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Gene: Ikzf2 (IKAROS family zinc finger 2) Rattus norvegicus

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Symbol:

Ikzf2

Name:

IKAROS family zinc finger 2

RGD ID:

1308686

Description:

Predicted to enable DNA-binding transcription factor activity; RNA polymerase II cis-regulatory region sequence-specific DNA binding activity; and identical protein binding activity. Predicted to be involved in cochlear outer hair cell electromotile response; regulation of transcription by RNA polymerase II; and sensory perception of sound. Predicted to act upstream of or within positive regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. Orthologous to human IKZF2 (IKAROS family zinc finger 2); INTERACTS WITH 17beta-estradiol; alpha-Zearalanol; amphetamine.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

LOC301476; Zfpn1a2; zinc finger protein Helios; zinc finger protein, subfamily 1A, 2 (Helios)

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	IKZF2 (IKAROS family zinc finger 2)	HGNC	Ensembl, HomoloGene, Inparanoid, NCBI, OrthoDB, OrthoMCL, Panther
Mus musculus (house mouse):	Ikzf2 (IKAROS family zinc finger 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Ikzf2 (IKAROS family zinc finger 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	IKZF2 (IKAROS family zinc finger 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	IKZF2 (IKAROS family zinc finger 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Ikzf2 (IKAROS family zinc finger 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	IKZF2 (IKAROS family zinc finger 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	IKZF2 (IKAROS family zinc finger 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Ikzf2 (IKAROS family zinc finger 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Ikzf2 (IKAROS family zinc finger 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	UQCRC2 (ubiquinol-cytochrome c reductase core protein 2)	HGNC	OMA
Alliance orthologs ³
Homo sapiens (human):	IKZF2 (IKAROS family zinc finger 2)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Ikzf2 (IKAROS family zinc finger 2)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	ztf-16	Alliance	DIOPT (OMA\|SonicParanoid)
Danio rerio (zebrafish):	ikzf2	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	ikzf2	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	ikzf2	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoFinder\|PANTHER\|PhylomeDB)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	9	78,495,670 - 78,640,896 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	9	78,492,275 - 78,640,463 (-)	Ensembl				GRCr8
mRatBN7.2	9	71,046,038 - 71,191,296 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	9	71,042,440 - 71,190,867 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	9	79,540,029 - 79,684,499 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	9	84,668,896 - 84,813,364 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	9	83,057,327 - 83,201,968 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	9	76,621,230 - 76,771,017 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	9	76,621,230 - 76,768,806 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	9	76,401,302 - 76,550,479 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	9	68,436,877 - 68,585,545 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	9	68,498,043 - 68,644,480 (-)	NCBI		Celera
RGSC_v3.1	9	68,594,207 - 68,732,574 (-)	NCBI
Cytogenetic Map	9	q33	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

acute lymphoblastic leukemia (ISO)

adult T-cell leukemia/lymphoma (ISO)

COVID-19 (ISO)

ICHAD syndrome (ISO)

Immunodysregulation with variable immunodeficiency and autoimmunity (ISO)

lung non-small cell carcinoma (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(-)-epigallocatechin 3-gallate (ISO)

1,1-dichloroethene (ISO)

1,2-dimethylhydrazine (ISO)

17beta-estradiol (EXP,ISO)

2,3,7,8-tetrachlorodibenzodioxine (ISO)

2,4-dibromophenyl 2,4,5-tribromophenyl ether (ISO)

4,4'-diaminodiphenylmethane (ISO)

4,4'-sulfonyldiphenol (ISO)

4-hydroxyphenyl retinamide (ISO)

all-trans-retinoic acid (ISO)

alpha-Zearalanol (EXP)

amphetamine (EXP)

antimonite (ISO)

aristolochic acid A (ISO)

arsenite(3-) (ISO)

atrazine (EXP)

benzo[a]pyrene (ISO)

benzo[a]pyrene diol epoxide I (ISO)

bisphenol A (EXP,ISO)

Butylbenzyl phthalate (ISO)

cadmium dichloride (ISO)

CGP 52608 (ISO)

cisplatin (ISO)

clofibrate (ISO)

copper atom (EXP)

copper(0) (EXP)

Dibutyl phosphate (ISO)

dioxygen (ISO)

dipotassium bis[mu-tartrato(4-)]diantimonate(2-) trihydrate (ISO)

diuron (EXP)

dorsomorphin (ISO)

entinostat (ISO)

ethyl methanesulfonate (ISO)

formaldehyde (ISO)

FR900359 (ISO)

fulvestrant (ISO)

gallic acid (ISO)

gold atom (ISO)

gold(0) (ISO)

GSK-J4 (ISO)

lipopolysaccharide (ISO)

melphalan (ISO)

methotrexate (ISO)

methyl methanesulfonate (ISO)

methylmercury chloride (ISO)

naled (ISO)

niclosamide (ISO)

nitrofen (EXP)

okadaic acid (ISO)

paracetamol (EXP,ISO)

paraquat (EXP)

perfluorooctanoic acid (EXP)

pirinixic acid (ISO)

potassium bromate (ISO)

potassium chromate (ISO)

potassium dichromate (ISO)

S-(1,2-dichlorovinyl)-L-cysteine (ISO)

SB 431542 (ISO)

sodium arsenate (ISO)

sodium arsenite (ISO)

sulforaphane (ISO)

trichostatin A (ISO)

triphenyl phosphate (ISO)

triptonide (ISO)

valproic acid (ISO)

vincristine (ISO)

vorinostat (ISO)

zearalenone (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cochlear outer hair cell electromotile response (ISO)

DNA-templated transcription (IEA)

positive regulation of transcription by RNA polymerase II (IEA,ISO)

regulation of DNA-templated transcription (IEA)

sensory perception of sound (ISO)

Cellular Component

nucleus (IEA,ISO)

Molecular Function

DNA binding (IEA)

DNA-binding transcription factor activity (IEA,ISO)

identical protein binding (IEA,ISO)

metal ion binding (IEA)

protein binding (ISO)

zinc ion binding (IEA)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Rat ISS GO annotations from GOA human gene data--August 2006	GOA data from the GO Consortium
3.	Clinical significance of expanded Foxp3⁺ Helios⁻ regulatory T cells in patients with non-small cell lung cancer.	Muto S, etal., Int J Oncol. 2015 Dec;47(6):2082-90. doi: 10.3892/ijo.2015.3196. Epub 2015 Oct 12.
4.	GOA pipeline	RGD automated data pipeline
5.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
6.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:9560339

Genomics

Comparative Map Data

Ikzf2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	9	78,495,670 - 78,640,896 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	9	78,492,275 - 78,640,463 (-)	Ensembl				GRCr8
mRatBN7.2	9	71,046,038 - 71,191,296 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	9	71,042,440 - 71,190,867 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	9	79,540,029 - 79,684,499 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	9	84,668,896 - 84,813,364 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	9	83,057,327 - 83,201,968 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	9	76,621,230 - 76,771,017 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	9	76,621,230 - 76,768,806 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	9	76,401,302 - 76,550,479 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	9	68,436,877 - 68,585,545 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	9	68,498,043 - 68,644,480 (-)	NCBI		Celera
RGSC_v3.1	9	68,594,207 - 68,732,574 (-)	NCBI
Cytogenetic Map	9	q33	NCBI

IKZF2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	2	212,999,698 - 213,152,456 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	2	212,999,691 - 213,152,427 (-)	Ensembl			hg38	GRCh38
GRCh37	2	213,864,422 - 214,017,180 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	2	213,572,653 - 213,724,578 (-)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	2	213,696,849 - 213,840,564	NCBI
Celera	2	207,628,331 - 207,780,208 (-)	NCBI		Celera
Cytogenetic Map	2	q34	NCBI
HuRef	2	205,713,880 - 205,865,875 (-)	NCBI		HuRef
CHM1_1	2	213,870,566 - 214,022,519 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	2	213,416,757 - 213,633,302 (-)	NCBI		T2T-CHM13v2.0

Ikzf2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	1	69,570,382 - 69,726,510 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	1	69,570,373 - 69,726,404 (-)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	1	69,531,207 - 69,687,351 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	1	69,531,214 - 69,687,245 (-)	Ensembl			mm10	GRCm38
MGSCv37	1	69,577,781 - 69,732,534 (-)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	1	69,470,598 - 69,619,029 (-)	NCBI		MGSCv36	mm8
Celera	1	70,088,227 - 70,243,344 (-)	NCBI		Celera
Cytogenetic Map	1	C3	NCBI
cM Map	1	34.9	NCBI

Ikzf2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955457	2,608,894 - 2,755,455 (+)	Ensembl
ChiLan1.0	NW_004955457	2,608,892 - 2,763,036 (+)	NCBI	ChiLan1.0	ChiLan1.0

IKZF2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	13	115,622,820 - 115,773,953 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	2B	115,639,394 - 115,790,868 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	2B	100,255,430 - 100,407,395 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	2B	218,731,828 - 218,882,087 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	2B	218,737,506 - 218,882,087 (-)	Ensembl			panPan2	panpan1.1

IKZF2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	37	20,508,647 - 20,662,549 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	37	20,516,239 - 20,661,298 (-)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	37	21,387,600 - 21,542,297 (-)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	37	20,500,779 - 20,655,655 (-)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	37	20,504,445 - 20,653,695 (-)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	37	20,407,319 - 20,561,909 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	37	20,355,896 - 20,510,382 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	37	20,373,416 - 20,528,153 (-)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Ikzf2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405303	168,945,604 - 169,100,732 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936586	3,525,933 - 3,674,061 (+)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936586	3,522,614 - 3,676,070 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

IKZF2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	15	115,512,179 - 115,677,374 (-)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	15	115,512,160 - 115,677,503 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	15	127,875,632 - 127,901,288 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

IKZF2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	10	98,750,782 - 98,909,061 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	10	98,759,037 - 98,909,007 (-)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666040	100,492,927 - 100,649,376 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Ikzf2
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624765	3,017,571 - 3,164,136 (+)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624765	3,016,569 - 3,171,443 (+)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Ikzf2
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	4	143,297,280 - 143,434,990 (-)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Ikzf2
730 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	50
Count of miRNA genes:	41
Interacting mature miRNAs:	46
Transcripts:	ENSRNOT00000057849
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
2303170	Bp332	Blood pressure QTL 332	3.73	0.027	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	9	6714888	84474983	Rat
631656	Bp108	Blood pressure QTL 108	5.97	0.0001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	9	56047863	101047863	Rat
7411571	Bw138	Body weight QTL 138	14.3	0.001	body mass (VT:0001259)	body weight gain (CMO:0000420)	9	40029925	85029925	Rat
1582203	Gluco19	Glucose level QTL 19	3.3	0.001	blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	9	63376862	108376862	Rat
8662828	Vetf6	Vascular elastic tissue fragility QTL 6	3.9		artery integrity trait (VT:0010639)	patent ductus arteriosus score (CMO:0002566)	9	44458256	99506504	Rat
724515	Uae16	Urinary albumin excretion QTL 16	8		urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	9	65657365	108376720	Rat
1598834	Memor11	Memory QTL 11	2.5		exploratory behavior trait (VT:0010471)	average horizontal distance between subject and target during voluntary locomotion in an experimental apparatus (CMO:0002674)	9	44458256	85262605	Rat
70186	Niddm26	Non-insulin dependent diabetes mellitus QTL 26	3.87		blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	9	29567664	83835942	Rat
70218	Cm28	Cardiac mass QTL 28	8.3	0.0001	heart mass (VT:0007028)	heart wet weight (CMO:0000069)	9	41720295	86720295	Rat
724544	Uae9	Urinary albumin excretion QTL 9	4.5		urine albumin amount (VT:0002871)	urine albumin level (CMO:0000130)	9	64220169	109220169	Rat
2290450	Scl57	Serum cholesterol level QTL 57	4.15		blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	9	44458256	121768150	Rat
1578760	Cm53	Cardiac mass QTL 53	3.3	0.0001	heart mass (VT:0007028)	heart wet weight (CMO:0000069)	9	64220169	109220169	Rat
1581580	Uae34	Urinary albumin excretion QTL 34			urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	9	64220169	109220169	Rat
1581517	Bp284	Blood pressure QTL 284			arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	9	39220186	84220186	Rat
1300134	Bp185	Blood pressure QTL 185	3.73		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	9	68875497	121768150	Rat
731164	Uae25	Urinary albumin excretion QTL 25	3.5	0.0001	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	9	48718864	108376862	Rat
7411656	Foco26	Food consumption QTL 26	9.8	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	9	40029925	85029925	Rat
1598849	Memor17	Memory QTL 17	2.2		exploratory behavior trait (VT:0010471)	difference between duration of physical contact or close proximity of test subject and social stimulus during sample phase and test phase (CMO:0002678)	9	57460497	78547958	Rat
4889943	Bss90	Bone structure and strength QTL 90	4.1		tibia area (VT:1000281)	tibia-fibula cortical bone endosteal cross-sectional area (CMO:0001722)	9	54506504	99506504	Rat
1578757	Pur6	Proteinuria QTL 6	3.3	0.005	urine total protein amount (VT:0000032)	urine total protein excretion rate (CMO:0000756)	9	64220169	109220169	Rat
1641894	Alcrsp12	Alcohol response QTL 12			response to alcohol trait (VT:0010489)	brain neurotensin receptor 1 density (CMO:0002068)	9	34960590	79960590	Rat

Markers in Region

D9Rat10

Rat Assembly	Chr	Position (strand)	Source	JBrowse
GRCr8	9	78,547,769 - 78,547,958 (+)	Marker Load Pipeline
mRatBN7.2	9	71,098,157 - 71,098,346 (+)	MAPPER	mRatBN7.2
Rnor_6.0	9	76,677,448 - 76,677,636	NCBI	Rnor6.0
Rnor_5.0	9	76,457,337 - 76,457,525	UniSTS	Rnor5.0
RGSC_v3.4	9	68,492,870 - 68,493,058	UniSTS	RGSC3.4
RGSC_v3.4	9	68,492,869 - 68,493,058	RGD	RGSC3.4
Celera	9	68,553,309 - 68,553,497	UniSTS
RGSC_v3.1	9	68,639,852 - 68,640,040	RGD
RH 3.4 Map	9	647.6	RGD
RH 3.4 Map	9	647.6	UniSTS
RH 2.0 Map	9	669.8	RGD
SHRSP x BN Map	9	48.9598	RGD
FHH x ACI Map	9	45.67	RGD
Cytogenetic Map	9	q32	UniSTS

