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Gene: Dcaf8 (DDB1 and CUL4 associated factor 8) Rattus norvegicus

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Symbol:

Dcaf8

Name:

DDB1 and CUL4 associated factor 8

RGD ID:

1308513

Description:

Predicted to be involved in protein ubiquitination. Predicted to act upstream of or within myotube cell development. Predicted to be located in nucleus. Predicted to be part of Cul4-RING E3 ubiquitin ligase complex. Predicted to be active in cytoplasm. Human ortholog(s) of this gene implicated in giant axonal neuropathy 2. Orthologous to human DCAF8 (DDB1 and CUL4 associated factor 8); INTERACTS WITH 17beta-estradiol; amiodarone; amitriptyline.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

DDB1- and CUL4-associated factor 8; LOC364050; RGD1308513; similar to expressed sequence AA408877; WD repeat domain 42A; WD repeat-containing protein 42A; Wdr42a

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	DCAF8 (DDB1 and CUL4 associated factor 8)	HGNC	Ensembl, HomoloGene, Inparanoid, NCBI, OrthoDB, OrthoMCL, Panther, Treefam
Mus musculus (house mouse):	Dcaf8 (DDB1 and CUL4 associated factor 8)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Dcaf8 (DDB1 and CUL4 associated factor 8)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	DCAF8 (DDB1 and CUL4 associated factor 8)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	DCAF8 (DDB1 and CUL4 associated factor 8)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Dcaf8 (DDB1 and CUL4 associated factor 8)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	DCAF8 (DDB1 and CUL4 associated factor 8)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	DCAF8 (DDB1 and CUL4 associated factor 8)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Dcaf8 (DDB1 and CUL4 associated factor 8)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Dcaf8 (DDB1 and CUL4 associated factor 8)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	DCAF8L2 (DDB1 and CUL4 associated factor 8 like 2)	HGNC	EggNOG, OrthoDB
Homo sapiens (human):	DCAF8L1 (DDB1 and CUL4 associated factor 8 like 1)	HGNC	OrthoDB
Alliance orthologs ³
Homo sapiens (human):	DCAF8 (DDB1 and CUL4 associated factor 8)	Alliance	DIOPT (HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Dcaf8 (DDB1 and CUL4 associated factor 8)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Dcaf8 (DDB1 and CUL4 associated factor 8)	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	dcaf8 (DDB1 and CUL4 associated factor 8)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	CG8001	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Drosophila melanogaster (fruit fly):	CG8001	Alliance	DIOPT (Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	dcaf8	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	13	87,141,940 - 87,199,859 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	13	87,142,525 - 87,202,099 (+)	Ensembl				GRCr8
mRatBN7.2	13	84,609,838 - 84,667,025 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	13	84,610,248 - 84,669,726 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	13	87,113,615 - 87,159,972 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	13	88,513,873 - 88,560,232 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	13	85,698,680 - 85,745,009 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	13	90,532,153 - 90,587,542 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	13	90,532,326 - 90,591,796 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	13	95,053,210 - 95,114,044 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	13	88,029,285 - 88,186,506 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	13	84,221,681 - 84,268,071 (+)	NCBI		Celera
RGSC_v3.1	13	88,218,174 - 88,375,388 (+)	NCBI
Cytogenetic Map	13	q24	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

giant axonal neuropathy 2 (ISO)

neurofibromatosis 1 (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dimethylhydrazine (ISO)

17alpha-ethynylestradiol (ISO)

17beta-estradiol (EXP,ISO)

17beta-hydroxy-5alpha-androstan-3-one (ISO)

2,3,7,8-tetrachlorodibenzodioxine (ISO)

3,4-methylenedioxymethamphetamine (ISO)

acrylamide (ISO)

aflatoxin B1 (ISO)

amiodarone (EXP)

amitriptyline (EXP)

amitrole (EXP)

antirheumatic drug (ISO)

benzo[a]pyrene (ISO)

bis(2-ethylhexyl) phthalate (ISO)

bisphenol A (EXP,ISO)

butanal (ISO)

cadmium atom (ISO)

cadmium dichloride (ISO)

carbon nanotube (ISO)

CGP 52608 (ISO)

choline (ISO)

clomipramine (EXP)

cocaine (EXP)

cyclosporin A (ISO)

cylindrospermopsin (ISO)

Dibutyl phosphate (ISO)

diquat (ISO)

dorsomorphin (ISO)

doxorubicin (ISO)

epoxiconazole (ISO)

ethanol (ISO)

folic acid (ISO)

formaldehyde (ISO)

hydralazine (ISO)

imipramine (EXP)

irinotecan (ISO)

ketoconazole (EXP)

L-methionine (ISO)

lead(0) (ISO)

mercury dichloride (EXP)

nickel atom (ISO)

nitrates (ISO)

okadaic acid (ISO)

paracetamol (ISO)

pentanal (ISO)

perfluorohexanesulfonic acid (ISO)

potassium dichromate (ISO)

propiconazole (ISO)

rotenone (ISO)

SB 431542 (ISO)

silicon dioxide (ISO)

sodium arsenite (ISO)

thioacetamide (EXP)

thiram (ISO)

titanium dioxide (ISO)

Tributyltin oxide (ISO)

valproic acid (ISO)

vincristine (ISO)

vitamin E (ISO)

zinc sulfate (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

myotube cell development (ISO)

protein ubiquitination (IEA)

Cellular Component

Cul4-RING E3 ubiquitin ligase complex (IBA,IEA,ISO,ISS)

cytoplasm (IBA,IEA,ISO,ISS)

cytosol (IEA,ISO)

nucleoplasm (IEA,ISO)

nucleus (IEA,ISO,ISS)

Molecular Function

protein binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	OMIM Disease Annotation Pipeline	OMIM Disease Annotation Pipeline
3.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
5.	Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences.	Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11.

Additional References at PubMed

PMID:16949367	PMID:22500989

Genomics

Comparative Map Data

Dcaf8
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	13	87,141,940 - 87,199,859 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	13	87,142,525 - 87,202,099 (+)	Ensembl				GRCr8
mRatBN7.2	13	84,609,838 - 84,667,025 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	13	84,610,248 - 84,669,726 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	13	87,113,615 - 87,159,972 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	13	88,513,873 - 88,560,232 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	13	85,698,680 - 85,745,009 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	13	90,532,153 - 90,587,542 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	13	90,532,326 - 90,591,796 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	13	95,053,210 - 95,114,044 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	13	88,029,285 - 88,186,506 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	13	84,221,681 - 84,268,071 (+)	NCBI		Celera
RGSC_v3.1	13	88,218,174 - 88,375,388 (+)	NCBI
Cytogenetic Map	13	q24	NCBI

DCAF8
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	1	160,215,720 - 160,262,549 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	1	160,215,715 - 160,263,388 (-)	Ensembl			hg38	GRCh38
GRCh37	1	160,185,510 - 160,232,339 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	1	158,452,129 - 158,498,603 (-)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	1	156,998,577 - 157,045,052	NCBI
Celera	1	133,254,265 - 133,301,114 (-)	NCBI		Celera
Cytogenetic Map	1	q23.2	NCBI
HuRef	1	131,542,143 - 131,588,999 (-)	NCBI		HuRef
CHM1_1	1	161,580,851 - 161,627,695 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	1	159,352,793 - 159,399,623 (-)	NCBI		T2T-CHM13v2.0

