGAGAGGAGAGCACAAAACCTTCTTGAACAG
TTTCAAAAGCAGGATGTGGATTCTGACAATGGACTTCTCAACACCATCTCCTTCAGCCCGGAAG
AGGAAGAGGAACTGGAGAGTGGAGGGTCAGCAGAACTCACGACCTTCTCAGAAGACCTCGTGGC
AGAGCAGCTGACCTACATGGACGCACAACTGTTCAAGAAGGTCGTACCGCACCACTGCCTGGGC
TGCGTTTGGTCTCGGCGGGATAGAAAGGAAAACAAGCATTTGGCCCCTACCATCCGGGCCACCA
TCTCTCAGTTCAACGCCCTCACCAAGTGTGTGGTCAGCACCATCCTGGGGAGCAAGGACCTCAA
AACCCAGCAGCGAGCCAGAGTCATCGAGAAGTGGATCAACATTGCTCACGAATGTAGAATCCTG
AAGAATTTTTCCTCCTTGAGGGCCATCGTTTCCGCTCTACAGTCTAATTCCATCTATCGGTTGA
AAAAGGCATGGGCTGCCGTCCCCAAGGACAGAATGCTGATGTTTGAAGAACTTTCAGAGATCTT
CTCTGATCATAACAACCATCTCACCAGCCGGGAACTTCTCATGAAGGAAGGAACCTCAAAATTT
GCAAACCTGGACAGCAGTGTGAAAGAAAACCAGAAGCGGACCCAGAGGCGCCTGCAGCTGCAGA
AGGATATGGGTGTGATGCAGGGCACCGTGCCTTACCTGGGCACCTTCCTGACTGACCTGACCAT
GCTGGACACTGCCCTGCAGGACTACATTGAGGGTGGACTGATCAACTTCGAGAAAAGAAGAAGG
GAATTTGAGGTGATTGCCCAGATAAAGCTCCTACAGTCTGCTTGCAACAGCTACTGCATGAGCC
CAGACCAGAAGTTCATCCAGTGGTTCCAGAGGCAGCAGCTTCTAACAGAGGAGGAGAGCTATGC
CCTCTCCTGTGAGATCGAAGCCGCTGCTGACGCCAGCACCACTTCCCCTAAGCCTCGGAAGAGC
ATGGTGAAGAGACTGAGCCTACTGTTTCTGGGGTCTGACCTCATCCCCGGGAGCACCCCCACCA
AAGAGCAGCCCAAGTCCACAGCCAGTGGGAGCTCTGGGGAGAGTATGGACTCAGTCAGCGTGTC
ATCCTGTGAGTCAAACCACTCAGAGGCCGAGGAGGGCTCCGCCACACCCATGGACACACCAGAT
GAGCCTCAGAAGAAGCTCTCTGAGTCCTCCTCCTCCTGCTCCTCCATCCATTCCATGGACACGA
ATTCCTCAGGGATGTCGTCCCTCATCAACCCGCTGTCCTCTCCTCCAGCCTGCAACAACAACCC
TAAAATGCACAAGCGCTCCGTCTCCGTGACGTCCATTACCTCCACAGTGCTGCCTCCTGTTTAC
AATCAGCAGAATGAAGACACCTGCATCATCCGCATCAGCGTAGAGGACAACAACGGCAACATGT
ACAAGAGCATCATGTTGACGAGCCAAGATAAGACCCCCGCTGTGATCCAGAGAGCGATGTCAAA
GCACAATCTGGAGTCGGACCCAGCCGAGGAGTATGAACTGGTACAAGTCATCTCGGAGGACAAA
GAGCTGGTGATCCCAGACTCTGCAAATGTCTTTTATGCCATGAATAGCCAAGTGAACTTTGATT
TCATTTTACGCAAAAAGAGCTCGGTGGAGGAGCAGGTGAAGATGCGCAGTCGGACCAGCCTGAC
GATGCCCAGGACAGCTAAGCGGGGCTGCTGGAGTAACAGACACAGCAAGGTCACCCTCTGAAGG
GACAGGGCGAAGCTGAGCACAGCCGTGGTGATGCCAACCACCCAGGGTTGAGGATCATTGCTGA
AAGCGCCAGATACTTATGGAGCTCAGCTGTGTAGAGAGCACTGCGTGGGGAGAGTGGAAGTGAA
TTTAACATCAAAAGGATAAATGGTTCACTGACGCTCTCAGGCCTGAGAGTGAATACAAAATGGT
TCATATTTTAAAATATATATATATACACACACATATCGTGTGTGTGTGTGTGTGTGCGTGCGCG
TGCGTGCGTGCGTGCGTGCGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
GATATACCAGAGGGACTATACAGGATATTTTGGACTATGGAAAAACCAATTTGCACAATGGCCT
GGGAAGTTGAGGTCACTTTTTACAGGGAAACAGAAGGGACTGAGCACCTGATCTCACACCTTCC
AAGTAAATAGAATCAGACCTGCCAATACCAAGTGTTCTTCATGCCAGTATTACAAGCCCAAGCT
CTGATTTTGTAAAGGGACGAGAGGATTACTTTCTCAGTCACGTGCCACCAGATGACCAAACTGC
AGAGGTTGGAGTGGCCACAGGCTGCATGAAAGGCCACCATGGAAAGGTTCGGATGAGTCAGTGG
TCTCTGCCCTCTGCTGGCGTCTGCTGGAGCTTCAGAGGCCTGCGTGCCTTGCTGGTCCCCATAA
CAATGCTCCAGGGGTCAACACACGCTTGTTTCAATTCCTGGAAACCCTGTTGTGTTTCTGCCTT
CTCTCCTAAAGAACATACCACAGTCATTACCGCATAAGTAGCCTCCGTCTTCTGTGACATTTCA
GCCAGAGAAGAAAGCGCAGAAGAACAGCGGCTCCTCTGGACTCTTCTCCGTCTTGGACCACTCG
GCCGCCCTCTGATGGCCCTTTGCATGTAAAAGCGTAGTCTGGTCTTTTGCCATCTGGAACCCCG
TACCCCTCTCTTATGTGCAATCCGTTCCTCAGGTGTAGACATTTCTACTGCAGTTGGCTACATG
CAATCATTCCGAGCCTGTAAAAGATTTCTGAGCAGCGGCCTCTCTGTTAATGACCCCTCAGAAA
ATGTCCCCGTTGACTAATGGTGGCTAATTTCCACCTTCACTTTTGTAGCATCCTGTGCTCCAGT
CACAGGGAGAGAAAGGGGACTGCGGTGCTGTCTCCGCCCTTTCTCAGAGAGGCGCACCCGTGTA
GATGGGAACAATAGTGCTCTTCCTTTCTCCCCCCACACTTGCTCTCCCAGCCACACTGGTAGGT
GATGGGTTTTGTTTGTAGTAATCACAGCACCATACTCGTGCTTCCGGTCTGAGCTATGCTGGGA
TCTGGATGAAAAAGCCATATGTGACGGAGCTGACATGTATAAGAAGCACTTTCAAATTATTGTC
CCTTTTTAATTTTTTCTCCAAATGCCAGTTTTTATTCCAAAAATAAAGAGAATCAACCCAGAAT
ATGATGTCCAGATTGTAACAGGGAGTTTCTTTTCTAACCCTGTACTATAGCTCCCCAAGATGAT
GTAGGGGTTGTGTTCTGTAAATAGCTGTATGAACTCAACAAGAAACACCGGGAAAAGCTCAGAT
GCGTGGCAGTGGACCAAAGCGAGGGCCAGGAAGTCATGATTCCCTTGTCTTGCACATTCTGACA
CCAGATGGACCCTGGTGTTTCTCGGAGACTGGCCTGGAGCGTGGAGACCAGCTAGCTTTCAGCT
GGTCATCAGAAGGCACCTTCTGTTGTTTGTGAGCCTTCTTTGGTTAGTGCTTCTGAGCACAGAG
GGGAAATGGCAAGGACTGCAGCCATCAGGAAGCTGAGGTAAACCTAGCCTCAGCCTGGCTTTCT
CAGTGTCAGGGAATCAGTGCAGAGCTACTGCCCTGGTTTGGGTGTGACTCACAAGACATACGTG
TTATGACCATGTGCTCACCCTGTGTAATTATACTGTATATGTAGAGCCTAGATTTATATACTGC
AATGTAAAAAAAAAAATATATATATATATATATATATTTACCTTTTTACAAAAAGACAATGGAA
ATCCCAAGTGGGGTAAAACATGGCCTCCTTTATTTAATGCCACTTCAGTTGTTTTAATTTTGCT
TCTGGGTAAACAGCTGGGTTTTGTTTCCAGCTGCTCGCACGCTTGTCCTTGTGCATCTCCAGCA
TCTGTTTACCTTTTGGTTAAACTAATAAACCGGTTTGGGACTTGGTTGACA

