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Gene: Fam110a (family with sequence similarity 110, member A) Rattus norvegicus

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Symbol:

Fam110a

Name:

family with sequence similarity 110, member A

RGD ID:

1308904

Description:

Predicted to be involved in mitotic spindle organization. Predicted to be located in several cellular components, including cell cortex; cytosol; and microtubule cytoskeleton. Orthologous to human FAM110A (family with sequence similarity 110 member A); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 6-propyl-2-thiouracil; acetamide.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

hypothetical protein LOC311535; LOC311535; RGD1308904; serine threonine rich protein; similar to RIKEN cDNA 5430432M24; uncharacterized protein LOC311535

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	3	160,934,815 - 160,945,405 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	3	160,931,777 - 160,949,897 (-)	Ensembl				GRCr8
mRatBN7.2	3	140,474,484 - 140,485,074 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	3	140,474,249 - 140,485,093 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	3	144,378,978 - 144,389,568 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	3	152,962,789 - 152,973,379 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	3	150,704,522 - 150,715,211 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	3	147,476,580 - 147,487,170 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	3	147,476,580 - 147,487,170 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	3	153,826,434 - 153,837,025 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	3	142,326,013 - 142,328,572 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	3	139,229,369 - 139,239,525 (-)	NCBI		Celera
RGSC_v3.1	3	142,231,585 - 142,234,145 (-)	NCBI
Cytogenetic Map	3	q41	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dimethylhydrazine (ISO)

17alpha-ethynylestradiol (ISO)

17beta-estradiol (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2-acetamidofluorene (ISO)

4,4'-sulfonyldiphenol (ISO)

6-propyl-2-thiouracil (EXP)

acetamide (EXP)

acrylamide (EXP,ISO)

aflatoxin B1 (ISO)

amitrole (EXP)

aristolochic acid A (ISO)

arsane (ISO)

arsenic atom (ISO)

benzo[a]pyrene (ISO)

bisphenol A (EXP)

butan-1-ol (ISO)

cadmium dichloride (ISO)

calcitriol (ISO)

carbamazepine (ISO)

carbon nanotube (ISO)

chromium(6+) (ISO)

clofibrate (ISO)

copper(II) sulfate (ISO)

dibenzo[a,l]pyrene (ISO)

Dibutyl phosphate (ISO)

dibutyl phthalate (ISO)

endosulfan (EXP)

FR900359 (ISO)

gallic acid (ISO)

leflunomide (ISO)

manganese atom (ISO)

manganese(0) (ISO)

manganese(II) chloride (ISO)

methamphetamine (EXP)

methyl methanesulfonate (ISO)

N-nitrosodiethylamine (ISO)

naled (ISO)

okadaic acid (ISO)

paracetamol (EXP,ISO)

propanal (ISO)

sodium arsenite (ISO)

sulfadimethoxine (EXP)

sunitinib (ISO)

tamoxifen (ISO)

titanium dioxide (ISO)

tunicamycin (ISO)

valproic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

mitotic spindle organization (ISO)

Cellular Component

cell cortex (ISO)

centrosome (ISO)

cytosol (ISO)

nucleus (ISO)

spindle microtubule (ISO)

spindle pole (ISO)

Molecular Function

protein binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
2.	Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences.	Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11.

Genomics

Comparative Map Data

Fam110a
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	3	160,934,815 - 160,945,405 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	3	160,931,777 - 160,949,897 (-)	Ensembl				GRCr8
mRatBN7.2	3	140,474,484 - 140,485,074 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	3	140,474,249 - 140,485,093 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	3	144,378,978 - 144,389,568 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	3	152,962,789 - 152,973,379 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	3	150,704,522 - 150,715,211 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	3	147,476,580 - 147,487,170 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	3	147,476,580 - 147,487,170 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	3	153,826,434 - 153,837,025 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	3	142,326,013 - 142,328,572 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	3	139,229,369 - 139,239,525 (-)	NCBI		Celera
RGSC_v3.1	3	142,231,585 - 142,234,145 (-)	NCBI
Cytogenetic Map	3	q41	NCBI

FAM110A
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	20	833,715 - 846,277 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	20	833,715 - 857,463 (+)	Ensembl			hg38	GRCh38
GRCh37	20	814,358 - 826,920 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	20	762,356 - 774,922 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	20	764,710 - 774,922	NCBI
Celera	20	910,641 - 923,209 (+)	NCBI		Celera
Cytogenetic Map	20	p13	NCBI
HuRef	20	766,717 - 779,273 (+)	NCBI		HuRef
CHM1_1	20	814,415 - 826,973 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	20	880,828 - 893,378 (+)	NCBI		T2T-CHM13v2.0

Fam110a
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	2	151,811,318 - 151,822,096 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	2	151,811,318 - 151,822,139 (-)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	2	151,969,396 - 151,980,219 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	2	151,969,398 - 151,980,219 (-)	Ensembl			mm10	GRCm38
MGSCv37	2	151,795,134 - 151,805,955 (-)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	2	151,660,839 - 151,671,570 (-)	NCBI		MGSCv36	mm8
Celera	2	157,785,102 - 157,795,923 (-)	NCBI		Celera
Cytogenetic Map	2	G3	NCBI
cM Map	2	74.83	NCBI

Fam110a
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955596	57,478 - 82,729 (+)	Ensembl
ChiLan1.0	NW_004955596	72,369 - 82,314 (+)	NCBI	ChiLan1.0	ChiLan1.0

FAM110A
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	21	1,742,498 - 2,074,079 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	20	1,794,542 - 2,070,907 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	20	901,992 - 1,194,243 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	20	784,262 - 789,163 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2

LOC102152990
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	24	20,162,146 - 20,198,057 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
Dog10K_Boxer_Tasha	24	19,814,975 - 19,885,054 (-)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	24	20,852,872 - 20,923,644 (-)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
UMICH_Zoey_3.1	24	20,128,883 - 20,198,907 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	24	20,234,606 - 20,304,648 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	24	20,665,431 - 20,735,717 (-)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Fam110a
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024408640	169,181,996 - 169,321,866 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936485	17,741,017 - 17,753,118 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936485	17,740,963 - 17,753,214 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

FAM110A
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	17	34,425,617 - 34,437,721 (-)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	17	34,425,618 - 34,437,729 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	17	39,050,573 - 39,062,536 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