D9Rat175

Rat Assembly	Chr	Position (strand)	Source	JBrowse
GRCr8	9	78,612,980 - 78,613,111 (+)	Marker Load Pipeline
mRatBN7.2	9	71,163,378 - 71,163,509 (+)	MAPPER	mRatBN7.2
Rnor_6.0	9	76,742,828 - 76,742,958	NCBI	Rnor6.0
Rnor_5.0	9	76,522,717 - 76,522,847	UniSTS	Rnor5.0
RGSC_v3.4	9	68,558,159 - 68,558,289	UniSTS	RGSC3.4
RGSC_v3.4	9	68,558,158 - 68,558,289	RGD	RGSC3.4
Celera	9	68,618,477 - 68,618,607	UniSTS
RGSC_v3.1	9	68,705,140 - 68,705,271	RGD
SHRSP x BN Map	9	47.7998	UniSTS
SHRSP x BN Map	9	47.7998	RGD
Cytogenetic Map	9	q32	UniSTS

D9Rat172

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	9	71,075,798 - 71,076,004 (+)	MAPPER	mRatBN7.2
Rnor_6.0	9	76,655,112 - 76,655,317	NCBI	Rnor6.0
Rnor_5.0	9	76,434,987 - 76,435,192	UniSTS	Rnor5.0
RGSC_v3.4	9	68,470,072 - 68,470,279	RGD	RGSC3.4
RGSC_v3.4	9	68,470,073 - 68,470,278	UniSTS	RGSC3.4
Celera	9	68,530,938 - 68,531,143	UniSTS
RGSC_v3.1	9	68,616,742 - 68,617,414	RGD
SHRSP x BN Map	9	48.9699	UniSTS
SHRSP x BN Map	9	48.9699	RGD
Cytogenetic Map	9	q32	UniSTS

D9Got78

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	9	71,107,162 - 71,107,380 (+)	MAPPER	mRatBN7.2
Rnor_6.0	9	76,686,451 - 76,686,668	NCBI	Rnor6.0
Rnor_5.0	9	76,466,340 - 76,466,557	UniSTS	Rnor5.0
RGSC_v3.4	9	68,501,872 - 68,502,090	RGD	RGSC3.4
RGSC_v3.4	9	68,501,873 - 68,502,090	UniSTS	RGSC3.4
Celera	9	68,562,312 - 68,562,529	UniSTS
RGSC_v3.1	9	68,648,855 - 68,649,072	RGD
RH 3.4 Map	9	647.6	UniSTS
RH 3.4 Map	9	647.6	RGD
RH 2.0 Map	9	667.4	RGD
Cytogenetic Map	9	q32	UniSTS

RH134261

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	9	71,046,185 - 71,046,384 (+)	MAPPER	mRatBN7.2
Rnor_6.0	9	76,624,976 - 76,625,174	NCBI	Rnor6.0
Rnor_5.0	9	76,405,048 - 76,405,246	UniSTS	Rnor5.0
RGSC_v3.4	9	68,440,623 - 68,440,821	UniSTS	RGSC3.4
Celera	9	68,501,789 - 68,501,987	UniSTS
RH 3.4 Map	9	647.7	UniSTS
Cytogenetic Map	9	q32	UniSTS

RH140802

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	9	71,186,497 - 71,186,700 (+)	MAPPER	mRatBN7.2
Rnor_6.0	9	76,765,944 - 76,766,146	NCBI	Rnor6.0
Rnor_5.0	9	76,545,833 - 76,546,035	UniSTS	Rnor5.0
RGSC_v3.4	9	68,582,682 - 68,582,884	UniSTS	RGSC3.4
Celera	9	68,641,614 - 68,641,816	UniSTS
RH 3.4 Map	9	647.7	UniSTS
Cytogenetic Map	9	q32	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	165	84	83	52	92	52	6	349	192	11	144	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001106916	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006245119	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006245120	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006245121	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008767217	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008767218	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008767219	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039083325	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063266954	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063266955	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063266956	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063266957	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063266958	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063266959	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063266961	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	CH474044	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ227819	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000009	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000057849 ⟹ ENSRNOP00000054658

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	9	78,492,275 - 78,640,359 (-)	Ensembl
mRatBN7.2 Ensembl	9	71,042,440 - 71,189,361 (-)	Ensembl
Rnor_6.0 Ensembl	9	76,621,230 - 76,768,806 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000087779 ⟹ ENSRNOP00000069412

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	9	78,503,137 - 78,640,359 (-)	Ensembl
mRatBN7.2 Ensembl	9	71,053,521 - 71,189,361 (-)	Ensembl
Rnor_6.0 Ensembl	9	76,632,112 - 76,768,770 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000102104 ⟹ ENSRNOP00000087415

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	9	71,052,102 - 71,189,361 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000116112 ⟹ ENSRNOP00000093923

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	9	71,052,102 - 71,190,867 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000116708 ⟹ ENSRNOP00000091144

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	9	71,052,102 - 71,188,609 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000118462 ⟹ ENSRNOP00000081679

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	9	71,052,693 - 71,186,740 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000119011 ⟹ ENSRNOP00000079523

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	9	71,052,102 - 71,189,488 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000120140 ⟹ ENSRNOP00000091675

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	9	71,052,102 - 71,189,361 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000121577 ⟹ ENSRNOP00000111682

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	9	78,495,676 - 78,640,463 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000155133 ⟹ ENSRNOP00000109346

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	9	78,495,676 - 78,640,359 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000160705 ⟹ ENSRNOP00000101201

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	9	78,495,676 - 78,640,359 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000166250 ⟹ ENSRNOP00000101619

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	9	78,495,676 - 78,640,359 (-)	Ensembl

RefSeq Acc Id:

NM_001106916 ⟹ NP_001100386

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	78,495,676 - 78,640,359 (-)	NCBI
mRatBN7.2	9	71,046,060 - 71,190,759 (-)	NCBI
Rnor_6.0	9	76,621,230 - 76,768,806 (-)	NCBI
Rnor_5.0	9	76,401,302 - 76,550,479 (-)	NCBI
RGSC_v3.4	9	68,436,877 - 68,585,545 (-)	RGD
Celera	9	68,498,043 - 68,644,480 (-)	RGD

Sequence:

show sequence

AAACTTCTTTCTTTCTTTCTTCGTTTCTCTTCAGCCCGACATTGTCACCTCCTCTTTGAGGGGT
TAGAAGAAGCTGGGATCTCCCGACAGAGCTGGAAATGGTGATGAATGTTTTTTAATCAAAGGAC
AATTTCTTTTCACTGCACTTTGACTATGGAAACGGACGGAATTGATGGCTACATAACGTGTGAC
AATGAGCTTTCACCTGAAGGGGAGCAGGCCACCATGGCCATTGACCTCACTTCAAGCACACCCA
ATGGACAGCACGCCTCGCCAGGTCACATGACAAGCACAAATTCTGTAAAGCTGGAAATGCAGAG
TGATGAAGAGTGTGACAGGCAGCCCCTGAGCCGTGAGGACGAGATCAGGGGCCACGATGAGGGG
AGCAGCCTAGAAGATCCCCTAATTGAGAGCGGCGAGGTGGCCGACAACAGGAAAGTCCAGGACC
TTCAAGGCGAGGGAGGAATCCGGCTTCCGAATGGTAAACTGAAATGTGACGTCTGTGGCATGGT
TTGCATTGGGCCCAATGTGCTTATGGTACATAAACGGAGTCACACTGGTGAGCGGCCCTTCCAC
TGTAACCAGTGTGGAGCTTCTTTTACCCAGAAGGGCAACCTTCTGAGACACATAAAGTTACACT
CTGGAGAGAAGCCGTTCAAATGTCCTTTCTGTAGCTATGCTTGTAGAAGAAGGGACGCTCTCAC
AGGACACCTCAGGACCCACTCTGTGGGTAAACCTCACAAGTGTAACTACTGTGGCCGAAGCTAC
AAGCAGCGCAGCTCACTGGAGGAACACAAGGAACGCTGTCACAACTATCTCCAGAATGTCAGCA
TGGAGGCTGCCGGGCAGGTCATGAGTCACCATGTCCCGCCCATGGAAGATTGTAAGGAACAAGA
GCCTATCATGGACAACAATATTTCTCTGGTGCCTTTTGAGAGACCTGCTGTCATAGAGAAGCTC
ACGGCCAATATGGGAAAGCGCAAAAGCTCCACCCCGCAGAAGTTTGTGGGAATGAGACATCTAC
TGCCACTTGGACGTTCATGGCTTTGATCTGGAAGTTGCTGCAGTCTCCCAGTACGGTGCTGGAG
CCATGCCTACCACCATGCCTTCCTAGGGCTTCACAATCCAAGTAAGTACTCAGTTTTGGCCTTC
AATGAGTCTATTCTTTACCTCGTCTTCCTCTCTTTTTCTGTTTCTGTCTTACTTTCTTTGCTTT
TTTTTTCTTTGCCACCTCCCTACACTGTTTACTGTTTATTAATTTATATCAGA

hide sequence

RefSeq Acc Id:

XM_006245119 ⟹ XP_006245181

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	78,495,670 - 78,640,367 (-)	NCBI
mRatBN7.2	9	71,046,038 - 71,190,773 (-)	NCBI
Rnor_6.0	9	76,625,693 - 76,770,279 (-)	NCBI
Rnor_5.0	9	76,401,302 - 76,550,479 (-)	NCBI

Sequence:

show sequence

GCGAGCCCGGCCGGCGGGGGAGATGTGCTCGGGCTCCGCCGGATCGGTTTCTCGGGGTTTGACC
AGCTGTCCCGGGCTAACCCTGCTCCTCGCTGAAGATGGAGGAAGTAAAAACAGGATTACCCTTA
GCTACAGATCCACTGCCTTAGTTTCCACCACCAACTGCAGTGCACAAACACACGTTAGGCACAG
GAAAGAAAGAAAGAGAGAGAGGGAGAGGACACACTAACAGTAAACACAAACAAAAGGGTGATGG
GATTATTTTACTGCATGCACTGCTGAGCACTGCACTTTGACTATGGAAACGGACGGAATTGATG
GCTACATAACGTGTGACAATGAGCTTTCACCTGAAGGGGAGCAGGCCACCATGGCCATTGACCT
CACTTCAAGCACACCCAATGGACAGCACGCCTCGCCAGGTCACATGACAAGCACAAATTCTGTA
AAGCTGGAAATGCAGAGTGATGAAGAGTGTGACAGGCAGCCCCTGAGCCGTGAGGACGAGATCA
GGGGCCACGATGAGGGGAGCAGCCTAGAAGATCCCCTAATTGAGAGCGGCGAGGTGGCCGACAA
CAGGAAAGTCCAGGACCTTCAAGGCGAGGGAGGAATCCGGCTTCCGAATGGTAAACTGAAATGT
GACGTCTGTGGCATGGTTTGCATTGGGCCCAATGTGCTTATGGTACATAAACGGAGTCACACTG
GTGAGCGGCCCTTCCACTGTAACCAGTGTGGAGCTTCTTTTACCCAGAAGGGCAACCTTCTGAG
ACACATAAAGTTACACTCTGGAGAGAAGCCGTTCAAATGTCCTTTCTGTAGCTATGCTTGTAGA
AGAAGGGACGCTCTCACAGGACACCTCAGGACCCACTCTGTGGGTAAACCTCACAAGTGTAACT
ACTGTGGCCGAAGCTACAAGCAGCGCAGCTCACTGGAGGAACACAAGGAACGCTGTCACAACTA
TCTCCAGAATGTCAGCATGGAGGCTGCCGGGCAGGTCATGAGTCACCATGTCCCGCCCATGGAA
GATTGTAAGGAACAAGAGCCTATCATGGACAACAATATTTCTCTGGTGCCTTTTGAGAGACCTG
CTGTCATAGAGAAGCTCACGGCCAATATGGGAAAGCGCAAAAGCTCCACCCCGCAGAAGTTTGT
GGGGGAAAAGCTCATGCGATTCAGCTACCCAGATATTCATTTTGATATGAACTTAACGTACGAG
AAGGAGGCTGAGCTGATGCAGTCTCATATGATGGACCAAGCCATCAACAATGCAATCACCTACC
TTGGAGCTGAGGCCCTTCACCCTCTGATGCAGCACGCACCAAGCACAATCGCCGAGGTGGCCCC
AGTTATAAGCTCAGCTTATTCTCAGGTCTATCATCCAAACAGGATAGAAAGACCCATTAGCAGG
GAGACAGCTGATAGTCACGAGAACAACATGGATGGCCCCATCTCTCTCATCAGACCAAAGAGTC
GACCCCAGGAAAGAGAGGCCTCTCCCAGCAATAGCTGCCTCGATTCTACTGACTCAGAAAGCAG
CCATGATGACCGCCAGTCCTACCAAGGAAACCCTGCCTTAAATCCCAAGAGGAAACAAAGCCCA
CCTTACATGAAGGAGGATGTCAAGGCTTTGGATGCTACCAAGGCCCCCAAGGGCTCTCTGAAGG
ACATCTACAAGGTTTTCAACGGAGAAGGAGAACAGATAAGGGCCTTCAAGTGTGAGCACTGCCG
AGTCCTTTTCCTAGACCATGTCATGTACACCATTCACATGGGTTGCCATGGCTACCGGGACCCA
CTGGAATGCAACATCTGTGGCTACAGAAGCCAGGACCGCTACGAGTTTTCATCACACATTGTTC
GAGGGGAGCACACATTCCACTAGGCCTTTTCATTCCAAAGGGGACCCCTATGAAGAACTGCACA
TGAAGAAATACTGCACTTACAGTCCCACCTTCCCTCAGATGGTGACATGCTTACTTCTTCATGC
TGTCACTGTCTATATTTCTTATTTTGTGGACAAAATGTCATTTGCTCTGCCTAATTACAATAAG
GAAGAAACAAGAGAAAAGGGATGGGATGTTCACTGATAACTTGGCTTGTTTATTTCGTGAGCAT
TTAAAGCAGTTCATTTCGGCCATGCGTCCTTGCTAAGGCCTATCATGATTTAGGAGATCACTCA
GTTCATAGAGATTCCTCTAAGATATTCTGATTTGCCATTCATGTTCAGGATTATGATAGAAGGC
AGGAAAGTTGAGAGTTCTCTGGGTAGGATTTTGGGCAATTCAAAACAGTCTAAGTCATTTTACT
CTCAAAGAAGATGTTTCAAAATGTAAACCCATTTTATTTTCTGTTCTTAGAGATCATGGAACAC
AAACACGATGTTATTTTCCATAACTACAAGGATGAGTTGAATTGTTATGGGTTCTGTGTTTACC
TCCCCTACGGAATTTATAATTGAGTATGTTTTACACTGTATCCTATAGCAAAACTTTTAAACTA
CAGGTAGTCAAGGGCCACTATGATACATCTGAGGTCCTTTGATCTTATTTTTCTAAACTTGCGC
ACTGTTTTTCCATAGTTTTGATGACTGGCATTTTATAGACACCCTGGCAGCCTTACTTTTAACA
CCTGTAACAAATAGTATTTTTATGTAGTTTTCAGAATAACATATGTTCGCAAGAGTGGGTAAGA
GGCAGTCAGTAATTTCCAGGAAGAATTCTGCTTTTCACAATTTGAGATTGTTTTTTTTTTTTCT
TTTAAGCTGTAAGATGCCGGCAGCCTAGTATACATATTTGCTTCTAAAGGTGTGTTTACGATTG
TCACTTTATCAGCATTCAGTGTTAACCAGTCAGCAGAAAAGTGTAATTAGGCGAACAGTAGGGG
GAATTCCCACTCTAAGAACCCTTTTCTGGTATTTCTCTTCAAGCTGTGAGCAGTCAGTGTTCTA
TCATAGTTCATTCCTCTTTGACTCTTGGTATAGAAGGTCTTAAAGAGCCTTGCTAACAGCTGCT
TCCTCTGAAATCATGGAGCAACTGTTAATTGGACCTGAAAGTGCTCACCTGAACCCTGGAAGGT
CTTTTATTTACTAGGGCTATGTATTCCACTATTTCTTCAGTAATGTCATTGCCTTTGCTGGAGA
CAAAAGGGAACCTCTTTGTTACCAGAATAGCATAGTGCAGGTCAAACAAACAAACAGAAAGTTT
TCTGTCAGCCTTCCTGGAGCTGAGAATGTGACACTCTTCAGGAGAGGGTCCCGCACTTTAAAAA
TAAAAACAAAAAGTTCAACTCTAGAGGCCCTTATCAGAAATGAATCTCAACCCCTTAGTCAAGA
ATCTACTGTCTTCTCTTAATTTGCACATGACATATACTTCCATATTTCATGCTCAGGTTTTAAT
CCGATCGCTGCGAGTTCTCAGCTTTTCTTTTTCTTTCCGAAGTTCACTTGCATGTGTGGGTAGG
GTTGGAGCACACTGTCATCAAGGCATTTGGGGGAATCCATTTGGCAGATATATACATATACATA
TATATATATATATATATATATATATATATATAGATAGATAGAGAGAGAGAGAGCGAGCTGCTTG
TGTTAGAGGAAAAGAAGCCTGACCATAAGTGGATTATTTGACAGCCATTTGTAAATGCTGAAAG
GTCTTCTGGGAGGTAACACATAGCTGCTCCATCAGACCTTTGACTGTCATGCCAAAACCATGTT
TGCTGTGGGAAGTGTTAAGACTCAAGTAGTGTCCACCGATGAGCAACGTGTGTGCTCCTAACGT
GCGTGCTCCTAACGTGCTTCACAGGTTTCCTTCTGTTCATTTAAGCAACTTCCTAGCCCTACCG
TAGCCAGAGCCACGTAGTTCTGACTTGCTTCTTTTACTAACTCTTATCTTCGTTATTTCTGGAG
AAATATCCAAATGGTACCTTTACATGTAAGAGAATGCACCAAAAAAAAAAAGAGCTATATCAAA
TGCCAACTGTTGGGTTTTCCAAGTTTTGTTTTCGTATCCCTTGGTACATTGTGAAAACACAGTT
TACTCAGGGATAAAACATCTCGTCACGCCTTCCTTGTCCCCGTTTAGCCTGCACACTCTGGAAT
CACAGTGGAAAGGATATTTATTTCTGAATGAGGTAAATAAGTTTAAGGCTCATGACATTTTTGT
TTTAATGTAACTTAAGGAAGCATCCGGATGCCTGTCTGGGTGTTCGTTTTGGCTCATTGTGGAC
ACATGCAAGCGTCTGCTGTCAACTTTCCTTCTCTCTGCTCGCACCTACTGTGTTAACAATCATG
CACCTATCTGCCCTAGGACGAAACTGACTTTAGGTGTACTGAAAGAGTCGTGTCCTTCCCCCAC
AAAGGTGGTACCGACGTGCTCTGCCTTTCTGATCCCATTTTATTGGAAAACCTGATTTATTCAG
AGGAGTGAGCTATAAGGGTTTATTGGTTGTACATACACACTTAGCATTTTTTTTCAGCTGCATG
GCACAAGGTACAGATAAAAGTAGATAGCTCTGATGTGACAGGGACAAATGAGGGCAAAGTGAAC
CCAAGACTCGTGAGTTACTATAAACTCTGTGGACCCTCAGTGACGGTCACACTTGCTTCTGTTT
CACCAAAGAGAATAGGAGACACGGTAGCACCTAAAAGTAAGCATGATGGCCAGATACCAAATAA
ATCAAATTTACATAACCGTCACAAGACCAGTTTACTTAGGTGAAATGTCACCCTTGAGAGAGGA
TTTGAGGGCATGAAAATGGGTTACCCTCTGTGTTTTCCAGTTTGTCGGGAATTTAACAGATGGC
TCTGCCCTCATTTTGCCCAAATTATTATTATTATTTTTGATCTCCAGTTCCTTCTGGAGAAACA
TGCTGCCTCCCGGTAACCGTGATGAATTGCTTGTTATAAAGGCTTTTTAGAGCAGTGAGAACAG
CCAGCATGATGAGCGGTGGAGGGAAACACTGTCATTCAAACATTCCATTAAGAAGTGTCTGGAT
AAAATGGGGATATGAGGGCCGACCATTAAGATTTAGGACGAAGTCGCCTGGCTGGCTGGCATGC
GTACAGGTCAGTGTTTGAATGCAGTATAGTTCACATGCACATGTGTATTGCACATTCTTTTAAT
AAAAATTCACAGAAAAGAAGCAGTTAGAAATCACCAGTTGTGTTGCAAAGGCATAGAGTTAGAA
GTACAGTCCAGCAGGTGTATTAGGAAAGCCCAAAGTTGTCCATGTGTCTTTAAGACTAATGGCC
ATTTAAATCGCGAATCTCCATTGCCTGCATCGAGAAAAACAAAGCAAAGGGAATGCAATGAAAC
AGTGAAAGGGTATTAAGTTGGCTGGTGGATATTTGAAGAAGTACCAATTCTTTTCCGAGTGGAA
GAAAATGCAGGAAATGACTTAGCAACTTTGGCTTGTATGCGTGATTTCCTGTCCAGTGGTACAC
CTCACAAGTTTGTAGTTTCCAAGACTTCATCTTCTCTCCAAAATGCTAAGTCAGGGTAGAAAGG
TGTGCTGAAGAGGCCCGAAAGCACCAGGAGAGCGTCTGTCCTAGATTCAGGACAGCACGTACAC
TATCCAAGTCACCTGCTGTAGTGTTTCAGCCTGGGATTATTCTTTTTACTATAAAATTGTAGAC
TGGTGGTCATCGGCAGTTGTATTTCATGTTATTTCAATAACTACTGTCTGTATAATTATTCTAC
AGCAGACGCTCCCCCAGGTCCAAAAAGGGAAAAAAGTGAGGGGTGAATTGAAACTTTGTATATA
TAAAAGTTATTTTATAAATATTTTAGTCTTCCAGTTTCTGCAAAATAATTAAAATATACAGTAA
CTGGTCTCTTAACCCCTGAATTTAATGTATTAAATACTTATAAAATTTTATATTGGTGCCTTTT
AAAAATGCATTGAGAGTGCTGGGTAGCTGTTTGGCTCCACCACACTTGGACTGTGTATTTTTTA
AGAAAAAAAAAATCACATAAAATCTAAGTACTCTCTAATTCACCTTTGTGTTCTTAGAAAAAAA
GAAAGGAAAAAAGCTGCTAAAAGACTTTACCAGACTTTTAGCTGAGCTGGCAAATGTGACAAGA
AACTTTGAAACCAGATTTTAATCTTTTTGGCTTGATGGTATTTCTGGACACTATTCTGTCGGGG
CAAAATTGTAGACTCACATGTCAGCAGTGAATTGGATTATGCTATGTGGTTTAATTTATTCTTG
AGGAAGAATATGTTTTGCATCACACAGGGGGTTCTTTGTATAATTTGGAGTCAATAATTACAGT
ATTGTTTTGCTTTAAAAAAATGCCCGACTGGTGTTGCTCTAGTCTTGGGTCTTCTGTCTTCTAA
CCTGTAGTTGTTTGGTGGAATGGTGTGCAAATGTGGACCATTGTTTCCTCCTGAACAAAACAAA
GCTCAGCTCTCAAGTCCCATGACTCCAAAGTGTCATCTCAGATGTTTAACGCGGGGTTGTCTGT
CACTTTGTGAAGGGTGTCTTCGACTATGACAACTTTGTAAAAAACGAGCTGCTGGTTTTACAAA
GTAGACATCATATGACCAAGAAGCTGTGATGTGCTAGTGTTTCTTTCCGTCATAGTGTACTCTT
AGGCCAAATAATGACACCTTGAATATTTTTACATTTATTACAGAGACCTAAAATTTTGGAATTC
TAAAAGGTTTTTATGTAATGCTCTATCTTACAGCAGTTTTCTCTTCTCTTGCTGTACTGTGAGT
CTGTGCGTATTTTTTTCTTACGCACCCTTGGAAATGAGTTTTTAGTTCTGTTTATGGTGTTTCT
CTCCCATACACTCGTTTATATACGTTCTGTACACATTTCTTATGAAGCCACCTTTCTTGTGCAT
AGACAAGTGACAAGTACATGAACCACTAGTTCCCTAAGATGACTTTTATATTATGAATTAATAT
GAAATTTATAGATCATGTGCTAAGCCCCATTAAGTGCAGAATAAAAACTTCCTATAGGTCCAAA
TAAGCCAGTGTGCACTGAATTGGGCCTTCAGTTTACCTCGAGTGACACGAAGTAAGGAAAGCTT
GGGCAGATGGCGGTCCCTCTAGCCAGCACCATACACTTACTAGCATGTCGCTGAGTCTCATTTA
CTGGGAATGGATTTTTAAAGGAATACACTGGAAGGAGGGAAGGGATCGGGGGACTTCTGGTGTT
TTTGTGGTTGCTTTGTCCTTTTTAAAATGTTGTTCAAATTGTGGAACTGTGATCTAAAAACATT
TAGACTGAGGAGCACCGGAGAGGATGTCCGTCAATCACTTGCCCTTCTGTACCGCTAAGTTCTG
GTTTCGCCTCTCCCTTCCTCTCACCTCCTCATCCCCACTCTGTATGTAGCCCTCCTCGCCATTG
CTTCTCCATGTCTCTCTCGACCCTCCTACTAGTTAGGAGGGCAACTCTGAACTTCCGACTCATG
AAGTCTTAACTTTTTGTCTCAGTGGTTTTTGTTAGCTGTGTAGTCTGCTGGCGTATTTTTATAC
CCTAGTGGAGTTTTGTATTTCCAAAGCGTGGTTGGGTTGACATGGTAAGCTGTATAGTCCTTAC
CTTGCTTCATCCTCAAGTAGGAGGCACGGAACATGACTCCAGCAATTCTGGAATCGGAGTATCC
GTCTGGCTCCTTTGTGCTTGGATTCTGACTTGTTTGGCTTTCTTCTTAAATACAAATCATAAGA
GAGTAGACTCCCCCATCCCCACCAAACACTGAGAGGATAAAAACGGAAAGCAAGAGTCTTAACT
TTCTCCCAACGGGGTGCGGGGAGGGGCGAGTGCTTTAACACTTCTGAGTGATATTTCAGGTTCA
GAAGGGGTCCCCAGACCCCTCGCGCTCACCATCGGGTCCCTTGGACCCTGTGCTATTTGCAGCT
TCAGAATGGTTACTTTTGTGATGGAGTTTAACTGCTATTCTTTTTTTCCCCATAAAAGTGCAAT
ACCCCTCTTGAAGTCTTAAAAACTATGGTAATTTTCTTCTTTTCTCTTTCTGACATTTGTTTCT
TTTACCAATGATGAAAAGAAACCATTGGAAATTGTAACATGTCATAGGACATAACAAGCAAAAA
TGAAAAACCACTCCACTATGAAAAGCTGAAAAAAAAAATGTAACAAATGACTTCTCTGACTTTC
TGGAAACTTCGTTTAGGCTAAATTGCCTTGGAAATCATGAGTGAGAAGTTTATCCTGAGGCTGA
AATATGATTTTTCTCCCACTCTTGTCTAATGCTCTTAAGTTAAATAACTAATATTTAATGTTTT
CATTTCTCTCCTTTTGGAATATAAATATCAAAGCACTTAGGTCAGGTTTAAATCAATATTACCT
GTTGAAGAAAAATTTTTTACATATTTAAAGCAGACCTGTTTCAATGCAGATGGAGAAGTATCTT
TTGTATTATCCATATTTATATGTAGTGTGCTCTTTTTTTAATACCTGTGTTTCTGTAGTAAGAC
TGCTGTATTGTAAATACACGTTTTATTAAAAAGTAACATTTCTTTGGCA

hide sequence

RefSeq Acc Id:

XM_006245120 ⟹ XP_006245182

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	78,495,670 - 78,640,896 (-)	NCBI
mRatBN7.2	9	71,046,038 - 71,191,296 (-)	NCBI
Rnor_6.0	9	76,625,693 - 76,771,017 (-)	NCBI
Rnor_5.0	9	76,401,302 - 76,550,479 (-)	NCBI