hide sequence

RefSeq Acc Id:

XM_039090443 ⟹ XP_038946371

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	13	67,188,894 - 67,453,875 (-)	NCBI
mRatBN7.2	13	64,638,996 - 64,904,170 (-)	NCBI

RefSeq Acc Id:

XM_063272095 ⟹ XP_063128165

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	13	67,184,402 - 67,453,875 (-)	NCBI

RefSeq Acc Id:

XM_063272096 ⟹ XP_063128166

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	13	67,188,895 - 67,296,200 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_001099427	(Get FASTA)	NCBI Sequence Viewer
	XP_006250044	(Get FASTA)	NCBI Sequence Viewer
	XP_008767832	(Get FASTA)	NCBI Sequence Viewer
	XP_017454190	(Get FASTA)	NCBI Sequence Viewer
	XP_038946371	(Get FASTA)	NCBI Sequence Viewer
	XP_063128165	(Get FASTA)	NCBI Sequence Viewer
	XP_063128166	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDM09558	(Get FASTA)	NCBI Sequence Viewer
	EDM09559	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000063014
	ENSRNOP00000063014.2
	ENSRNOP00000069394
	ENSRNOP00000069394.3
	ENSRNOP00000092177
	ENSRNOP00000092177.1

RefSeq Acc Id:

NP_001099427 ⟸ NM_001105957

- UniProtKB:

D3ZS31 (UniProtKB/TrEMBL), A6ICT7 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MRPVRSGPSKLAHWRSLWRTYGNLTGPHWEDDGSQSSPESKAVIRNAIASILRAWLDQCAEDFR
EPPHFPCLQKLLEYLKQMMPGSDPERRAQNLLEQFQKQDVDSDNGLLNTISFSPEEEEELESGG
SAELTTFSEDLVAEQLTYMDAQLFKKVVPHHCLGCVWSRRDRKENKHLAPTIRATISQFNALTK
CVVSTILGSKDLKTQQRARVIEKWINIAHECRILKNFSSLRAIVSALQSNSIYRLKKAWAAVPK
DRMLMFEELSEIFSDHNNHLTSRELLMKEGTSKFANLDSSVKENQKRTQRRLQLQKDMGVMQGT
VPYLGTFLTDLTMLDTALQDYIEGGLINFEKRRREFEVIAQIKLLQSACNSYCMSPDQKFIQWF
QRQQLLTEEESYALSCEIEAAADASTTSPKPRKSMVKRLSLLFLGSDLIPGSTPTKEQPKSTAS
GSSGESMDSVSVSSCESNHSEAEEGSATPMDTPDEPQKKLSESSSSCSSIHSMDTNSSGMSSLI
NPLSSPPACNNNPKMHKRSVSVTSITSTVLPPVYNQQNEDTCIIRISVEDNNGNMYKSIMLTSQ
DKTPAVIQRAMSKHNLESDPAEEYELVQVISEDKELVIPDSANVFYAMNSQVNFDFILRKKSSV
EEQVKMRSRTSLTMPRTAKRGCWSNRHSKVTL

hide sequence

RefSeq Acc Id:	XP_006250044 ⟸ XM_006249982
- Peptide Label:	isoform X2
- UniProtKB:	A6ICT6 (UniProtKB/TrEMBL), A6ICT7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MKLLWQAKMSSIQDWGEEVEEGAVYHVTLKRVQIQQAANKGARWLGVEGDQLPPGHTVSQYETC KIRTIKAGTLEKLVENLLTAFGDNDFTYISIFLSTYRGFASTKEVLELLLDRYGNLTGPHWEDD GSQSSPESKAVIRNAIASILRAWLDQCAEDFREPPHFPCLQKLLEYLKQMMPGSDPERRAQNLL EQFQKQDVDSDNGLLNTISFSPEEEEELESGGSAELTTFSEDLVAEQLTYMDAQLFKKVVPHHC LGCVWSRRDRKENKHLAPTIRATISQFNALTKCVVSTILGSKDLKTQQRARVIEKWINIAHECR ILKNFSSLRAIVSALQSNSIYRLKKAWAAVPKDRMLMFEELSEIFSDHNNHLTSRELLMKEGTS KFANLDSSVKENQKRTQRRLQLQKDMGVMQGTVPYLGTFLTDLTMLDTALQDYIEGGLINFEKR RREFEVIAQIKLLQSACNSYCMSPDQKFIQWFQRQQLLTEEESYALSCEIEAAADASTTSPKPR KSMVKRLSLLFLGSDLIPGSTPTKEQPKSTASGSSGESMDSVSVSSCESNHSEAEEGSATPMDT PDEPQKKLSESSSSCSSIHSMDTNSSGMSSLINPLSSPPACNNNPKMHKRSVSVTSITSTVLPP VYNQQNEDTCIIRISVEDNNGNMYKSIMLTSQDKTPAVIQRAMSKHNLESDPAEEYELVQVISE DKELVIPDSANVFYAMNSQVNFDFILRKKSSVEEQVKMRSRTSLTMPRTAKRGCWSNRHSKVTL hide sequence