FAM110A
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	2	55,679,012 - 55,692,782 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	2	55,679,588 - 55,680,475 (-)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666078	8,264,775 - 8,278,550 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Fam110a
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624741	2,066,973 - 2,078,152 (-)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624741	2,066,973 - 2,078,143 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Fam110a
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	5	131,334,018 - 131,344,884 (-)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Fam110a
100 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	82
Count of miRNA genes:	75
Interacting mature miRNAs:	78
Transcripts:	ENSRNOT00000074295
Prediction methods:	Miranda, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
12879876	Bw182	Body weight QTL 182		0.003	body mass (VT:0001259)	body weight (CMO:0000012)	3	141555229	186555229	Rat
2301411	Bp320	Blood pressure QTL 320		0.001	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	3	141555229	186555229	Rat
1582233	Insul10	Insulin level QTL 10	5.4	0.0015	blood insulin amount (VT:0001560)	serum insulin level times blood glucose level (CMO:0002040)	3	133259579	178259579	Rat
12879872	Cm97	Cardiac mass QTL 97		0.001	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	3	141555229	186555229	Rat
12879873	Cm96	Cardiac mass QTL 96		0.001	heart mass (VT:0007028)	heart wet weight to body weight ratio (CMO:0002408)	3	141555229	186555229	Rat
1578653	Vnigr3	Vascular neointimal growth QTL 3	3.1		artery morphology trait (VT:0002191)	artery neointimal hyperplastic lesion area (CMO:0001414)	3	151075912	189428310	Rat
2302373	Gluco39	Glucose level QTL 39	5.01		blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	3	129154923	182114333	Rat
12879874	Cm98	Cardiac mass QTL 98		0.005	heart right ventricle mass (VT:0007033)	heart right ventricle weight to body weight ratio (CMO:0000914)	3	141555229	186555229	Rat
12879875	Kidm64	Kidney mass QTL 64		0.001	kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	3	141555229	186555229	Rat
70216	Cm14	Cardiac mass QTL 14	2.1		heart mass (VT:0007028)	heart wet weight (CMO:0000069)	3	51581665	184004958	Rat
2292591	Esta4	Estrogen-induced thymic atrophy QTL 4			thymus mass (VT:0004954)	thymus wet weight (CMO:0000855)	3	67641776	167835660	Rat
1578754	Stresp16	Stress response QTL 16	4	0.001	blood renin amount (VT:0003349)	plasma renin activity level (CMO:0000116)	3	133134628	178134628	Rat
1582213	Insul6	Insulin level QTL 6	3.7	0.0009	blood insulin amount (VT:0001560)	calculated serum insulin level (CMO:0000359)	3	155759447	189428310	Rat
1300173	Rf11	Renal function QTL 11	3.38		renal blood flow trait (VT:2000006)	absolute change in renal blood flow rate (CMO:0001168)	3	141508991	166376254	Rat
9589106	Insul23	Insulin level QTL 23	13.86	0.001	blood insulin amount (VT:0001560)	plasma insulin level (CMO:0000342)	3	152055202	189428310	Rat
10755461	Coatc16	Coat color QTL 16			coat/hair pigmentation trait (VT:0010463)	pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)	3	142898802	187898802	Rat
8662816	Vetf4	Vascular elastic tissue fragility QTL 4	4		renal artery integrity trait (VT:0010642)	number of ruptures of the internal elastic lamina of the renal arteries (CMO:0002563)	3	79649560	177741895	Rat
1559282	Emca5	Estrogen-induced mammary cancer QTL 5	3.9		mammary gland integrity trait (VT:0010552)	percentage of study population developing mammary tumors during a period of time (CMO:0000948)	3	145335553	189428310	Rat
1354611	Despr2	Despair related QTL 2	3.03	0.0028	locomotor behavior trait (VT:0001392)	amount of time spent in voluntary immobility (CMO:0001043)	3	117537367	162537367	Rat
2303620	Vencon4	Ventilatory control QTL 4	3.9		respiration trait (VT:0001943)	tidal volume (CMO:0000222)	3	125116475	170116475	Rat
1582256	Insul9	Insulin level QTL 9	4.4	0.0016	blood insulin amount (VT:0001560)	absolute change in serum insulin level (CMO:0002038)	3	155759447	189428310	Rat
1576306	Schws3	Schwannoma susceptibility QTL 3		0.001	nervous system integrity trait (VT:0010566)	percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017)	3	139299381	184299381	Rat
5686842	Rf59	Renal function QTL 59			urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	3	122395989	167395989	Rat
1300159	Kidm4	Kidney mass QTL 4	3.83		kidney mass (VT:0002707)	right kidney wet weight to body weight ratio (CMO:0001953)	3	141508991	177728348	Rat
2301971	Cm71	Cardiac mass QTL 71	4.63		heart left ventricle mass (VT:0007031)	heart left ventricle weight (CMO:0000776)	3	131036586	176036586	Rat
631673	Iddm13	Insulin dependent diabetes mellitus QTL 13	1.3	0.663	blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	3	137114333	182114333	Rat
1582248	Insul7	Insulin level QTL 7	3.9	0.0041	blood insulin amount (VT:0001560)	calculated serum insulin level (CMO:0000359)	3	155759447	189428310	Rat
2301970	Bw81	Body weight QTL 81	5.19		body mass (VT:0001259)	body weight (CMO:0000012)	3	131036586	176036586	Rat
1581546	Pur13	Proteinuria QTL 13	2.93	0.0335	urine total protein amount (VT:0000032)	urine protein excretion rate (CMO:0000759)	3	98651826	167012663	Rat
1578666	Vnigr1	Vascular neointimal growth QTL 1	4.6		artery morphology trait (VT:0002191)	artery lumen area (CMO:0001409)	3	151075912	189428310	Rat
1578656	Vnigr2	Vascular neointimal growth QTL 2	4.2		artery morphology trait (VT:0002191)	lesioned artery residual lumen area (CMO:0001417)	3	151075912	189428310	Rat
12879871	Am7	Aortic mass QTL 7		0.001	aorta mass (VT:0002845)	aorta weight to aorta length to body weight ratio (CMO:0002722)	3	141555229	186555229	Rat
631541	Bp81	Blood pressure QTL 81	4		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	3	144575244	189428310	Rat
2293087	Iddm27	Insulin dependent diabetes mellitus QTL 27	2.68		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	3	160357340	167835660	Rat
724532	Cm17	Cardiac mass QTL 17	2		heart mass (VT:0007028)	calculated heart weight (CMO:0000073)	3	116188400	161188400	Rat

Markers in Region

RH134425

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	3	140,474,574 - 140,474,767 (+)	MAPPER	mRatBN7.2
Rnor_6.0	3	147,476,671 - 147,476,863	NCBI	Rnor6.0
Rnor_5.0	3	153,826,526 - 153,826,718	UniSTS	Rnor5.0
RGSC_v3.4	3	142,325,771 - 142,325,963	UniSTS	RGSC3.4
Celera	3	139,229,460 - 139,229,652	UniSTS
RH 3.4 Map	3	1277.8	UniSTS
Cytogenetic Map	3	q41	UniSTS

RH140290

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	3	140,486,123 - 140,486,343 (+)	MAPPER	mRatBN7.2
Rnor_6.0	3	147,488,220 - 147,488,439	NCBI	Rnor6.0
Rnor_5.0	3	153,838,075 - 153,838,294	UniSTS	Rnor5.0
RGSC_v3.4	3	142,337,320 - 142,337,539	UniSTS	RGSC3.4
Celera	3	139,240,575 - 139,240,794	UniSTS
RH 3.4 Map	3	1268.7	UniSTS
Cytogenetic Map	3	q41	UniSTS

BM385076

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	3	140,474,557 - 140,474,710 (+)	MAPPER	mRatBN7.2
Rnor_6.0	3	147,476,654 - 147,476,806	NCBI	Rnor6.0
Rnor_5.0	3	153,826,509 - 153,826,661	UniSTS	Rnor5.0
RGSC_v3.4	3	142,325,754 - 142,325,906	UniSTS	RGSC3.4
Celera	3	139,229,443 - 139,229,595	UniSTS
RH 3.4 Map	3	1276.8	UniSTS
Cytogenetic Map	3	q41	UniSTS

UniSTS:234557

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	3	140,474,892 - 140,475,102 (+)	MAPPER	mRatBN7.2
Rnor_6.0	3	147,476,989 - 147,477,198	NCBI	Rnor6.0
Rnor_5.0	3	153,826,844 - 153,827,053	UniSTS	Rnor5.0
RGSC_v3.4	3	142,326,089 - 142,326,298	UniSTS	RGSC3.4
Celera	3	139,229,778 - 139,229,987	UniSTS
Cytogenetic Map	3	q41	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	165	91	90	59	91	59	6	355	191	11	144	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001014050	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001244768	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001244769	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001244770	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006235231	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006235234	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017591774	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039105051	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	BC079251	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BU670818	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CB556608	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CB766675	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CB806736	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH474050	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CV110036	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CV113127	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	DY318143	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000003	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JF912497	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000074295 ⟹ ENSRNOP00000066725

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	3	160,934,815 - 160,937,707 (-)	Ensembl
mRatBN7.2 Ensembl	3	140,474,484 - 140,477,376 (-)	Ensembl
Rnor_6.0 Ensembl	3	147,476,580 - 147,479,472 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000077580 ⟹ ENSRNOP00000072792

