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Gene: Mfhas1 (multifunctional ROCO family signaling regulator 1) Rattus norvegicus

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Symbol:

Mfhas1

Name:

multifunctional ROCO family signaling regulator 1

RGD ID:

1308812

Description:

Predicted to enable GTP binding activity; protein phosphatase 2A binding activity; and ubiquitin protein ligase binding activity. Predicted to be involved in several processes, including erythrocyte differentiation; regulation of macrophage activation; and regulation of signal transduction. Predicted to be located in cytoplasm. Orthologous to human MFHAS1 (multifunctional ROCO family signaling regulator 1); INTERACTS WITH 17alpha-ethynylestradiol; 2,2',5,5'-tetrachlorobiphenyl; 2,3,7,8-tetrachlorodibenzodioxine.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

LOC306508; malignant fibrous histiocytoma amplified sequence 1; malignant fibrous histiocytoma-amplified sequence 1

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	16	63,248,833 - 63,336,441 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	16	63,250,455 - 63,336,602 (-)	Ensembl				GRCr8
mRatBN7.2	16	56,545,462 - 56,633,649 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	16	56,546,207 - 56,633,743 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	16	61,871,278 - 61,951,249 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	16	65,285,260 - 65,365,229 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	16	60,505,245 - 60,585,208 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	16	60,120,457 - 60,208,550 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	16	60,128,201 - 60,208,462 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	16	59,795,263 - 59,882,664 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	16	60,251,500 - 60,330,831 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	16	54,605,099 - 54,684,103 (-)	NCBI		Celera
RGSC_v3.1	16	60,258,856 - 60,330,906 (-)	NCBI
Cytogenetic Map	16	q12.2	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

fibrous histiocytoma (ISO)

malignant fibrous histiocytoma (ISO)

myoepithelioma (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(1->4)-beta-D-glucan (ISO)

1,2-dimethylhydrazine (ISO)

17alpha-ethynylestradiol (EXP)

17beta-estradiol (ISO)

2,2',5,5'-tetrachlorobiphenyl (EXP)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2,3,7,8-Tetrachlorodibenzofuran (EXP)

3,4-methylenedioxymethamphetamine (EXP)

4,4'-sulfonyldiphenol (ISO)

4-hydroxyphenyl retinamide (ISO)

6-propyl-2-thiouracil (EXP)

aflatoxin B1 (ISO)

all-trans-retinoic acid (ISO)

amiodarone (ISO)

amitrole (EXP)

amphetamine (EXP)

aristolochic acid A (ISO)

arsane (ISO)

arsenic atom (ISO)

benzo[a]pyrene (EXP,ISO)

benzo[a]pyrene diol epoxide I (ISO)

Benzo[k]fluoranthene (ISO)

bisphenol A (EXP,ISO)

bisphenol F (ISO)

C60 fullerene (EXP)

cadmium atom (EXP,ISO)

cadmium dichloride (EXP,ISO)

caffeine (ISO)

carbon nanotube (ISO)

choline (ISO)

ciguatoxin CTX1B (ISO)

clofibric acid (EXP)

copper(II) chloride (ISO)

cyclosporin A (ISO)

dibutyl phthalate (ISO)

dorsomorphin (ISO)

doxorubicin (ISO)

fenthion (ISO)

folic acid (ISO)

FR900359 (ISO)

indoles (EXP)

L-methionine (ISO)

lipopolysaccharide (ISO)

manganese atom (ISO)

manganese(0) (ISO)

manganese(II) chloride (ISO)

methidathion (ISO)

methimazole (EXP)

methyl methanesulfonate (ISO)

methylmercury chloride (ISO)

N-nitrosodiethylamine (EXP)

nickel atom (ISO)

paracetamol (ISO)

PCB138 (EXP)

perfluorooctane-1-sulfonic acid (ISO)

phenobarbital (ISO)

phenylephrine (EXP)

pirinixic acid (ISO)

poly(I:C) (ISO)

potassium chromate (ISO)

pregnenolone 16alpha-carbonitrile (EXP,ISO)

propiconazole (ISO)

quercetin (ISO)

S-(1,2-dichlorovinyl)-L-cysteine (ISO)

SB 431542 (ISO)

sodium arsenite (ISO)

sulfadimethoxine (EXP)

sunitinib (ISO)

tetrachloromethane (ISO)

thioacetamide (EXP)

titanium dioxide (ISO)

trichostatin A (ISO)

triclosan (ISO)

triphenyl phosphate (ISO)

troglitazone (ISO)

valproic acid (ISO)

vinclozolin (EXP)

vorinostat (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

biological_process (ND)

defense response (IEA,ISO)

erythrocyte differentiation (IEA,ISO)

immune system process (IEA)

inflammatory response (IBA,IEA,ISO)

innate immune response (IBA,IEA,ISO)

intracellular signal transduction (IBA,IEA,ISO)

negative regulation of inflammatory response (IEA,ISO)

negative regulation of protein localization to nucleus (IEA,ISO)

negative regulation of signal transduction (IEA)

negative regulation of toll-like receptor 2 signaling pathway (IEA,ISO)

negative regulation of toll-like receptor 4 signaling pathway (IEA,ISO)

positive regulation of ERK1 and ERK2 cascade (IEA,ISO)

positive regulation of JNK cascade (IEA,ISO)

positive regulation of p38MAPK cascade (IEA,ISO)

positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction (IEA,ISO)

positive regulation of toll-like receptor 2 signaling pathway (IEA,ISO)

regulation of macrophage activation (IEA,ISO)

regulation of toll-like receptor signaling pathway (IEA,ISO)

Cellular Component

cytoplasm (IEA,ISO)

cytoskeleton (ISO)

lysosome (ISO)

mitochondrion (ISO)

Molecular Function

GTP binding (IEA,ISO)

nucleotide binding (IEA)

protein binding (ISO)

protein phosphatase 2A binding (IEA,ISO)

ubiquitin protein ligase binding (IEA,ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
3.	Comprehensive gene review and curation	RGD comprehensive gene curation
4.	Identification of a novel gene, MASL1, within an amplicon at 8p23.1 detected in malignant fibrous histiocytomas by comparative genomic hybridization.	Sakabe T, etal., Cancer Res. 1999 Feb 1;59(3):511-5.

Additional References at PubMed

PMID:20616063	PMID:23327923	PMID:24286120	PMID:26599367	PMID:28471450	PMID:28609714	PMID:29168081

Genomics

Comparative Map Data

Mfhas1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	16	63,248,833 - 63,336,441 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	16	63,250,455 - 63,336,602 (-)	Ensembl				GRCr8
mRatBN7.2	16	56,545,462 - 56,633,649 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	16	56,546,207 - 56,633,743 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	16	61,871,278 - 61,951,249 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	16	65,285,260 - 65,365,229 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	16	60,505,245 - 60,585,208 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	16	60,120,457 - 60,208,550 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	16	60,128,201 - 60,208,462 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	16	59,795,263 - 59,882,664 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	16	60,251,500 - 60,330,831 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	16	54,605,099 - 54,684,103 (-)	NCBI		Celera
RGSC_v3.1	16	60,258,856 - 60,330,906 (-)	NCBI
Cytogenetic Map	16	q12.2	NCBI

MFHAS1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	8	8,783,354 - 8,893,630 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	8	8,783,354 - 8,893,630 (-)	Ensembl			hg38	GRCh38
GRCh37	8	8,640,864 - 8,751,140 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	8	8,679,409 - 8,788,541 (-)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	8	8,680,941 - 8,787,978	NCBI
Celera	8	7,770,247 - 7,879,341 (-)	NCBI		Celera
Cytogenetic Map	8	p23.1	NCBI
HuRef	8	7,566,885 - 7,675,726 (-)	NCBI		HuRef
CHM1_1	8	8,707,354 - 8,816,498 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	8	10,850,500 - 10,960,846 (+)	NCBI		T2T-CHM13v2.0

Mfhas1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	8	36,054,922 - 36,146,603 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	8	36,054,952 - 36,146,603 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	8	35,587,789 - 35,679,449 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	8	35,587,798 - 35,679,449 (+)	Ensembl			mm10	GRCm38
MGSCv37	8	36,650,852 - 36,742,503 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	8	37,056,315 - 37,147,966 (+)	NCBI		MGSCv36	mm8
Celera	8	38,233,298 - 38,323,358 (+)	NCBI		Celera
Cytogenetic Map	8	A4	NCBI
cM Map	8	21.16	NCBI

Mfhas1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955463	4,900,060 - 4,993,793 (-)	Ensembl
ChiLan1.0	NW_004955463	4,900,115 - 4,993,793 (-)	NCBI	ChiLan1.0	ChiLan1.0

MFHAS1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	7	25,239,514 - 25,349,559 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	8	1,266,572 - 1,376,568 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	8	10,318,455 - 10,428,469 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3