RefSeq Acc Id:	XP_008767832 ⟸ XM_008769610
- Peptide Label:	isoform X3
- UniProtKB:	A0A8I6AGN1 (UniProtKB/TrEMBL), A6ICT7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MEEKSVGEPTQVVSKVKLSTKVENPGHWLVDDHARIWEVLKTEEVEGDQLPPGHTVSQYETCKI RTIKAGTLEKLVENLLTAFGDNDFTYISIFLSTYRGFASTKEVLELLLDRYGNLTGPHWEDDGS QSSPESKAVIRNAIASILRAWLDQCAEDFREPPHFPCLQKLLEYLKQMMPGSDPERRAQNLLEQ FQKQDVDSDNGLLNTISFSPEEEEELESGGSAELTTFSEDLVAEQLTYMDAQLFKKVVPHHCLG CVWSRRDRKENKHLAPTIRATISQFNALTKCVVSTILGSKDLKTQQRARVIEKWINIAHECRIL KNFSSLRAIVSALQSNSIYRLKKAWAAVPKDRMLMFEELSEIFSDHNNHLTSRELLMKEGTSKF ANLDSSVKENQKRTQRRLQLQKDMGVMQGTVPYLGTFLTDLTMLDTALQDYIEGGLINFEKRRR EFEVIAQIKLLQSACNSYCMSPDQKFIQWFQRQQLLTEEESYALSCEIEAAADASTTSPKPRKS MVKRLSLLFLGSDLIPGSTPTKEQPKSTASGSSGESMDSVSVSSCESNHSEAEEGSATPMDTPD EPQKKLSESSSSCSSIHSMDTNSSGMSSLINPLSSPPACNNNPKMHKRSVSVTSITSTVLPPVY NQQNEDTCIIRISVEDNNGNMYKSIMLTSQDKTPAVIQRAMSKHNLESDPAEEYELVQVISEDK ELVIPDSANVFYAMNSQVNFDFILRKKSSVEEQVKMRSRTSLTMPRTAKRGCWSNRHSKVTL hide sequence

RefSeq Acc Id:	XP_017454190 ⟸ XM_017598701
- Peptide Label:	isoform X1
- UniProtKB:	D3ZS31 (UniProtKB/TrEMBL), A6ICT7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MEEKSVGEPTQVVSKVKLSTKVENPGHWLVDDHARIWEVLKTEESSIQDWGEEVEEGAVYHVTL KRVQIQQAANKGARWLGVEGDQLPPGHTVSQYETCKIRTIKAGTLEKLVENLLTAFGDNDFTYI SIFLSTYRGFASTKEVLELLLDRYGNLTGPHWEDDGSQSSPESKAVIRNAIASILRAWLDQCAE DFREPPHFPCLQKLLEYLKQMMPGSDPERRAQNLLEQFQKQDVDSDNGLLNTISFSPEEEEELE SGGSAELTTFSEDLVAEQLTYMDAQLFKKVVPHHCLGCVWSRRDRKENKHLAPTIRATISQFNA LTKCVVSTILGSKDLKTQQRARVIEKWINIAHECRILKNFSSLRAIVSALQSNSIYRLKKAWAA VPKDRMLMFEELSEIFSDHNNHLTSRELLMKEGTSKFANLDSSVKENQKRTQRRLQLQKDMGVM QGTVPYLGTFLTDLTMLDTALQDYIEGGLINFEKRRREFEVIAQIKLLQSACNSYCMSPDQKFI QWFQRQQLLTEEESYALSCEIEAAADASTTSPKPRKSMVKRLSLLFLGSDLIPGSTPTKEQPKS TASGSSGESMDSVSVSSCESNHSEAEEGSATPMDTPDEPQKKLSESSSSCSSIHSMDTNSSGMS SLINPLSSPPACNNNPKMHKRSVSVTSITSTVLPPVYNQQNEDTCIIRISVEDNNGNMYKSIML TSQDKTPAVIQRAMSKHNLESDPAEEYELVQVISEDKELVIPDSANVFYAMNSQVNFDFILRKK SSVEEQVKMRSRTSLTMPRTAKRGCWSNRHSKVTL hide sequence