Sequence:

show sequence

GATTTCAAACTTAAACCACCCAGACTACACAGTTCAGTATTTCCAGCTCCTTTCATTTTCCTTT
TCCCTTTAATTATAGAAGTCTCTATTCCTTTTTCTGTGGTCAAGAAAGATAGTAAATGCTGCTA
TTTGTAGATTGAGCATGCATTTGTTTTTCTCAGGACGATTCCTATACTCTTCCCCCACCCCGGG
CAAACCAAACGTCTTGATTGGCATAAGGCTAGGCTACACTTCCAGGCTGACAACTTTTTTCGAC
CCTCACGGTTCCTTTGAAGACTCGGGTGGATGTGGCACACGCCGAGACGGAGGCAGATATAAAC
AGCAAGTAAACACTCTAATTTTAAACTTGCACTGGAAAGCACTTTCACAATGGGGACAGTGGCG
CTTGCTCCCTGGTCTCCCAGCGCACTCGCGAGGGCCCCTCTGCCCGGCTCAGTGTCCCAGGTCC
TCCGGGTGCCGGGAGCCGGGATTCTGGGGAGGTGCCGGGCCAGATAGAAAACTTCCCGCGGCCG
ACATGAGCTGGAGGAGCCCGCGACCGTCCCTCCCGCGCGGCCAGCGGAGAACCACTGCACTTTG
ACTATGGAAACGGACGGAATTGATGGCTACATAACGTGTGACAATGAGCTTTCACCTGAAGGGG
AGCAGGCCACCATGGCCATTGACCTCACTTCAAGCACACCCAATGGACAGCACGCCTCGCCAGG
TCACATGACAAGCACAAATTCTGTAAAGCTGGAAATGCAGAGTGATGAAGAGTGTGACAGGCAG
CCCCTGAGCCGTGAGGACGAGATCAGGGGCCACGATGAGGGGAGCAGCCTAGAAGATCCCCTAA
TTGAGAGCGGCGAGGTGGCCGACAACAGGAAAGTCCAGGACCTTCAAGGCGAGGGAGGAATCCG
GCTTCCGAATGGTAAACTGAAATGTGACGTCTGTGGCATGGTTTGCATTGGGCCCAATGTGCTT
ATGGTACATAAACGGAGTCACACTGGTGAGCGGCCCTTCCACTGTAACCAGTGTGGAGCTTCTT
TTACCCAGAAGGGCAACCTTCTGAGACACATAAAGTTACACTCTGGAGAGAAGCCGTTCAAATG
TCCTTTCTGTAGCTATGCTTGTAGAAGAAGGGACGCTCTCACAGGACACCTCAGGACCCACTCT
GTGGGTAAACCTCACAAGTGTAACTACTGTGGCCGAAGCTACAAGCAGCGCAGCTCACTGGAGG
AACACAAGGAACGCTGTCACAACTATCTCCAGAATGTCAGCATGGAGGCTGCCGGGCAGGTCAT
GAGTCACCATGTCCCGCCCATGGAAGATTGTAAGGAACAAGAGCCTATCATGGACAACAATATT
TCTCTGGTGCCTTTTGAGAGACCTGCTGTCATAGAGAAGCTCACGGCCAATATGGGAAAGCGCA
AAAGCTCCACCCCGCAGAAGTTTGTGGGGGAAAAGCTCATGCGATTCAGCTACCCAGATATTCA
TTTTGATATGAACTTAACGTACGAGAAGGAGGCTGAGCTGATGCAGTCTCATATGATGGACCAA
GCCATCAACAATGCAATCACCTACCTTGGAGCTGAGGCCCTTCACCCTCTGATGCAGCACGCAC
CAAGCACAATCGCCGAGGTGGCCCCAGTTATAAGCTCAGCTTATTCTCAGGTCTATCATCCAAA
CAGGATAGAAAGACCCATTAGCAGGGAGACAGCTGATAGTCACGAGAACAACATGGATGGCCCC
ATCTCTCTCATCAGACCAAAGAGTCGACCCCAGGAAAGAGAGGCCTCTCCCAGCAATAGCTGCC
TCGATTCTACTGACTCAGAAAGCAGCCATGATGACCGCCAGTCCTACCAAGGAAACCCTGCCTT
AAATCCCAAGAGGAAACAAAGCCCACCTTACATGAAGGAGGATGTCAAGGCTTTGGATGCTACC
AAGGCCCCCAAGGGCTCTCTGAAGGACATCTACAAGGTTTTCAACGGAGAAGGAGAACAGATAA
GGGCCTTCAAGTGTGAGCACTGCCGAGTCCTTTTCCTAGACCATGTCATGTACACCATTCACAT
GGGTTGCCATGGCTACCGGGACCCACTGGAATGCAACATCTGTGGCTACAGAAGCCAGGACCGC
TACGAGTTTTCATCACACATTGTTCGAGGGGAGCACACATTCCACTAGGCCTTTTCATTCCAAA
GGGGACCCCTATGAAGAACTGCACATGAAGAAATACTGCACTTACAGTCCCACCTTCCCTCAGA
TGGTGACATGCTTACTTCTTCATGCTGTCACTGTCTATATTTCTTATTTTGTGGACAAAATGTC
ATTTGCTCTGCCTAATTACAATAAGGAAGAAACAAGAGAAAAGGGATGGGATGTTCACTGATAA
CTTGGCTTGTTTATTTCGTGAGCATTTAAAGCAGTTCATTTCGGCCATGCGTCCTTGCTAAGGC
CTATCATGATTTAGGAGATCACTCAGTTCATAGAGATTCCTCTAAGATATTCTGATTTGCCATT
CATGTTCAGGATTATGATAGAAGGCAGGAAAGTTGAGAGTTCTCTGGGTAGGATTTTGGGCAAT
TCAAAACAGTCTAAGTCATTTTACTCTCAAAGAAGATGTTTCAAAATGTAAACCCATTTTATTT
TCTGTTCTTAGAGATCATGGAACACAAACACGATGTTATTTTCCATAACTACAAGGATGAGTTG
AATTGTTATGGGTTCTGTGTTTACCTCCCCTACGGAATTTATAATTGAGTATGTTTTACACTGT
ATCCTATAGCAAAACTTTTAAACTACAGGTAGTCAAGGGCCACTATGATACATCTGAGGTCCTT
TGATCTTATTTTTCTAAACTTGCGCACTGTTTTTCCATAGTTTTGATGACTGGCATTTTATAGA
CACCCTGGCAGCCTTACTTTTAACACCTGTAACAAATAGTATTTTTATGTAGTTTTCAGAATAA
CATATGTTCGCAAGAGTGGGTAAGAGGCAGTCAGTAATTTCCAGGAAGAATTCTGCTTTTCACA
ATTTGAGATTGTTTTTTTTTTTTCTTTTAAGCTGTAAGATGCCGGCAGCCTAGTATACATATTT
GCTTCTAAAGGTGTGTTTACGATTGTCACTTTATCAGCATTCAGTGTTAACCAGTCAGCAGAAA
AGTGTAATTAGGCGAACAGTAGGGGGAATTCCCACTCTAAGAACCCTTTTCTGGTATTTCTCTT
CAAGCTGTGAGCAGTCAGTGTTCTATCATAGTTCATTCCTCTTTGACTCTTGGTATAGAAGGTC
TTAAAGAGCCTTGCTAACAGCTGCTTCCTCTGAAATCATGGAGCAACTGTTAATTGGACCTGAA
AGTGCTCACCTGAACCCTGGAAGGTCTTTTATTTACTAGGGCTATGTATTCCACTATTTCTTCA
GTAATGTCATTGCCTTTGCTGGAGACAAAAGGGAACCTCTTTGTTACCAGAATAGCATAGTGCA
GGTCAAACAAACAAACAGAAAGTTTTCTGTCAGCCTTCCTGGAGCTGAGAATGTGACACTCTTC
AGGAGAGGGTCCCGCACTTTAAAAATAAAAACAAAAAGTTCAACTCTAGAGGCCCTTATCAGAA
ATGAATCTCAACCCCTTAGTCAAGAATCTACTGTCTTCTCTTAATTTGCACATGACATATACTT
CCATATTTCATGCTCAGGTTTTAATCCGATCGCTGCGAGTTCTCAGCTTTTCTTTTTCTTTCCG
AAGTTCACTTGCATGTGTGGGTAGGGTTGGAGCACACTGTCATCAAGGCATTTGGGGGAATCCA
TTTGGCAGATATATACATATACATATATATATATATATATATATATATATATATATAGATAGAT
AGAGAGAGAGAGAGCGAGCTGCTTGTGTTAGAGGAAAAGAAGCCTGACCATAAGTGGATTATTT
GACAGCCATTTGTAAATGCTGAAAGGTCTTCTGGGAGGTAACACATAGCTGCTCCATCAGACCT
TTGACTGTCATGCCAAAACCATGTTTGCTGTGGGAAGTGTTAAGACTCAAGTAGTGTCCACCGA
TGAGCAACGTGTGTGCTCCTAACGTGCGTGCTCCTAACGTGCTTCACAGGTTTCCTTCTGTTCA
TTTAAGCAACTTCCTAGCCCTACCGTAGCCAGAGCCACGTAGTTCTGACTTGCTTCTTTTACTA
ACTCTTATCTTCGTTATTTCTGGAGAAATATCCAAATGGTACCTTTACATGTAAGAGAATGCAC
CAAAAAAAAAAAGAGCTATATCAAATGCCAACTGTTGGGTTTTCCAAGTTTTGTTTTCGTATCC
CTTGGTACATTGTGAAAACACAGTTTACTCAGGGATAAAACATCTCGTCACGCCTTCCTTGTCC
CCGTTTAGCCTGCACACTCTGGAATCACAGTGGAAAGGATATTTATTTCTGAATGAGGTAAATA
AGTTTAAGGCTCATGACATTTTTGTTTTAATGTAACTTAAGGAAGCATCCGGATGCCTGTCTGG
GTGTTCGTTTTGGCTCATTGTGGACACATGCAAGCGTCTGCTGTCAACTTTCCTTCTCTCTGCT
CGCACCTACTGTGTTAACAATCATGCACCTATCTGCCCTAGGACGAAACTGACTTTAGGTGTAC
TGAAAGAGTCGTGTCCTTCCCCCACAAAGGTGGTACCGACGTGCTCTGCCTTTCTGATCCCATT
TTATTGGAAAACCTGATTTATTCAGAGGAGTGAGCTATAAGGGTTTATTGGTTGTACATACACA
CTTAGCATTTTTTTTCAGCTGCATGGCACAAGGTACAGATAAAAGTAGATAGCTCTGATGTGAC
AGGGACAAATGAGGGCAAAGTGAACCCAAGACTCGTGAGTTACTATAAACTCTGTGGACCCTCA
GTGACGGTCACACTTGCTTCTGTTTCACCAAAGAGAATAGGAGACACGGTAGCACCTAAAAGTA
AGCATGATGGCCAGATACCAAATAAATCAAATTTACATAACCGTCACAAGACCAGTTTACTTAG
GTGAAATGTCACCCTTGAGAGAGGATTTGAGGGCATGAAAATGGGTTACCCTCTGTGTTTTCCA
GTTTGTCGGGAATTTAACAGATGGCTCTGCCCTCATTTTGCCCAAATTATTATTATTATTTTTG
ATCTCCAGTTCCTTCTGGAGAAACATGCTGCCTCCCGGTAACCGTGATGAATTGCTTGTTATAA
AGGCTTTTTAGAGCAGTGAGAACAGCCAGCATGATGAGCGGTGGAGGGAAACACTGTCATTCAA
ACATTCCATTAAGAAGTGTCTGGATAAAATGGGGATATGAGGGCCGACCATTAAGATTTAGGAC
GAAGTCGCCTGGCTGGCTGGCATGCGTACAGGTCAGTGTTTGAATGCAGTATAGTTCACATGCA
CATGTGTATTGCACATTCTTTTAATAAAAATTCACAGAAAAGAAGCAGTTAGAAATCACCAGTT
GTGTTGCAAAGGCATAGAGTTAGAAGTACAGTCCAGCAGGTGTATTAGGAAAGCCCAAAGTTGT
CCATGTGTCTTTAAGACTAATGGCCATTTAAATCGCGAATCTCCATTGCCTGCATCGAGAAAAA
CAAAGCAAAGGGAATGCAATGAAACAGTGAAAGGGTATTAAGTTGGCTGGTGGATATTTGAAGA
AGTACCAATTCTTTTCCGAGTGGAAGAAAATGCAGGAAATGACTTAGCAACTTTGGCTTGTATG
CGTGATTTCCTGTCCAGTGGTACACCTCACAAGTTTGTAGTTTCCAAGACTTCATCTTCTCTCC
AAAATGCTAAGTCAGGGTAGAAAGGTGTGCTGAAGAGGCCCGAAAGCACCAGGAGAGCGTCTGT
CCTAGATTCAGGACAGCACGTACACTATCCAAGTCACCTGCTGTAGTGTTTCAGCCTGGGATTA
TTCTTTTTACTATAAAATTGTAGACTGGTGGTCATCGGCAGTTGTATTTCATGTTATTTCAATA
ACTACTGTCTGTATAATTATTCTACAGCAGACGCTCCCCCAGGTCCAAAAAGGGAAAAAAGTGA
GGGGTGAATTGAAACTTTGTATATATAAAAGTTATTTTATAAATATTTTAGTCTTCCAGTTTCT
GCAAAATAATTAAAATATACAGTAACTGGTCTCTTAACCCCTGAATTTAATGTATTAAATACTT
ATAAAATTTTATATTGGTGCCTTTTAAAAATGCATTGAGAGTGCTGGGTAGCTGTTTGGCTCCA
CCACACTTGGACTGTGTATTTTTTAAGAAAAAAAAAATCACATAAAATCTAAGTACTCTCTAAT
TCACCTTTGTGTTCTTAGAAAAAAAGAAAGGAAAAAAGCTGCTAAAAGACTTTACCAGACTTTT
AGCTGAGCTGGCAAATGTGACAAGAAACTTTGAAACCAGATTTTAATCTTTTTGGCTTGATGGT
ATTTCTGGACACTATTCTGTCGGGGCAAAATTGTAGACTCACATGTCAGCAGTGAATTGGATTA
TGCTATGTGGTTTAATTTATTCTTGAGGAAGAATATGTTTTGCATCACACAGGGGGTTCTTTGT
ATAATTTGGAGTCAATAATTACAGTATTGTTTTGCTTTAAAAAAATGCCCGACTGGTGTTGCTC
TAGTCTTGGGTCTTCTGTCTTCTAACCTGTAGTTGTTTGGTGGAATGGTGTGCAAATGTGGACC
ATTGTTTCCTCCTGAACAAAACAAAGCTCAGCTCTCAAGTCCCATGACTCCAAAGTGTCATCTC
AGATGTTTAACGCGGGGTTGTCTGTCACTTTGTGAAGGGTGTCTTCGACTATGACAACTTTGTA
AAAAACGAGCTGCTGGTTTTACAAAGTAGACATCATATGACCAAGAAGCTGTGATGTGCTAGTG
TTTCTTTCCGTCATAGTGTACTCTTAGGCCAAATAATGACACCTTGAATATTTTTACATTTATT
ACAGAGACCTAAAATTTTGGAATTCTAAAAGGTTTTTATGTAATGCTCTATCTTACAGCAGTTT
TCTCTTCTCTTGCTGTACTGTGAGTCTGTGCGTATTTTTTTCTTACGCACCCTTGGAAATGAGT
TTTTAGTTCTGTTTATGGTGTTTCTCTCCCATACACTCGTTTATATACGTTCTGTACACATTTC
TTATGAAGCCACCTTTCTTGTGCATAGACAAGTGACAAGTACATGAACCACTAGTTCCCTAAGA
TGACTTTTATATTATGAATTAATATGAAATTTATAGATCATGTGCTAAGCCCCATTAAGTGCAG
AATAAAAACTTCCTATAGGTCCAAATAAGCCAGTGTGCACTGAATTGGGCCTTCAGTTTACCTC
GAGTGACACGAAGTAAGGAAAGCTTGGGCAGATGGCGGTCCCTCTAGCCAGCACCATACACTTA
CTAGCATGTCGCTGAGTCTCATTTACTGGGAATGGATTTTTAAAGGAATACACTGGAAGGAGGG
AAGGGATCGGGGGACTTCTGGTGTTTTTGTGGTTGCTTTGTCCTTTTTAAAATGTTGTTCAAAT
TGTGGAACTGTGATCTAAAAACATTTAGACTGAGGAGCACCGGAGAGGATGTCCGTCAATCACT
TGCCCTTCTGTACCGCTAAGTTCTGGTTTCGCCTCTCCCTTCCTCTCACCTCCTCATCCCCACT
CTGTATGTAGCCCTCCTCGCCATTGCTTCTCCATGTCTCTCTCGACCCTCCTACTAGTTAGGAG
GGCAACTCTGAACTTCCGACTCATGAAGTCTTAACTTTTTGTCTCAGTGGTTTTTGTTAGCTGT
GTAGTCTGCTGGCGTATTTTTATACCCTAGTGGAGTTTTGTATTTCCAAAGCGTGGTTGGGTTG
ACATGGTAAGCTGTATAGTCCTTACCTTGCTTCATCCTCAAGTAGGAGGCACGGAACATGACTC
CAGCAATTCTGGAATCGGAGTATCCGTCTGGCTCCTTTGTGCTTGGATTCTGACTTGTTTGGCT
TTCTTCTTAAATACAAATCATAAGAGAGTAGACTCCCCCATCCCCACCAAACACTGAGAGGATA
AAAACGGAAAGCAAGAGTCTTAACTTTCTCCCAACGGGGTGCGGGGAGGGGCGAGTGCTTTAAC
ACTTCTGAGTGATATTTCAGGTTCAGAAGGGGTCCCCAGACCCCTCGCGCTCACCATCGGGTCC
CTTGGACCCTGTGCTATTTGCAGCTTCAGAATGGTTACTTTTGTGATGGAGTTTAACTGCTATT
CTTTTTTTCCCCATAAAAGTGCAATACCCCTCTTGAAGTCTTAAAAACTATGGTAATTTTCTTC
TTTTCTCTTTCTGACATTTGTTTCTTTTACCAATGATGAAAAGAAACCATTGGAAATTGTAACA
TGTCATAGGACATAACAAGCAAAAATGAAAAACCACTCCACTATGAAAAGCTGAAAAAAAAAAT
GTAACAAATGACTTCTCTGACTTTCTGGAAACTTCGTTTAGGCTAAATTGCCTTGGAAATCATG
AGTGAGAAGTTTATCCTGAGGCTGAAATATGATTTTTCTCCCACTCTTGTCTAATGCTCTTAAG
TTAAATAACTAATATTTAATGTTTTCATTTCTCTCCTTTTGGAATATAAATATCAAAGCACTTA
GGTCAGGTTTAAATCAATATTACCTGTTGAAGAAAAATTTTTTACATATTTAAAGCAGACCTGT
TTCAATGCAGATGGAGAAGTATCTTTTGTATTATCCATATTTATATGTAGTGTGCTCTTTTTTT
AATACCTGTGTTTCTGTAGTAAGACTGCTGTATTGTAAATACACGTTTTATTAAAAAGTAACAT
TTCTTTGGCA