MFHAS1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	16	35,579,531 - 35,676,552 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	16	35,579,585 - 35,674,063 (+)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	16	36,043,903 - 36,140,864 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	16	37,611,966 - 37,715,247 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	16	37,611,037 - 37,724,094 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	16	35,717,994 - 35,814,591 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	16	36,280,244 - 36,377,395 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	16	36,399,273 - 36,496,290 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Mfhas1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404943	43,482,035 - 43,574,638 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936573	1,567,798 - 1,662,525 (+)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936573	1,567,798 - 1,662,442 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

MFHAS1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	15	56,200,455 - 56,295,064 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	15	56,200,455 - 56,296,151 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1

MFHAS1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	8	10,158,951 - 10,268,286 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	8	10,159,421 - 10,268,323 (+)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666052	32,127,152 - 32,236,483 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Mfhas1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624839	4,908,639 - 5,000,677 (-)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624839	4,908,861 - 5,000,218 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Mfhas1
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	13	51,382,041 - 51,472,555 (-)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Mfhas1
594 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	34
Count of miRNA genes:	30
Interacting mature miRNAs:	34
Transcripts:	ENSRNOT00000015203
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
2300163	Bmd64	Bone mineral density QTL 64	5.3	0.0001	lumbar vertebra mineral mass (VT:0010511)	volumetric bone mineral density (CMO:0001553)	16	44455123	89455123	Rat
70215	Niddm29	Non-insulin dependent diabetes mellitus QTL 29	3.54		blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	16	36928782	81928782	Rat
1578768	Stresp22	Stress response QTL 22	2.8		thymus mass (VT:0004954)	thymus wet weight (CMO:0000855)	16	41992064	86992064	Rat
737826	Alc11	Alcohol consumption QTL 11	3.2		consumption behavior trait (VT:0002069)	ethanol drink intake rate (CMO:0001407)	16	4234212	66955197	Rat
2302057	Pia29	Pristane induced arthritis QTL 29	3.6	0.001	blood autoantibody amount (VT:0003725)	serum immunoglobulin M-type rheumatoid factor level relative to an arbitrary reference serum (CMO:0002111)	16	28468701	73468701	Rat
7205510	Activ5	Activity QTL 5	3.78	0.00028	locomotor behavior trait (VT:0001392)	number of entries into a discrete space in an experimental apparatus (CMO:0000960)	16	49099196	91442908	Rat
631525	Pia14	Pristane induced arthritis QTL 14	4.4		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	16	62414464	75736480	Rat
1357403	Slep4	Serum leptin concentration QTL 4	3.91		blood leptin amount (VT:0005667)	serum leptin level (CMO:0000780)	16	32361043	77361043	Rat
8694453	Bw172	Body weight QTL 172	8.33	0.001	retroperitoneal fat pad mass (VT:0010430)	retroperitoneal fat pad weight to body weight ratio (CMO:0000635)	16	31058039	76058039	Rat
7411648	Foco22	Food consumption QTL 22	15	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	16	59428714	91442908	Rat
1298529	Arunc1	Aerobic running capacity QTL 1	4		exercise endurance trait (VT:0002332)	longest distance run on treadmill (CMO:0001406)	16	34398294	79398294	Rat
2312663	Slep9	Serum leptin concentration QTL 9		0.001	blood leptin amount (VT:0005667)	serum leptin level (CMO:0000780)	16	839086	66195506	Rat
2312660	Bw95	Body weight QTL 95		0.05	inguinal fat pad mass (VT:0010424)	inguinal fat pad weight to body weight ratio (CMO:0001253)	16	839086	66195506	Rat
6903294	Stl30	Serum triglyceride level QTL 30	2.6	0.0013	blood triglyceride amount (VT:0002644)	plasma triglyceride level (CMO:0000548)	16	31885271	76885271	Rat
2293690	Bss45	Bone structure and strength QTL 45	5.13	0.0001	lumbar vertebra morphology trait (VT:0010494)	lumbar vertebra cortical cross-sectional area (CMO:0001690)	16	44455123	89455123	Rat
8694364	Abfw7	Abdominal fat weight QTL 7	12.22	0.001	visceral adipose mass (VT:0010063)	abdominal fat pad weight to body weight ratio (CMO:0000095)	16	59428714	91442908	Rat
2312666	Insul16	Insulin level QTL 16		0.01	blood insulin amount (VT:0001560)	serum insulin level (CMO:0000358)	16	839086	66195506	Rat
8694429	Bw164	Body weight QTL 164	5	0.001	body lean mass (VT:0010483)	lean tissue morphological measurement (CMO:0002184)	16	59428714	91442908	Rat
70205	Gcr3	Gastric cancer resistance QTL 3	2.3		stomach morphology trait (VT:0000470)	stomach tumor diameter (CMO:0001889)	16	17730818	72536785	Rat
2312669	Stl23	Serum triglyceride level QTL 23		0.01	blood triglyceride amount (VT:0002644)	serum triglyceride level (CMO:0000360)	16	839086	66195506	Rat

Markers in Region

RH131104

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	16	56,621,697 - 56,621,911 (+)	MAPPER	mRatBN7.2
Rnor_6.0	16	60,197,057 - 60,197,270	NCBI	Rnor6.0
Rnor_5.0	16	59,871,172 - 59,871,385	UniSTS	Rnor5.0
RGSC_v3.4	16	60,319,426 - 60,319,639	UniSTS	RGSC3.4
Celera	16	54,672,698 - 54,672,911	UniSTS
RH 3.4 Map	16	559.4	UniSTS
Cytogenetic Map	16	q12.2	UniSTS

RH134391

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	16	56,545,529 - 56,545,743 (+)	MAPPER	mRatBN7.2
Rnor_6.0	16	60,120,525 - 60,120,738	NCBI	Rnor6.0
Rnor_5.0	16	59,795,331 - 59,795,544	UniSTS	Rnor5.0
RGSC_v3.4	16	60,243,824 - 60,244,037	UniSTS	RGSC3.4
Celera	16	54,597,423 - 54,597,636	UniSTS
RH 3.4 Map	16	557.1	UniSTS
Cytogenetic Map	16	q12.2	UniSTS

RH143897

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	16	56,616,692 - 56,616,815 (+)	MAPPER	mRatBN7.2
Rnor_6.0	16	60,191,935 - 60,192,057	NCBI	Rnor6.0
Rnor_5.0	16	59,866,050 - 59,866,172	UniSTS	Rnor5.0
RGSC_v3.4	16	60,314,476 - 60,314,598	UniSTS	RGSC3.4
Celera	16	54,668,328 - 54,668,450	UniSTS
RH 3.4 Map	16	559.2	UniSTS
Cytogenetic Map	16	q12.2	UniSTS

BF399307

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	16	56,550,923 - 56,551,093 (+)	MAPPER	mRatBN7.2
Rnor_6.0	16	60,125,919 - 60,126,088	NCBI	Rnor6.0
Rnor_5.0	16	59,800,725 - 59,800,894	UniSTS	Rnor5.0
RGSC_v3.4	16	60,249,218 - 60,249,387	UniSTS	RGSC3.4
Celera	16	54,602,817 - 54,602,986	UniSTS
RH 3.4 Map	16	559.7	UniSTS
Cytogenetic Map	16	q12.2	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	163	91	90	59	92	59	6	356	192	11	142	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001107316	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001436564	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001436565	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NR_199175	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006253224	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006253227	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_001841536	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_001841537	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	CH473970	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ232773	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000016	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000015203 ⟹ ENSRNOP00000015203

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	16	63,256,577 - 63,336,602 (-)	Ensembl
mRatBN7.2 Ensembl	16	56,553,206 - 56,633,743 (-)	Ensembl
Rnor_6.0 Ensembl	16	60,128,201 - 60,208,462 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000098060 ⟹ ENSRNOP00000081189

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	16	63,250,455 - 63,336,602 (-)	Ensembl
mRatBN7.2 Ensembl	16	56,546,207 - 56,633,743 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000108535 ⟹ ENSRNOP00000080425

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	16	63,325,252 - 63,336,602 (-)	Ensembl
mRatBN7.2 Ensembl	16	56,621,259 - 56,633,743 (-)	Ensembl

RefSeq Acc Id:

NM_001107316 ⟹ NP_001100786

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	16	63,256,577 - 63,336,403 (-)	NCBI
mRatBN7.2	16	56,553,206 - 56,633,105 (-)	NCBI
Rnor_6.0	16	60,128,201 - 60,208,462 (-)	NCBI
Rnor_5.0	16	59,795,263 - 59,882,664 (-)	NCBI
RGSC_v3.4	16	60,251,500 - 60,330,831 (-)	RGD
Celera	16	54,605,099 - 54,684,103 (-)	RGD