Ensembl Acc Id:

ENSRNOP00000063014 ⟸ ENSRNOT00000067135

Ensembl Acc Id:

ENSRNOP00000069394 ⟸ ENSRNOT00000083995

RefSeq Acc Id:	XP_038946371 ⟸ XM_039090443
- Peptide Label:	isoform X4

Ensembl Acc Id:

ENSRNOP00000092177 ⟸ ENSRNOT00000098745

RefSeq Acc Id:	XP_063128165 ⟸ XM_063272095
- Peptide Label:	isoform X3
- UniProtKB:	A0A8I6AGN1 (UniProtKB/TrEMBL), A6ICT7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063128166 ⟸ XM_063272096
- Peptide Label:	isoform X5
- UniProtKB:	A0A0G2JV91 (UniProtKB/TrEMBL)

Protein Domains

N-terminal Ras-GEF Ras-associating Ras-GEF

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-A0A0G2JV91-F1-model_v2	AlphaFold	A0A0G2JV91	1-785	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1308947	AgrOrtholog
BioCyc Gene	G2FUF-17906	BioCyc
Ensembl Genes	ENSRNOG00000002347	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000067135	ENTREZGENE
	ENSRNOT00000067135.3	UniProtKB/TrEMBL
	ENSRNOT00000083995	ENTREZGENE
	ENSRNOT00000083995.3	UniProtKB/TrEMBL
	ENSRNOT00000098745	ENTREZGENE
	ENSRNOT00000098745.2	UniProtKB/TrEMBL
Gene3D-CATH	1.10.840.10	UniProtKB/TrEMBL
	Phosphatidylinositol 3-kinase Catalytic Subunit, Chain A, domain 1	UniProtKB/TrEMBL
	Son of sevenless (SoS) protein Chain: S domain 1	UniProtKB/TrEMBL
InterPro	Ras-assoc	UniProtKB/TrEMBL
	Ras-like_GEF	UniProtKB/TrEMBL
	Ras-like_Gua-exchang_fac_N	UniProtKB/TrEMBL
	Ras_G-nucl-exch_fac_CS	UniProtKB/TrEMBL
	Ras_GEF_dom	UniProtKB/TrEMBL
	RASGEF_cat_dom_sf	UniProtKB/TrEMBL
	RasGRF_CDC25	UniProtKB/TrEMBL
	RGL1	UniProtKB/TrEMBL
	Ubiquitin-rel_dom	UniProtKB/TrEMBL
KEGG Report	rno:289080	UniProtKB/TrEMBL
NCBI Gene	289080	ENTREZGENE
PANTHER	PTHR23113	UniProtKB/TrEMBL
	PTHR23113:SF199	UniProtKB/TrEMBL
Pfam	PF00788	UniProtKB/TrEMBL
	RasGEF	UniProtKB/TrEMBL
	RasGEF_N	UniProtKB/TrEMBL
PhenoGen	Ralgdsl1	PhenoGen
PROSITE	PS50200	UniProtKB/TrEMBL
	RASGEF	UniProtKB/TrEMBL
	RASGEF_CAT	UniProtKB/TrEMBL
	RASGEF_NTER	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000002347	RatGTEx
SMART	RasGEF	UniProtKB/TrEMBL
	RasGEFN	UniProtKB/TrEMBL
	SM00314	UniProtKB/TrEMBL
Superfamily-SCOP	Ras_GEF	UniProtKB/TrEMBL
	SSF54236	UniProtKB/TrEMBL
UniProt	A0A0G2JV91	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6AGN1	ENTREZGENE, UniProtKB/TrEMBL
	A6ICT6	ENTREZGENE, UniProtKB/TrEMBL
	A6ICT7	ENTREZGENE, UniProtKB/TrEMBL
	D3ZS31	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2023-05-26	Ralgdsl1	ral guanine nucleotide dissociation stimulator like 1	Rgl1	ral guanine nucleotide dissociation stimulator like 1	Symbol changed	629549	APPROVED
2023-01-16	Rgl1	ral guanine nucleotide dissociation stimulator like 1	Rgl1	ral guanine nucleotide dissociation stimulator,-like 1	Name changed	629549	APPROVED
2008-04-30	Rgl1	ral guanine nucleotide dissociation stimulator,-like 1	Rgl1_predicted	ral guanine nucleotide dissociation stimulator,-like 1 (predicted)	'predicted' is removed	2292626	APPROVED
2005-01-12	Rgl1_predicted	ral guanine nucleotide dissociation stimulator,-like 1 (predicted)			Symbol and Name status set to approved	70820	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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