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	3	160,931,777 - 160,945,520 (-)	Ensembl
mRatBN7.2 Ensembl	3	140,474,476 - 140,485,093 (-)	Ensembl
Rnor_6.0 Ensembl	3	147,476,580 - 147,487,170 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000084722 ⟹ ENSRNOP00000070568

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	3	160,934,823 - 160,939,335 (-)	Ensembl
mRatBN7.2 Ensembl	3	140,474,484 - 140,478,977 (-)	Ensembl
Rnor_6.0 Ensembl	3	147,476,580 - 147,481,073 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000093860 ⟹ ENSRNOP00000087216

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	3	160,933,828 - 160,949,897 (-)	Ensembl
mRatBN7.2 Ensembl	3	140,474,249 - 140,480,625 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000097502 ⟹ ENSRNOP00000083945

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	3	140,474,484 - 140,478,569 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000103026 ⟹ ENSRNOP00000085228

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	3	140,474,485 - 140,480,625 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000116601 ⟹ ENSRNOP00000083568

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	3	160,934,378 - 160,939,944 (-)	Ensembl
mRatBN7.2 Ensembl	3	140,474,484 - 140,478,569 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000141424 ⟹ ENSRNOP00000107208

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	3	160,933,828 - 160,949,897 (-)	Ensembl

RefSeq Acc Id:

NM_001014050 ⟹ NP_001014072

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	160,934,815 - 160,937,707 (-)	NCBI
mRatBN7.2	3	140,474,484 - 140,477,376 (-)	NCBI
Rnor_6.0	3	147,476,580 - 147,479,472 (-)	NCBI
Rnor_5.0	3	153,826,434 - 153,837,025 (-)	NCBI
RGSC_v3.4	3	142,326,013 - 142,328,572 (-)	RGD
Celera	3	139,229,369 - 139,232,261 (-)	NCBI

Sequence:

show sequence

GTGGAGAAGTGATGTGGTAGGAATTAGTGTGTTCAAGCTAGGCTTCATGGGAGTCTGCTTTTTA
AATCTCTGTGACCTAAGGAAGTCACTTCCCAGAGTCTCAGTTTTCCCAGCTACAAAATGGTAAC
AGTGGCTTTCAGGCTCTTGGAGGTGGTAGGAAAGTAGCTGTGAGCGTCTGGCACACAGGCACAC
AGTGGAGAGCGTTGTCTTGAGATGTCTGGCTGTTCCGGTGAGGCTCTTCTGTGTTTGGGCATGC
TCTGGCCCAGTCTGTCTGGTATAGTACCACGTCCCATGTGACCATGGAGAACTTGAGCGGAGCC
CCGTATCCAGCTGCCAACTTTGTGCCTGTATCTGTCTTCTCGCCTCTGCCCTCGGGGTATGTAA
CGGCCATGCCCGTGGACACGCTGAGCCCGGGAGCCCCCACCACTCCCGCTTTACCTTTTCGCCT
GCGAACCAAGGTCCCCGGCTACCTGCTACCAAGGCCAGCAGATGGGGGAGCCAGGAAACCGAGT
GCTGTGGAACGCCTGGAGGCTGATAAGGCTAAGTACGTCAAGAGCCTGCGCGTGGCCAACACCC
GCCAAGAACCTGTGCAGCCCCCGCTCGCCAGGCAGCCCCTCTTCAGCCCAGGTTCTCGCGGCCC
AGTGCTCACACCCAGTCGCCGAGTCCTGCCCTGTTCTGGTCGCCGGCCCCAACTGGACCTAGAC
ATCCTTAGCAGCCTAATCAACCTGTGTGATAGTCCCGTGTCCCCATCTGAGGCCAACCGAACAC
CTGGACGGCCAGAAGGATCTGCCCACAAGGTCCCACCAGCCACCCCTCCTCGTCCGCCTCCTAG
TACTGTCGCTGTGCGCCGAGTGGATGTTCGTCCCCTGCCTGCTTCACCAGCTCGCCCCTATCCA
TCACCTGGCGCCGCTACCACTTCCAGCCCGGGCCGGCCCCCTGGTCTGCAACGCTCCAAGTCGG
ACCTGAGTGAGCGCTTTTCCAGGGCAGCAGCCGATCTTGAGCGCTTTTTTAACTTCTGCGGCTT
GGACCCAGAGGAAGCACGAGGATTGGGGGTGGCCCACCTGGCAAGGGCTAGCTCGGACATCGTG
TCGCTAGCCGGGCCAAGTGCTGGACCTTGCAGCTCTGAAGGGGGCTGCTCACGCCGCAGCTCTG
CTACAGTGGAAGAGCGGACCCTAGAGCGGGTCCCCTATGGGGTGTCTGTGATCGAGCGAAATGC
CCGTGTGATCAAGTGGCTGTATGGGTTGCGGCAGGCACGCGACCCTCCCACCACAGAGGGCTAG
GCCTCCTGGACTCAGGCCTCCTGGAAGGACATCATGAAGAGACAGTTGGCACTTTGTCCTTTCC
TGTATCCATTGGCTGCCTTCCTGCAGACCCAGAGACCCTTGGGTGAATTTAGTGTAGAGGCCAA
GACTTAGACCTAGACCAGCATCCTCTGGCAAGCAAGGACTGACCTGCAGAGGTTTGCTGTTGCC
CTTGGCCTCCCCCACCCCCTAACAAGGTTTGTGACACAAGTATGCTTCTGCGTGGTTCCTCGGG
TGAGACTGGATTTGGGCTGCTTACTCTCCACTGAGTTGGGAATCAATTGCTTTGCCAAGTCTGT
CTGCCCCAGACCCTATTTCCTTCTTCCCTGTCTGTCCTCTTTTGCTGACTTCCTCTTCCTTACC
CAAAGGGCCCTGGCTTCCTGGGAACTCACCCTGGGGAGGAGGTTGAAAGGATGGGGCCTGTCTG
CTGCTCTTCCTGGTCTTTGGCAGTTGGCCTAGGTGGGTAGACTATAGGAGGGATTGGTTAGGAG
CCTGACGCTCTGAATTATCTGTGGCTAATAAACACAAATGTTTGTTTCTCAA

hide sequence

RefSeq Acc Id:

NM_001244768 ⟹ NP_001231697

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	160,934,815 - 160,945,405 (-)	NCBI
mRatBN7.2	3	140,474,484 - 140,485,074 (-)	NCBI
Rnor_6.0	3	147,476,580 - 147,487,170 (-)	NCBI
Rnor_5.0	3	153,826,434 - 153,837,025 (-)	NCBI
Celera	3	139,229,369 - 139,239,525 (-)	NCBI

Sequence:

show sequence

GACGGCGGGCTCACTTCCCTTTCCTCTGGGCCCTGGGGACGGTCTCCCGGCGGGATTGTGGGAC
GGCCGGGACCTCTCGCTCGGAAGAGCCGACCGGTCTCCACACGCTGTGACCTCCTCAGGTCCGC
GGGGACCATCAGCTGTCAGCCTCTGCAGCCAGCGAGGAGCGGGATTCCTCCGGGCGTGGGCTGC
GGCGGAGCCCCGTATCCAGCTGCCAACTTTGTGCCTGTATCTGTCTTCTCGCCTCTGCCCTCGG
GGTATGTAACGGCCATGCCCGTGGACACGCTGAGCCCGGGAGCCCCCACCACTCCCGCTTTACC
TTTTCGCCTGCGAACCAAGGTCCCCGGCTACCTGCTACCAAGGCCAGCAGATGGGGGAGCCAGG
AAACCGAGTGCTGTGGAACGCCTGGAGGCTGATAAGGCTAAGTACGTCAAGAGCCTGCGCGTGG
CCAACACCCGCCAAGAACCTGTGCAGCCCCCGCTCGCCAGGCAGCCCCTCTTCAGCCCAGGTTC
TCGCGGCCCAGTGCTCACACCCAGTCGCCGAGTCCTGCCCTGTTCTGGTCGCCGGCCCCAACTG
GACCTAGACATCCTTAGCAGCCTAATCAACCTGTGTGATAGTCCCGTGTCCCCATCTGAGGCCA
ACCGAACACCTGGACGGCCAGAAGGATCTGCCCACAAGGTCCCACCAGCCACCCCTCCTCGTCC
GCCTCCTAGTACTGTCGCTGTGCGCCGAGTGGATGTTCGTCCCCTGCCTGCTTCACCAGCTCGC
CCCTATCCATCACCTGGCGCCGCTACCACTTCCAGCCCGGGCCGGCCCCCTGGTCTGCAACGCT
CCAAGTCGGACCTGAGTGAGCGCTTTTCCAGGGCAGCAGCCGATCTTGAGCGCTTTTTTAACTT
CTGCGGCTTGGACCCAGAGGAAGCACGAGGATTGGGGGTGGCCCACCTGGCAAGGGCTAGCTCG
GACATCGTGTCGCTAGCCGGGCCAAGTGCTGGACCTTGCAGCTCTGAAGGGGGCTGCTCACGCC
GCAGCTCTGCTACAGTGGAAGAGCGGACCCTAGAGCGGGTCCCCTATGGGGTGTCTGTGATCGA
GCGAAATGCCCGTGTGATCAAGTGGCTGTATGGGTTGCGGCAGGCACGCGACCCTCCCACCACA
GAGGGCTAGGCCTCCTGGACTCAGGCCTCCTGGAAGGACATCATGAAGAGACAGTTGGCACTTT
GTCCTTTCCTGTATCCATTGGCTGCCTTCCTGCAGACCCAGAGACCCTTGGGTGAATTTAGTGT
AGAGGCCAAGACTTAGACCTAGACCAGCATCCTCTGGCAAGCAAGGACTGACCTGCAGAGGTTT
GCTGTTGCCCTTGGCCTCCCCCACCCCCTAACAAGGTTTGTGACACAAGTATGCTTCTGCGTGG
TTCCTCGGGTGAGACTGGATTTGGGCTGCTTACTCTCCACTGAGTTGGGAATCAATTGCTTTGC
CAAGTCTGTCTGCCCCAGACCCTATTTCCTTCTTCCCTGTCTGTCCTCTTTTGCTGACTTCCTC
TTCCTTACCCAAAGGGCCCTGGCTTCCTGGGAACTCACCCTGGGGAGGAGGTTGAAAGGATGGG
GCCTGTCTGCTGCTCTTCCTGGTCTTTGGCAGTTGGCCTAGGTGGGTAGACTATAGGAGGGATT
GGTTAGGAGCCTGACGCTCTGAATTATCTGTGGCTAATAAACACAAATGTTTGTTTCTCAA

hide sequence

RefSeq Acc Id:

NM_001244769 ⟹ NP_001231698

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	160,934,815 - 160,939,308 (-)	NCBI
mRatBN7.2	3	140,474,484 - 140,478,977 (-)	NCBI
Rnor_6.0	3	147,476,580 - 147,481,073 (-)	NCBI
Rnor_5.0	3	153,826,434 - 153,837,025 (-)	NCBI
Celera	3	139,229,369 - 139,233,862 (-)	NCBI

Sequence:

show sequence

GCACATCAGGGATTGTCTTCAGTCTGTATTCGAGCCGAGGGCCGACTCCTGCTCAGAGAGAGAT
AGCAGATGAGGGGAGGGGGGTCACACAGTCTTAGCTCAGCTCAAGCCTCACCGCCTGAGTCTCC
AGGATTGCCTCCAAGTGAGGACGACTCGAAACCAAAACTAGGGGCTTTCCTGGAGCCCTGATCT
ACTTACTCCTTGGGAGCCTGAGGGAGGGACGAAGTCGGGCTACGGCACTGGAATAGTGACCAGA
AAGGCTCAAGCGGAGCCCCGTATCCAGCTGCCAACTTTGTGCCTGTATCTGTCTTCTCGCCTCT
GCCCTCGGGGTATGTAACGGCCATGCCCGTGGACACGCTGAGCCCGGGAGCCCCCACCACTCCC
GCTTTACCTTTTCGCCTGCGAACCAAGGTCCCCGGCTACCTGCTACCAAGGCCAGCAGATGGGG
GAGCCAGGAAACCGAGTGCTGTGGAACGCCTGGAGGCTGATAAGGCTAAGTACGTCAAGAGCCT
GCGCGTGGCCAACACCCGCCAAGAACCTGTGCAGCCCCCGCTCGCCAGGCAGCCCCTCTTCAGC
CCAGGTTCTCGCGGCCCAGTGCTCACACCCAGTCGCCGAGTCCTGCCCTGTTCTGGTCGCCGGC
CCCAACTGGACCTAGACATCCTTAGCAGCCTAATCAACCTGTGTGATAGTCCCGTGTCCCCATC
TGAGGCCAACCGAACACCTGGACGGCCAGAAGGATCTGCCCACAAGGTCCCACCAGCCACCCCT
CCTCGTCCGCCTCCTAGTACTGTCGCTGTGCGCCGAGTGGATGTTCGTCCCCTGCCTGCTTCAC
CAGCTCGCCCCTATCCATCACCTGGCGCCGCTACCACTTCCAGCCCGGGCCGGCCCCCTGGTCT
GCAACGCTCCAAGTCGGACCTGAGTGAGCGCTTTTCCAGGGCAGCAGCCGATCTTGAGCGCTTT
TTTAACTTCTGCGGCTTGGACCCAGAGGAAGCACGAGGATTGGGGGTGGCCCACCTGGCAAGGG
CTAGCTCGGACATCGTGTCGCTAGCCGGGCCAAGTGCTGGACCTTGCAGCTCTGAAGGGGGCTG
CTCACGCCGCAGCTCTGCTACAGTGGAAGAGCGGACCCTAGAGCGGGTCCCCTATGGGGTGTCT
GTGATCGAGCGAAATGCCCGTGTGATCAAGTGGCTGTATGGGTTGCGGCAGGCACGCGACCCTC
CCACCACAGAGGGCTAGGCCTCCTGGACTCAGGCCTCCTGGAAGGACATCATGAAGAGACAGTT
GGCACTTTGTCCTTTCCTGTATCCATTGGCTGCCTTCCTGCAGACCCAGAGACCCTTGGGTGAA
TTTAGTGTAGAGGCCAAGACTTAGACCTAGACCAGCATCCTCTGGCAAGCAAGGACTGACCTGC
AGAGGTTTGCTGTTGCCCTTGGCCTCCCCCACCCCCTAACAAGGTTTGTGACACAAGTATGCTT
CTGCGTGGTTCCTCGGGTGAGACTGGATTTGGGCTGCTTACTCTCCACTGAGTTGGGAATCAAT
TGCTTTGCCAAGTCTGTCTGCCCCAGACCCTATTTCCTTCTTCCCTGTCTGTCCTCTTTTGCTG
ACTTCCTCTTCCTTACCCAAAGGGCCCTGGCTTCCTGGGAACTCACCCTGGGGAGGAGGTTGAA
AGGATGGGGCCTGTCTGCTGCTCTTCCTGGTCTTTGGCAGTTGGCCTAGGTGGGTAGACTATAG
GAGGGATTGGTTAGGAGCCTGACGCTCTGAATTATCTGTGGCTAATAAACACAAATGTTTGTTT
CTCAA

hide sequence

RefSeq Acc Id:

NM_001244770 ⟹ NP_001231699

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	160,934,815 - 160,937,907 (-)	NCBI
mRatBN7.2	3	140,474,484 - 140,477,576 (-)	NCBI
Rnor_6.0	3	147,476,580 - 147,479,672 (-)	NCBI
Rnor_5.0	3	153,826,434 - 153,837,025 (-)	NCBI
Celera	3	139,229,369 - 139,232,461 (-)	NCBI

Sequence:

show sequence

GAGCCACATCATGAAGCTGAGACTCAGTGAACAAAGCAGCCAAAACCTGTGCCCTCGTGGAGCT
GACATTTTTGGAGTTGGGGACAGCAAAGAAAGAAAGATTCATATCCACACGGAGCCCCGTATCC
AGCTGCCAACTTTGTGCCTGTATCTGTCTTCTCGCCTCTGCCCTCGGGGTATGTAACGGCCATG
CCCGTGGACACGCTGAGCCCGGGAGCCCCCACCACTCCCGCTTTACCTTTTCGCCTGCGAACCA
AGGTCCCCGGCTACCTGCTACCAAGGCCAGCAGATGGGGGAGCCAGGAAACCGAGTGCTGTGGA
ACGCCTGGAGGCTGATAAGGCTAAGTACGTCAAGAGCCTGCGCGTGGCCAACACCCGCCAAGAA
CCTGTGCAGCCCCCGCTCGCCAGGCAGCCCCTCTTCAGCCCAGGTTCTCGCGGCCCAGTGCTCA
CACCCAGTCGCCGAGTCCTGCCCTGTTCTGGTCGCCGGCCCCAACTGGACCTAGACATCCTTAG
CAGCCTAATCAACCTGTGTGATAGTCCCGTGTCCCCATCTGAGGCCAACCGAACACCTGGACGG
CCAGAAGGATCTGCCCACAAGGTCCCACCAGCCACCCCTCCTCGTCCGCCTCCTAGTACTGTCG
CTGTGCGCCGAGTGGATGTTCGTCCCCTGCCTGCTTCACCAGCTCGCCCCTATCCATCACCTGG
CGCCGCTACCACTTCCAGCCCGGGCCGGCCCCCTGGTCTGCAACGCTCCAAGTCGGACCTGAGT
GAGCGCTTTTCCAGGGCAGCAGCCGATCTTGAGCGCTTTTTTAACTTCTGCGGCTTGGACCCAG
AGGAAGCACGAGGATTGGGGGTGGCCCACCTGGCAAGGGCTAGCTCGGACATCGTGTCGCTAGC
CGGGCCAAGTGCTGGACCTTGCAGCTCTGAAGGGGGCTGCTCACGCCGCAGCTCTGCTACAGTG
GAAGAGCGGACCCTAGAGCGGGTCCCCTATGGGGTGTCTGTGATCGAGCGAAATGCCCGTGTGA
TCAAGTGGCTGTATGGGTTGCGGCAGGCACGCGACCCTCCCACCACAGAGGGCTAGGCCTCCTG
GACTCAGGCCTCCTGGAAGGACATCATGAAGAGACAGTTGGCACTTTGTCCTTTCCTGTATCCA
TTGGCTGCCTTCCTGCAGACCCAGAGACCCTTGGGTGAATTTAGTGTAGAGGCCAAGACTTAGA
CCTAGACCAGCATCCTCTGGCAAGCAAGGACTGACCTGCAGAGGTTTGCTGTTGCCCTTGGCCT
CCCCCACCCCCTAACAAGGTTTGTGACACAAGTATGCTTCTGCGTGGTTCCTCGGGTGAGACTG
GATTTGGGCTGCTTACTCTCCACTGAGTTGGGAATCAATTGCTTTGCCAAGTCTGTCTGCCCCA
GACCCTATTTCCTTCTTCCCTGTCTGTCCTCTTTTGCTGACTTCCTCTTCCTTACCCAAAGGGC
CCTGGCTTCCTGGGAACTCACCCTGGGGAGGAGGTTGAAAGGATGGGGCCTGTCTGCTGCTCTT
CCTGGTCTTTGGCAGTTGGCCTAGGTGGGTAGACTATAGGAGGGATTGGTTAGGAGCCTGACGC
TCTGAATTATCTGTGGCTAATAAACACAAATGTTTGTTTCTCAA

hide sequence

RefSeq Acc Id:

XM_006235231 ⟹ XP_006235293

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	160,934,815 - 160,939,900 (-)	NCBI
mRatBN7.2	3	140,474,484 - 140,479,575 (-)	NCBI
Rnor_6.0	3	147,476,580 - 147,481,665 (-)	NCBI
Rnor_5.0	3	153,826,434 - 153,837,025 (-)	NCBI

Sequence:

show sequence

CCTGCGGGCACACAGGAGAAAAGGGTGTCATTTTAGGAGTGGTGGGAGGGAAAGTGGCCAGGTT
GGACCTCCCAGGCCCCATCCCCCAAACCCCTTCGTCAACTTTAGGAAAGTGACTCAGCCTGGCC
TGACTGGGGTTTCCATTAGTCAGCTTGATGACAATGGAGTTGCCTCATAGGAAGCCTACCCAGA
CCACACTAATGCTCACTGCACCTCGTTTAATCACGGAAAGATTAAAAGCCCAGAAAGAGCACTT
TCCCGTGCCTGGCCGGGGACATCAGAGAGAACCCAGCCCAATTCCATCAGCTGTGTTGCCGGCT
GTACAGGCTCCAAGTCGCATAAGAGCCCGGCTGGGTGAGCCTGGGGGCGCTATTCCGGCTAGGT
TTCCACACCGGGCTGTCTGTCGCCCATTTCGGTCACTGCCTGGCCCTCCTTCCCTCTCCTGGAA
CACTCCCAGCCGGCAGGTTCACCTGCCAGGCCCCGGAAATTGCGCAAAAGCCAGCTACCTGAAC
CAGGTGGGCGGGAGGCGTGCAGGCTGCTGGAAGGAGGCGGCTTGCACAGCCAGCGGAGCCCCGT
ATCCAGCTGCCAACTTTGTGCCTGTATCTGTCTTCTCGCCTCTGCCCTCGGGGTATGTAACGGC
CATGCCCGTGGACACGCTGAGCCCGGGAGCCCCCACCACTCCCGCTTTACCTTTTCGCCTGCGA
ACCAAGGTCCCCGGCTACCTGCTACCAAGGCCAGCAGATGGGGGAGCCAGGAAACCGAGTGCTG
TGGAACGCCTGGAGGCTGATAAGGCTAAGTACGTCAAGAGCCTGCGCGTGGCCAACACCCGCCA
AGAACCTGTGCAGCCCCCGCTCGCCAGGCAGCCCCTCTTCAGCCCAGGTTCTCGCGGCCCAGTG
CTCACACCCAGTCGCCGAGTCCTGCCCTGTTCTGGTCGCCGGCCCCAACTGGACCTAGACATCC
TTAGCAGCCTAATCAACCTGTGTGATAGTCCCGTGTCCCCATCTGAGGCCAACCGAACACCTGG
ACGGCCAGAAGGATCTGCCCACAAGGTCCCACCAGCCACCCCTCCTCGTCCGCCTCCTAGTACT
GTCGCTGTGCGCCGAGTGGATGTTCGTCCCCTGCCTGCTTCACCAGCTCGCCCCTATCCATCAC
CTGGCGCCGCTACCACTTCCAGCCCGGGCCGGCCCCCTGGTCTGCAACGCTCCAAGTCGGACCT
GAGTGAGCGCTTTTCCAGGGCAGCAGCCGATCTTGAGCGCTTTTTTAACTTCTGCGGCTTGGAC
CCAGAGGAAGCACGAGGATTGGGGGTGGCCCACCTGGCAAGGGCTAGCTCGGACATCGTGTCGC
TAGCCGGGCCAAGTGCTGGACCTTGCAGCTCTGAAGGGGGCTGCTCACGCCGCAGCTCTGCTAC
AGTGGAAGAGCGGACCCTAGAGCGGGTCCCCTATGGGGTGTCTGTGATCGAGCGAAATGCCCGT
GTGATCAAGTGGCTGTATGGGTTGCGGCAGGCACGCGACCCTCCCACCACAGAGGGCTAGGCCT
CCTGGACTCAGGCCTCCTGGAAGGACATCATGAAGAGACAGTTGGCACTTTGTCCTTTCCTGTA
TCCATTGGCTGCCTTCCTGCAGACCCAGAGACCCTTGGGTGAATTTAGTGTAGAGGCCAAGACT
TAGACCTAGACCAGCATCCTCTGGCAAGCAAGGACTGACCTGCAGAGGTTTGCTGTTGCCCTTG
GCCTCCCCCACCCCCTAACAAGGTTTGTGACACAAGTATGCTTCTGCGTGGTTCCTCGGGTGAG
ACTGGATTTGGGCTGCTTACTCTCCACTGAGTTGGGAATCAATTGCTTTGCCAAGTCTGTCTGC
CCCAGACCCTATTTCCTTCTTCCCTGTCTGTCCTCTTTTGCTGACTTCCTCTTCCTTACCCAAA
GGGCCCTGGCTTCCTGGGAACTCACCCTGGGGAGGAGGTTGAAAGGATGGGGCCTGTCTGCTGC
TCTTCCTGGTCTTTGGCAGTTGGCCTAGGTGGGTAGACTATAGGAGGGATTGGTTAGGAGCCTG
ACGCTCTGAATTATCTGTGGCTAATAAACACAAATGTTTGTTTCTCAA

hide sequence

RefSeq Acc Id:

XM_006235234 ⟹ XP_006235296

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	160,934,815 - 160,938,844 (-)	NCBI
mRatBN7.2	3	140,474,484 - 140,478,516 (-)	NCBI
Rnor_6.0	3	147,476,580 - 147,480,620 (-)	NCBI
Rnor_5.0	3	153,826,434 - 153,837,025 (-)	NCBI

Sequence:

show sequence

CCTGCTGGGCTTAGGTCCTGCCCTCCAGGATCGGACTTAGAGACCCTCGGAGGGGGCGGAGTCT
GCCAACTCCACAGTCAGAGCCTCAGTTTATGACAGTGCGTCTGGTTTCGGGAGCGCTGCCCATT
TTTCAGTTCAGGACACACTTGTGGAATATCTAGCATGTGTTGAGAGCCACATCATGAAGCTGAG
ACTCAGTGAACAAAGCAGCCAAAACCTGTGCCCTCGTGGAGCTGACATTTTTGGAGTTGGGGAC
AGCAAAGAAAGAAAGATTCATATCCACACGGAGCCCCGTATCCAGCTGCCAACTTTGTGCCTGT
ATCTGTCTTCTCGCCTCTGCCCTCGGGGTATGTAACGGCCATGCCCGTGGACACGCTGAGCCCG
GGAGCCCCCACCACTCCCGCTTTACCTTTTCGCCTGCGAACCAAGGTCCCCGGCTACCTGCTAC
CAAGGCCAGCAGATGGGGGAGCCAGGAAACCGAGTGCTGTGGAACGCCTGGAGGCTGATAAGGC
TAAGTACGTCAAGAGCCTGCGCGTGGCCAACACCCGCCAAGAACCTGTGCAGCCCCCGCTCGCC
AGGCAGCCCCTCTTCAGCCCAGGTTCTCGCGGCCCAGTGCTCACACCCAGTCGCCGAGTCCTGC
CCTGTTCTGGTCGCCGGCCCCAACTGGACCTAGACATCCTTAGCAGCCTAATCAACCTGTGTGA
TAGTCCCGTGTCCCCATCTGAGGCCAACCGAACACCTGGACGGCCAGAAGGATCTGCCCACAAG
GTCCCACCAGCCACCCCTCCTCGTCCGCCTCCTAGTACTGTCGCTGTGCGCCGAGTGGATGTTC
GTCCCCTGCCTGCTTCACCAGCTCGCCCCTATCCATCACCTGGCGCCGCTACCACTTCCAGCCC
GGGCCGGCCCCCTGGTCTGCAACGCTCCAAGTCGGACCTGAGTGAGCGCTTTTCCAGGGCAGCA
GCCGATCTTGAGCGCTTTTTTAACTTCTGCGGCTTGGACCCAGAGGAAGCACGAGGATTGGGGG
TGGCCCACCTGGCAAGGGCTAGCTCGGACATCGTGTCGCTAGCCGGGCCAAGTGCTGGACCTTG
CAGCTCTGAAGGGGGCTGCTCACGCCGCAGCTCTGCTACAGTGGAAGAGCGGACCCTAGAGCGG
GTCCCCTATGGGGTGTCTGTGATCGAGCGAAATGCCCGTGTGATCAAGTGGCTGTATGGGTTGC
GGCAGGCACGCGACCCTCCCACCACAGAGGGCTAGGCCTCCTGGACTCAGGCCTCCTGGAAGGA
CATCATGAAGAGACAGTTGGCACTTTGTCCTTTCCTGTATCCATTGGCTGCCTTCCTGCAGACC
CAGAGACCCTTGGGTGAATTTAGTGTAGAGGCCAAGACTTAGACCTAGACCAGCATCCTCTGGC
AAGCAAGGACTGACCTGCAGAGGTTTGCTGTTGCCCTTGGCCTCCCCCACCCCCTAACAAGGTT
TGTGACACAAGTATGCTTCTGCGTGGTTCCTCGGGTGAGACTGGATTTGGGCTGCTTACTCTCC
ACTGAGTTGGGAATCAATTGCTTTGCCAAGTCTGTCTGCCCCAGACCCTATTTCCTTCTTCCCT
GTCTGTCCTCTTTTGCTGACTTCCTCTTCCTTACCCAAAGGGCCCTGGCTTCCTGGGAACTCAC
CCTGGGGAGGAGGTTGAAAGGATGGGGCCTGTCTGCTGCTCTTCCTGGTCTTTGGCAGTTGGCC
TAGGTGGGTAGACTATAGGAGGGATTGGTTAGGAGCCTGACGCTCTGAATTATCTGTGGCTAAT
AAACACAAATGTTTGTTTCTCAA

hide sequence

RefSeq Acc Id:

XM_017591774 ⟹ XP_017447263

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	160,934,815 - 160,938,855 (-)	NCBI
mRatBN7.2	3	140,474,484 - 140,478,525 (-)	NCBI
Rnor_6.0	3	147,476,580 - 147,480,620 (-)	NCBI

Sequence:

show sequence

CCTGCTGGGCTTAGGTCCTGCCCTCCAGGATCGGACTTAGAGACCCTCGGAGGGGGCGGAGTCT
GCCAACTCCACAGTCAGAGCCTCAGTTTATGACAGTGCGTCTGGTTTCGGGAGCGCTGCCCATT
TTTCAGCGGAGCCCCGTATCCAGCTGCCAACTTTGTGCCTGTATCTGTCTTCTCGCCTCTGCCC
TCGGGGTATGTAACGGCCATGCCCGTGGACACGCTGAGCCCGGGAGCCCCCACCACTCCCGCTT
TACCTTTTCGCCTGCGAACCAAGGTCCCCGGCTACCTGCTACCAAGGCCAGCAGATGGGGGAGC
CAGGAAACCGAGTGCTGTGGAACGCCTGGAGGCTGATAAGGCTAAGTACGTCAAGAGCCTGCGC
GTGGCCAACACCCGCCAAGAACCTGTGCAGCCCCCGCTCGCCAGGCAGCCCCTCTTCAGCCCAG
GTTCTCGCGGCCCAGTGCTCACACCCAGTCGCCGAGTCCTGCCCTGTTCTGGTCGCCGGCCCCA
ACTGGACCTAGACATCCTTAGCAGCCTAATCAACCTGTGTGATAGTCCCGTGTCCCCATCTGAG
GCCAACCGAACACCTGGACGGCCAGAAGGATCTGCCCACAAGGTCCCACCAGCCACCCCTCCTC
GTCCGCCTCCTAGTACTGTCGCTGTGCGCCGAGTGGATGTTCGTCCCCTGCCTGCTTCACCAGC
TCGCCCCTATCCATCACCTGGCGCCGCTACCACTTCCAGCCCGGGCCGGCCCCCTGGTCTGCAA
CGCTCCAAGTCGGACCTGAGTGAGCGCTTTTCCAGGGCAGCAGCCGATCTTGAGCGCTTTTTTA
ACTTCTGCGGCTTGGACCCAGAGGAAGCACGAGGATTGGGGGTGGCCCACCTGGCAAGGGCTAG
CTCGGACATCGTGTCGCTAGCCGGGCCAAGTGCTGGACCTTGCAGCTCTGAAGGGGGCTGCTCA
CGCCGCAGCTCTGCTACAGTGGAAGAGCGGACCCTAGAGCGGGTCCCCTATGGGGTGTCTGTGA
TCGAGCGAAATGCCCGTGTGATCAAGTGGCTGTATGGGTTGCGGCAGGCACGCGACCCTCCCAC
CACAGAGGGCTAGGCCTCCTGGACTCAGGCCTCCTGGAAGGACATCATGAAGAGACAGTTGGCA
CTTTGTCCTTTCCTGTATCCATTGGCTGCCTTCCTGCAGACCCAGAGACCCTTGGGTGAATTTA
GTGTAGAGGCCAAGACTTAGACCTAGACCAGCATCCTCTGGCAAGCAAGGACTGACCTGCAGAG
GTTTGCTGTTGCCCTTGGCCTCCCCCACCCCCTAACAAGGTTTGTGACACAAGTATGCTTCTGC
GTGGTTCCTCGGGTGAGACTGGATTTGGGCTGCTTACTCTCCACTGAGTTGGGAATCAATTGCT
TTGCCAAGTCTGTCTGCCCCAGACCCTATTTCCTTCTTCCCTGTCTGTCCTCTTTTGCTGACTT
CCTCTTCCTTACCCAAAGGGCCCTGGCTTCCTGGGAACTCACCCTGGGGAGGAGGTTGAAAGGA
TGGGGCCTGTCTGCTGCTCTTCCTGGTCTTTGGCAGTTGGCCTAGGTGGGTAGACTATAGGAGG
GATTGGTTAGGAGCCTGACGCTCTGAATTATCTGTGGCTAATAAACACAAATGTTTGTTTCTCA
A

hide sequence

RefSeq Acc Id:

XM_039105051 ⟹ XP_038960979

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	160,934,815 - 160,938,845 (-)	NCBI
mRatBN7.2	3	140,474,484 - 140,478,515 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_001014072	(Get FASTA)	NCBI Sequence Viewer
	NP_001231697	(Get FASTA)	NCBI Sequence Viewer
	NP_001231698	(Get FASTA)	NCBI Sequence Viewer
	NP_001231699	(Get FASTA)	NCBI Sequence Viewer
	XP_006235293	(Get FASTA)	NCBI Sequence Viewer
	XP_006235296	(Get FASTA)	NCBI Sequence Viewer
	XP_017447263	(Get FASTA)	NCBI Sequence Viewer
	XP_038960979	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH79251	(Get FASTA)	NCBI Sequence Viewer
	AEQ39014	(Get FASTA)	NCBI Sequence Viewer
	EDL86088	(Get FASTA)	NCBI Sequence Viewer
	EDL86089	(Get FASTA)	NCBI Sequence Viewer
	EDL86090	(Get FASTA)	NCBI Sequence Viewer
	EDL86091	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000066725
	ENSRNOP00000066725.2
	ENSRNOP00000070568
	ENSRNOP00000070568.1
	ENSRNOP00000072792
	ENSRNOP00000072792.1
	ENSRNOP00000083568
	ENSRNOP00000083568.2
	ENSRNOP00000087216
	ENSRNOP00000087216.1
	ENSRNOP00000107208
	ENSRNOP00000107208.1

RefSeq Acc Id:	NP_001014072 ⟸ NM_001014050
- Peptide Label:	isoform 2
- UniProtKB:	M0RB04 (UniProtKB/TrEMBL), Q6AXZ9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MENLSGAPYPAANFVPVSVFSPLPSGYVTAMPVDTLSPGAPTTPALPFRLRTKVPGYLLPRPAD GGARKPSAVERLEADKAKYVKSLRVANTRQEPVQPPLARQPLFSPGSRGPVLTPSRRVLPCSGR RPQLDLDILSSLINLCDSPVSPSEANRTPGRPEGSAHKVPPATPPRPPPSTVAVRRVDVRPLPA SPARPYPSPGAATTSSPGRPPGLQRSKSDLSERFSRAAADLERFFNFCGLDPEEARGLGVAHLA RASSDIVSLAGPSAGPCSSEGGCSRRSSATVEERTLERVPYGVSVIERNARVIKWLYGLRQARD PPTTEG hide sequence

RefSeq Acc Id:	NP_001231697 ⟸ NM_001244768
- Peptide Label:	isoform 1
- UniProtKB:	G4XVC3 (UniProtKB/TrEMBL), A0A0G2JY94 (UniProtKB/TrEMBL), Q6AXZ9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MPVDTLSPGAPTTPALPFRLRTKVPGYLLPRPADGGARKPSAVERLEADKAKYVKSLRVANTRQ EPVQPPLARQPLFSPGSRGPVLTPSRRVLPCSGRRPQLDLDILSSLINLCDSPVSPSEANRTPG RPEGSAHKVPPATPPRPPPSTVAVRRVDVRPLPASPARPYPSPGAATTSSPGRPPGLQRSKSDL SERFSRAAADLERFFNFCGLDPEEARGLGVAHLARASSDIVSLAGPSAGPCSSEGGCSRRSSAT VEERTLERVPYGVSVIERNARVIKWLYGLRQARDPPTTEG hide sequence

RefSeq Acc Id:	NP_001231698 ⟸ NM_001244769
- Peptide Label:	isoform 1
- UniProtKB:	G4XVC3 (UniProtKB/TrEMBL), A0A0G2JY94 (UniProtKB/TrEMBL), Q6AXZ9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MPVDTLSPGAPTTPALPFRLRTKVPGYLLPRPADGGARKPSAVERLEADKAKYVKSLRVANTRQ EPVQPPLARQPLFSPGSRGPVLTPSRRVLPCSGRRPQLDLDILSSLINLCDSPVSPSEANRTPG RPEGSAHKVPPATPPRPPPSTVAVRRVDVRPLPASPARPYPSPGAATTSSPGRPPGLQRSKSDL SERFSRAAADLERFFNFCGLDPEEARGLGVAHLARASSDIVSLAGPSAGPCSSEGGCSRRSSAT VEERTLERVPYGVSVIERNARVIKWLYGLRQARDPPTTEG hide sequence

RefSeq Acc Id:	NP_001231699 ⟸ NM_001244770
- Peptide Label:	isoform 1
- UniProtKB:	G4XVC3 (UniProtKB/TrEMBL), A0A0G2JY94 (UniProtKB/TrEMBL), Q6AXZ9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MPVDTLSPGAPTTPALPFRLRTKVPGYLLPRPADGGARKPSAVERLEADKAKYVKSLRVANTRQ EPVQPPLARQPLFSPGSRGPVLTPSRRVLPCSGRRPQLDLDILSSLINLCDSPVSPSEANRTPG RPEGSAHKVPPATPPRPPPSTVAVRRVDVRPLPASPARPYPSPGAATTSSPGRPPGLQRSKSDL SERFSRAAADLERFFNFCGLDPEEARGLGVAHLARASSDIVSLAGPSAGPCSSEGGCSRRSSAT VEERTLERVPYGVSVIERNARVIKWLYGLRQARDPPTTEG hide sequence

RefSeq Acc Id:	XP_006235293 ⟸ XM_006235231
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I6A2V0 (UniProtKB/TrEMBL)
- Sequence:	show sequence MTMELPHRKPTQTTLMLTAPRLITERLKAQKEHFPVPGRGHQREPSPIPSAVLPAVQAPSRIRA RLGEPGGAIPARFPHRAVCRPFRSLPGPPSLSWNTPSRQVHLPGPGNCAKASYLNQVGGRRAGC WKEAACTASGAPYPAANFVPVSVFSPLPSGYVTAMPVDTLSPGAPTTPALPFRLRTKVPGYLLP RPADGGARKPSAVERLEADKAKYVKSLRVANTRQEPVQPPLARQPLFSPGSRGPVLTPSRRVLP CSGRRPQLDLDILSSLINLCDSPVSPSEANRTPGRPEGSAHKVPPATPPRPPPSTVAVRRVDVR PLPASPARPYPSPGAATTSSPGRPPGLQRSKSDLSERFSRAAADLERFFNFCGLDPEEARGLGV AHLARASSDIVSLAGPSAGPCSSEGGCSRRSSATVEERTLERVPYGVSVIERNARVIKWLYGLR QARDPPTTEG hide sequence

RefSeq Acc Id:	XP_006235296 ⟸ XM_006235234
- Peptide Label:	isoform X2
- UniProtKB:	G4XVC3 (UniProtKB/TrEMBL), A0A0G2JY94 (UniProtKB/TrEMBL), Q6AXZ9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MPVDTLSPGAPTTPALPFRLRTKVPGYLLPRPADGGARKPSAVERLEADKAKYVKSLRVANTRQ EPVQPPLARQPLFSPGSRGPVLTPSRRVLPCSGRRPQLDLDILSSLINLCDSPVSPSEANRTPG RPEGSAHKVPPATPPRPPPSTVAVRRVDVRPLPASPARPYPSPGAATTSSPGRPPGLQRSKSDL SERFSRAAADLERFFNFCGLDPEEARGLGVAHLARASSDIVSLAGPSAGPCSSEGGCSRRSSAT VEERTLERVPYGVSVIERNARVIKWLYGLRQARDPPTTEG hide sequence

RefSeq Acc Id:	XP_017447263 ⟸ XM_017591774
- Peptide Label:	isoform X2
- UniProtKB:	G4XVC3 (UniProtKB/TrEMBL), A0A0G2JY94 (UniProtKB/TrEMBL), Q6AXZ9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MPVDTLSPGAPTTPALPFRLRTKVPGYLLPRPADGGARKPSAVERLEADKAKYVKSLRVANTRQ EPVQPPLARQPLFSPGSRGPVLTPSRRVLPCSGRRPQLDLDILSSLINLCDSPVSPSEANRTPG RPEGSAHKVPPATPPRPPPSTVAVRRVDVRPLPASPARPYPSPGAATTSSPGRPPGLQRSKSDL SERFSRAAADLERFFNFCGLDPEEARGLGVAHLARASSDIVSLAGPSAGPCSSEGGCSRRSSAT VEERTLERVPYGVSVIERNARVIKWLYGLRQARDPPTTEG hide sequence

Ensembl Acc Id:

ENSRNOP00000070568 ⟸ ENSRNOT00000084722

Ensembl Acc Id:

ENSRNOP00000072792 ⟸ ENSRNOT00000077580

Ensembl Acc Id:

ENSRNOP00000066725 ⟸ ENSRNOT00000074295

RefSeq Acc Id:	XP_038960979 ⟸ XM_039105051
- Peptide Label:	isoform X2
- UniProtKB:	G4XVC3 (UniProtKB/TrEMBL), A0A0G2JY94 (UniProtKB/TrEMBL), Q6AXZ9 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000083945 ⟸ ENSRNOT00000097502

Ensembl Acc Id:

ENSRNOP00000083568 ⟸ ENSRNOT00000116601

Ensembl Acc Id:

ENSRNOP00000087216 ⟸ ENSRNOT00000093860

Ensembl Acc Id:

ENSRNOP00000085228 ⟸ ENSRNOT00000103026

Ensembl Acc Id:

ENSRNOP00000107208 ⟸ ENSRNOT00000141424

Protein Domains

Centrosome-associated FAM110 C-terminal Centrosome-associated FAM110 N-terminal

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-M0RB04-F1-model_v2	AlphaFold	M0RB04	1-326	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13692529

Promoter ID:

EPDNEW_R3053

Type:

single initiation site

Name:

Fam110a_1

Description:

family with sequence similarity 110, member A

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	3	147,487,158 - 147,487,218	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1308904	AgrOrtholog
BioCyc Gene	G2FUF-47291	BioCyc
Ensembl Genes	ENSRNOG00000050946	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000074295	ENTREZGENE
	ENSRNOT00000074295.4	UniProtKB/TrEMBL
	ENSRNOT00000077580	ENTREZGENE
	ENSRNOT00000077580.3	UniProtKB/TrEMBL
	ENSRNOT00000084722	ENTREZGENE
	ENSRNOT00000084722.3	UniProtKB/TrEMBL
	ENSRNOT00000093860	ENTREZGENE
	ENSRNOT00000093860.2	UniProtKB/TrEMBL
	ENSRNOT00000116601	ENTREZGENE
	ENSRNOT00000116601.2	UniProtKB/TrEMBL
	ENSRNOT00000141424	ENTREZGENE
	ENSRNOT00000141424.1	UniProtKB/TrEMBL
IMAGE_CLONE	IMAGE:7133086	IMAGE-MGC_LOAD
InterPro	FAM110	UniProtKB/TrEMBL
	FAM110_C	UniProtKB/TrEMBL
	FAM110_N	UniProtKB/TrEMBL
KEGG Report	rno:311535	UniProtKB/TrEMBL
MGC_CLONE	MGC:94345	IMAGE-MGC_LOAD
NCBI Gene	311535	ENTREZGENE
PANTHER	PROTEIN FAM110A	UniProtKB/TrEMBL
	PTHR14758	UniProtKB/TrEMBL
Pfam	FAM110_C	UniProtKB/TrEMBL
	FAM110_N	UniProtKB/TrEMBL
PhenoGen	Fam110a	PhenoGen
RatGTEx	ENSRNOG00000050946	RatGTEx
UniProt	A0A0G2JY94	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I5ZVL3_RAT	UniProtKB/TrEMBL
	A0A8I6A2V0	ENTREZGENE
	G4XVC3	ENTREZGENE, UniProtKB/TrEMBL
	M0RB04	ENTREZGENE, UniProtKB/TrEMBL
	Q6AXZ9	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2008-03-07	Fam110a	family with sequence similarity 110, member A	RGD1308904	similar to RIKEN cDNA 5430432M24	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2005-12-06	RGD1308904	similar to RIKEN cDNA 5430432M24	RGD1308904_predicted	similar to RIKEN cDNA 5430432M24 (predicted)	Symbol and Name updated	1559027	APPROVED
2005-01-20	RGD1308904_predicted	similar to RIKEN cDNA 5430432M24 (predicted)	LOC311535_predicted		Symbol and Name status set to approved	1331353	APPROVED
2005-01-12	LOC311535_predicted	similar to RIKEN cDNA 5430432M24 (predicted)			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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