Sequence:

show sequence

ATGGCTGGCAAGGACAGTGGCAACCTGAAGACGGTGAGGCTGTGGCGGGACGCCGCCCTGCGCG
CCAGGAAGCTGCGGAGCAACCTGCGCCAGCTCACGCTCAGCTGCCCGGGGGCGGGAGGCGACTC
ACTCGAGTCCCCCGACGCCCCCCAGCTGGTGCTGCCGGCCAACATCGGGGACATTGAGGTGCTG
AACCTGGGGAACAACGGCCTCGAGGATGTGCCTGAAGGTCTGGGGTCAGCTCTGGGCAGCCTTC
GCGTCTTGGTCTTGCGCAGGAACCGCTTTGCCCGGCTGCCCCCTGCGGTGGCGGAGCTAGGCCA
CCACCTTACCGAACTGGACGTAAGCCACAACCGGCTAACCATCCTGGGAGCCGAGGTGGTGAGC
GCCCTAAGGGAGCTGCGCAAACTCAACCTGAGCCACAACCAGCTGCCAGCCCTGCCTGCCCAGC
TCGGTGCCCTCGCCCACCTGGAGGAGCTAGATGTCAGCTTCAACCGGCTAGCGCATCTGCCAGA
TTCCTTCTCCTGCCTCAACCACCTACGTACCCTTGACGTGGACCACAACCAACTCACCGCCTTT
CCCCAGCAGCTGCTGCAGCTGGCTGCCCTGGAGGAGCTGGACGTATCCAGCAACCGGCTGCGAG
GCCTACCTGAGGATATCAGTGCCCTGCGTGCCCTCAAGATTCTCTGGCTTAGCGGGGCCGAGCT
TGGCACTCTGCCCAGCGGCTTCTGTGAGCTGGCCAGTTTGGAGAGCCTCATGTTAGACAACAAC
GGGCTACAGGCTCTGCCCGACGAGTTCAGCCGTCTGCAAAGGCTCAAAATGCTCAACCTTTCTT
CCAACCTCTTCGAGGAGTTCCCCGCTGCGCTGCTGCCCCTGGCTGGGCTGGAGGAGCTCTACCT
TAGTCGCAATCAGCTCACCTCAGTGCCCTCTCTTATCGCCGGGCTGGGCCGCCTTCTCACCTTG
TGGCTGGATAATAACCGCATCCGCTACCTGCCAGACTCCATTGTGGAGCTGACTGGCCTGGAGG
AGCTGGTGCTTCAAGGCAACCAGATCGCTGTTCTGCCTGACAACTTTGGCCAGCTCTCCCGGGT
AGGTTTGTGGAAAATCAAGGACAACCCGCTGATTCAGCCCCCTTACGAAGTCTGCATGAAGGGG
ATCCCTTATATCGCAGCCTACCAGAAGGAACTGGCTCATTCTCAACCAGCGGTTCAGCCCCGTC
TCAAGCTGCTCCTGATGGGCCACAAGGCTGCCGGAAAGACCCTGCTTCGACACTGCCTCACTGA
GGACAAAGTGGAAGGAGGGCAAGGAGGAGGGGACAAGGAGAAGAGCTACCTACCTTTCCCTCCC
CTTGGGAGTAAGGGCATCGAGGTGACCAGCTGGACTGCGGACGCTTCCCGGGGCTTGCGGTTCA
TTGTGTATGACTTAGCTGGTGATGAAAGCTACGAGGTGATCCAGCCCTTCTTCCTCTCCCCAGG
AGCCCTATATGTGCTCGTGGTCAACTTGGCCACCTATGAACCTCGTTGCTTTCCTACTACTGTG
GGCTCCTTCCTGCATCGGGTGGGGGCCCGTGTGCCTCATGCTGTGGTGTGTATTGTGGGCACAC
ATGCTGACCTGTGTGGGGAGCGGGAGCTTGAGGAGAAGTGTCTGGATATTCACCGACAGATTGC
CCTGCAGGAGAAGCATGATGCAGAGGGCCTAAGCCATCTAGCCAAGGTGGTTGATGAGGCCCTG
GCTCGGGACTTCGAGCTACGCTCTGCCAGTCCCCATGCAGCTTACTACGGTGTTTCAGACAAGA
ACCTTCGGAGACGCAAGGCCCATTTTCAGTACCTGCTTAACCACCGGCTGCAGATCCTCTCGCC
CGTGTTGCCTGTGAGCTGCAGGGACCCCCTCCAACTGCAACGCCTTCGAGACAAGCTGCTCTCT
GTAGCCGAGCACCGGGAAATCTTTCCCAACTTACACAGAGTCCTGCCTCGGTCCTGGCAGGTAC
TGGAGGAGCTGCACTTCCAGCCACCCCAGGCACAACGTCTGTGGCTAAGCTGGTGGGACTCTGC
CCGCTTGGGCCTGCAGGCAGGTCTGACTGAGGACCGGCTCCAGAGTGCCCTTTCTTACCTGCAT
GAGAGCGGCAAACTGCTCTATTTTGAGGATAGCCCGGCCCTCAAGGAGCACGTCTTCCACAACC
TCACCCGCCTCATTGACATCCTCAATGTTTTTTTCCAGAGAGATGCTTCTTTGCTGCTTCATAA
ACTGCTCCTAGGGACCAACGGAGAGGGCGAGGGGGAGGGGGAAAGTTTCCCCACCATAGCAGTG
CCCACTCCGGGCCAGGACCCACTCCGGGCCACCCAGCTCCATCATTACGTGGAAGGCTTTTTGT
TGCACGGGCTTCTGCCAGCTCATATCATTCGGTTGCTGCTCAAGCCTCACGTCCAGGCCCAGCA
GGACTTGCAGCTCCTGCTGGAGCTGCTGGAGAAGATGGGACTCTGTTACTGCCTCAATAAACCC
AAAGGCAAGCCTTTGAACGGCTCCGCAGCTTGGTACAAGTTCCCATGCTACGTGCAGAATGAGG
TGCCCCACGCGGAGGCCTGGATTAATGGCACCAACCTAGCCGGGCAGTCTTTTGTGGCTGAACA
GTTGCAGATCGAATACAGTTTTCCCTTTACCTTCCCACCTGGATTGTTTGCACGTTACAGTGTT
CAGATCAACAGCCACGTGGTGCACAGGTCGGATGGGAAATTTCAGATCTTTGCGTATCGAGGGA
AAGTGCCCGTGGTGGTGAGCTACAGACCTGCCAAGGGGGTCCTGCAGCCAGACACCCTATCCAT
CGCCAGCCATGCGTCGCTACCCAATATATGGACCGCATGGCAAGCCATCACCCCTTTGGTAGAG
GAACTGAATGTCCTACTTCAGGAATGGCCTGGACTACACTACACTGTGCACATCCTCTGTTCTA
AGTGCCTTAAGAGAGGGTCGCCAAATCCACACGCTTTCCCAGGGGAGTTGCTGAGTCAGCCCAG
GCCAGAAGGGGTGGCAGAGATCATCTGCCCCAAGAACGGCAGCGAGCGCGTGAATGTGGCTTTG
GTTTACCCACCTACACCGACTGTGATCAGCCCTTGTTCCAAGTACCTTCGTACTTTCTTGGAAA
ATTAAGTGGAAAGGATAGTGCTTCTTCCCCTCTGCCACCAT

hide sequence

RefSeq Acc Id:

XM_006253224 ⟹ XP_006253286

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	16	63,248,833 - 63,336,441 (-)	NCBI
mRatBN7.2	16	56,545,462 - 56,633,646 (-)	NCBI
Rnor_6.0	16	60,120,457 - 60,208,550 (-)	NCBI
Rnor_5.0	16	59,795,263 - 59,882,664 (-)	NCBI

Sequence:

show sequence

CGGGAGCTGGGCGCCGGCCGGAGTCCAGCGCGGCATGCAGCTGCGGGCTCCGGTACCGGCGTGA
GGGTTGTCGGCGCGGGCTCCGGCCATGGCTGGCAAGGACAGTGGCAACCTGAAGACGGTGAGGC
TGTGGCGGGACGCCGCCCTGCGCGCCAGGAAGCTGCGGAGCAACCTGCGCCAGCTCACGCTCAG
CTGCCCGGGGGCGGGAGGCGACTCACTCGAGTCCCCCGACGCCCCCCAGCTGGTGCTGCCGGCC
AACATCGGGGACATTGAGGTGCTGAACCTGGGGAACAACGGCCTCGAGGATGTGCCTGAAGGTC
TGGGGTCAGCTCTGGGCAGCCTTCGCGTCTTGGTCTTGCGCAGGAACCGCTTTGCCCGGCTGCC
CCCTGCGGTGGCGGAGCTAGGCCACCACCTTACCGAACTGGACGTAAGCCACAACCGGCTAACC
ATCCTGGGAGCCGAGGTGGTGAGCGCCCTAAGGGAGCTGCGCAAACTCAACCTGAGCCACAACC
AGCTGCCAGCCCTGCCTGCCCAGCTCGGTGCCCTCGCCCACCTGGAGGAGCTAGATGTCAGCTT
CAACCGGCTAGCGCATCTGCCAGATTCCTTCTCCTGCCTCAACCACCTACGTACCCTTGACGTG
GACCACAACCAACTCACCGCCTTTCCCCAGCAGCTGCTGCAGCTGGCTGCCCTGGAGGAGCTGG
ACGTATCCAGCAACCGGCTGCGAGGCCTACCTGAGGATATCAGTGCCCTGCGTGCCCTCAAGAT
TCTCTGGCTTAGCGGGGCCGAGCTTGGCACTCTGCCCAGCGGCTTCTGTGAGCTGGCCAGTTTG
GAGAGCCTCATGTTAGACAACAACGGGCTACAGGCTCTGCCCGACGAGTTCAGCCGTCTGCAAA
GGCTCAAAATGCTCAACCTTTCTTCCAACCTCTTCGAGGAGTTCCCCGCTGCGCTGCTGCCCCT
GGCTGGGCTGGAGGAGCTCTACCTTAGTCGCAATCAGCTCACCTCAGTGCCCTCTCTTATCGCC
GGGCTGGGCCGCCTTCTCACCTTGTGGCTGGATAATAACCGCATCCGCTACCTGCCAGACTCCA
TTGTGGAGCTGACTGGCCTGGAGGAGCTGGTGCTTCAAGGCAACCAGATCGCTGTTCTGCCTGA
CAACTTTGGCCAGCTCTCCCGGGTAGGTTTGTGGAAAATCAAGGACAACCCGCTGATTCAGCCC
CCTTACGAAGTCTGCATGAAGGGGATCCCTTATATCGCAGCCTACCAGAAGGAACTGGCTCATT
CTCAACCAGCGGTTCAGCCCCGTCTCAAGCTGCTCCTGATGGGCCACAAGGCTGCCGGAAAGAC
CCTGCTTCGACACTGCCTCACTGAGGACAAAGTGGAAGGAGGGCAAGGAGGAGGGGACAAGGAG
AAGAGCTACCTACCTTTCCCTCCCCTTGGGAGTAAGGGCATCGAGGTGACCAGCTGGACTGCGG
ACGCTTCCCGGGGCTTGCGGTTCATTGTGTATGACTTAGCTGGTGATGAAAGCTACGAGGTGAT
CCAGCCCTTCTTCCTCTCCCCAGGAGCCCTATATGTGCTCGTGGTCAACTTGGCCACCTATGAA
CCTCGTTGCTTTCCTACTACTGTGGGCTCCTTCCTGCATCGGGTGGGGGCCCGTGTGCCTCATG
CTGTGGTGTGTATTGTGGGCACACATGCTGACCTGTGTGGGGAGCGGGAGCTTGAGGAGAAGTG
TCTGGATATTCACCGACAGATTGCCCTGCAGGAGAAGCATGATGCAGAGGGCCTAAGCCATCTA
GCCAAGGTGGTTGATGAGGCCCTGGCTCGGGACTTCGAGCTACGCTCTGCCAGTCCCCATGCAG
CTTACTACGGTGTTTCAGACAAGAACCTTCGGAGACGCAAGGCCCATTTTCAGTACCTGCTTAA
CCACCGGCTGCAGATCCTCTCGCCCGTGTTGCCTGTGAGCTGCAGGGACCCCCTCCAACTGCAA
CGCCTTCGAGACAAGCTGCTCTCTGTAGCCGAGCACCGGGAAATCTTTCCCAACTTACACAGAG
TCCTGCCTCGGTCCTGGCAGGTACTGGAGGAGCTGCACTTCCAGCCACCCCAGGCACAACGTCT
GTGGCTAAGCTGGTGGGACTCTGCCCGCTTGGGCCTGCAGGCAGGTCTGACTGAGGACCGGCTC
CAGAGTGCCCTTTCTTACCTGCATGAGAGCGGCAAACTGCTCTATTTTGAGGATAGCCCGGCCC
TCAAGGAGCACGTCTTCCACAACCTCACCCGCCTCATTGACATCCTCAATGTTTTTTTCCAGAG
AGATGCTTCTTTGCTGCTTCATAAACTGCTCCTAGGGACCAACGGAGAGGGCGAGGGGGAGGGG
GAAAGTTTCCCCACCATAGCAGTGCCCACTCCGGGCCAGGACCCACTCCGGGCCACCCAGCTCC
ATCATTACGTGGAAGGCTTTTTGTTGCACGGGCTTCTGCCAGCTCATATCATTCGGTTGCTGCT
CAAGCCTCACGTCCAGGCCCAGCAGGACTTGCAGCTCCTGCTGGAGCTGCTGGAGAAGATGGGA
CTCTGTTACTGCCTCAATAAACCCAAAGGCAAGCCTTTGAACGGCTCCGCAGCTTGGTACAAGT
TCCCATGCTACGTGCAGAATGAGGTGCCCCACGCGGAGGCCTGGATTAATGGCACCAACCTAGC
CGGGCAGTCTTTTGTGGCTGAACAGTTGCAGATCGAATACAGTTTTCCCTTTACCTTCCCACCT
GGATTGTTTGCACGTTACAGTGTTCAGATCAACAGCCACGTGGTGCACAGGTCGGATGGGAAAT
TTCAGATCTTTGCGTATCGAGGGAAAGTGCCCGTGGTGGTGAGCTACAGACCTGCCAAGGGGGT
CCTGCAGCCAGACACCCTATCCATCGCCAGCCATGCGTCGCTACCCAATATATGGACCGCATGG
CAAGCCATCACCCCTTTGGTAGAGGAACTGAATGTCCTACTTCAGGAATGGCCTGGACTACACT
ACACTGTGCACATCCTCTGTTCTAAGTGCCTTAAGAGAGGGTCGCCAAATCCACACGCTTTCCC
AGGGGAGTTGCTGAGTCAGCCCAGGCCAGAAGGGGTGGCAGAGATCATCTGCCCCAAGAACGGC
AGCGAGCGCGTGAATGTGGCTTTGGTTTACCCACCTACACCGACTGTGATCAGCCCTTGTTCCA
AGAAGAACGTTGGTGAGAAGCACAGAAACCAGTGACATTCGTGGCTGTGGAATTTTCATGGCAT
TAACAGAGCATGGGACCGACTGGGACATCTTCTGCCCCTCACGAGCCTGCCATGCTCCCAAGCG
CCTTCTGGGGCCCCAGAGTGAAACCGTGCACCGCATCGGGGTGCTTGCAGAGGACCCTTGGAGG
GGTTGGAGGGGGCTGGGAAGATGGGGACAAACATGGAGCAAATGTTTCACAACCTGAACCTCAG
AACTGTGATCCTCCAAGGAGAGAGCTACTTGAAGAAAAGGGAAAAAAAAAGTTAACAGGCTTCT
CAGGGATTGTGACTTCTGTGTACACATGAGCCATAAAGCTCCAGGTCAGGCGGCAGTATTTAGA
GCACTCAGATTTCAGTTCTGTTCAATGTGAAGGAGGGATCAACTGACGTTCACCGCTGTCCCGT
AACTAGTGTAAGATATGTATATGTTAATCTTTATTTTTATAATATGCAAATACATTTAAATTTA
TACAGTTTTGGCGCTTCTAGCATTAGTTAACACTGGGTGCAATATTCTGCATGAGAACTGTGCC
AAGACGGGGCTGATGCTTCTAGTGTCAGACCTTTGGTTCTTTTCGTTGCCCTTTAGCCCACCTG
CTTGACTGAAAAGGACAGAGAAAGCTTCTCCCTGTCAGTCCGTCCAGGGGTAGGTGCAAGAATT
CTAATAACCGCCAGGAGCGTTCAGCCCATTGGCAGAGTCCCCTCCCATCTTTTCAGTGCACACC
CTGCTTGCTAGTCACTGGACATGGTGGTAGAATGATGACTATTCTGTCCCTTCACATCACCACT
ACTGGGGCAGAGGGACATCCTAGAGGCCAAATGAGGTGAAGAATCTCTGAGAACCTGATTCTTG
GAGCAACTTGCGATAATCTGAGTTCAGTTCTAAATCTTGTAGCCGTTCTACTGCTATGCACCCC
CCTCTCCCTGACCCCCCAGCACAGTGTGCATGAGTTAGCAGGGCCCTCTGTGAACTCTCCATCT
GACTATTGGCCTTCCTGGAGGAACATCCGTTTCACGGAACTCCATCCCTCATTGGCTGTTTATT
CATACAGAGCCACTTGGAGGAAGTCTGCAGCCAAGGTCCTAGTAGAGCCCTTGTTTTGAAACCT
CTAGGAGGTAAACATTTAAAAACAAACTCCACACACTGCTCTCCAGTGGCCTCCTAGTTAGGAC
CAAACAGCCTTTGCTGCAGTAGAGACGCAGTCTCTGAAGAACGTGAAGGCCTCTGTTTACATCT
GCCTCTTCCGTGTGTTGACAGGAAGCATGTAAAACTGACTGTTCCCCACAAGAAAGGTGTGTCA
GCTGGTCTTACTCTGTCGCCTGCATTCTGAAGTATCGATTCTTAGAATGCCACAGCCCACACCG
TCACCACAAATCTTTAAGAGAAATGCAAGCAGGTCACTGCGCTCTTGAGAAATTACAGACTGAT
TCGTGTTGGATCTGTTCAGTTGACTTCACTGCCCCCAGAGGCCGCTCTGTGGAGGCAATCTCTC
AGAAATCAGAATCTAGTGGGGATTGTCTCTCTTTTATGTTTCGAATACTTGAACACGGCAAGTC
CAGTTTTAAAAATTTCTCTTACCTTTCAGAACACAGTTGCAGGATGGGTGAGAATCTGGTTGAT
CTCTTCTGTCATAGTTCTCATGTGTGTGTGTGTGCAAGTGTGAACCGAACAGTTTGCATTTCTA
TTGCTTCGTAGACCACTGAATTATTGGGCAATAGTTTTTTGTTTTTGTTTTTTATTAATTGGCA
CCAGACAGTTCTGAAACTGTCAAGTCAGCAAAGTCCAACTAGCTTTACAATGTCCTATATGACT
TTGGGCTTACTCCCCAGAGGGCCATGTCAAATAAAAATAAGGCCCCTTGGGTGAGCATACCCTG
CAAATGGTTGCTATTTTCATAAACACAGATGCCCGTGTTCTGAATGCCTGCTACTTTCTGACAA
GTGATGTTACATGTTGTTATCCGAACCCTAGAGAAGCACCGAGAATGAGGGAACCTTGGCGGTC
ACATGTGTTGTGGCCAAGGTTGGCACGATCAGAGGGTCATGCACCCGAAAGAGCTCCAGCAAAC
TGTGAGAACTTGCCTCAGTGTGTGGGGGAGAGGGCTGAGATACAGAAACACCTCTGCCCAAGAA
GAATCTCAGCATCTGTGTAGGAAATTCTGTTTCCTTATTTCACACCCGGGAAGACTCAGCGGCC
AGCCGCTGAGGGGCCGCCCATCCGCTAAGCACAAGAGGAATGCGTTCTACCCAAGGAGCCCCTC
GCCTCTCACACGCGCTCCAAGTTTGTTATGGTTTCTATTCTTACAACTCGTGGTATCAAAACCA
TTTCCTGGGATTGTTGAAGTGCTGCCAGAGTAAATGGTTTCCCCCTTCTTTGGAAAAACAAAAA
CAAACAAAAACAAAAACAAAAAAACCCCGACAGTGCTCATATTTGATGTGTGCACTGGACTCTT
TTGAATGAATAAAGTGGAAGGGCTTGATAGGATTCCAGTGGAGTGTGTGTTTTTTCATGCTGCA
GTCTGTGAATTGTAACTGTGGTTTCCCGGTTCATTGTCCTAACGGGGCAGAAATTTAAAAAAAA
AAAAAAATCAATAAAAACACAATGAAATGGTTAA