hide sequence

RefSeq Acc Id:

XM_006245121 ⟹ XP_006245183

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	78,495,670 - 78,638,376 (-)	NCBI
mRatBN7.2	9	71,046,038 - 71,188,800 (-)	NCBI
Rnor_6.0	9	76,625,693 - 76,768,284 (-)	NCBI
Rnor_5.0	9	76,401,302 - 76,550,479 (-)	NCBI

Sequence:

show sequence

GGAGAAGGGAAGTGGTTTTGGAGACAAGAAGTGAAGCTGCCTGTTTTCCAGTAAGTAATGGAGA
AATTCCAGGAGCCAGGGCTAAATATACTTGGCGATCAATACAGAAATGGCTCATTGTGAATAAT
TTAGCTGCTGGTGCTGTGAGAGTTTTGAAACTAAAGGCAAAAAGGACCCGGGCCAAAGGGGGAA
AAATAAGTAAAAATCTTTTCAGGACTTGTCAATTCTTTAACTTTTTCCTTCAAAGAATGCAGTT
AGATTATCGATCTTCTCATTATGTGAATCAAAGCTAGGGGGTGTTGTCTCATACAATTTACTTT
TGTTTCTGGGGATTAAGTGCTGTTTTGTGCTATTGATGCATGAAAATCATTCCTCATACTTGGG
GGAGGAAAAAAATAGATCCCCTTGTGCACAGCCCAAAGTTTCTGAAACGTTGGAAATCCGAATG
TCTTAAGTAGGCTTGGCATTTGTCTCCAGCCATAGTCTGGCAGGAAATTAGGGTACGTTGAACA
GGTGCTTACACAGAATTTGGGGTAGGCTAAAATTTCAATACAAGCCAGAGTTGGCCAACTGCTG
CAAACGTCTTCAGGATGCAGTCTAGTACTAAGTGTTTTTGTTTTTGTTTTGTTTTCTTATGTTT
TGTTTGTTCTCTGCCCCCCCCCATCAGAACATGATGAACCAACTTGCAACAATTGTGAATAGAG
CTGTCTGTATACTAGGGAAGTAGTCAAACTGCAGGGCGATTGTGGGAAGTACTGATTGCTAAAA
TAGTTAGCTTGCAGTTAAAATTGGCAAATTCAAGATTACCCCCCTCCTATTTTTCCCCCCAATC
AAACAGCACTGCACTTTGACTATGGAAACGGACGGAATTGATGGCTACATAACGTGTGACAATG
AGCTTTCACCTGAAGGGGAGCAGGCCACCATGGCCATTGACCTCACTTCAAGCACACCCAATGG
ACAGCACGCCTCGCCAGGTCACATGACAAGCACAAATTCTGTAAAGCTGGAAATGCAGAGTGAT
GAAGAGTGTGACAGGCAGCCCCTGAGCCGTGAGGACGAGATCAGGGGCCACGATGAGGGGAGCA
GCCTAGAAGATCCCCTAATTGAGAGCGGCGAGGTGGCCGACAACAGGAAAGTCCAGGACCTTCA
AGGCGAGGGAGGAATCCGGCTTCCGAATGGTAAACTGAAATGTGACGTCTGTGGCATGGTTTGC
ATTGGGCCCAATGTGCTTATGGTACATAAACGGAGTCACACTGGTGAGCGGCCCTTCCACTGTA
ACCAGTGTGGAGCTTCTTTTACCCAGAAGGGCAACCTTCTGAGACACATAAAGTTACACTCTGG
AGAGAAGCCGTTCAAATGTCCTTTCTGTAGCTATGCTTGTAGAAGAAGGGACGCTCTCACAGGA
CACCTCAGGACCCACTCTGTGGGTAAACCTCACAAGTGTAACTACTGTGGCCGAAGCTACAAGC
AGCGCAGCTCACTGGAGGAACACAAGGAACGCTGTCACAACTATCTCCAGAATGTCAGCATGGA
GGCTGCCGGGCAGGTCATGAGTCACCATGTCCCGCCCATGGAAGATTGTAAGGAACAAGAGCCT
ATCATGGACAACAATATTTCTCTGGTGCCTTTTGAGAGACCTGCTGTCATAGAGAAGCTCACGG
CCAATATGGGAAAGCGCAAAAGCTCCACCCCGCAGAAGTTTGTGGGGGAAAAGCTCATGCGATT
CAGCTACCCAGATATTCATTTTGATATGAACTTAACGTACGAGAAGGAGGCTGAGCTGATGCAG
TCTCATATGATGGACCAAGCCATCAACAATGCAATCACCTACCTTGGAGCTGAGGCCCTTCACC
CTCTGATGCAGCACGCACCAAGCACAATCGCCGAGGTGGCCCCAGTTATAAGCTCAGCTTATTC
TCAGGTCTATCATCCAAACAGGATAGAAAGACCCATTAGCAGGGAGACAGCTGATAGTCACGAG
AACAACATGGATGGCCCCATCTCTCTCATCAGACCAAAGAGTCGACCCCAGGAAAGAGAGGCCT
CTCCCAGCAATAGCTGCCTCGATTCTACTGACTCAGAAAGCAGCCATGATGACCGCCAGTCCTA
CCAAGGAAACCCTGCCTTAAATCCCAAGAGGAAACAAAGCCCACCTTACATGAAGGAGGATGTC
AAGGCTTTGGATGCTACCAAGGCCCCCAAGGGCTCTCTGAAGGACATCTACAAGGTTTTCAACG
GAGAAGGAGAACAGATAAGGGCCTTCAAGTGTGAGCACTGCCGAGTCCTTTTCCTAGACCATGT
CATGTACACCATTCACATGGGTTGCCATGGCTACCGGGACCCACTGGAATGCAACATCTGTGGC
TACAGAAGCCAGGACCGCTACGAGTTTTCATCACACATTGTTCGAGGGGAGCACACATTCCACT
AGGCCTTTTCATTCCAAAGGGGACCCCTATGAAGAACTGCACATGAAGAAATACTGCACTTACA
GTCCCACCTTCCCTCAGATGGTGACATGCTTACTTCTTCATGCTGTCACTGTCTATATTTCTTA
TTTTGTGGACAAAATGTCATTTGCTCTGCCTAATTACAATAAGGAAGAAACAAGAGAAAAGGGA
TGGGATGTTCACTGATAACTTGGCTTGTTTATTTCGTGAGCATTTAAAGCAGTTCATTTCGGCC
ATGCGTCCTTGCTAAGGCCTATCATGATTTAGGAGATCACTCAGTTCATAGAGATTCCTCTAAG
ATATTCTGATTTGCCATTCATGTTCAGGATTATGATAGAAGGCAGGAAAGTTGAGAGTTCTCTG
GGTAGGATTTTGGGCAATTCAAAACAGTCTAAGTCATTTTACTCTCAAAGAAGATGTTTCAAAA
TGTAAACCCATTTTATTTTCTGTTCTTAGAGATCATGGAACACAAACACGATGTTATTTTCCAT
AACTACAAGGATGAGTTGAATTGTTATGGGTTCTGTGTTTACCTCCCCTACGGAATTTATAATT
GAGTATGTTTTACACTGTATCCTATAGCAAAACTTTTAAACTACAGGTAGTCAAGGGCCACTAT
GATACATCTGAGGTCCTTTGATCTTATTTTTCTAAACTTGCGCACTGTTTTTCCATAGTTTTGA
TGACTGGCATTTTATAGACACCCTGGCAGCCTTACTTTTAACACCTGTAACAAATAGTATTTTT
ATGTAGTTTTCAGAATAACATATGTTCGCAAGAGTGGGTAAGAGGCAGTCAGTAATTTCCAGGA
AGAATTCTGCTTTTCACAATTTGAGATTGTTTTTTTTTTTTCTTTTAAGCTGTAAGATGCCGGC
AGCCTAGTATACATATTTGCTTCTAAAGGTGTGTTTACGATTGTCACTTTATCAGCATTCAGTG
TTAACCAGTCAGCAGAAAAGTGTAATTAGGCGAACAGTAGGGGGAATTCCCACTCTAAGAACCC
TTTTCTGGTATTTCTCTTCAAGCTGTGAGCAGTCAGTGTTCTATCATAGTTCATTCCTCTTTGA
CTCTTGGTATAGAAGGTCTTAAAGAGCCTTGCTAACAGCTGCTTCCTCTGAAATCATGGAGCAA
CTGTTAATTGGACCTGAAAGTGCTCACCTGAACCCTGGAAGGTCTTTTATTTACTAGGGCTATG
TATTCCACTATTTCTTCAGTAATGTCATTGCCTTTGCTGGAGACAAAAGGGAACCTCTTTGTTA
CCAGAATAGCATAGTGCAGGTCAAACAAACAAACAGAAAGTTTTCTGTCAGCCTTCCTGGAGCT
GAGAATGTGACACTCTTCAGGAGAGGGTCCCGCACTTTAAAAATAAAAACAAAAAGTTCAACTC
TAGAGGCCCTTATCAGAAATGAATCTCAACCCCTTAGTCAAGAATCTACTGTCTTCTCTTAATT
TGCACATGACATATACTTCCATATTTCATGCTCAGGTTTTAATCCGATCGCTGCGAGTTCTCAG
CTTTTCTTTTTCTTTCCGAAGTTCACTTGCATGTGTGGGTAGGGTTGGAGCACACTGTCATCAA
GGCATTTGGGGGAATCCATTTGGCAGATATATACATATACATATATATATATATATATATATAT
ATATATATATAGATAGATAGAGAGAGAGAGAGCGAGCTGCTTGTGTTAGAGGAAAAGAAGCCTG
ACCATAAGTGGATTATTTGACAGCCATTTGTAAATGCTGAAAGGTCTTCTGGGAGGTAACACAT
AGCTGCTCCATCAGACCTTTGACTGTCATGCCAAAACCATGTTTGCTGTGGGAAGTGTTAAGAC
TCAAGTAGTGTCCACCGATGAGCAACGTGTGTGCTCCTAACGTGCGTGCTCCTAACGTGCTTCA
CAGGTTTCCTTCTGTTCATTTAAGCAACTTCCTAGCCCTACCGTAGCCAGAGCCACGTAGTTCT
GACTTGCTTCTTTTACTAACTCTTATCTTCGTTATTTCTGGAGAAATATCCAAATGGTACCTTT