Dcaf8
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	1	171,975,574 - 172,023,959 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	1	171,975,651 - 172,024,572 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	1	172,148,015 - 172,196,393 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	1	172,148,084 - 172,197,005 (+)	Ensembl			mm10	GRCm38
MGSCv37	1	174,078,146 - 174,126,524 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	1	173,984,817 - 174,032,141 (+)	NCBI		MGSCv36	mm8
Celera	1	175,002,206 - 175,052,357 (+)	NCBI		Celera
Cytogenetic Map	1	H3	NCBI
cM Map	1	79.54	NCBI

Dcaf8
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955468	11,991,779 - 12,036,835 (-)	Ensembl
ChiLan1.0	NW_004955468	11,991,779 - 12,037,541 (-)	NCBI	ChiLan1.0	ChiLan1.0

DCAF8
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	1	89,589,411 - 89,636,303 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	1	89,329,425 - 89,375,254 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	1	135,569,736 - 135,616,614 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	1	139,490,846 - 139,537,816 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	1	139,490,069 - 139,537,572 (-)	Ensembl			panPan2	panpan1.1

DCAF8
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	38	21,959,228 - 22,001,388 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	38	21,959,254 - 21,999,677 (+)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	38	22,032,410 - 22,074,461 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	38	22,075,704 - 22,117,837 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	38	22,075,689 - 22,117,833 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	38	21,980,526 - 22,022,632 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	38	22,376,883 - 22,418,955 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	38	22,786,523 - 22,828,634 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Dcaf8
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405058	6,338,513 - 6,385,709 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936740	387,469 - 413,961 (+)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936740	368,795 - 415,997 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

DCAF8
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	4	90,214,973 - 90,261,737 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	4	90,214,916 - 90,263,259 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	4	98,104,312 - 98,150,952 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

DCAF8
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	20	3,685,340 - 3,731,323 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	20	3,703,641 - 3,729,479 (+)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666038	2,742,671 - 2,788,965 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Dcaf8
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624794	996,012 - 1,041,301 (+)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Dcaf8
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	10	51,262,227 - 51,309,062 (+)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Dcaf8
364 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	109
Count of miRNA genes:	78
Interacting mature miRNAs:	97
Transcripts:	ENSRNOT00000008944
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1298066	Bp159	Blood pressure QTL 159		0.004	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	13	48639634	93639634	Rat
10755495	Bp387	Blood pressure QTL 387	3.78		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	13	37216241	90057603	Rat
1354655	Bp241	Blood pressure QTL 241	3.9		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	13	38975045	103588154	Rat
8655951	Rf63	Renal function QTL 63	12.2		blood urea nitrogen amount (VT:0005265)	plasma urea nitrogen level (CMO:0000586)	13	71610804	109350286	Rat
4889606	Gluco63	Glucose level QTL 63	2.86	0.003	blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	13	83286150	109350286	Rat
8655945	Rf61	Renal function QTL 61	3.6		blood creatinine amount (VT:0005328)	creatinine clearance (CMO:0000765)	13	71610804	89333251	Rat
71119	Thym2	Thymus enlargement QTL 2	3.8		thymus mass (VT:0004954)	thymus weight to body weight ratio (CMO:0000612)	13	48749814	87285480	Rat
1331783	Bp221	Blood pressure QTL 221	3.72886		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	13	71610804	89333251	Rat
8655959	Pur32	Proteinuria QTL 32	8.4		urine total protein amount (VT:0000032)	urine total protein excretion rate (CMO:0000756)	13	72984506	99745408	Rat
1300166	Kidm6	Kidney mass QTL 6	3.93		kidney mass (VT:0002707)	single kidney wet weight to body weight ratio (CMO:0000622)	13	71610804	89333251	Rat
2293687	Bss26	Bone structure and strength QTL 26	4.6	0.0001	femur morphology trait (VT:0000559)	femur cross-sectional area (CMO:0001661)	13	67635937	109350286	Rat
619615	Bp80	Blood pressure QTL 80		0.0354	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	13	7421791	87286911	Rat
1581573	Uae36	Urinary albumin excretion QTL 36			urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	13	6002008	88706694	Rat
724564	Uae11	Urinary albumin excretion QTL 11	5.7		urine albumin amount (VT:0002871)	urine albumin level (CMO:0000130)	13	47354258	94285672	Rat
738027	Lnnr6	Liver neoplastic nodule remodeling QTL 6	3.3		liver integrity trait (VT:0010547)	liver remodeling tumorous lesion number (CMO:0001461)	13	65613454	109350286	Rat
7207885	Glom27	Glomerulus QTL 27	3.9		kidney glomerulus integrity trait (VT:0010546)	kidney crescentic glomeruli count to kidney normal glomeruli count ratio (CMO:0002139)	13	21120177	109350286	Rat
7387280	Uae43	Urinary albumin excretion QTL 43	5.69	0.4174	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	13	68983334	109350286	Rat
738026	Lnnr5	Liver neoplastic nodule remodeling QTL 5	3.29		liver integrity trait (VT:0010547)	liver remodeling tumorous lesion number (CMO:0001461)	13	62424592	88113509	Rat
2293702	Bss34	Bone structure and strength QTL 34	4.61	0.0001	femur strength trait (VT:0010010)	femur midshaft polar moment of inertia (CMO:0001669)	13	67635937	109350286	Rat
1576318	Schws5	Schwannoma susceptibility QTL 5		0.0351	nervous system integrity trait (VT:0010566)	post-insult time to trigeminal nerve neurilemmoma formation (CMO:0002019)	13	64497900	109350286	Rat
1354621	Rf47	Renal function QTL 47	3.7		kidney renin amount (VT:0010559)	kidney renin level (CMO:0002166)	13	11081740	103588154	Rat
1581554	Pur11	Proteinuria QTL 11			urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	13	6002008	88706694	Rat
12879475	Bp400	Blood pressure QTL 400			arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	13	64375743	109350286	Rat
1354666	Bp244	Blood pressure QTL 244	4.9		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	13	1	103588154	Rat
2293341	Glom15	Glomerulus QTL 15	9.1		kidney glomerulus integrity trait (VT:0010546)	kidney sclerotic glomeruli count to total glomeruli count ratio (CMO:0001269)	13	67635937	109350286	Rat

Markers in Region

RH127477

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	13	84,530,552 - 84,530,739 (+)	MAPPER	mRatBN7.2
Rnor_6.0	13	90,451,157 - 90,451,343	NCBI	Rnor6.0
Rnor_5.0	13	94,974,121 - 94,974,307	UniSTS	Rnor5.0
RGSC_v3.4	13	88,060,595 - 88,060,781	UniSTS	RGSC3.4
Celera	13	84,142,330 - 84,142,516	UniSTS
RH 3.4 Map	13	551.9	UniSTS
Cytogenetic Map	13	q24	UniSTS

RH128723

Rat Assembly	Chr	Position (strand)	Source	JBrowse
Rnor_5.0	18	70,740,618 - 70,740,811	NCBI	Rnor5.0
Rnor_5.0	18	70,864,224 - 70,864,417	NCBI	Rnor5.0
Rnor_5.0	13	95,044,254 - 95,044,447	NCBI	Rnor5.0
RGSC_v3.4	18	72,488,777 - 72,488,969	UniSTS	RGSC3.4
RGSC_v3.4	13	88,131,422 - 88,131,614	UniSTS	RGSC3.4
Celera	18	67,891,233 - 67,891,425	UniSTS
Celera	13	84,212,607 - 84,212,799	UniSTS
Cytogenetic Map	13	q24	UniSTS

RH134414

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	13	84,586,548 - 84,586,741 (+)	MAPPER	mRatBN7.2
Rnor_6.0	13	90,508,564 - 90,508,756	NCBI	Rnor6.0
Rnor_5.0	13	95,029,700 - 95,029,892	UniSTS	Rnor5.0
RGSC_v3.4	13	88,116,690 - 88,116,882	UniSTS	RGSC3.4
Celera	13	84,198,182 - 84,198,374	UniSTS
RH 3.4 Map	13	553.5	UniSTS
Cytogenetic Map	13	q24	UniSTS

BF399606

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	13	84,650,226 - 84,650,381 (+)	MAPPER	mRatBN7.2
Rnor_6.0	13	90,572,256 - 90,572,410	NCBI	Rnor6.0
Rnor_5.0	13	95,093,361 - 95,093,515	UniSTS	Rnor5.0
RGSC_v3.4	13	88,180,086 - 88,180,240	UniSTS	RGSC3.4
Celera	13	84,261,651 - 84,261,805	UniSTS
RH 3.4 Map	13	553.0	UniSTS
Cytogenetic Map	13	q24	UniSTS

AU046984

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	13	84,637,602 - 84,637,861 (+)	MAPPER	mRatBN7.2
Rnor_6.0	13	90,559,635 - 90,559,891	NCBI	Rnor6.0
Rnor_5.0	13	95,080,737 - 95,080,993	UniSTS	Rnor5.0
RGSC_v3.4	13	88,038,114 - 88,038,370	UniSTS	RGSC3.4
Celera	13	84,249,045 - 84,249,301	UniSTS
Cytogenetic Map	13	q24	UniSTS

RH134885

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	13	84,650,914 - 84,651,115 (+)	MAPPER	mRatBN7.2
Rnor_6.0	13	90,572,944 - 90,573,144	NCBI	Rnor6.0
Rnor_5.0	13	95,094,049 - 95,094,249	UniSTS	Rnor5.0
RGSC_v3.4	13	88,180,774 - 88,180,974	UniSTS	RGSC3.4
Celera	13	84,262,339 - 84,262,539	UniSTS
RH 3.4 Map	13	564.4	UniSTS
Cytogenetic Map	13	q24	UniSTS

RH135139

Rat Assembly	Chr	Position (strand)	Source	JBrowse
Rnor_5.0	18	70,740,228 - 70,740,447	NCBI	Rnor5.0
Rnor_5.0	18	70,863,834 - 70,864,053	NCBI	Rnor5.0
Rnor_5.0	13	95,044,618 - 95,044,837	NCBI	Rnor5.0
RGSC_v3.4	18	72,488,387 - 72,488,605	UniSTS	RGSC3.4
RGSC_v3.4	13	88,131,786 - 88,132,004	UniSTS	RGSC3.4
Celera	18	67,891,597 - 67,891,815	UniSTS
Celera	13	84,212,971 - 84,213,189	UniSTS
Cytogenetic Map	13	q24	UniSTS

RH140256

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	13	84,530,607 - 84,530,827 (+)	MAPPER	mRatBN7.2
Rnor_6.0	13	90,451,212 - 90,451,431	NCBI	Rnor6.0
Rnor_5.0	13	94,974,176 - 94,974,395	UniSTS	Rnor5.0
RGSC_v3.4	13	88,060,650 - 88,060,869	UniSTS	RGSC3.4
Celera	13	84,142,385 - 84,142,604	UniSTS
RH 3.4 Map	13	552.5	UniSTS
Cytogenetic Map	13	q24	UniSTS

BF409555

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	13	84,649,239 - 84,649,377 (+)	MAPPER	mRatBN7.2
Rnor_6.0	13	90,571,269 - 90,571,406	NCBI	Rnor6.0
Rnor_5.0	13	95,092,374 - 95,092,511	UniSTS	Rnor5.0
RGSC_v3.4	13	88,179,099 - 88,179,236	UniSTS	RGSC3.4
Celera	13	84,260,664 - 84,260,801	UniSTS
RH 3.4 Map	13	554.4	UniSTS
Cytogenetic Map	13	q24	UniSTS

G42043

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	13	84,654,031 - 84,654,237 (+)	MAPPER	mRatBN7.2
Rnor_6.0	13	90,576,061 - 90,576,266	NCBI	Rnor6.0
Rnor_5.0	13	95,097,166 - 95,097,371	UniSTS	Rnor5.0
RGSC_v3.4	13	88,183,891 - 88,184,096	UniSTS	RGSC3.4
Celera	13	84,265,456 - 84,265,661	UniSTS
Cytogenetic Map	13	q24	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	165	91	90	59	92	59	6	356	192	11	144	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001014231	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001429912	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001429913	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001429914	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001429915	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006250297	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006250298	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006250299	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006250300	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008769746	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063272520	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063272522	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_010056926	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC095300	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC085957	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473985	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ211524	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ225975	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000013	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000008944 ⟹ ENSRNOP00000008944

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	13	87,143,400 - 87,189,872 (+)	Ensembl
mRatBN7.2 Ensembl	13	84,611,327 - 84,657,413 (+)	Ensembl
Rnor_6.0 Ensembl	13	90,532,326 - 90,578,674 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000082469 ⟹ ENSRNOP00000070721

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	13	87,142,603 - 87,202,099 (+)	Ensembl
mRatBN7.2 Ensembl	13	84,610,248 - 84,669,726 (+)	Ensembl
Rnor_6.0 Ensembl	13	90,533,365 - 90,591,796 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000101398 ⟹ ENSRNOP00000095537

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	13	87,142,525 - 87,189,871 (+)	Ensembl
mRatBN7.2 Ensembl	13	84,610,248 - 84,657,402 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000104949 ⟹ ENSRNOP00000083449

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	13	87,166,441 - 87,189,873 (+)	Ensembl
mRatBN7.2 Ensembl	13	84,611,093 - 84,657,498 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000126224 ⟹ ENSRNOP00000111979

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	13	87,142,603 - 87,190,792 (+)	Ensembl

RefSeq Acc Id:

NM_001014231 ⟹ NP_001014253

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	13	87,142,671 - 87,189,021 (+)	NCBI
mRatBN7.2	13	84,610,294 - 84,656,647 (+)	NCBI
Rnor_6.0	13	90,532,326 - 90,578,676 (+)	NCBI
Rnor_5.0	13	95,053,210 - 95,114,044 (+)	NCBI
RGSC_v3.4	13	88,029,285 - 88,186,506 (+)	RGD
Celera	13	84,221,681 - 84,268,071 (+)	RGD

Sequence:

show sequence

GTGGACGGGGCGGCTGGGCCTGGAACAGTTGGAGCATCCGCTGGCAGAAGGATGACCCTAGATG
GGAAGCGGGCTGCCGGGCCTCGCCAGCTCCCGTGCTTGTAACTGCCCCAGCCGGACGCCCTCCC
CTTGACCTACCGGTTCTTCAGCGAACCTTCAGACCAGTTTTCTCAGGATCGTGGGCCAGACTTC
GGTCGGCGATAAAAACAGCAAGGCTGGCTACCATATTCAAGATGTCCAGTAAAAGGCCCAGCAC
AGATGGGAGAAGAGACTTGGCTAACGGAAGCCTGTCTAGCAGTCCAGAAGAAATGTCTGGAGCT
GAAGAAGGGAGGGAAACATCTTCGGGGATTGAAGTAGAGGCCTCAGACCTGAGTTTGAGCTTGA
CTGGGGACGATGGTGGCCCCAACCGCACCAGCACAGAAAGTCGTGGCACAGACACAGAGAGCTC
AGGTGAAGAAAAGGACTCTGACAGCATGGAGGACACAGGCCATTATTCCATCAACGATGAAAAC
CGAGTTCACGGCCACTCAGATGAAGAGGAGGAGGAGGAGCAACCTCGGCACCGAGTCCAGCGCA
AACGGGCCAGCCGTGACCAGGACTCATCAGATGATGAGCGAGCCCTGGAAGACTGGGTATCTTC
AGAGACAACAGCTTTACCCCGGCCTCGCTGGCAAGCCCTTCCTGCCCTTCGGGAGCGGGAATTG
GGTTCAAGTGCCCGCTTTGTGTATGAGGCTTGTGGAGCAAGAGTCTTTGTACAGCGTTTCCGCC
TGCAGCATGGGCTTGAGGGCCATACAGGTTGTGTCAATACTTTGCACTTTAACCAGCGTGGCAC
CTGGCTGGCCAGTGGCAGTGATGACCTGAAGGTGGTAGTGTGGGATTGGGTGCGGCGGCAGCCC
GTACTGGACTTTGAGAGTGGCCACAAAAGTAATGTCTTCCAGGCCAAGTTCCTTCCTAACAGTG
GTGACTCCACCCTGGCTATGTGTGCCCGGGATGGGCAGGTCCGAGTCGCAGAACTGTCTGCTAC
ACAGTGCTGCAAGAACACCAAGCGTGTGGCCCAGCACAAGGGAGCATCCCACAAGTTGGCCCTA
GAACCAGACTCTCCCTGCACGTTCCTGTCGGCTGGTGAAGATGCCGTTGTCTTCACCATCGACC
TAAGACAAGACCGGCCAGCTTCGAAACTGGTGGTGACAAAGGAGAAGGAGAAGAAAGTGGGGCT
GTATACAATCTACGTGAACCCTGCCAATACCCACCAGTTTGCAGTGGGTGGACGCGATCAGTTT
GTTAGGATTTATGACCAGAGGAAAATTGATGAGAATGAGAACAATGGTGTCCTGAAAAAATTCT
GTCCTCACCACTTGGTGAACAGTGAGTCCAAAGCAAACATCACCTGTCTTGTGTACAGCCACGA
CGGCACAGAGCTCCTGGCCAGTTACAATGATGAAGACATTTACCTTTTCAACTCTTCTCACAGT
GATGGGGCCCAGTATATTAAGAGATATAAAGGTCATAGAAATAATGCTACAGTAAAAGGCGTCA
ATTTCTATGGCCCCAAGAGTGAGTTTGTGGTGAGCGGTAGTGACTGTGGTCACATCTTCCTCTG
GGAGAAGTCATCTTGCCAGATCATTCAGTTCATGGAAGGGGACAAGGGAGGTGTGGTAAACTGT
CTTGAGCCCCATCCTCACCTACCTGTTTTGGCAACCAGTGGCCTAGACCATGATGTGAAGATCT
GGGCACCAACAGCAGAAGCCTCCACTGAGCTAACAGGGTTAAAGGATGTGATCAAGAAGAACAA
GCGAGAGCGGGATGAGGACAGCTTGCATCACACTGACCTGTTTGATAGTCACATGCTGTGGTTC
CTTATGCACCACCTGAGACAGAGACGCCATCATCGGCGCTGGCGAGAACCTGGGGTTGGGGCCA
CAGATGCGGACTCTGATGAGTCTCCCAGCTCCTCAGACACATCGGACGAGGAGGAGGGCCCTGA
CCGGGTGCAGTGCATGCCATCCTGAGGCCCCAAACTTGGGAGGGATGGGCCGGGGCTGCTGACC
CGCTCCTGCCTGGGCAGCTCTTTTTCAGCCCCAGGCCCTTACATTCAACAGAAATGCACTTTGG
ACTTTTTGTTTAAATAAAAGAAAGCTATCTGAGGAGGACAGAGCACGGGAGGTTGAGCCAGCAG
AGAACCCCTAGAAGTGAGAGATGAGACCGAGCCCTGAATGAGGTTCCATGGAAGGTGCGAAGGA
CTCAGAGAAGTGGGCCTTTCCCTGAAGCCTTTCGTCAACTGGCTTCTTTTTCTTCTTTTTCTTT
AACCTCCCTTGTTTCTTTTGGAGGGTGGGGGGTGTAGTACCAACGGGCCAGAGAGAAGGGTAGG
AAGGCCGCTCTCTTTGGTTTAGGGTTTTCACCTTTTTTTCCCTTTGTTTTTTAAGAAGTCTGAC
AGTTGCATTAGGGGGGTTTTTGTTTGTTTTCTTTTTTTGTTTTTTTTTTTTTTTGTTTTTTTTT
GGGGGGGGGTTGCCCCTGAGCAAGCACATCCCAGGATCCTGTTTTTCTGGGAAATCCTTAAGAG
CCCCCAGCCATCCCAGCACCCCCTCTCTCTCCCTCCCACAACACTTAATTCTCTGTCCTTACCA
CAGTACTTTGCTCTCTCTTCATCCGTCACCCTCTAAATGGGGTCTGGGATGGAGACTGGAGATG
TGGGAGGGTCAAGAGGTGGAAGAACAGGAAAAGTTACCTCTTGGTTTTGTTTTTAACTGTTCAG
TGGCAGCAATTTCCCTGTCCCTATCACTGTTAGAGGCCTAATTTTATATCTATAAATATATTAA
AAAGCAAGTTAAACTTGGATGTATCAAGTTAAAATTATTGTCAGAAGTTTAAATACCTATATAT
TCTCTATGAACACAATGCAATAAAGGGGCTGGAAGACGAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAA

hide sequence

RefSeq Acc Id:

XM_006250297 ⟹ XP_006250359

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	13	87,141,940 - 87,189,873 (+)	NCBI
mRatBN7.2	13	84,609,838 - 84,657,501 (+)	NCBI
Rnor_6.0	13	90,532,153 - 90,579,530 (+)	NCBI
Rnor_5.0	13	95,053,210 - 95,114,044 (+)	NCBI

Sequence:

show sequence

CAGGAGGGTTGGGAGCCCAGAGCTCGCGGGACCGCTCTCGCTCAGTCGCCTCCAGCACAGCGTC
GCAAACCCCGCCGGAAAGCGTGACGGCGCAGGCGCAGGCGCGGAGACCCGAGACGGTGGTGGTG
GCTGCCGCTGGCCAGTTTCTTCAGCGAACCTTCAGACCAGTTTTCTCAGGATCGTGGGCCAGAC
TTCGGTCGGCGATAAAAACAGCAAGGCTGGCTACCATATTCAAGATGTCCAGTAAAAGGCCCAG
CACAGATGGGAGAAGAGACTTGGCTAACGGAAGCCTGTCTAGCAGTCCAGAAGAAATGTCTGGA
GCTGAAGAAGGGAGGGAAACATCTTCGGGGATTGAAGTAGAGGCCTCAGACCTGAGTTTGAGCT
TGACTGGGGACGATGGTGGCCCCAACCGCACCAGCACAGAAAGTCGTGGCACAGACACAGAGAG
CTCAGGTGAAGAAAAGGACTCTGACAGCATGGAGGACACAGGCCATTATTCCATCAACGATGAA
AACCGAGTTCACGGCCACTCAGATGAAGAGGAGGAGGAGGAGCAACCTCGGCACCGAGTCCAGC
GCAAACGGGCCAGCCGTGACCAGGACTCATCAGATGATGAGCGAGCCCTGGAAGACTGGGTATC
TTCAGAGACAACAGCTTTACCCCGGCCTCGCTGGCAAGCCCTTCCTGCCCTTCGGGAGCGGGAA
TTGGGTTCAAGTGCCCGCTTTGTGTATGAGGCTTGTGGAGCAAGAGTCTTTGTACAGCGTTTCC
GCCTGCAGCATGGGCTTGAGGGCCATACAGGTTGTGTCAATACTTTGCACTTTAACCAGCGTGG
CACCTGGCTGGCCAGTGGCAGTGATGACCTGAAGGTGGTAGTGTGGGATTGGGTGCGGCGGCAG
CCCGTACTGGACTTTGAGAGTGGCCACAAAAGTAATGTCTTCCAGGCCAAGTTCCTTCCTAACA
GTGGTGACTCCACCCTGGCTATGTGTGCCCGGGATGGGCAGGTCCGAGTCGCAGAACTGTCTGC
TACACAGTGCTGCAAGAACACCAAGCGTGTGGCCCAGCACAAGGGAGCATCCCACAAGTTGGCC
CTAGAACCAGACTCTCCCTGCACGTTCCTGTCGGCTGGTGAAGATGCCGTTGTCTTCACCATCG
ACCTAAGACAAGACCGGCCAGCTTCGAAACTGGTGGTGACAAAGGAGAAGGAGAAGAAAGTGGG
GCTGTATACAATCTACGTGAACCCTGCCAATACCCACCAGTTTGCAGTGGGTGGACGCGATCAG
TTTGTTAGGATTTATGACCAGAGGAAAATTGATGAGAATGAGAACAATGGTGTCCTGAAAAAAT
TCTGTCCTCACCACTTGGTGAACAGTGAGTCCAAAGCAAACATCACCTGTCTTGTGTACAGCCA
CGACGGCACAGAGCTCCTGGCCAGTTACAATGATGAAGACATTTACCTTTTCAACTCTTCTCAC
AGTGATGGGGCCCAGTATATTAAGAGATATAAAGGTCATAGAAATAATGCTACAGTAAAAGGCG
TCAATTTCTATGGCCCCAAGAGTGAGTTTGTGGTGAGCGGTAGTGACTGTGGTCACATCTTCCT
CTGGGAGAAGTCATCTTGCCAGATCATTCAGTTCATGGAAGGGGACAAGGGAGGTGTGGTAAAC
TGTCTTGAGCCCCATCCTCACCTACCTGTTTTGGCAACCAGTGGCCTAGACCATGATGTGAAGA
TCTGGGCACCAACAGCAGAAGCCTCCACTGAGCTAACAGGGTTAAAGGATGTGATCAAGAAGAA
CAAGCGAGAGCGGGATGAGGACAGCTTGCATCACACTGACCTGTTTGATAGTCACATGCTGTGG
TTCCTTATGCACCACCTGAGACAGAGACGCCATCATCGGCGCTGGCGAGAACCTGGGGTTGGGG
CCACAGATGCGGACTCTGATGAGTCTCCCAGCTCCTCAGACACATCGGACGAGGAGGAGGGCCC
TGACCGGGTGCAGTGCATGCCATCCTGAGGCCCCAAACTTGGGAGGGATGGGCCGGGGCTGCTG
ACCCGCTCCTGCCTGGGCAGCTCTTTTTCAGCCCCAGGCCCTTACATTCAACAGAAATGCACTT
TGGACTTTTTGTTTAAATAAAAGAAAGCTATCTGAGGAGGACAGAGCACGGGAGGTTGAGCCAG
CAGAGAACCCCTAGAAGTGAGAGATGAGACCGAGCCCTGAATGAGGTTCCATGGAAGGTGCGAA
GGACTCAGAGAAGTGGGCCTTTCCCTGAAGCCTTTCGTCAACTGGCTTCTTTTTCTTCTTTTTC
TTTAACCTCCCTTGTTTCTTTTGGAGGGTGGGGGGTGTAGTACCAACGGGCCAGAGAGAAGGGT
AGGAAGGCCGCTCTCTTTGGTTTAGGGTTTTCACCTTTTTTTCCCTTTGTTTTTTAAGAAGTCT
GACAGTTGCATTAGGGGGGTTTTTGTTTGTTTTCTTTTTTTGTTTTTTTTTTTTTTTGTTTTTT
TTTGGGGGGGGGTTGCCCCTGAGCAAGCACATCCCAGGATCCTGTTTTTCTGGGAAATCCTTAA
GAGCCCCCAGCCATCCCAGCACCCCCTCTCTCTCCCTCCCACAACACTTAATTCTCTGTCCTTA
CCACAGTACTTTGCTCTCTCTTCATCCGTCACCCTCTAAATGGGGTCTGGGATGGAGACTGGAG
ATGTGGGAGGGTCAAGAGGTGGAAGAACAGGAAAAGTTACCTCTTGGTTTTGTTTTTAACTGTT
CAGTGGCAGCAATTTCCCTGTCCCTATCACTGTTAGAGGCCTAATTTTATATCTATAAATATAT
TAAAAAGCAAGTTAAACTTGGATGTATCAAGTTAAAATTATTGTCAGAAGTTTAAATACCTATA
TATTCTCTATGAACACAATGCAATAAAGGGGCTGGAAGACGAATGAGCGAGAGTGATGCTGTAG
AGGTGGGGTGGGCCAGCCGATTGACCATCATGGTTGCTGGCAGAGCCTAGGGCTTCCCTGGAGC
TTTTACAACGCTTAAGGATGGGAGGCTATTCAGCTGTGCCCTTCTCGGCCTCAGCGCTGAGCTT
TAGAAAAACAAATTCAACTTTGCCTCAGGTCTCCTAATTTTTTTAAGTCTTGTGGAGGCTCCCA
AGATTGCTCCTCTCATTAGAGGCTGGCCTGTCCTTAAAACATGACTGAAGCGTGACTTCAGGAA
GGGGCATCACTGCTACAGACTGTCTCCTGGTTCTGTAGATGACAGAAAGCACTCTCGCCCTCCC
TTTAGCTGCTTGATTCTTTAAGCATTCAACTCCACACCAGCTCCCTTCCTAATGGAAGGATGAA
GGGAGAACTTCCGGGAATCAAGGGACAAGCCAGTAACTGAAGGATTTATTCTGGTGACTGGGGC
TTAGACACCTGTCTTCAGCACTGGCCACTGAGTATGAAAGTCCCTGTGGAACTCTTACCCTAAA
TGCTTGCACTACTCTTCCTATACCCATGGTGTTCACAAGATCCAGTCAGGAATCCTGCATCATG
GGATGGCTGGATTTGACCTCACTGGGCCAGGAGGAAGGGGGAGAGTGGAGGGTGATGCCCTACA
CACTTTCCTCCTGACCCCGTCCAGCAGCGCAGACCAGATGCCAGCTGCTGGTCTTCCTTCGTGA
GAGGGGAGTGTGTGGTAACTGAGTAGTCTTATGTCCTCACTGCTAGAGGGATGATGAGGTGGGC
TTAAAACCATGCACTCTGGAATTTGTTGTATTTTTTCTCAGTAAAGCTTTTCCCCTGACTGCTG
C

hide sequence

RefSeq Acc Id:

XM_006250298 ⟹ XP_006250360

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	13	87,143,568 - 87,189,873 (+)	NCBI
mRatBN7.2	13	84,611,191 - 84,657,501 (+)	NCBI
Rnor_6.0	13	90,532,473 - 90,579,530 (+)	NCBI
Rnor_5.0	13	95,053,210 - 95,114,044 (+)	NCBI

Sequence:

show sequence

GTTTAGTCCGGCTCGGCCTGTTTCCCCTCTCCCTGACTGCTCTCCCGCAGGACAGGCCCGATCC
CTTTCCTAAAACTCCCAGACTTTAGGTCTTATTCCCCTTCACCCGCGTCAGTGCTGGGAGGACT
ACCTGTCCTTTGCCCGGGTCAGTCTGGGTTGCCCCCTAGGGCACCCCCATGATTCACAGGGACT
TCTTGTTCGTCCGGTGACCTATTCGTAAACTCTCATTTCTTCTTCCTTTATAATTTGGGGACCC
GGCTCTGTCTGTGTCTCCTAGTCACTTCAGGGCCACCGCGCAATGTGCCCCTTCCCCCATCCCA
AGTTCTCAGGCCCAGCACCTCGTACGGAAGGCCGAGGTCCAAGAAACTGGCAGCCTGTTCTTGA
GTGCTTTGTGATCTAGTTCTCTTAGCGTACCTGCCCCTGTCCCGAAATCTTTTAGGACACCTTA
GAACGGTCCCGCTTGGTCCTTATTAGTTGGAAAGCATCTGGTGGCTTGAATTTCTGACTCATGA
TTGTTGGTGTAGTCTGTAAACAAACCCGCACTAGAGCTATCACATTCTCCCCCGGATTCTCCCC
TCCCCCACTGCTCTGTAGTTTGTCGAGAGGGGTGGTTTGGTTTAGAGTTGAAAAGATGCAGGTT
TTCCTCATAAGTGACTTTTTAGTGTTGGTGGAGCTGGGAGATAATTTGCCTGGCGTTTAAATCT
TGTGTTAATCCTTTGTGTTTCCATTACTGGCATGGGTTTTGTTCAGTAGTCAGAATTGAATTCG
TTCTTCAGCGAACCTTCAGACCAGTTTTCTCAGGATCGTGGGCCAGACTTCGGTCGGCGATAAA
AACAGCAAGGCTGGCTACCATATTCAAGATGTCCAGTAAAAGGCCCAGCACAGATGGGAGAAGA
GACTTGGCTAACGGAAGCCTGTCTAGCAGTCCAGAAGAAATGTCTGGAGCTGAAGAAGGGAGGG
AAACATCTTCGGGGATTGAAGTAGAGGCCTCAGACCTGAGTTTGAGCTTGACTGGGGACGATGG
TGGCCCCAACCGCACCAGCACAGAAAGTCGTGGCACAGACACAGAGAGCTCAGGTGAAGAAAAG
GACTCTGACAGCATGGAGGACACAGGCCATTATTCCATCAACGATGAAAACCGAGTTCACGGCC
ACTCAGATGAAGAGGAGGAGGAGGAGCAACCTCGGCACCGAGTCCAGCGCAAACGGGCCAGCCG
TGACCAGGACTCATCAGATGATGAGCGAGCCCTGGAAGACTGGGTATCTTCAGAGACAACAGCT
TTACCCCGGCCTCGCTGGCAAGCCCTTCCTGCCCTTCGGGAGCGGGAATTGGGTTCAAGTGCCC
GCTTTGTGTATGAGGCTTGTGGAGCAAGAGTCTTTGTACAGCGTTTCCGCCTGCAGCATGGGCT
TGAGGGCCATACAGGTTGTGTCAATACTTTGCACTTTAACCAGCGTGGCACCTGGCTGGCCAGT
GGCAGTGATGACCTGAAGGTGGTAGTGTGGGATTGGGTGCGGCGGCAGCCCGTACTGGACTTTG
AGAGTGGCCACAAAAGTAATGTCTTCCAGGCCAAGTTCCTTCCTAACAGTGGTGACTCCACCCT
GGCTATGTGTGCCCGGGATGGGCAGGTCCGAGTCGCAGAACTGTCTGCTACACAGTGCTGCAAG
AACACCAAGCGTGTGGCCCAGCACAAGGGAGCATCCCACAAGTTGGCCCTAGAACCAGACTCTC
CCTGCACGTTCCTGTCGGCTGGTGAAGATGCCGTTGTCTTCACCATCGACCTAAGACAAGACCG
GCCAGCTTCGAAACTGGTGGTGACAAAGGAGAAGGAGAAGAAAGTGGGGCTGTATACAATCTAC
GTGAACCCTGCCAATACCCACCAGTTTGCAGTGGGTGGACGCGATCAGTTTGTTAGGATTTATG
ACCAGAGGAAAATTGATGAGAATGAGAACAATGGTGTCCTGAAAAAATTCTGTCCTCACCACTT
GGTGAACAGTGAGTCCAAAGCAAACATCACCTGTCTTGTGTACAGCCACGACGGCACAGAGCTC
CTGGCCAGTTACAATGATGAAGACATTTACCTTTTCAACTCTTCTCACAGTGATGGGGCCCAGT
ATATTAAGAGATATAAAGGTCATAGAAATAATGCTACAGTAAAAGGCGTCAATTTCTATGGCCC
CAAGAGTGAGTTTGTGGTGAGCGGTAGTGACTGTGGTCACATCTTCCTCTGGGAGAAGTCATCT
TGCCAGATCATTCAGTTCATGGAAGGGGACAAGGGAGGTGTGGTAAACTGTCTTGAGCCCCATC
CTCACCTACCTGTTTTGGCAACCAGTGGCCTAGACCATGATGTGAAGATCTGGGCACCAACAGC
AGAAGCCTCCACTGAGCTAACAGGGTTAAAGGATGTGATCAAGAAGAACAAGCGAGAGCGGGAT
GAGGACAGCTTGCATCACACTGACCTGTTTGATAGTCACATGCTGTGGTTCCTTATGCACCACC
TGAGACAGAGACGCCATCATCGGCGCTGGCGAGAACCTGGGGTTGGGGCCACAGATGCGGACTC
TGATGAGTCTCCCAGCTCCTCAGACACATCGGACGAGGAGGAGGGCCCTGACCGGGTGCAGTGC
ATGCCATCCTGAGGCCCCAAACTTGGGAGGGATGGGCCGGGGCTGCTGACCCGCTCCTGCCTGG
GCAGCTCTTTTTCAGCCCCAGGCCCTTACATTCAACAGAAATGCACTTTGGACTTTTTGTTTAA
ATAAAAGAAAGCTATCTGAGGAGGACAGAGCACGGGAGGTTGAGCCAGCAGAGAACCCCTAGAA
GTGAGAGATGAGACCGAGCCCTGAATGAGGTTCCATGGAAGGTGCGAAGGACTCAGAGAAGTGG
GCCTTTCCCTGAAGCCTTTCGTCAACTGGCTTCTTTTTCTTCTTTTTCTTTAACCTCCCTTGTT
TCTTTTGGAGGGTGGGGGGTGTAGTACCAACGGGCCAGAGAGAAGGGTAGGAAGGCCGCTCTCT
TTGGTTTAGGGTTTTCACCTTTTTTTCCCTTTGTTTTTTAAGAAGTCTGACAGTTGCATTAGGG
GGGTTTTTGTTTGTTTTCTTTTTTTGTTTTTTTTTTTTTTTGTTTTTTTTTGGGGGGGGGTTGC
CCCTGAGCAAGCACATCCCAGGATCCTGTTTTTCTGGGAAATCCTTAAGAGCCCCCAGCCATCC
CAGCACCCCCTCTCTCTCCCTCCCACAACACTTAATTCTCTGTCCTTACCACAGTACTTTGCTC
TCTCTTCATCCGTCACCCTCTAAATGGGGTCTGGGATGGAGACTGGAGATGTGGGAGGGTCAAG
AGGTGGAAGAACAGGAAAAGTTACCTCTTGGTTTTGTTTTTAACTGTTCAGTGGCAGCAATTTC
CCTGTCCCTATCACTGTTAGAGGCCTAATTTTATATCTATAAATATATTAAAAAGCAAGTTAAA
CTTGGATGTATCAAGTTAAAATTATTGTCAGAAGTTTAAATACCTATATATTCTCTATGAACAC
AATGCAATAAAGGGGCTGGAAGACGAATGAGCGAGAGTGATGCTGTAGAGGTGGGGTGGGCCAG
CCGATTGACCATCATGGTTGCTGGCAGAGCCTAGGGCTTCCCTGGAGCTTTTACAACGCTTAAG
GATGGGAGGCTATTCAGCTGTGCCCTTCTCGGCCTCAGCGCTGAGCTTTAGAAAAACAAATTCA
ACTTTGCCTCAGGTCTCCTAATTTTTTTAAGTCTTGTGGAGGCTCCCAAGATTGCTCCTCTCAT
TAGAGGCTGGCCTGTCCTTAAAACATGACTGAAGCGTGACTTCAGGAAGGGGCATCACTGCTAC
AGACTGTCTCCTGGTTCTGTAGATGACAGAAAGCACTCTCGCCCTCCCTTTAGCTGCTTGATTC
TTTAAGCATTCAACTCCACACCAGCTCCCTTCCTAATGGAAGGATGAAGGGAGAACTTCCGGGA
ATCAAGGGACAAGCCAGTAACTGAAGGATTTATTCTGGTGACTGGGGCTTAGACACCTGTCTTC
AGCACTGGCCACTGAGTATGAAAGTCCCTGTGGAACTCTTACCCTAAATGCTTGCACTACTCTT
CCTATACCCATGGTGTTCACAAGATCCAGTCAGGAATCCTGCATCATGGGATGGCTGGATTTGA
CCTCACTGGGCCAGGAGGAAGGGGGAGAGTGGAGGGTGATGCCCTACACACTTTCCTCCTGACC
CCGTCCAGCAGCGCAGACCAGATGCCAGCTGCTGGTCTTCCTTCGTGAGAGGGGAGTGTGTGGT
AACTGAGTAGTCTTATGTCCTCACTGCTAGAGGGATGATGAGGTGGGCTTAAAACCATGCACTC
TGGAATTTGTTGTATTTTTTCTCAGTAAAGCTTTTCCCCTGACTGCTGC

hide sequence

RefSeq Acc Id:

XM_063272520 ⟹ XP_063128590

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	13	87,142,608 - 87,199,859 (+)	NCBI

RefSeq Acc Id:

XM_063272522 ⟹ XP_063128592

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	13	87,142,608 - 87,199,859 (+)	NCBI

RefSeq Acc Id:

XR_010056926

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	13	87,142,608 - 87,186,656 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001014253	(Get FASTA)	NCBI Sequence Viewer
	NP_001416841	(Get FASTA)	NCBI Sequence Viewer
	NP_001416842	(Get FASTA)	NCBI Sequence Viewer
	NP_001416843	(Get FASTA)	NCBI Sequence Viewer
	NP_001416844	(Get FASTA)	NCBI Sequence Viewer
	XP_006250359	(Get FASTA)	NCBI Sequence Viewer
	XP_006250360	(Get FASTA)	NCBI Sequence Viewer
	XP_063128590	(Get FASTA)	NCBI Sequence Viewer
	XP_063128592	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH85957	(Get FASTA)	NCBI Sequence Viewer
	EDL94687	(Get FASTA)	NCBI Sequence Viewer
	EDL94688	(Get FASTA)	NCBI Sequence Viewer
	EDL94689	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000008944
	ENSRNOP00000070721
	ENSRNOP00000095537
	ENSRNOP00000095537.1
GenBank Protein	Q5U2M6	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_001014253 ⟸ NM_001014231

- UniProtKB:

Q5U2M6 (UniProtKB/Swiss-Prot), A6JG32 (UniProtKB/TrEMBL), A0A8L2Q3J7 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MSSKRPSTDGRRDLANGSLSSSPEEMSGAEEGRETSSGIEVEASDLSLSLTGDDGGPNRTSTES
RGTDTESSGEEKDSDSMEDTGHYSINDENRVHGHSDEEEEEEQPRHRVQRKRASRDQDSSDDER
ALEDWVSSETTALPRPRWQALPALRERELGSSARFVYEACGARVFVQRFRLQHGLEGHTGCVNT
LHFNQRGTWLASGSDDLKVVVWDWVRRQPVLDFESGHKSNVFQAKFLPNSGDSTLAMCARDGQV
RVAELSATQCCKNTKRVAQHKGASHKLALEPDSPCTFLSAGEDAVVFTIDLRQDRPASKLVVTK
EKEKKVGLYTIYVNPANTHQFAVGGRDQFVRIYDQRKIDENENNGVLKKFCPHHLVNSESKANI
TCLVYSHDGTELLASYNDEDIYLFNSSHSDGAQYIKRYKGHRNNATVKGVNFYGPKSEFVVSGS
DCGHIFLWEKSSCQIIQFMEGDKGGVVNCLEPHPHLPVLATSGLDHDVKIWAPTAEASTELTGL
KDVIKKNKRERDEDSLHHTDLFDSHMLWFLMHHLRQRRHHRRWREPGVGATDADSDESPSSSDT
SDEEEGPDRVQCMPS

hide sequence

RefSeq Acc Id:

XP_006250359 ⟸ XM_006250297

- Peptide Label:

isoform X1

- Sequence:

show sequence

MSSKRPSTDGRRDLANGSLSSSPEEMSGAEEGRETSSGIEVEASDLSLSLTGDDGGPNRTSTES
RGTDTESSGEEKDSDSMEDTGHYSINDENRVHGHSDEEEEEEQPRHRVQRKRASRDQDSSDDER
ALEDWVSSETTALPRPRWQALPALRERELGSSARFVYEACGARVFVQRFRLQHGLEGHTGCVNT
LHFNQRGTWLASGSDDLKVVVWDWVRRQPVLDFESGHKSNVFQAKFLPNSGDSTLAMCARDGQV
RVAELSATQCCKNTKRVAQHKGASHKLALEPDSPCTFLSAGEDAVVFTIDLRQDRPASKLVVTK
EKEKKVGLYTIYVNPANTHQFAVGGRDQFVRIYDQRKIDENENNGVLKKFCPHHLVNSESKANI
TCLVYSHDGTELLASYNDEDIYLFNSSHSDGAQYIKRYKGHRNNATVKGVNFYGPKSEFVVSGS
DCGHIFLWEKSSCQIIQFMEGDKGGVVNCLEPHPHLPVLATSGLDHDVKIWAPTAEASTELTGL
KDVIKKNKRERDEDSLHHTDLFDSHMLWFLMHHLRQRRHHRRWREPGVGATDADSDESPSSSDT
SDEEEGPDRVQCMPS

hide sequence

RefSeq Acc Id:

XP_006250360 ⟸ XM_006250298

- Peptide Label:

isoform X1

- Sequence:

show sequence

MSSKRPSTDGRRDLANGSLSSSPEEMSGAEEGRETSSGIEVEASDLSLSLTGDDGGPNRTSTES
RGTDTESSGEEKDSDSMEDTGHYSINDENRVHGHSDEEEEEEQPRHRVQRKRASRDQDSSDDER
ALEDWVSSETTALPRPRWQALPALRERELGSSARFVYEACGARVFVQRFRLQHGLEGHTGCVNT
LHFNQRGTWLASGSDDLKVVVWDWVRRQPVLDFESGHKSNVFQAKFLPNSGDSTLAMCARDGQV
RVAELSATQCCKNTKRVAQHKGASHKLALEPDSPCTFLSAGEDAVVFTIDLRQDRPASKLVVTK
EKEKKVGLYTIYVNPANTHQFAVGGRDQFVRIYDQRKIDENENNGVLKKFCPHHLVNSESKANI
TCLVYSHDGTELLASYNDEDIYLFNSSHSDGAQYIKRYKGHRNNATVKGVNFYGPKSEFVVSGS
DCGHIFLWEKSSCQIIQFMEGDKGGVVNCLEPHPHLPVLATSGLDHDVKIWAPTAEASTELTGL
KDVIKKNKRERDEDSLHHTDLFDSHMLWFLMHHLRQRRHHRRWREPGVGATDADSDESPSSSDT
SDEEEGPDRVQCMPS

hide sequence

Ensembl Acc Id:

ENSRNOP00000008944 ⟸ ENSRNOT00000008944

Ensembl Acc Id:

ENSRNOP00000070721 ⟸ ENSRNOT00000082469

Ensembl Acc Id:

ENSRNOP00000083449 ⟸ ENSRNOT00000104949

Ensembl Acc Id:

ENSRNOP00000095537 ⟸ ENSRNOT00000101398

RefSeq Acc Id:	XP_063128592 ⟸ XM_063272522
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_063128590 ⟸ XM_063272520
- Peptide Label:	isoform X2

Ensembl Acc Id:

ENSRNOP00000111979 ⟸ ENSRNOT00000126224

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q5U2M6-F1-model_v2	AlphaFold	Q5U2M6	1-591	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13699020

Promoter ID:

EPDNEW_R9545

Type:

initiation region

Name:

Dcaf8_1

Description:

DDB1 and CUL4 associated factor 8

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	13	90,532,294 - 90,532,354	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1308513	AgrOrtholog
BioCyc Gene	G2FUF-17330	BioCyc
Ensembl Genes	ENSRNOG00000006785	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript	ENSRNOT00000008944	ENTREZGENE
	ENSRNOT00000082469	ENTREZGENE
	ENSRNOT00000101398	ENTREZGENE
	ENSRNOT00000101398.1	UniProtKB/Swiss-Prot
Gene3D-CATH	2.130.10.10	UniProtKB/Swiss-Prot
IMAGE_CLONE	IMAGE:7134976	IMAGE-MGC_LOAD
InterPro	DCAF8	UniProtKB/Swiss-Prot
	WD40/YVTN_repeat-like_dom_sf	UniProtKB/Swiss-Prot
	WD40_repeat	UniProtKB/Swiss-Prot
	WD40_repeat_dom_sf	UniProtKB/Swiss-Prot
KEGG Report	rno:364050	UniProtKB/Swiss-Prot
MGC_CLONE	MGC:95309	IMAGE-MGC_LOAD
NCBI Gene	364050	ENTREZGENE
PANTHER	DDB1- AND CUL4-ASSOCIATED FACTOR 8	UniProtKB/Swiss-Prot
	PTHR15574	UniProtKB/Swiss-Prot
Pfam	WD40	UniProtKB/Swiss-Prot
PhenoGen	Dcaf8	PhenoGen
PROSITE	WD_REPEATS_2	UniProtKB/Swiss-Prot
	WD_REPEATS_REGION	UniProtKB/Swiss-Prot
RatGTEx	ENSRNOG00000006785	RatGTEx
SMART	WD40	UniProtKB/Swiss-Prot
Superfamily-SCOP	SSF50978	UniProtKB/Swiss-Prot
UniProt	A0A0G2JYN0	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I5ZX81_RAT	UniProtKB/TrEMBL
	A0A8L2Q3J7	ENTREZGENE, UniProtKB/TrEMBL
	A0ABK0M5N5_RAT	UniProtKB/TrEMBL
	A6JG32	ENTREZGENE, UniProtKB/TrEMBL
	DCAF8_RAT	UniProtKB/Swiss-Prot, ENTREZGENE

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2010-05-05	Dcaf8	DDB1 and CUL4 associated factor 8	Wdr42a	WD repeat domain 42A	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-02-26	Wdr42a	WD repeat domain 42A	RGD1308513	similar to expressed sequence AA408877	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2005-12-06	RGD1308513	similar to expressed sequence AA408877	RGD1308513_predicted	similar to expressed sequence AA408877 (predicted)	Symbol and Name updated	1559027	APPROVED
2005-01-20	RGD1308513_predicted	similar to expressed sequence AA408877 (predicted)	LOC364050_predicted		Symbol and Name status set to approved	1331353	APPROVED
2005-01-12	LOC364050_predicted	similar to expressed sequence AA408877 (predicted)			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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