hide sequence

RefSeq Acc Id:

XM_006253227 ⟹ XP_006253289

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	16	63,319,486 - 63,336,441 (-)	NCBI
mRatBN7.2	16	56,621,609 - 56,633,649 (-)	NCBI
Rnor_6.0	16	60,196,968 - 60,208,550 (-)	NCBI
Rnor_5.0	16	59,795,263 - 59,882,664 (-)	NCBI

Sequence:

show sequence

CGGGAGCTGGGCGCCGGCCGGAGTCCAGCGCGGCATGCAGCTGCGGGCTCCGGTACCGGCGTGA
GGGTTGTCGGCGCGGGCTCCGGCCATGGCTGGCAAGGACAGTGGCAACCTGAAGACGGTGAGGC
TGTGGCGGGACGCCGCCCTGCGCGCCAGGAAGCTGCGGAGCAACCTGCGCCAGCTCACGCTCAG
CTGCCCGGGGGCGGGAGGCGACTCACTCGAGTCCCCCGACGCCCCCCAGCTGGTGCTGCCGGCC
AACATCGGGGACATTGAGGTGCTGAACCTGGGGAACAACGGCCTCGAGGATGTGCCTGAAGGTC
TGGGGTCAGCTCTGGGCAGCCTTCGCGTCTTGGTCTTGCGCAGGAACCGCTTTGCCCGGCTGCC
CCCTGCGGTGGCGGAGCTAGGCCACCACCTTACCGAACTGGACGTAAGCCACAACCGGCTAACC
ATCCTGGGAGCCGAGGTGGTGAGCGCCCTAAGGGAGCTGCGCAAACTCAACCTGAGCCACAACC
AGCTGCCAGCCCTGCCTGCCCAGCTCGGTGCCCTCGCCCACCTGGAGGAGCTAGATGTCAGCTT
CAACCGGCTAGCGCATCTGCCAGATTCCTTCTCCTGCCTCAACCACCTACGTACCCTTGACGTG
GACCACAACCAACTCACCGCCTTTCCCCAGCAGCTGCTGCAGCTGGCTGCCCTGGAGGAGCTGG
ACGTATCCAGCAACCGGCTGCGAGGCCTACCTGAGGATATCAGTGCCCTGCGTGCCCTCAAGAT
TCTCTGGCTTAGCGGGGCCGAGCTTGGCACTCTGCCCAGCGGCTTCTGTGAGCTGGCCAGTTTG
GAGAGCCTCATGTTAGACAACAACGGGCTACAGGCTCTGCCCGACGAGTTCAGCCGTCTGCAAA
GGCTCAAAATGCTCAACCTTTCTTCCAACCTCTTCGAGGAGTTCCCCGCTGCGCTGCTGCCCCT
GGCTGGGCTGGAGGAGCTCTACCTTAGTCGCAATCAGCTCACCTCAGTGCCCTCTCTTATCGCC
GGGCTGGGCCGCCTTCTCACCTTGTGGCTGGATAATAACCGCATCCGCTACCTGCCAGACTCCA
TTGTGGAGCTGACTGGCCTGGAGGAGCTGGTGCTTCAAGGCAACCAGATCGCTGTTCTGCCTGA
CAACTTTGGCCAGCTCTCCCGGGTAGGTTTGTGGAAAATCAAGGACAACCCGCTGATTCAGCCC
CCTTACGAAGTCTGCATGAAGGGGATCCCTTATATCGCAGCCTACCAGAAGGAACTGGCTCATT
CTCAACCAGCGGTTCAGCCCCGTCTCAAGCTGCTCCTGATGGGCCACAAGGCTGCCGGAAAGAC
CCTGCTTCGACACTGCCTCACTGAGGACAAAGTGGAAGGAGGGCAAGGAGGAGGGGACAAGGAG
AAGAGCTACCTACCTTTCCCTCCCCTTGGGAGTAAGGGCATCGAGGTGACCAGCTGGACTGCGG
ACGCTTCCCGGGGCTTGCGGTTCATTGTGTATGACTTAGCTGGTGATGAAAGCTACGAGGTGAT
CCAGCCCTTCTTCCTCTCCCCAGGAGCCCTATATGTGCTCGTGGTCAACTTGGCCACCTATGAA
CCTCGTTGCTTTCCTACTACTGTGGGCTCCTTCCTGCATCGGGTGGGGGCCCGTGTGCCTCATG
CTGTGGTGTGTATTGTGGGCACACATGCTGACCTGTGTGGGGAGCGGGAGCTTGAGGAGAAGTG
TCTGGATATTCACCGACAGATTGCCCTGCAGGAGAAGCATGATGCAGAGGGCCTAAGCCATCTA
GCCAAGGTGGTTGATGAGGCCCTGGCTCGGGACTTCGAGCTACGCTCTGCCAGTCCCCATGCAG
CTTACTACGGTGTTTCAGACAAGAACCTTCGGAGACGCAAGGCCCATTTTCAGTACCTGCTTAA
CCACCGGCTGCAGATCCTCTCGCCCGTGTTGCCTGTGAGCTGCAGGGACCCCCTCCAACTGCAA
CGCCTTCGAGACAAGCTGCTCTCTGTAGCCGAGCACCGGGAAATCTTTCCCAACTTACACAGAG
TCCTGCCTCGGTCCTGGCAGGTACTGGAGGAGCTGCACTTCCAGCCACCCCAGGCACAACGTCT
GTGGCTAAGCTGGTGGGACTCTGCCCGCTTGGGCCTGCAGGCAGGTCTGACTGAGGACCGGCTC
CAGAGTGCCCTTTCTTACCTGCATGAGAGCGGCAAACTGCTCTATTTTGAGGATAGCCCGGCCC
TCAAGGAGCACGTCTTCCACAACCTCACCCGCCTCATTGACATCCTCAATGTTTTTTTCCAGAG
AGATGCTTCTTTGCTGCTTCATAAACTGCTCCTAGGGACCAACGGAGAGGGCGAGGGGGAGGGG
GAAAGTTTCCCCACCATAGCAGTGCCCACTCCGGGCCAGGACCCACTCCGGGCCACCCAGCTCC
ATCATTACGTGGAAGGCTTTTTGTTGCACGGGCTTCTGCCAGCTCATATCATTCGGTTGCTGCT
CAAGCCTCACGTCCAGGCCCAGCAGGACTTGCAGCTCCTGCTGGAGCTGCTGGAGAAGATGGGA
CTCTGTTACTGCCTCAATAAACCCAAAGGCAAGCCTTTGAACGGCTCCGCAGCTTGGTACAAGT
TCCCATGCTACGTGCAGAATGAGGTGCCCCACGCGGAGGCCTGGATTAATGGCACCAACCTAGC
CGGGCAGTCTTTTGTGGCTGAACAGTTGCAGATCGAATACAGTTTTCCCTTTACCTTCCCACCT
GGATTGTTTGCACGTTACAGTGTTCAGATCAACAGCCACGTGGTGCACAGGTCGGATGGGAAAT
TTCAGATCTTTGCGTATCGAGGGAAAGTGCCCGTGGTGGTGAGCTACAGACCTGCCAAGGGGGT
CCTGCAGCCAGACACCCTATCCATCGCCAGCCATGCGTCGCTACCCAATATATGGACCGCATGG
CAAGCCATCACCCCTTTGGTAGAGGAACTGAATGTCCTACTTCAGGAATGGCCTGGACTACACT
ACACTGTGCACATCCTCTGTTCTAAGTGCCTTAAGAGAGGGTCGCCAAATCCACACGCTTTCCC
AGTAAATCCCAGGCAGAGCCTGAGGGACTGATGGTACCACCAGCATTGCCAGCACCGACACCAG
CATCATCACCGACTTGCTCTGAGACCTTTCAAAGCTAATCCTCCCTTTTGAGGGAGAAAGCTTC
CCTTTGTCCTAAGGATCACTGCGGTCTTGGTTATTTATTCGCTCCTCCTTTGGAAGGATCAAGG
TCATCAAGTCATTTCCAGCTTCCAGAGACTATGGACTGACTCTGAAGAAGACAGCACCAATTAG
AGTGGGTGTTGCCAAGCATATGCGACTACCACTGGCAGGTCTCTTTGTCGAGGGAGGCTTTGTT
GAGGTGTTTGCCTATTATTAGCCTATTAAATGTTGAGAGATTCAAAGAGTTAAA