ACATGTAAGAGAATGCACCAAAAAAAAAAAGAGCTATATCAAATGCCAACTGTTGGGTTTTCCA
AGTTTTGTTTTCGTATCCCTTGGTACATTGTGAAAACACAGTTTACTCAGGGATAAAACATCTC
GTCACGCCTTCCTTGTCCCCGTTTAGCCTGCACACTCTGGAATCACAGTGGAAAGGATATTTAT
TTCTGAATGAGGTAAATAAGTTTAAGGCTCATGACATTTTTGTTTTAATGTAACTTAAGGAAGC
ATCCGGATGCCTGTCTGGGTGTTCGTTTTGGCTCATTGTGGACACATGCAAGCGTCTGCTGTCA
ACTTTCCTTCTCTCTGCTCGCACCTACTGTGTTAACAATCATGCACCTATCTGCCCTAGGACGA
AACTGACTTTAGGTGTACTGAAAGAGTCGTGTCCTTCCCCCACAAAGGTGGTACCGACGTGCTC
TGCCTTTCTGATCCCATTTTATTGGAAAACCTGATTTATTCAGAGGAGTGAGCTATAAGGGTTT
ATTGGTTGTACATACACACTTAGCATTTTTTTTCAGCTGCATGGCACAAGGTACAGATAAAAGT
AGATAGCTCTGATGTGACAGGGACAAATGAGGGCAAAGTGAACCCAAGACTCGTGAGTTACTAT
AAACTCTGTGGACCCTCAGTGACGGTCACACTTGCTTCTGTTTCACCAAAGAGAATAGGAGACA
CGGTAGCACCTAAAAGTAAGCATGATGGCCAGATACCAAATAAATCAAATTTACATAACCGTCA
CAAGACCAGTTTACTTAGGTGAAATGTCACCCTTGAGAGAGGATTTGAGGGCATGAAAATGGGT
TACCCTCTGTGTTTTCCAGTTTGTCGGGAATTTAACAGATGGCTCTGCCCTCATTTTGCCCAAA
TTATTATTATTATTTTTGATCTCCAGTTCCTTCTGGAGAAACATGCTGCCTCCCGGTAACCGTG
ATGAATTGCTTGTTATAAAGGCTTTTTAGAGCAGTGAGAACAGCCAGCATGATGAGCGGTGGAG
GGAAACACTGTCATTCAAACATTCCATTAAGAAGTGTCTGGATAAAATGGGGATATGAGGGCCG
ACCATTAAGATTTAGGACGAAGTCGCCTGGCTGGCTGGCATGCGTACAGGTCAGTGTTTGAATG
CAGTATAGTTCACATGCACATGTGTATTGCACATTCTTTTAATAAAAATTCACAGAAAAGAAGC
AGTTAGAAATCACCAGTTGTGTTGCAAAGGCATAGAGTTAGAAGTACAGTCCAGCAGGTGTATT
AGGAAAGCCCAAAGTTGTCCATGTGTCTTTAAGACTAATGGCCATTTAAATCGCGAATCTCCAT
TGCCTGCATCGAGAAAAACAAAGCAAAGGGAATGCAATGAAACAGTGAAAGGGTATTAAGTTGG
CTGGTGGATATTTGAAGAAGTACCAATTCTTTTCCGAGTGGAAGAAAATGCAGGAAATGACTTA
GCAACTTTGGCTTGTATGCGTGATTTCCTGTCCAGTGGTACACCTCACAAGTTTGTAGTTTCCA
AGACTTCATCTTCTCTCCAAAATGCTAAGTCAGGGTAGAAAGGTGTGCTGAAGAGGCCCGAAAG
CACCAGGAGAGCGTCTGTCCTAGATTCAGGACAGCACGTACACTATCCAAGTCACCTGCTGTAG
TGTTTCAGCCTGGGATTATTCTTTTTACTATAAAATTGTAGACTGGTGGTCATCGGCAGTTGTA
TTTCATGTTATTTCAATAACTACTGTCTGTATAATTATTCTACAGCAGACGCTCCCCCAGGTCC
AAAAAGGGAAAAAAGTGAGGGGTGAATTGAAACTTTGTATATATAAAAGTTATTTTATAAATAT
TTTAGTCTTCCAGTTTCTGCAAAATAATTAAAATATACAGTAACTGGTCTCTTAACCCCTGAAT
TTAATGTATTAAATACTTATAAAATTTTATATTGGTGCCTTTTAAAAATGCATTGAGAGTGCTG
GGTAGCTGTTTGGCTCCACCACACTTGGACTGTGTATTTTTTAAGAAAAAAAAAATCACATAAA
ATCTAAGTACTCTCTAATTCACCTTTGTGTTCTTAGAAAAAAAGAAAGGAAAAAAGCTGCTAAA
AGACTTTACCAGACTTTTAGCTGAGCTGGCAAATGTGACAAGAAACTTTGAAACCAGATTTTAA
TCTTTTTGGCTTGATGGTATTTCTGGACACTATTCTGTCGGGGCAAAATTGTAGACTCACATGT
CAGCAGTGAATTGGATTATGCTATGTGGTTTAATTTATTCTTGAGGAAGAATATGTTTTGCATC
ACACAGGGGGTTCTTTGTATAATTTGGAGTCAATAATTACAGTATTGTTTTGCTTTAAAAAAAT
GCCCGACTGGTGTTGCTCTAGTCTTGGGTCTTCTGTCTTCTAACCTGTAGTTGTTTGGTGGAAT
GGTGTGCAAATGTGGACCATTGTTTCCTCCTGAACAAAACAAAGCTCAGCTCTCAAGTCCCATG
ACTCCAAAGTGTCATCTCAGATGTTTAACGCGGGGTTGTCTGTCACTTTGTGAAGGGTGTCTTC
GACTATGACAACTTTGTAAAAAACGAGCTGCTGGTTTTACAAAGTAGACATCATATGACCAAGA
AGCTGTGATGTGCTAGTGTTTCTTTCCGTCATAGTGTACTCTTAGGCCAAATAATGACACCTTG
AATATTTTTACATTTATTACAGAGACCTAAAATTTTGGAATTCTAAAAGGTTTTTATGTAATGC
TCTATCTTACAGCAGTTTTCTCTTCTCTTGCTGTACTGTGAGTCTGTGCGTATTTTTTTCTTAC
GCACCCTTGGAAATGAGTTTTTAGTTCTGTTTATGGTGTTTCTCTCCCATACACTCGTTTATAT
ACGTTCTGTACACATTTCTTATGAAGCCACCTTTCTTGTGCATAGACAAGTGACAAGTACATGA
ACCACTAGTTCCCTAAGATGACTTTTATATTATGAATTAATATGAAATTTATAGATCATGTGCT
AAGCCCCATTAAGTGCAGAATAAAAACTTCCTATAGGTCCAAATAAGCCAGTGTGCACTGAATT
GGGCCTTCAGTTTACCTCGAGTGACACGAAGTAAGGAAAGCTTGGGCAGATGGCGGTCCCTCTA
GCCAGCACCATACACTTACTAGCATGTCGCTGAGTCTCATTTACTGGGAATGGATTTTTAAAGG
AATACACTGGAAGGAGGGAAGGGATCGGGGGACTTCTGGTGTTTTTGTGGTTGCTTTGTCCTTT
TTAAAATGTTGTTCAAATTGTGGAACTGTGATCTAAAAACATTTAGACTGAGGAGCACCGGAGA
GGATGTCCGTCAATCACTTGCCCTTCTGTACCGCTAAGTTCTGGTTTCGCCTCTCCCTTCCTCT
CACCTCCTCATCCCCACTCTGTATGTAGCCCTCCTCGCCATTGCTTCTCCATGTCTCTCTCGAC
CCTCCTACTAGTTAGGAGGGCAACTCTGAACTTCCGACTCATGAAGTCTTAACTTTTTGTCTCA
GTGGTTTTTGTTAGCTGTGTAGTCTGCTGGCGTATTTTTATACCCTAGTGGAGTTTTGTATTTC
CAAAGCGTGGTTGGGTTGACATGGTAAGCTGTATAGTCCTTACCTTGCTTCATCCTCAAGTAGG
AGGCACGGAACATGACTCCAGCAATTCTGGAATCGGAGTATCCGTCTGGCTCCTTTGTGCTTGG
ATTCTGACTTGTTTGGCTTTCTTCTTAAATACAAATCATAAGAGAGTAGACTCCCCCATCCCCA
CCAAACACTGAGAGGATAAAAACGGAAAGCAAGAGTCTTAACTTTCTCCCAACGGGGTGCGGGG
AGGGGCGAGTGCTTTAACACTTCTGAGTGATATTTCAGGTTCAGAAGGGGTCCCCAGACCCCTC
GCGCTCACCATCGGGTCCCTTGGACCCTGTGCTATTTGCAGCTTCAGAATGGTTACTTTTGTGA
TGGAGTTTAACTGCTATTCTTTTTTTCCCCATAAAAGTGCAATACCCCTCTTGAAGTCTTAAAA
ACTATGGTAATTTTCTTCTTTTCTCTTTCTGACATTTGTTTCTTTTACCAATGATGAAAAGAAA
CCATTGGAAATTGTAACATGTCATAGGACATAACAAGCAAAAATGAAAAACCACTCCACTATGA
AAAGCTGAAAAAAAAAATGTAACAAATGACTTCTCTGACTTTCTGGAAACTTCGTTTAGGCTAA
ATTGCCTTGGAAATCATGAGTGAGAAGTTTATCCTGAGGCTGAAATATGATTTTTCTCCCACTC
TTGTCTAATGCTCTTAAGTTAAATAACTAATATTTAATGTTTTCATTTCTCTCCTTTTGGAATA
TAAATATCAAAGCACTTAGGTCAGGTTTAAATCAATATTACCTGTTGAAGAAAAATTTTTTACA
TATTTAAAGCAGACCTGTTTCAATGCAGATGGAGAAGTATCTTTTGTATTATCCATATTTATAT
GTAGTGTGCTCTTTTTTTAATACCTGTGTTTCTGTAGTAAGACTGCTGTATTGTAAATACACGT
TTTATTAAAAAGTAACATTTCTTTGGCA

hide sequence

RefSeq Acc Id:

XM_008767219 ⟹ XP_008765441

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	78,495,670 - 78,640,376 (-)	NCBI
mRatBN7.2	9	71,046,038 - 71,190,777 (-)	NCBI
Rnor_6.0	9	76,625,693 - 76,768,828 (-)	NCBI

Sequence:

show sequence

AGGGAAGGGGGGGGGACACAAAAAACTTCTTTCTTTCTTTCTTCGTTTCTCTTCAGCCCGACAT
TGTCACCTCCTCTTTGAGGGGTTAGAAGAAGCTGGGATCTCCCGACAGAGCTGGAAATGGTGAT
GAATGTTTTTTAATCAAAGGACAATTTCTTTTCACTGCACTTTGACTATGGAAACGGACGGAAT
TGATGGCTACATAACGTGTGACAATGAGCTTTCACCTGAAGGGGAGCAGGCCACCATGGCCATT
GACCTCACTTCAAGCACACCCAATGGACAGCACGCCTCGCCAGGTCACATGACAAGCACAAATT
CTGTAAAGCTGGAAATGCAGAGTGATGAAGAGTGTGACAGGCAGCCCCTGAGCCGTGAGGACGA
GATCAGGGGCCACGATGAGGGGAGCAGCCTAGAAGATCCCCTAATTGAGAGCGGCGAGGTGGCC
GACAACAGGAAAGTCCAGGACCTTCAAGGCGAGGGAGGAATCCGGCTTCCGAATGGTGAGCGGC
CCTTCCACTGTAACCAGTGTGGAGCTTCTTTTACCCAGAAGGGCAACCTTCTGAGACACATAAA
GTTACACTCTGGAGAGAAGCCGTTCAAATGTCCTTTCTGTAGCTATGCTTGTAGAAGAAGGGAC
GCTCTCACAGGACACCTCAGGACCCACTCTGTGGGTAAACCTCACAAGTGTAACTACTGTGGCC
GAAGCTACAAGCAGCGCAGCTCACTGGAGGAACACAAGGAACGCTGTCACAACTATCTCCAGAA
TGTCAGCATGGAGGCTGCCGGGCAGGTCATGAGTCACCATGTCCCGCCCATGGAAGATTGTAAG
GAACAAGAGCCTATCATGGACAACAATATTTCTCTGGTGCCTTTTGAGAGACCTGCTGTCATAG
AGAAGCTCACGGCCAATATGGGAAAGCGCAAAAGCTCCACCCCGCAGAAGTTTGTGGGGGAAAA
GCTCATGCGATTCAGCTACCCAGATATTCATTTTGATATGAACTTAACGTACGAGAAGGAGGCT
GAGCTGATGCAGTCTCATATGATGGACCAAGCCATCAACAATGCAATCACCTACCTTGGAGCTG
AGGCCCTTCACCCTCTGATGCAGCACGCACCAAGCACAATCGCCGAGGTGGCCCCAGTTATAAG
CTCAGCTTATTCTCAGGTCTATCATCCAAACAGGATAGAAAGACCCATTAGCAGGGAGACAGCT
GATAGTCACGAGAACAACATGGATGGCCCCATCTCTCTCATCAGACCAAAGAGTCGACCCCAGG
AAAGAGAGGCCTCTCCCAGCAATAGCTGCCTCGATTCTACTGACTCAGAAAGCAGCCATGATGA
CCGCCAGTCCTACCAAGGAAACCCTGCCTTAAATCCCAAGAGGAAACAAAGCCCACCTTACATG
AAGGAGGATGTCAAGGCTTTGGATGCTACCAAGGCCCCCAAGGGCTCTCTGAAGGACATCTACA
AGGTTTTCAACGGAGAAGGAGAACAGATAAGGGCCTTCAAGTGTGAGCACTGCCGAGTCCTTTT
CCTAGACCATGTCATGTACACCATTCACATGGGTTGCCATGGCTACCGGGACCCACTGGAATGC
AACATCTGTGGCTACAGAAGCCAGGACCGCTACGAGTTTTCATCACACATTGTTCGAGGGGAGC
ACACATTCCACTAGGCCTTTTCATTCCAAAGGGGACCCCTATGAAGAACTGCACATGAAGAAAT
ACTGCACTTACAGTCCCACCTTCCCTCAGATGGTGACATGCTTACTTCTTCATGCTGTCACTGT
CTATATTTCTTATTTTGTGGACAAAATGTCATTTGCTCTGCCTAATTACAATAAGGAAGAAACA
AGAGAAAAGGGATGGGATGTTCACTGATAACTTGGCTTGTTTATTTCGTGAGCATTTAAAGCAG
TTCATTTCGGCCATGCGTCCTTGCTAAGGCCTATCATGATTTAGGAGATCACTCAGTTCATAGA
GATTCCTCTAAGATATTCTGATTTGCCATTCATGTTCAGGATTATGATAGAAGGCAGGAAAGTT
GAGAGTTCTCTGGGTAGGATTTTGGGCAATTCAAAACAGTCTAAGTCATTTTACTCTCAAAGAA
GATGTTTCAAAATGTAAACCCATTTTATTTTCTGTTCTTAGAGATCATGGAACACAAACACGAT
GTTATTTTCCATAACTACAAGGATGAGTTGAATTGTTATGGGTTCTGTGTTTACCTCCCCTACG
GAATTTATAATTGAGTATGTTTTACACTGTATCCTATAGCAAAACTTTTAAACTACAGGTAGTC
AAGGGCCACTATGATACATCTGAGGTCCTTTGATCTTATTTTTCTAAACTTGCGCACTGTTTTT
CCATAGTTTTGATGACTGGCATTTTATAGACACCCTGGCAGCCTTACTTTTAACACCTGTAACA
AATAGTATTTTTATGTAGTTTTCAGAATAACATATGTTCGCAAGAGTGGGTAAGAGGCAGTCAG
TAATTTCCAGGAAGAATTCTGCTTTTCACAATTTGAGATTGTTTTTTTTTTTTCTTTTAAGCTG
TAAGATGCCGGCAGCCTAGTATACATATTTGCTTCTAAAGGTGTGTTTACGATTGTCACTTTAT
CAGCATTCAGTGTTAACCAGTCAGCAGAAAAGTGTAATTAGGCGAACAGTAGGGGGAATTCCCA
CTCTAAGAACCCTTTTCTGGTATTTCTCTTCAAGCTGTGAGCAGTCAGTGTTCTATCATAGTTC
ATTCCTCTTTGACTCTTGGTATAGAAGGTCTTAAAGAGCCTTGCTAACAGCTGCTTCCTCTGAA
ATCATGGAGCAACTGTTAATTGGACCTGAAAGTGCTCACCTGAACCCTGGAAGGTCTTTTATTT
ACTAGGGCTATGTATTCCACTATTTCTTCAGTAATGTCATTGCCTTTGCTGGAGACAAAAGGGA
ACCTCTTTGTTACCAGAATAGCATAGTGCAGGTCAAACAAACAAACAGAAAGTTTTCTGTCAGC
CTTCCTGGAGCTGAGAATGTGACACTCTTCAGGAGAGGGTCCCGCACTTTAAAAATAAAAACAA
AAAGTTCAACTCTAGAGGCCCTTATCAGAAATGAATCTCAACCCCTTAGTCAAGAATCTACTGT
CTTCTCTTAATTTGCACATGACATATACTTCCATATTTCATGCTCAGGTTTTAATCCGATCGCT
GCGAGTTCTCAGCTTTTCTTTTTCTTTCCGAAGTTCACTTGCATGTGTGGGTAGGGTTGGAGCA
CACTGTCATCAAGGCATTTGGGGGAATCCATTTGGCAGATATATACATATACATATATATATAT
ATATATATATATATATATATATAGATAGATAGAGAGAGAGAGAGCGAGCTGCTTGTGTTAGAGG
AAAAGAAGCCTGACCATAAGTGGATTATTTGACAGCCATTTGTAAATGCTGAAAGGTCTTCTGG
GAGGTAACACATAGCTGCTCCATCAGACCTTTGACTGTCATGCCAAAACCATGTTTGCTGTGGG
AAGTGTTAAGACTCAAGTAGTGTCCACCGATGAGCAACGTGTGTGCTCCTAACGTGCGTGCTCC
TAACGTGCTTCACAGGTTTCCTTCTGTTCATTTAAGCAACTTCCTAGCCCTACCGTAGCCAGAG
CCACGTAGTTCTGACTTGCTTCTTTTACTAACTCTTATCTTCGTTATTTCTGGAGAAATATCCA
AATGGTACCTTTACATGTAAGAGAATGCACCAAAAAAAAAAAGAGCTATATCAAATGCCAACTG
TTGGGTTTTCCAAGTTTTGTTTTCGTATCCCTTGGTACATTGTGAAAACACAGTTTACTCAGGG
ATAAAACATCTCGTCACGCCTTCCTTGTCCCCGTTTAGCCTGCACACTCTGGAATCACAGTGGA
AAGGATATTTATTTCTGAATGAGGTAAATAAGTTTAAGGCTCATGACATTTTTGTTTTAATGTA
ACTTAAGGAAGCATCCGGATGCCTGTCTGGGTGTTCGTTTTGGCTCATTGTGGACACATGCAAG
CGTCTGCTGTCAACTTTCCTTCTCTCTGCTCGCACCTACTGTGTTAACAATCATGCACCTATCT
GCCCTAGGACGAAACTGACTTTAGGTGTACTGAAAGAGTCGTGTCCTTCCCCCACAAAGGTGGT
ACCGACGTGCTCTGCCTTTCTGATCCCATTTTATTGGAAAACCTGATTTATTCAGAGGAGTGAG
CTATAAGGGTTTATTGGTTGTACATACACACTTAGCATTTTTTTTCAGCTGCATGGCACAAGGT
ACAGATAAAAGTAGATAGCTCTGATGTGACAGGGACAAATGAGGGCAAAGTGAACCCAAGACTC
GTGAGTTACTATAAACTCTGTGGACCCTCAGTGACGGTCACACTTGCTTCTGTTTCACCAAAGA
GAATAGGAGACACGGTAGCACCTAAAAGTAAGCATGATGGCCAGATACCAAATAAATCAAATTT
ACATAACCGTCACAAGACCAGTTTACTTAGGTGAAATGTCACCCTTGAGAGAGGATTTGAGGGC
ATGAAAATGGGTTACCCTCTGTGTTTTCCAGTTTGTCGGGAATTTAACAGATGGCTCTGCCCTC
ATTTTGCCCAAATTATTATTATTATTTTTGATCTCCAGTTCCTTCTGGAGAAACATGCTGCCTC
CCGGTAACCGTGATGAATTGCTTGTTATAAAGGCTTTTTAGAGCAGTGAGAACAGCCAGCATGA
TGAGCGGTGGAGGGAAACACTGTCATTCAAACATTCCATTAAGAAGTGTCTGGATAAAATGGGG
ATATGAGGGCCGACCATTAAGATTTAGGACGAAGTCGCCTGGCTGGCTGGCATGCGTACAGGTC
AGTGTTTGAATGCAGTATAGTTCACATGCACATGTGTATTGCACATTCTTTTAATAAAAATTCA
CAGAAAAGAAGCAGTTAGAAATCACCAGTTGTGTTGCAAAGGCATAGAGTTAGAAGTACAGTCC
AGCAGGTGTATTAGGAAAGCCCAAAGTTGTCCATGTGTCTTTAAGACTAATGGCCATTTAAATC
GCGAATCTCCATTGCCTGCATCGAGAAAAACAAAGCAAAGGGAATGCAATGAAACAGTGAAAGG
GTATTAAGTTGGCTGGTGGATATTTGAAGAAGTACCAATTCTTTTCCGAGTGGAAGAAAATGCA
GGAAATGACTTAGCAACTTTGGCTTGTATGCGTGATTTCCTGTCCAGTGGTACACCTCACAAGT
TTGTAGTTTCCAAGACTTCATCTTCTCTCCAAAATGCTAAGTCAGGGTAGAAAGGTGTGCTGAA
GAGGCCCGAAAGCACCAGGAGAGCGTCTGTCCTAGATTCAGGACAGCACGTACACTATCCAAGT
CACCTGCTGTAGTGTTTCAGCCTGGGATTATTCTTTTTACTATAAAATTGTAGACTGGTGGTCA
TCGGCAGTTGTATTTCATGTTATTTCAATAACTACTGTCTGTATAATTATTCTACAGCAGACGC
TCCCCCAGGTCCAAAAAGGGAAAAAAGTGAGGGGTGAATTGAAACTTTGTATATATAAAAGTTA
TTTTATAAATATTTTAGTCTTCCAGTTTCTGCAAAATAATTAAAATATACAGTAACTGGTCTCT
TAACCCCTGAATTTAATGTATTAAATACTTATAAAATTTTATATTGGTGCCTTTTAAAAATGCA
TTGAGAGTGCTGGGTAGCTGTTTGGCTCCACCACACTTGGACTGTGTATTTTTTAAGAAAAAAA
AAATCACATAAAATCTAAGTACTCTCTAATTCACCTTTGTGTTCTTAGAAAAAAAGAAAGGAAA
AAAGCTGCTAAAAGACTTTACCAGACTTTTAGCTGAGCTGGCAAATGTGACAAGAAACTTTGAA
ACCAGATTTTAATCTTTTTGGCTTGATGGTATTTCTGGACACTATTCTGTCGGGGCAAAATTGT
AGACTCACATGTCAGCAGTGAATTGGATTATGCTATGTGGTTTAATTTATTCTTGAGGAAGAAT
ATGTTTTGCATCACACAGGGGGTTCTTTGTATAATTTGGAGTCAATAATTACAGTATTGTTTTG
CTTTAAAAAAATGCCCGACTGGTGTTGCTCTAGTCTTGGGTCTTCTGTCTTCTAACCTGTAGTT
GTTTGGTGGAATGGTGTGCAAATGTGGACCATTGTTTCCTCCTGAACAAAACAAAGCTCAGCTC
TCAAGTCCCATGACTCCAAAGTGTCATCTCAGATGTTTAACGCGGGGTTGTCTGTCACTTTGTG
AAGGGTGTCTTCGACTATGACAACTTTGTAAAAAACGAGCTGCTGGTTTTACAAAGTAGACATC
ATATGACCAAGAAGCTGTGATGTGCTAGTGTTTCTTTCCGTCATAGTGTACTCTTAGGCCAAAT
AATGACACCTTGAATATTTTTACATTTATTACAGAGACCTAAAATTTTGGAATTCTAAAAGGTT
TTTATGTAATGCTCTATCTTACAGCAGTTTTCTCTTCTCTTGCTGTACTGTGAGTCTGTGCGTA
TTTTTTTCTTACGCACCCTTGGAAATGAGTTTTTAGTTCTGTTTATGGTGTTTCTCTCCCATAC
ACTCGTTTATATACGTTCTGTACACATTTCTTATGAAGCCACCTTTCTTGTGCATAGACAAGTG
ACAAGTACATGAACCACTAGTTCCCTAAGATGACTTTTATATTATGAATTAATATGAAATTTAT
AGATCATGTGCTAAGCCCCATTAAGTGCAGAATAAAAACTTCCTATAGGTCCAAATAAGCCAGT
GTGCACTGAATTGGGCCTTCAGTTTACCTCGAGTGACACGAAGTAAGGAAAGCTTGGGCAGATG
GCGGTCCCTCTAGCCAGCACCATACACTTACTAGCATGTCGCTGAGTCTCATTTACTGGGAATG
GATTTTTAAAGGAATACACTGGAAGGAGGGAAGGGATCGGGGGACTTCTGGTGTTTTTGTGGTT
GCTTTGTCCTTTTTAAAATGTTGTTCAAATTGTGGAACTGTGATCTAAAAACATTTAGACTGAG
GAGCACCGGAGAGGATGTCCGTCAATCACTTGCCCTTCTGTACCGCTAAGTTCTGGTTTCGCCT
CTCCCTTCCTCTCACCTCCTCATCCCCACTCTGTATGTAGCCCTCCTCGCCATTGCTTCTCCAT
GTCTCTCTCGACCCTCCTACTAGTTAGGAGGGCAACTCTGAACTTCCGACTCATGAAGTCTTAA
CTTTTTGTCTCAGTGGTTTTTGTTAGCTGTGTAGTCTGCTGGCGTATTTTTATACCCTAGTGGA
GTTTTGTATTTCCAAAGCGTGGTTGGGTTGACATGGTAAGCTGTATAGTCCTTACCTTGCTTCA
TCCTCAAGTAGGAGGCACGGAACATGACTCCAGCAATTCTGGAATCGGAGTATCCGTCTGGCTC
CTTTGTGCTTGGATTCTGACTTGTTTGGCTTTCTTCTTAAATACAAATCATAAGAGAGTAGACT
CCCCCATCCCCACCAAACACTGAGAGGATAAAAACGGAAAGCAAGAGTCTTAACTTTCTCCCAA
CGGGGTGCGGGGAGGGGCGAGTGCTTTAACACTTCTGAGTGATATTTCAGGTTCAGAAGGGGTC
CCCAGACCCCTCGCGCTCACCATCGGGTCCCTTGGACCCTGTGCTATTTGCAGCTTCAGAATGG
TTACTTTTGTGATGGAGTTTAACTGCTATTCTTTTTTTCCCCATAAAAGTGCAATACCCCTCTT
GAAGTCTTAAAAACTATGGTAATTTTCTTCTTTTCTCTTTCTGACATTTGTTTCTTTTACCAAT
GATGAAAAGAAACCATTGGAAATTGTAACATGTCATAGGACATAACAAGCAAAAATGAAAAACC
ACTCCACTATGAAAAGCTGAAAAAAAAAATGTAACAAATGACTTCTCTGACTTTCTGGAAACTT
CGTTTAGGCTAAATTGCCTTGGAAATCATGAGTGAGAAGTTTATCCTGAGGCTGAAATATGATT
TTTCTCCCACTCTTGTCTAATGCTCTTAAGTTAAATAACTAATATTTAATGTTTTCATTTCTCT
CCTTTTGGAATATAAATATCAAAGCACTTAGGTCAGGTTTAAATCAATATTACCTGTTGAAGAA
AAATTTTTTACATATTTAAAGCAGACCTGTTTCAATGCAGATGGAGAAGTATCTTTTGTATTAT
CCATATTTATATGTAGTGTGCTCTTTTTTTAATACCTGTGTTTCTGTAGTAAGACTGCTGTATT
GTAAATACACGTTTTATTAAAAAGTAACATTTCTTTGGCA

hide sequence

RefSeq Acc Id:

XM_039083325 ⟹ XP_038939253

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	78,495,670 - 78,640,367 (-)	NCBI
mRatBN7.2	9	71,046,038 - 71,190,775 (-)	NCBI

RefSeq Acc Id:

XM_063266954 ⟹ XP_063123024

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	78,495,670 - 78,640,369 (-)	NCBI

RefSeq Acc Id:

XM_063266955 ⟹ XP_063123025

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	78,495,670 - 78,640,884 (-)	NCBI

RefSeq Acc Id:

XM_063266956 ⟹ XP_063123026

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	78,495,670 - 78,640,367 (-)	NCBI

RefSeq Acc Id:

XM_063266957 ⟹ XP_063123027

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	78,495,670 - 78,640,896 (-)	NCBI

RefSeq Acc Id:

XM_063266958 ⟹ XP_063123028

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	78,495,670 - 78,638,377 (-)	NCBI

RefSeq Acc Id:

XM_063266959 ⟹ XP_063123029

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	78,495,670 - 78,640,374 (-)	NCBI

RefSeq Acc Id:

XM_063266961 ⟹ XP_063123031

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	78,495,670 - 78,640,369 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_001100386	(Get FASTA)	NCBI Sequence Viewer
	XP_006245181	(Get FASTA)	NCBI Sequence Viewer
	XP_006245182	(Get FASTA)	NCBI Sequence Viewer
	XP_006245183	(Get FASTA)	NCBI Sequence Viewer
	XP_008765441	(Get FASTA)	NCBI Sequence Viewer
	XP_038939253	(Get FASTA)	NCBI Sequence Viewer
	XP_063123024	(Get FASTA)	NCBI Sequence Viewer
	XP_063123025	(Get FASTA)	NCBI Sequence Viewer
	XP_063123026	(Get FASTA)	NCBI Sequence Viewer
	XP_063123027	(Get FASTA)	NCBI Sequence Viewer
	XP_063123028	(Get FASTA)	NCBI Sequence Viewer
	XP_063123029	(Get FASTA)	NCBI Sequence Viewer
	XP_063123031	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDL75273	(Get FASTA)	NCBI Sequence Viewer
	EDL75274	(Get FASTA)	NCBI Sequence Viewer
	EDL75275	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000054658.2
	ENSRNOP00000069412.3
	ENSRNOP00000101201
	ENSRNOP00000101201.1
	ENSRNOP00000101619.1
	ENSRNOP00000109346
	ENSRNOP00000109346.1
	ENSRNOP00000111682
	ENSRNOP00000111682.1

RefSeq Acc Id:

NP_001100386 ⟸ NM_001106916

- UniProtKB:

A6KFF3 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MFFNQRTISFHCTLTMETDGIDGYITCDNELSPEGEQATMAIDLTSSTPNGQHASPGHMTSTNS
VKLEMQSDEECDRQPLSREDEIRGHDEGSSLEDPLIESGEVADNRKVQDLQGEGGIRLPNGKLK
CDVCGMVCIGPNVLMVHKRSHTGERPFHCNQCGASFTQKGNLLRHIKLHSGEKPFKCPFCSYAC
RRRDALTGHLRTHSVGKPHKCNYCGRSYKQRSSLEEHKERCHNYLQNVSMEAAGQVMSHHVPPM
EDCKEQEPIMDNNISLVPFERPAVIEKLTANMGKRKSSTPQKFVGMRHLLPLGRSWL

hide sequence

RefSeq Acc Id:	XP_006245182 ⟸ XM_006245120
- Peptide Label:	isoform X4
- UniProtKB:	A6KFF3 (UniProtKB/TrEMBL)
- Sequence:	show sequence METDGIDGYITCDNELSPEGEQATMAIDLTSSTPNGQHASPGHMTSTNSVKLEMQSDEECDRQP LSREDEIRGHDEGSSLEDPLIESGEVADNRKVQDLQGEGGIRLPNGKLKCDVCGMVCIGPNVLM VHKRSHTGERPFHCNQCGASFTQKGNLLRHIKLHSGEKPFKCPFCSYACRRRDALTGHLRTHSV GKPHKCNYCGRSYKQRSSLEEHKERCHNYLQNVSMEAAGQVMSHHVPPMEDCKEQEPIMDNNIS LVPFERPAVIEKLTANMGKRKSSTPQKFVGEKLMRFSYPDIHFDMNLTYEKEAELMQSHMMDQA INNAITYLGAEALHPLMQHAPSTIAEVAPVISSAYSQVYHPNRIERPISRETADSHENNMDGPI SLIRPKSRPQEREASPSNSCLDSTDSESSHDDRQSYQGNPALNPKRKQSPPYMKEDVKALDATK APKGSLKDIYKVFNGEGEQIRAFKCEHCRVLFLDHVMYTIHMGCHGYRDPLECNICGYRSQDRY EFSSHIVRGEHTFH hide sequence

RefSeq Acc Id:	XP_006245181 ⟸ XM_006245119
- Peptide Label:	isoform X4
- UniProtKB:	A6KFF3 (UniProtKB/TrEMBL)
- Sequence:	show sequence METDGIDGYITCDNELSPEGEQATMAIDLTSSTPNGQHASPGHMTSTNSVKLEMQSDEECDRQP LSREDEIRGHDEGSSLEDPLIESGEVADNRKVQDLQGEGGIRLPNGKLKCDVCGMVCIGPNVLM VHKRSHTGERPFHCNQCGASFTQKGNLLRHIKLHSGEKPFKCPFCSYACRRRDALTGHLRTHSV GKPHKCNYCGRSYKQRSSLEEHKERCHNYLQNVSMEAAGQVMSHHVPPMEDCKEQEPIMDNNIS LVPFERPAVIEKLTANMGKRKSSTPQKFVGEKLMRFSYPDIHFDMNLTYEKEAELMQSHMMDQA INNAITYLGAEALHPLMQHAPSTIAEVAPVISSAYSQVYHPNRIERPISRETADSHENNMDGPI SLIRPKSRPQEREASPSNSCLDSTDSESSHDDRQSYQGNPALNPKRKQSPPYMKEDVKALDATK APKGSLKDIYKVFNGEGEQIRAFKCEHCRVLFLDHVMYTIHMGCHGYRDPLECNICGYRSQDRY EFSSHIVRGEHTFH hide sequence

RefSeq Acc Id:	XP_006245183 ⟸ XM_006245121
- Peptide Label:	isoform X4
- UniProtKB:	A6KFF3 (UniProtKB/TrEMBL)
- Sequence:	show sequence METDGIDGYITCDNELSPEGEQATMAIDLTSSTPNGQHASPGHMTSTNSVKLEMQSDEECDRQP LSREDEIRGHDEGSSLEDPLIESGEVADNRKVQDLQGEGGIRLPNGKLKCDVCGMVCIGPNVLM VHKRSHTGERPFHCNQCGASFTQKGNLLRHIKLHSGEKPFKCPFCSYACRRRDALTGHLRTHSV GKPHKCNYCGRSYKQRSSLEEHKERCHNYLQNVSMEAAGQVMSHHVPPMEDCKEQEPIMDNNIS LVPFERPAVIEKLTANMGKRKSSTPQKFVGEKLMRFSYPDIHFDMNLTYEKEAELMQSHMMDQA INNAITYLGAEALHPLMQHAPSTIAEVAPVISSAYSQVYHPNRIERPISRETADSHENNMDGPI SLIRPKSRPQEREASPSNSCLDSTDSESSHDDRQSYQGNPALNPKRKQSPPYMKEDVKALDATK APKGSLKDIYKVFNGEGEQIRAFKCEHCRVLFLDHVMYTIHMGCHGYRDPLECNICGYRSQDRY EFSSHIVRGEHTFH hide sequence

RefSeq Acc Id:	XP_008765441 ⟸ XM_008767219
- Peptide Label:	isoform X6
- UniProtKB:	A6KFF3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MFFNQRTISFHCTLTMETDGIDGYITCDNELSPEGEQATMAIDLTSSTPNGQHASPGHMTSTNS VKLEMQSDEECDRQPLSREDEIRGHDEGSSLEDPLIESGEVADNRKVQDLQGEGGIRLPNGERP FHCNQCGASFTQKGNLLRHIKLHSGEKPFKCPFCSYACRRRDALTGHLRTHSVGKPHKCNYCGR SYKQRSSLEEHKERCHNYLQNVSMEAAGQVMSHHVPPMEDCKEQEPIMDNNISLVPFERPAVIE KLTANMGKRKSSTPQKFVGEKLMRFSYPDIHFDMNLTYEKEAELMQSHMMDQAINNAITYLGAE ALHPLMQHAPSTIAEVAPVISSAYSQVYHPNRIERPISRETADSHENNMDGPISLIRPKSRPQE REASPSNSCLDSTDSESSHDDRQSYQGNPALNPKRKQSPPYMKEDVKALDATKAPKGSLKDIYK VFNGEGEQIRAFKCEHCRVLFLDHVMYTIHMGCHGYRDPLECNICGYRSQDRYEFSSHIVRGEH TFH hide sequence

Ensembl Acc Id:

ENSRNOP00000054658 ⟸ ENSRNOT00000057849

Ensembl Acc Id:

ENSRNOP00000069412 ⟸ ENSRNOT00000087779

RefSeq Acc Id:	XP_038939253 ⟸ XM_039083325
- Peptide Label:	isoform X2
- UniProtKB:	A0A8I5ZMW5 (UniProtKB/TrEMBL), A6KFF3 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000093923 ⟸ ENSRNOT00000116112

Ensembl Acc Id:

ENSRNOP00000091675 ⟸ ENSRNOT00000120140

Ensembl Acc Id:

ENSRNOP00000087415 ⟸ ENSRNOT00000102104

Ensembl Acc Id:

ENSRNOP00000091144 ⟸ ENSRNOT00000116708

Ensembl Acc Id:

ENSRNOP00000081679 ⟸ ENSRNOT00000118462

Ensembl Acc Id:

ENSRNOP00000079523 ⟸ ENSRNOT00000119011

RefSeq Acc Id:	XP_063123027 ⟸ XM_063266957
- Peptide Label:	isoform X3
- UniProtKB:	A0A8I6AGQ5 (UniProtKB/TrEMBL), A6KFF3 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063123025 ⟸ XM_063266955
- Peptide Label:	isoform X1
- UniProtKB:	A6KFF3 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063123029 ⟸ XM_063266959
- Peptide Label:	isoform X5
- UniProtKB:	A6KFF3 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063123031 ⟸ XM_063266961
- Peptide Label:	isoform X7
- UniProtKB:	A6KFF3 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063123024 ⟸ XM_063266954
- Peptide Label:	isoform X1
- UniProtKB:	A6KFF3 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063123026 ⟸ XM_063266956
- Peptide Label:	isoform X3
- UniProtKB:	A0A8I6AGQ5 (UniProtKB/TrEMBL), A6KFF3 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063123028 ⟸ XM_063266958
- Peptide Label:	isoform X3
- UniProtKB:	A0A8I6AGQ5 (UniProtKB/TrEMBL), A6KFF3 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000111682 ⟸ ENSRNOT00000121577

Ensembl Acc Id:

ENSRNOP00000101619 ⟸ ENSRNOT00000166250

Ensembl Acc Id:

ENSRNOP00000109346 ⟸ ENSRNOT00000155133

Ensembl Acc Id:

ENSRNOP00000101201 ⟸ ENSRNOT00000160705

Protein Domains

C2H2-type

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-A0A0G2JVA9-F1-model_v2	AlphaFold	A0A0G2JVA9	1-541	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1308686	AgrOrtholog
BioCyc Gene	G2FUF-27265	BioCyc
Ensembl Genes	ENSRNOG00000027430	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000057849.5	UniProtKB/TrEMBL
	ENSRNOT00000087779.3	UniProtKB/TrEMBL
	ENSRNOT00000121577	ENTREZGENE
	ENSRNOT00000121577.1	UniProtKB/TrEMBL
	ENSRNOT00000155133	ENTREZGENE
	ENSRNOT00000155133.1	UniProtKB/TrEMBL
	ENSRNOT00000160705	ENTREZGENE
	ENSRNOT00000160705.1	UniProtKB/TrEMBL
	ENSRNOT00000166250.1	UniProtKB/TrEMBL
Gene3D-CATH	Classic Zinc Finger	UniProtKB/TrEMBL
InterPro	Ikaros_C2H2-ZF	UniProtKB/TrEMBL
	Znf_C2H2/integrase_DNA-bd	UniProtKB/TrEMBL
	Znf_C2H2_sf	UniProtKB/TrEMBL
KEGG Report	rno:301476	UniProtKB/TrEMBL
NCBI Gene	301476	ENTREZGENE
PANTHER	ZINC FINGER PROTEIN	UniProtKB/TrEMBL
	ZINC FINGER PROTEIN HELIOS	UniProtKB/TrEMBL
Pfam	zf-C2H2	UniProtKB/TrEMBL
PhenoGen	Ikzf2	PhenoGen
PROSITE	ZINC_FINGER_C2H2_1	UniProtKB/TrEMBL
	ZINC_FINGER_C2H2_2	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000027430	RatGTEx
SMART	ZnF_C2H2	UniProtKB/TrEMBL
Superfamily-SCOP	SSF57667	UniProtKB/TrEMBL
UniProt	A0A0G2JVA9_RAT	UniProtKB/TrEMBL
	A0A8I5ZMW5	ENTREZGENE
	A0A8I6AGQ5	ENTREZGENE
	A0ABK0LFH9_RAT	UniProtKB/TrEMBL
	A0ABK0LIN9_RAT	UniProtKB/TrEMBL
	A0ABK0LT64_RAT	UniProtKB/TrEMBL
	A0ABK0M501_RAT	UniProtKB/TrEMBL
	A6KFF1_RAT	UniProtKB/TrEMBL
	A6KFF3	ENTREZGENE, UniProtKB/TrEMBL
	D4A7Y7_RAT	UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2008-03-03	Ikzf2	IKAROS family zinc finger 2	Zfpn1a2_predicted	zinc finger protein, subfamily 1A, 2 (Helios) (predicted)	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2005-01-12	Zfpn1a2_predicted	zinc finger protein, subfamily 1A, 2 (Helios) (predicted)			Symbol and Name status set to approved	70820	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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