hide sequence

RefSeq Acc Id:

XR_001841536

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	16	63,248,833 - 63,336,441 (-)	NCBI
mRatBN7.2	16	56,545,462 - 56,633,648 (-)	NCBI
Rnor_6.0	16	60,120,457 - 60,208,550 (-)	NCBI

Sequence:

show sequence

CGGGAGCTGGGCGCCGGCCGGAGTCCAGCGCGGCATGCAGCTGCGGGCTCCGGTACCGGCGTGA
GGGTTGTCGGCGCGGGCTCCGGCCATGGCTGGCAAGGACAGTGGCAACCTGAAGACGGTGAGGC
TGTGGCGGGACGCCGCCCTGCGCGCCAGGAAGCTGCGGAGCAACCTGCGCCAGCTCACGCTCAG
CTGCCCGGGGGCGGGAGGCGACTCACTCGAGTCCCCCGACGCCCCCCAGCTGGTGCTGCCGGCC
AACATCGGGGACATTGAGGTGCTGAACCTGGGGAACAACGGCCTCGAGGATGTGCCTGAAGGTC
TGGGGTCAGCTCTGGGCAGCCTTCGCGTCTTGGTCTTGCGCAGGAACCGCTTTGCCCGGCTGCC
CCCTGCGGTGGCGGAGCTAGGCCACCACCTTACCGAACTGGACGTAAGCCACAACCGGCTAACC
ATCCTGGGAGCCGAGGTGGTGAGCGCCCTAAGGGAGCTGCGCAAACTCAACCTGAGCCACAACC
AGCTGCCAGCCCTGCCTGCCCAGCTCGGTGCCCTCGCCCACCTGGAGGAGCTAGATGTCAGCTT
CAACCGGCTAGCGCATCTGCCAGATTCCTTCTCCTGCCTCAACCACCTACGTACCCTTGACGTG
GACCACAACCAACTCACCGCCTTTCCCCAGCAGCTGCTGCAGCTGGCTGCCCTGGAGGAGCTGG
ACGTATCCAGCAACCGGCTGCGAGGCCTACCTGAGGATATCAGTGCCCTGCGTGCCCTCAAGAT
TCTCTGGCTTAGCGGGGCCGAGCTTGGCACTCTGCCCAGCGGCTTCTGTGAGCTGGCCAGTTTG
GAGAGCCTCATGTTAGACAACAACGGGCTACAGGCTCTGCCCGACGAGTTCAGCCGTCTGCAAA
GGCTCAAAATGCTCAACCTTTCTTCCAACCTCTTCGAGGAGTTCCCCGCTGCGCTGCTGCCCCT
GGCTGGGCTGGAGGAGCTCTACCTTAGTCGCAATCAGCTCACCTCAGTGCCCTCTCTTATCGCC
GGGCTGGGCCGCCTTCTCACCTTGTGGCTGGATAATAACCGCATCCGCTACCTGCCAGACTCCA
TTGTGGAGCTGACTGGCCTGGAGGAGCTGGTGCTTCAAGGCAACCAGATCGCTGTTCTGCCTGA
CAACTTTGGCCAGCTCTCCCGGGTAGGTTTGTGGAAAATCAAGGACAACCCGCTGATTCAGCCC
CCTTACGAAGTCTGCATGAAGGGGATCCCTTATATCGCAGCCTACCAGAAGGAACTGGCTCATT
CTCAACCAGCGGTTCAGCCCCGTCTCAAGCTGCTCCTGATGGGCCACAAGGCTGCCGGAAAGAC
CCTGCTTCGACACTGCCTCACTGAGGACAAAGTGGAAGGAGGGCAAGGAGGAGGGGACAAGGAG
AAGAGCTACCTACCTTTCCCTCCCCTTGGGAGTAAGGGCATCGAGGTGACCAGCTGGACTGCGG
ACGCTTCCCGGGGCTTGCGGTTCATTGTGTATGACTTAGCTGGTGATGAAAGCTACGAGGTGAT
CCAGCCCTTCTTCCTCTCCCCAGGAGCCCTATATGTGCTCGTGGTCAACTTGGCCACCTATGAA
CCTCGTTGCTTTCCTACTACTGTGGGCTCCTTCCTGCATCGGGTGGGGGCCCGTGTGCCTCATG
CTGTGGTGTGTATTGTGGGCACACATGCTGACCTGTGTGGGGAGCGGGAGCTTGAGGAGAAGTG
TCTGGATATTCACCGACAGATTGCCCTGCAGGAGAAGCATGATGCAGAGGGCCTAAGCCATCTA
GCCAAGGTGGTTGATGAGGCCCTGGCTCGGGACTTCGAGCTACGCTCTGCCAGTCCCCATGCAG
CTTACTACGGTGTTTCAGACAAGAACCTTCGGAGACGCAAGGCCCATTTTCAGTACCTGCTTAA
CCACCGGCTGCAGATCCTCTCGCCCGTGTTGCCTGTGAGCTGCAGGGACCCCCTCCAACTGCAA
CGCCTTCGAGACAAGCTGCTCTCTGTAGCCGAGCACCGGGAAATCTTTCCCAACTTACACAGAG
TCCTGCCTCGGTCCTGGCAGGTACTGGAGGAGCTGCACTTCCAGCCACCCCAGGCACAACGTCT
GTGGCTAAGCTGGTGGGACTCTGCCCGCTTGGGCCTGCAGGCAGGTCTGACTGAGGACCGGCTC
CAGAGTGCCCTTTCTTACCTGCATGAGAGCGGCAAACTGCTCTATTTTGAGGATAGCCCGGCCC
TCAAGGAGCACGTCTTCCACAACCTCACCCGCCTCATTGACATCCTCAATGTTTTTTTCCAGAG
AGATGCTTCTTTGCTGCTTCATAAACTGCTCCTAGGGACCAACGGAGAGGGCGAGGGGGAGGGG
GAAAGTTTCCCCACCATAGCAGTGCCCACTCCGGGCCAGGACCCACTCCGGGCCACCCAGCTCC
ATCATTACGTGGAAGGCTTTTTGTTGCACGGGCTTCTGCCAGCTCATATCATTCGGTTGCTGCT
CAAGCCTCACGTCCAGGCCCAGCAGGACTTGCAGCTCCTGCTGGAGCTGCTGGAGAAGATGGGA
CTCTGTTACTGCCTCAATAAACCCAAAGGCAAGCCTTTGAACGGCTCCGCAGCTTGGTACAAGT
TCCCATGCTACGTGCAGAATGAGGTGCCCCACGCGGAGGCCTGGATTAATGGCACCAACCTAGC
CGGGCAGTCTTTTGTGGCTGAACAGTTGCAGATCGAATACAGTTTTCCCTTTACCTTCCCACCT
GGATTGTTTGCACGTTACAGTGTTCAGATCAACAGCCACGTGGTGCACAGGTCGGATGGGAAAT
TTCAGATCTTTGCGTATCGAGGGAAAGTGCCCGTGGTGGTGAGCTACAGACCTGCCAAGGGGGT
CCTGCAGCCAGACACCCTATCCATCGCCAGCCATGCGTCGCTACCCAATATATGGACCGCATGG
CAAGCCATCACCCCTTTGGTAGAGGAACTGAATGTCCTACTTCAGGAATGGCCTGGACTACACT
ACACTGTGCACATCCTCTGTTCTAAGTGCCTTAAGAGAGGGTCGCCAAATCCACACGCTTTCCC
AGGGGAGTTGCTGAGTCAGCCCAGGCCAGAAGGGGTGGCAGAGATCATCTGCCCCAAGAACGGC
AGCGAGCGCGTGAATGTGGCTTTGGTTTACCCACCTACACCGACTGTGATCAGCCCTTGTTCCA
AGTACCTTCGTACTTTCTTGGAAAATTAAGTGGAAAGGATAGTGCTTCTTCCCCTCTGCCACCA
TTTTTACTGTACCCAATCTGTGACTTTAGGAGCACCAAGTTTTAAGGGAAGAACGTTGGTGAGA
AGCACAGAAACCAGTGACATTCGTGGCTGTGGAATTTTCATGGCATTAACAGAGCATGGGACCG
ACTGGGACATCTTCTGCCCCTCACGAGCCTGCCATGCTCCCAAGCGCCTTCTGGGGCCCCAGAG
TGAAACCGTGCACCGCATCGGGGTGCTTGCAGAGGACCCTTGGAGGGGTTGGAGGGGGCTGGGA
AGATGGGGACAAACATGGAGCAAATGTTTCACAACCTGAACCTCAGAACTGTGATCCTCCAAGG
AGAGAGCTACTTGAAGAAAAGGGAAAAAAAAAGTTAACAGGCTTCTCAGGGATTGTGACTTCTG
TGTACACATGAGCCATAAAGCTCCAGGTCAGGCGGCAGTATTTAGAGCACTCAGATTTCAGTTC
TGTTCAATGTGAAGGAGGGATCAACTGACGTTCACCGCTGTCCCGTAACTAGTGTAAGATATGT
ATATGTTAATCTTTATTTTTATAATATGCAAATACATTTAAATTTATACAGTTTTGGCGCTTCT
AGCATTAGTTAACACTGGGTGCAATATTCTGCATGAGAACTGTGCCAAGACGGGGCTGATGCTT
CTAGTGTCAGACCTTTGGTTCTTTTCGTTGCCCTTTAGCCCACCTGCTTGACTGAAAAGGACAG
AGAAAGCTTCTCCCTGTCAGTCCGTCCAGGGGTAGGTGCAAGAATTCTAATAACCGCCAGGAGC
GTTCAGCCCATTGGCAGAGTCCCCTCCCATCTTTTCAGTGCACACCCTGCTTGCTAGTCACTGG
ACATGGTGGTAGAATGATGACTATTCTGTCCCTTCACATCACCACTACTGGGGCAGAGGGACAT
CCTAGAGGCCAAATGAGGTGAAGAATCTCTGAGAACCTGATTCTTGGAGCAACTTGCGATAATC
TGAGTTCAGTTCTAAATCTTGTAGCCGTTCTACTGCTATGCACCCCCCTCTCCCTGACCCCCCA
GCACAGTGTGCATGAGTTAGCAGGGCCCTCTGTGAACTCTCCATCTGACTATTGGCCTTCCTGG
AGGAACATCCGTTTCACGGAACTCCATCCCTCATTGGCTGTTTATTCATACAGAGCCACTTGGA
GGAAGTCTGCAGCCAAGGTCCTAGTAGAGCCCTTGTTTTGAAACCTCTAGGAGGTAAACATTTA
AAAACAAACTCCACACACTGCTCTCCAGTGGCCTCCTAGTTAGGACCAAACAGCCTTTGCTGCA
GTAGAGACGCAGTCTCTGAAGAACGTGAAGGCCTCTGTTTACATCTGCCTCTTCCGTGTGTTGA
CAGGAAGCATGTAAAACTGACTGTTCCCCACAAGAAAGGTGTGTCAGCTGGTCTTACTCTGTCG
CCTGCATTCTGAAGTATCGATTCTTAGAATGCCACAGCCCACACCGTCACCACAAATCTTTAAG
AGAAATGCAAGCAGGTCACTGCGCTCTTGAGAAATTACAGACTGATTCGTGTTGGATCTGTTCA
GTTGACTTCACTGCCCCCAGAGGCCGCTCTGTGGAGGCAATCTCTCAGAAATCAGAATCTAGTG
GGGATTGTCTCTCTTTTATGTTTCGAATACTTGAACACGGCAAGTCCAGTTTTAAAAATTTCTC
TTACCTTTCAGAACACAGTTGCAGGATGGGTGAGAATCTGGTTGATCTCTTCTGTCATAGTTCT
CATGTGTGTGTGTGTGCAAGTGTGAACCGAACAGTTTGCATTTCTATTGCTTCGTAGACCACTG
AATTATTGGGCAATAGTTTTTTGTTTTTGTTTTTTATTAATTGGCACCAGACAGTTCTGAAACT
GTCAAGTCAGCAAAGTCCAACTAGCTTTACAATGTCCTATATGACTTTGGGCTTACTCCCCAGA
GGGCCATGTCAAATAAAAATAAGGCCCCTTGGGTGAGCATACCCTGCAAATGGTTGCTATTTTC
ATAAACACAGATGCCCGTGTTCTGAATGCCTGCTACTTTCTGACAAGTGATGTTACATGTTGTT
ATCCGAACCCTAGAGAAGCACCGAGAATGAGGGAACCTTGGCGGTCACATGTGTTGTGGCCAAG
GTTGGCACGATCAGAGGGTCATGCACCCGAAAGAGCTCCAGCAAACTGTGAGAACTTGCCTCAG
TGTGTGGGGGAGAGGGCTGAGATACAGAAACACCTCTGCCCAAGAAGAATCTCAGCATCTGTGT
AGGAAATTCTGTTTCCTTATTTCACACCCGGGAAGACTCAGCGGCCAGCCGCTGAGGGGCCGCC
CATCCGCTAAGCACAAGAGGAATGCGTTCTACCCAAGGAGCCCCTCGCCTCTCACACGCGCTCC
AAGTTTGTTATGGTTTCTATTCTTACAACTCGTGGTATCAAAACCATTTCCTGGGATTGTTGAA
GTGCTGCCAGAGTAAATGGTTTCCCCCTTCTTTGGAAAAACAAAAACAAACAAAAACAAAAACA
AAAAAACCCCGACAGTGCTCATATTTGATGTGTGCACTGGACTCTTTTGAATGAATAAAGTGGA
AGGGCTTGATAGGATTCCAGTGGAGTGTGTGTTTTTTCATGCTGCAGTCTGTGAATTGTAACTG
TGGTTTCCCGGTTCATTGTCCTAACGGGGCAGAAATTTAAAAAAAAAAAAAAATCAATAAAAAC
ACAATGAAATGGTTAA

hide sequence

Protein Sequences


Protein RefSeqs	NP_001100786	(Get FASTA)	NCBI Sequence Viewer
	NP_001423493	(Get FASTA)	NCBI Sequence Viewer
	NP_001423494	(Get FASTA)	NCBI Sequence Viewer
	XP_006253286	(Get FASTA)	NCBI Sequence Viewer
	XP_006253289	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDM09196	(Get FASTA)	NCBI Sequence Viewer
	EDM09197	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000015203.4
	ENSRNOP00000080425
	ENSRNOP00000080425.1
	ENSRNOP00000081189
	ENSRNOP00000081189.1

RefSeq Acc Id:

NP_001100786 ⟸ NM_001107316

- Sequence:

show sequence

MAGKDSGNLKTVRLWRDAALRARKLRSNLRQLTLSCPGAGGDSLESPDAPQLVLPANIGDIEVL
NLGNNGLEDVPEGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSHNRLTILGAEVVS
ALRELRKLNLSHNQLPALPAQLGALAHLEELDVSFNRLAHLPDSFSCLNHLRTLDVDHNQLTAF
PQQLLQLAALEELDVSSNRLRGLPEDISALRALKILWLSGAELGTLPSGFCELASLESLMLDNN
GLQALPDEFSRLQRLKMLNLSSNLFEEFPAALLPLAGLEELYLSRNQLTSVPSLIAGLGRLLTL
WLDNNRIRYLPDSIVELTGLEELVLQGNQIAVLPDNFGQLSRVGLWKIKDNPLIQPPYEVCMKG
IPYIAAYQKELAHSQPAVQPRLKLLLMGHKAAGKTLLRHCLTEDKVEGGQGGGDKEKSYLPFPP
LGSKGIEVTSWTADASRGLRFIVYDLAGDESYEVIQPFFLSPGALYVLVVNLATYEPRCFPTTV
GSFLHRVGARVPHAVVCIVGTHADLCGERELEEKCLDIHRQIALQEKHDAEGLSHLAKVVDEAL
ARDFELRSASPHAAYYGVSDKNLRRRKAHFQYLLNHRLQILSPVLPVSCRDPLQLQRLRDKLLS
VAEHREIFPNLHRVLPRSWQVLEELHFQPPQAQRLWLSWWDSARLGLQAGLTEDRLQSALSYLH
ESGKLLYFEDSPALKEHVFHNLTRLIDILNVFFQRDASLLLHKLLLGTNGEGEGEGESFPTIAV
PTPGQDPLRATQLHHYVEGFLLHGLLPAHIIRLLLKPHVQAQQDLQLLLELLEKMGLCYCLNKP
KGKPLNGSAAWYKFPCYVQNEVPHAEAWINGTNLAGQSFVAEQLQIEYSFPFTFPPGLFARYSV
QINSHVVHRSDGKFQIFAYRGKVPVVVSYRPAKGVLQPDTLSIASHASLPNIWTAWQAITPLVE
ELNVLLQEWPGLHYTVHILCSKCLKRGSPNPHAFPGELLSQPRPEGVAEIICPKNGSERVNVAL
VYPPTPTVISPCSKYLRTFLEN

hide sequence

RefSeq Acc Id:

XP_006253286 ⟸ XM_006253224

- Peptide Label:

isoform X1

- Sequence:

show sequence

MAGKDSGNLKTVRLWRDAALRARKLRSNLRQLTLSCPGAGGDSLESPDAPQLVLPANIGDIEVL
NLGNNGLEDVPEGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSHNRLTILGAEVVS
ALRELRKLNLSHNQLPALPAQLGALAHLEELDVSFNRLAHLPDSFSCLNHLRTLDVDHNQLTAF
PQQLLQLAALEELDVSSNRLRGLPEDISALRALKILWLSGAELGTLPSGFCELASLESLMLDNN
GLQALPDEFSRLQRLKMLNLSSNLFEEFPAALLPLAGLEELYLSRNQLTSVPSLIAGLGRLLTL
WLDNNRIRYLPDSIVELTGLEELVLQGNQIAVLPDNFGQLSRVGLWKIKDNPLIQPPYEVCMKG
IPYIAAYQKELAHSQPAVQPRLKLLLMGHKAAGKTLLRHCLTEDKVEGGQGGGDKEKSYLPFPP
LGSKGIEVTSWTADASRGLRFIVYDLAGDESYEVIQPFFLSPGALYVLVVNLATYEPRCFPTTV
GSFLHRVGARVPHAVVCIVGTHADLCGERELEEKCLDIHRQIALQEKHDAEGLSHLAKVVDEAL
ARDFELRSASPHAAYYGVSDKNLRRRKAHFQYLLNHRLQILSPVLPVSCRDPLQLQRLRDKLLS
VAEHREIFPNLHRVLPRSWQVLEELHFQPPQAQRLWLSWWDSARLGLQAGLTEDRLQSALSYLH
ESGKLLYFEDSPALKEHVFHNLTRLIDILNVFFQRDASLLLHKLLLGTNGEGEGEGESFPTIAV
PTPGQDPLRATQLHHYVEGFLLHGLLPAHIIRLLLKPHVQAQQDLQLLLELLEKMGLCYCLNKP
KGKPLNGSAAWYKFPCYVQNEVPHAEAWINGTNLAGQSFVAEQLQIEYSFPFTFPPGLFARYSV
QINSHVVHRSDGKFQIFAYRGKVPVVVSYRPAKGVLQPDTLSIASHASLPNIWTAWQAITPLVE
ELNVLLQEWPGLHYTVHILCSKCLKRGSPNPHAFPGELLSQPRPEGVAEIICPKNGSERVNVAL
VYPPTPTVISPCSKKNVGEKHRNQ

hide sequence

RefSeq Acc Id:

XP_006253289 ⟸ XM_006253227

- Peptide Label:

isoform X2

- Sequence:

show sequence

MAGKDSGNLKTVRLWRDAALRARKLRSNLRQLTLSCPGAGGDSLESPDAPQLVLPANIGDIEVL
NLGNNGLEDVPEGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSHNRLTILGAEVVS
ALRELRKLNLSHNQLPALPAQLGALAHLEELDVSFNRLAHLPDSFSCLNHLRTLDVDHNQLTAF
PQQLLQLAALEELDVSSNRLRGLPEDISALRALKILWLSGAELGTLPSGFCELASLESLMLDNN
GLQALPDEFSRLQRLKMLNLSSNLFEEFPAALLPLAGLEELYLSRNQLTSVPSLIAGLGRLLTL
WLDNNRIRYLPDSIVELTGLEELVLQGNQIAVLPDNFGQLSRVGLWKIKDNPLIQPPYEVCMKG
IPYIAAYQKELAHSQPAVQPRLKLLLMGHKAAGKTLLRHCLTEDKVEGGQGGGDKEKSYLPFPP
LGSKGIEVTSWTADASRGLRFIVYDLAGDESYEVIQPFFLSPGALYVLVVNLATYEPRCFPTTV
GSFLHRVGARVPHAVVCIVGTHADLCGERELEEKCLDIHRQIALQEKHDAEGLSHLAKVVDEAL
ARDFELRSASPHAAYYGVSDKNLRRRKAHFQYLLNHRLQILSPVLPVSCRDPLQLQRLRDKLLS
VAEHREIFPNLHRVLPRSWQVLEELHFQPPQAQRLWLSWWDSARLGLQAGLTEDRLQSALSYLH
ESGKLLYFEDSPALKEHVFHNLTRLIDILNVFFQRDASLLLHKLLLGTNGEGEGEGESFPTIAV
PTPGQDPLRATQLHHYVEGFLLHGLLPAHIIRLLLKPHVQAQQDLQLLLELLEKMGLCYCLNKP
KGKPLNGSAAWYKFPCYVQNEVPHAEAWINGTNLAGQSFVAEQLQIEYSFPFTFPPGLFARYSV
QINSHVVHRSDGKFQIFAYRGKVPVVVSYRPAKGVLQPDTLSIASHASLPNIWTAWQAITPLVE
ELNVLLQEWPGLHYTVHILCSKCLKRGSPNPHAFPVNPRQSLRD

hide sequence

Ensembl Acc Id:

ENSRNOP00000015203 ⟸ ENSRNOT00000015203

Ensembl Acc Id:

ENSRNOP00000080425 ⟸ ENSRNOT00000108535

Ensembl Acc Id:

ENSRNOP00000081189 ⟸ ENSRNOT00000098060

Protein Domains

Roc

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-D3ZJL1-F1-model_v2	AlphaFold	D3ZJL1	1-1046	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1308812	AgrOrtholog
BioCyc Gene	G2FUF-11171	BioCyc
Ensembl Genes	ENSRNOG00000011431	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000015203.6	UniProtKB/TrEMBL
	ENSRNOT00000098060	ENTREZGENE
	ENSRNOT00000098060.2	UniProtKB/TrEMBL
	ENSRNOT00000108535	ENTREZGENE
	ENSRNOT00000108535.2	UniProtKB/TrEMBL
Gene3D-CATH	3.40.50.300	UniProtKB/TrEMBL
	3.80.10.10	UniProtKB/TrEMBL
	ROC domain from the Parkinson's disease-associated leucine-rich repeat kinase 2	UniProtKB/TrEMBL
InterPro	L_dom-like	UniProtKB/TrEMBL
	Leu-rich_rpt	UniProtKB/TrEMBL
	Leu-rich_rpt_typical-subtyp	UniProtKB/TrEMBL
	LRR_domain-containing	UniProtKB/TrEMBL
	P-loop_NTPase	UniProtKB/TrEMBL
	ROC_GTPase	UniProtKB/TrEMBL
KEGG Report	rno:306508	UniProtKB/TrEMBL
NCBI Gene	306508	ENTREZGENE
PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN	UniProtKB/TrEMBL
	PTHR48051	UniProtKB/TrEMBL
	RAS SUPPRESSOR PROTEIN 1	UniProtKB/TrEMBL
Pfam	LRR_1	UniProtKB/TrEMBL
	LRR_8	UniProtKB/TrEMBL
	Roc	UniProtKB/TrEMBL
PhenoGen	Mfhas1	PhenoGen
PRINTS	LEURICHRPT	UniProtKB/TrEMBL
PROSITE	LRR	UniProtKB/TrEMBL
	ROC	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000011431	RatGTEx
SMART	LRR_BAC	UniProtKB/TrEMBL
	LRR_SD22	UniProtKB/TrEMBL
	LRR_TYP	UniProtKB/TrEMBL
Superfamily-SCOP	L domain-like	UniProtKB/TrEMBL
	Polo-box domain	UniProtKB/TrEMBL
	SSF52540	UniProtKB/TrEMBL
UniProt	A0A8I5ZRZ8	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I5ZT22	ENTREZGENE, UniProtKB/TrEMBL
	A6IVM5	ENTREZGENE, UniProtKB/TrEMBL
	A6IVM6	ENTREZGENE, UniProtKB/TrEMBL
	D3ZJL1	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2021-06-07	Mfhas1	multifunctional ROCO family signaling regulator 1	Mfhas1	malignant fibrous histiocytoma amplified sequence 1	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-04-30	Mfhas1	malignant fibrous histiocytoma amplified sequence 1	Mfhas1_predicted	malignant fibrous histiocytoma amplified sequence 1 (predicted)	'predicted' is removed	2292626	APPROVED
2005-01-12	Mfhas1_predicted	malignant fibrous histiocytoma amplified sequence 1 (predicted)			Symbol and Name status set to approved	70820	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar