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Gene: Mocos (molybdenum cofactor sulfurase) Rattus norvegicus

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Symbol:

Mocos

Name:

molybdenum cofactor sulfurase

RGD ID:

1308496

Description:

Predicted to enable molybdenum cofactor sulfurtransferase activity. Predicted to be involved in Mo-molybdopterin cofactor biosynthetic process. Human ortholog(s) of this gene implicated in xanthinuria type II. Orthologous to human MOCOS (molybdenum cofactor sulfurase); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 3-chloropropane-1,2-diol; 6-propyl-2-thiouracil.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

LOC361300

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	MOCOS (molybdenum cofactor sulfurase)	HGNC	Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, Panther
Mus musculus (house mouse):	Mocos (molybdenum cofactor sulfurase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Mocos (molybdenum cofactor sulfurase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	MOCOS (molybdenum cofactor sulfurase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	MOCOS (molybdenum cofactor sulfurase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Mocos (molybdenum cofactor sulfurase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	MOCOS (molybdenum cofactor sulfurase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	MOCOS (molybdenum cofactor sulfurase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Mocos (molybdenum cofactor sulfurase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Mocos (molybdenum cofactor sulfurase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	PIP4P1 (phosphatidylinositol-4,5-bisphosphate 4-phosphatase 1)	HGNC	OMA
Alliance orthologs ³
Homo sapiens (human):	MOCOS (molybdenum cofactor sulfurase)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Mocos (molybdenum cofactor sulfurase)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	mocos (molybdenum cofactor sulfurase)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	mocs-1	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	mal	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	mocos	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	18	16,206,402 - 16,251,928 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	18	16,206,402 - 16,251,928 (+)	Ensembl				GRCr8
mRatBN7.2	18	15,931,659 - 15,977,415 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	18	15,931,654 - 15,977,187 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	18	16,117,319 - 16,162,950 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	18	16,900,026 - 16,945,653 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	18	16,188,313 - 16,233,744 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	18	16,590,086 - 16,636,312 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	18	16,590,197 - 16,636,084 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	18	16,349,169 - 16,395,056 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	18	16,420,503 - 16,466,040 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	18	15,859,448 - 15,904,747 (+)	NCBI		Celera
RGSC_v3.1	18	16,447,589 - 16,492,609 (+)	NCBI
Cytogenetic Map	18	p12	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

autism spectrum disorder (ISO)

obstructive nephropathy (ISS)

pancytopenia (ISO)

primary hyperoxaluria (ISO)

vasculitis (ISO)

xanthinuria type II (ISO,ISS)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(+)-catechin (ISO)

(-)-epigallocatechin 3-gallate (ISO)

(1->4)-beta-D-glucan (ISO)

1,2-dimethylhydrazine (ISO)

1-nitropyrene (ISO)

17alpha-ethynylestradiol (ISO)

17beta-estradiol (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

3,7-dihydropurine-6-thione (ISO)

3-chloropropane-1,2-diol (EXP)

4,4'-sulfonyldiphenol (ISO)

4-hydroxynon-2-enal (ISO)

6-propyl-2-thiouracil (EXP)

6-Thiourate (ISO)

8-Br-cAMP (ISO)

amphetamine (EXP)

arsane (ISO)

arsenic atom (ISO)

arsenite(3-) (ISO)

arsenous acid (ISO)

atrazine (EXP)

azathioprine (ISO)

benzo[a]pyrene (ISO)

Benzo[k]fluoranthene (ISO)

bisphenol A (EXP,ISO)

bisphenol F (ISO)

bromobenzene (EXP)

butan-1-ol (ISO)

cadmium dichloride (ISO)

cadmium sulfate (ISO)

caffeine (ISO)

carbamazepine (ISO)

chromium(6+) (ISO)

cisplatin (ISO)

cobalt dichloride (EXP)

copper atom (ISO)

copper(0) (ISO)

copper(II) sulfate (ISO)

Cuprizon (EXP)

cyclosporin A (ISO)

diarsenic trioxide (ISO)

Didecyldimethylammonium (ISO)

dimethyl sulfoxide (ISO)

disodium selenite (ISO)

dorsomorphin (ISO)

doxorubicin (ISO)

endosulfan (EXP)

entinostat (ISO)

epoxiconazole (ISO)

etoposide (ISO)

genistein (ISO)

inulin (ISO)

isotretinoin (ISO)

lead diacetate (ISO)

lucanthone (ISO)

mercaptopurine (ISO)

metformin (EXP)

mitoxantrone (ISO)

N-benzyloxycarbonyl-L-leucyl-L-leucyl-L-leucinal (ISO)

N-methyl-4-phenylpyridinium (ISO)

paracetamol (EXP,ISO)

pentachlorophenol (ISO)

perfluorohexanesulfonic acid (ISO)

perfluorononanoic acid (ISO)

perfluorooctane-1-sulfonic acid (ISO)

phenylmercury acetate (ISO)

potassium chromate (ISO)

purine-6-thiol (ISO)

quercetin (ISO)

SB 431542 (ISO)

silicon dioxide (ISO)

silver atom (ISO)

silver(0) (ISO)

sodium arsenate (ISO)

sodium arsenite (ISO)

succimer (ISO)

sunitinib (ISO)

temozolomide (ISO)

tioguanine (ISO)

trichloroethene (EXP)

trichostatin A (ISO)

triclosan (ISO)

valproic acid (ISO)

vinclozolin (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

Mo-molybdopterin cofactor biosynthetic process (IEA,ISO)

molybdopterin cofactor biosynthetic process (IEA,ISO)

molybdopterin cofactor metabolic process (IBA)

Molecular Function

catalytic activity (IEA)

lyase activity (IEA)

molybdenum cofactor sulfurtransferase activity (IBA,IEA,ISO)

molybdenum ion binding (IEA)

protein binding (ISO)

pyridoxal phosphate binding (IEA)

transferase activity (IEA)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	GOA pipeline	RGD automated data pipeline
3.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:11302742

Genomics

Comparative Map Data

Mocos
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	18	16,206,402 - 16,251,928 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	18	16,206,402 - 16,251,928 (+)	Ensembl				GRCr8
mRatBN7.2	18	15,931,659 - 15,977,415 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	18	15,931,654 - 15,977,187 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	18	16,117,319 - 16,162,950 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	18	16,900,026 - 16,945,653 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	18	16,188,313 - 16,233,744 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	18	16,590,086 - 16,636,312 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	18	16,590,197 - 16,636,084 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	18	16,349,169 - 16,395,056 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	18	16,420,503 - 16,466,040 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	18	15,859,448 - 15,904,747 (+)	NCBI		Celera
RGSC_v3.1	18	16,447,589 - 16,492,609 (+)	NCBI
Cytogenetic Map	18	p12	NCBI

MOCOS
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	18	36,187,497 - 36,272,157 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	18	36,186,894 - 36,272,157 (+)	Ensembl			hg38	GRCh38
GRCh37	18	33,767,460 - 33,852,120 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	18	32,021,478 - 32,102,683 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	18	32,021,479 - 32,102,682	NCBI
Celera	18	30,575,346 - 30,656,592 (+)	NCBI		Celera
Cytogenetic Map	18	q12.2	NCBI
HuRef	18	30,626,379 - 30,707,547 (+)	NCBI		HuRef
CHM1_1	18	33,694,591 - 33,775,784 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	18	36,379,059 - 36,463,756 (+)	NCBI		T2T-CHM13v2.0

Mocos
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	18	24,786,538 - 24,834,634 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	18	24,786,748 - 24,834,632 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	18	24,653,492 - 24,701,577 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	18	24,653,691 - 24,701,575 (+)	Ensembl			mm10	GRCm38
MGSCv37	18	24,812,192 - 24,860,057 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	18	24,796,497 - 24,844,587 (+)	NCBI		MGSCv36	mm8
Celera	18	25,135,661 - 25,183,078 (+)	NCBI		Celera
Cytogenetic Map	18	A2	NCBI
cM Map	18	13.18	NCBI

Mocos
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955402	22,754,064 - 22,808,167 (+)	Ensembl
ChiLan1.0	NW_004955402	22,754,034 - 22,808,428 (+)	NCBI	ChiLan1.0	ChiLan1.0

MOCOS
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	17	53,583,357 - 53,667,798 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	18	39,275,899 - 39,381,547 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	18	29,440,016 - 29,542,105 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	18	32,998,527 - 33,080,053 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	18	32,998,769 - 33,080,053 (+)	Ensembl			panPan2	panpan1.1

MOCOS
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	7	53,950,561 - 54,002,046 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	7	53,945,436 - 54,002,252 (-)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	7	53,373,914 - 53,427,347 (-)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	7	53,918,314 - 53,971,999 (-)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	7	53,913,166 - 53,972,004 (-)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	7	53,601,974 - 53,655,234 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	7	53,625,167 - 53,678,696 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	7	53,917,631 - 53,971,177 (-)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Mocos
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404944	49,728,523 - 49,778,989 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936517	9,055,805 - 9,105,357 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936517	9,059,042 - 9,105,304 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

MOCOS
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	6	119,945,052 - 120,018,097 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	6	119,945,076 - 120,018,332 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	6	112,471,601 - 112,544,699 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

MOCOS
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	18	44,570,277 - 44,627,641 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	18	44,581,987 - 44,627,557 (-)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666050	19,026,451 - 19,088,270 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Mocos
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624779	10,500,772 - 10,545,503 (+)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624779	10,500,696 - 10,547,452 (+)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Mocos
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	15	19,176,553 - 19,221,499 (-)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Mocos
468 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	33
Count of miRNA genes:	33
Interacting mature miRNAs:	33
Transcripts:	ENSRNOT00000066583
Prediction methods:	Miranda, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
2301410	Bp317	Blood pressure QTL 317		0.004	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	18	12219237	26822399	Rat
2301409	Cm70	Cardiac mass QTL 70		0.001	heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	18	7065728	52065728	Rat
1331735	Rf44	Renal function QTL 44	2.981		urine total protein amount (VT:0000032)	urine total protein excretion rate (CMO:0000756)	18	15642280	31610627	Rat
61382	Bp46	Blood pressure QTL 46	18.8		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	18	12216684	31644508	Rat
12904716	Am21	Aortic mass QTL 21		0.005	aorta mass (VT:0002845)	aorta weight to aorta length to body weight ratio (CMO:0002722)	18	7065728	52065728	Rat
8552968	Pigfal19	Plasma insulin-like growth factor 1 level QTL 19	11.4		blood insulin-like growth factor amount (VT:0010479)	plasma insulin-like growth factor 1 level (CMO:0001299)	18	1	26032889	Rat
12904714	Cm131	Cardiac mass QTL 131		0.002	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	18	7065728	52065728	Rat
12904715	Cm132	Cardiac mass QTL 132		0.001	heart right ventricle mass (VT:0007033)	heart right ventricle weight to body weight ratio (CMO:0000914)	18	7065728	52065728	Rat
1331781	Scl28	Serum cholesterol level QTL 28	3.995		blood HDL cholesterol amount (VT:0000184)	serum high density lipoprotein cholesterol level (CMO:0000361)	18	1	25071266	Rat
6903345	Bp349	Blood pressure QTL 349	3.9		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	18	3917226	48917226	Rat
2313082	Bss85	Bone structure and strength QTL 85	0.8	0.0001	long bone metaphysis morphology trait (VT:0000133)	tibia midshaft total cross-sectional area (CMO:0001715)	18	15226101	42690662	Rat
6903347	Bp350	Blood pressure QTL 350	4.4		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	18	1	31610627	Rat
2312568	Glom21	Glomerulus QTL 21	2	0.005	kidney glomerulus morphology trait (VT:0005325)	index of glomerular damage (CMO:0001135)	18	5460455	42690191	Rat
6903349	Bp351	Blood pressure QTL 351	3.5		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	18	3917226	48917226	Rat
6903351	Bp352	Blood pressure QTL 352	3.3		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	18	3917226	48917226	Rat
1331766	Bp236	Blood pressure QTL 236	3.022		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	18	1	31610627	Rat
631264	Scl22	Serum cholesterol level QTL 22	6.2		blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	18	12216684	31644508	Rat
1331775	Bp235	Blood pressure QTL 235	3.201		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	18	15642280	31610627	Rat
2325839	Bp348	Blood pressure QTL 348		0.001	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	18	1	44930869	Rat
12904680	Bw189	Body weight QTL 189		0.019	body mass (VT:0001259)	body weight (CMO:0000012)	18	12219237	26822399	Rat
2293708	Bss46	Bone structure and strength QTL 46	8.8	0.0001	lumbar vertebra morphology trait (VT:0010494)	lumbar vertebra cortical cross-sectional area (CMO:0001690)	18	12066482	57066482	Rat
1641910	Colcr3	Colorectal carcinoma resistance QTL 3	5.02	0.000007	intestine integrity trait (VT:0010554)	poorly differentiated malignant colorectal tumor number (CMO:0002076)	18	1	25022372	Rat
12904693	Am20	Aortic mass QTL 20		0.001	aorta mass (VT:0002845)	aorta weight to aorta length to body weight ratio (CMO:0002722)	18	12219237	26822399	Rat
1578667	Bss21	Bone structure and strength QTL 21	3.5		femur morphology trait (VT:0000559)	femoral neck cortical cross-sectional area (CMO:0001702)	18	12066482	85493247	Rat
12904695	Kidm73	Kidney mass QTL 73		0.001	kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	18	12219237	26822399	Rat
2312598	Bp340	Blood pressure QTL 340		0.05	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	18	3811902	30809809	Rat
12904689	Cm128	Cardiac mass QTL 128		0.001	heart mass (VT:0007028)	heart wet weight to body weight ratio (CMO:0002408)	18	12219237	26822399	Rat
12904690	Cm129	Cardiac mass QTL 129		0.001	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	18	12219237	26822399	Rat
2300180	Bmd67	Bone mineral density QTL 67	4.8	0.0001	femur mineral mass (VT:0010011)	bone mineral density (CMO:0001226)	18	1	34566578	Rat
12904691	Cm130	Cardiac mass QTL 130		0.001	heart right ventricle mass (VT:0007033)	heart right ventricle weight to body weight ratio (CMO:0000914)	18	12219237	26822399	Rat
9590248	Scort10	Serum corticosterone level QTL 10	19.71	0.001	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	18	1	26032889	Rat
2299160	Iddm35	Insulin dependent diabetes mellitus QTL 35	2.79		blood glucose amount (VT:0000188)	age at onset/diagnosis of type 1 diabetes mellitus (CMO:0001140)	18	4482648	49482648	Rat
1331753	Bp231	Blood pressure QTL 231	3.643		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	18	1	54490981	Rat
1578661	Bss20	Bone structure and strength QTL 20	3.7		femur morphology trait (VT:0000559)	femoral neck cross-sectional area (CMO:0001697)	18	12066482	85493247	Rat
11565454	Kidm59	Kidney mass QTL 59		0.001	kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	18	7065728	52065728	Rat
1331754	Bp230	Blood pressure QTL 230	4.61609		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	18	15642280	86134022	Rat
2293661	Bss50	Bone structure and strength QTL 50	4.64	0.0003	lumbar vertebra size trait (VT:0010518)	lumbar vertebra trabecular cross-sectional area (CMO:0001692)	18	1	34566578	Rat
61375	Bp41	Blood pressure QTL 41	2.4		blood pressure trait (VT:0000183)	systolic blood pressure (CMO:0000004)	18	4307354	49307354	Rat

Markers in Region

D18Chm6

Rat Assembly	Chr	Position (strand)	Source	JBrowse
GRCr8	18	16,208,753 - 16,208,950 (+)	Marker Load Pipeline
mRatBN7.2	18	15,934,010 - 15,934,209 (+)	MAPPER	mRatBN7.2
Rnor_6.0	18	16,592,554 - 16,592,748	NCBI	Rnor6.0
Rnor_5.0	18	16,351,526 - 16,351,720	UniSTS	Rnor5.0
RGSC_v3.4	18	16,422,860 - 16,423,054	UniSTS	RGSC3.4
Celera	18	15,861,805 - 15,862,005	UniSTS
Cytogenetic Map	18	p12	UniSTS

BE110321

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	18	15,976,997 - 15,977,148 (+)	MAPPER	mRatBN7.2
Rnor_6.0	18	16,635,895 - 16,636,045	NCBI	Rnor6.0
Rnor_5.0	18	16,394,867 - 16,395,017	UniSTS	Rnor5.0
RGSC_v3.4	18	16,465,851 - 16,466,001	UniSTS	RGSC3.4
Celera	18	15,904,558 - 15,904,708	UniSTS
RH 3.4 Map	18	186.0	UniSTS
Cytogenetic Map	18	p12	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	158	91	90	59	92	59	6	355	192	11	137	80	91	31	16	16

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001395671	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017600988	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063277463	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063277464	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_001842024	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_001842025	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_001842026	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_001842027	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	CH473974	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000018	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000066583 ⟹ ENSRNOP00000061024

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	18	16,206,402 - 16,247,554 (+)	Ensembl
mRatBN7.2 Ensembl	18	15,931,654 - 15,977,187 (+)	Ensembl
Rnor_6.0 Ensembl	18	16,590,197 - 16,636,084 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000093190

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0 Ensembl	18	16,590,590 - 16,624,520 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000093441 ⟹ ENSRNOP00000076247

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0 Ensembl	18	16,590,602 - 16,609,554 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000093449

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0 Ensembl	18	16,613,591 - 16,616,947 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000093641 ⟹ ENSRNOP00000076169

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0 Ensembl	18	16,616,937 - 16,636,082 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000093715 ⟹ ENSRNOP00000076171

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	18	16,206,402 - 16,251,928 (+)	Ensembl
mRatBN7.2 Ensembl	18	15,931,654 - 15,977,187 (+)	Ensembl
Rnor_6.0 Ensembl	18	16,590,408 - 16,636,064 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000122065 ⟹ ENSRNOP00000102927

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	18	16,215,261 - 16,251,928 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000129170 ⟹ ENSRNOP00000100317

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	18	16,206,402 - 16,247,554 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000148176 ⟹ ENSRNOP00000108340

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	18	16,206,802 - 16,251,928 (+)	Ensembl

RefSeq Acc Id:

NM_001395671 ⟹ NP_001382600

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	18	16,206,402 - 16,251,928 (+)	NCBI
mRatBN7.2	18	15,931,659 - 15,977,185 (+)	NCBI

RefSeq Acc Id:

XM_017600988 ⟹ XP_017456477

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	18	16,206,727 - 16,251,786 (+)	NCBI
mRatBN7.2	18	15,931,659 - 15,977,415 (+)	NCBI
Rnor_6.0	18	16,590,107 - 16,635,984 (+)	NCBI

Sequence:

show sequence

GGTGCAGGAGGTCACACCAGAGCGTCCGGCTCTGAAGTTGCATAATCGCTAGGAGTTTATCAAG
CAGCTCAATGGTTTCCTTTGAACCGCGGGGAGTGCAGTCGACCACAGCAGTCCAAGTGGACTTG
CTGGTCTGGAGCGCAGGGGGCAAGGATCCCAGGTTCTGGGCCAGTAGGACTCGGAGTCACATAT
GCCCAGGGGAAAAGACACGCACTCCGTTGTTCCTGCCACCTGCCTTACTGGCACCTAGACATCC
CAGGACTCGCACCCAGGTGTCTAGAGTGTCTCTTGGTCAGCGTTAGGCTGTGGCGGTCACCGCA
GAGTGCGCGACCGAGTTCTGTCCCAGGTGGGCAAAGGCCGCACCGAAGTGAAAGCTTTCAGTGA
GTCTGCGAGCTGCAAGGAGGCCGGCCCGCGAGGCACCGCCCATGGGTGGGGACCCGAGTCACCC
AGGGCTCAGCACTGGCGAAATCGCCTCCCTTGCTCACTTCCCGGGCTGGGCGGTCTAGATCCCG
TAGACTTCAGACGCGATCCATGGCCTGCGGGGCGACAGAGCGGGGCCCTGAGCCCCCGGCCTTC
CAGCGCCATCCAGAAGCCAGCGCACCGCGCCTGGCCCACGGCTACGGGTTGCGCAGCATGAGCG
AGCTGCGGGACCAGGAGTTTGGCCGCCTAGCAGGAACTGTCTATCTTGACCATGCAGGAGCCAC
CTTGTTCCCCCAGAGCCAGCTCACAAACTTCACTAAGGATCTCATGGAAAATGTCTATGGTAAT
CCTCACAGCCAGAACATCACCAGCAAACTCACCCATGACACGGTGGAGCAGGTCCGATACAGGG
TCCTGACTCACTTTCACACCACCCCAGAGGACTACAGCGTGATCTTCACAGCCGGGAGCACGGC
TGCTCTCAGGCTGGTGGCAGAGACCTTTCCGTGGGTGTCCCGGTCCCCAGAGAACAGTGGGAGT
CACTTCTGTTACCTCACTGACAACCACACCTCTGTGGTGGGAATGAGGACGGTGGCTGCCACCA
TGAATGTCACATCTACCCCAGTCAAGCCCGAGGACATGTGGTCGGCCGAGGGGAAGGGTGCTGG
AGCCTGTGACCCCGACTGTCAGCTTCCACACCTCTTCTGTTACCCAGCTCAGAGTAACTTTTCA
GGCACCAGATACCCACTGTCATGGATAGATGAGGTCAAGTCTGGGCAGAGGAGTCCTGTGAGAG
CGCCTGGGAAGTGGTTTGTGCTGCTTGATGCGGCCTCCTATGTCAGCACTTCCCCCTTGGATCT
GTCAGCTCACCAGGCTGACTTCATCCCCATCTCCTTCTATAAGATCTTTGGGCTTCCCACAGGC
CTGGGTGCTCTGCTAGTCAATAAGCGCGTGGCTCCTCTGCTGAGGAAAGGCTACTTCGGAGGAG
GGACTGCAGCCGTCTACCTTGCCGGGGAAGACTTTTACATCCCAAGGTCATCGGTGGCAGAAAG
GTTCGAAGACGGCACCATCTCATTCCTTGATGTAATAGCGTTGAAGCATGGATTTGATGTGCTG
GAGCGCCTCACAGGTGGCATGGTGAACATACAACAGCACACCTTTGCTCTGCTGCACTTTACCC
ACTCTGCCCTGTCCTCCCTCCGCTATCCCAACGGGGCCCCAGTGGTGCGCATTTACGGTGACTC
TGGGTTCAGCAGCCCTGACGTCCAGGGTCCAATCATCAATTTTAATGTACTGGATGATGCTGGG
AAGATCATCGGCTACTCCCAGGTGGACAAAATGGCAAGCCTGTACAACATCCACCTGAGGACTG
GCTGCTTCTGTAACTTGGGGGCCTGCCAGAGGCACCTGGGGCTAAGTGAAGAGATGGTTAAGAA
ACATTTTCAGGCTGGTCATGTCTGTGGAGATGATGTTGACATTATAGACGGACGACCCACCGGC
TCTGTGAGGATTTCCTTTGGATACATGTCCACACTAGAAGATGCCCAGGCCTTTCTCAGGTTTA
TCAGCACTATCTACCTTCGCTCACCCGGTGGCCAGCCTGTTCCTCAAGCCAGCACCAGTGACAC
TGGAGTCTTATCCTCAAAGAGTGACTGTCAGTCACCTCAGGAAGGTCCCTGCGCAGACCCTGCA
GTTTCCAGTGGCTCCTATCCTGACATCAATACCGTGGACTTGGACCTGTCTCAGAGCAAAGCCA
GTAGCATCCAGCCGATCCCTCAAGAGAAAGTTGCAGGTATCCTGAATGGGGACCTTGGGTCCCA
CATTGTCACCAACATTTACCTCTACCCCATCAAATCCTGTGCTGCGTTTGAGGTGACTAAGTGG
CCCGTGGGGAGCCAAGGGCTGCTGTATGACCGGAGCTGGATGGTTGTGAATCACAACGGCGTTT
GCCTGAGTCAGAAGCAGGAGCCACGGCTCTGCCTGATCCAGCCCTGCATCGACCTGCAGCAGAA
GGTCATGGTCATCAAAGCAGAAGGGATGGAGCCGATACAGGTGCCTCTTGAGGAAGACGGTGAA
CGGACCCAGATTTGCCAAAGCAGAGTGTGTGCAGACAGGGTAAATACTTACGATTGTGGAGAAA
ATGTTTCAAGATGGCTGTCCAAGTTTTGTGGCCGTCCATGCCATTTAATCAAGCAAAGTCCACA
CTTCCAGCGAAATGCAAAGAAGACGCCTAAACAAGGTTCTGGGGCCTTGTCACAGGTGCCAGAT
GATTTGTATCGACCAGAAAACTGGCCAGCGGAACCAGGATGTCTTCCAGAAGCTTTCTGAGAGC
CGGGGGAGAAAGGTGAACTTTGGCGTGTACCTGATGCACTCGTCCTTGGATTTATCGTCTCCGT
GTTTCCTGTCAGTGGGATCTGAGGTACTCCCTGTGT

hide sequence

RefSeq Acc Id:

XM_063277463 ⟹ XP_063133533

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	18	16,206,724 - 16,248,666 (+)	NCBI

RefSeq Acc Id:

XM_063277464 ⟹ XP_063133534

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	18	16,206,722 - 16,248,666 (+)	NCBI

RefSeq Acc Id:

XR_001842027

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	18	16,206,727 - 16,251,786 (+)	NCBI
mRatBN7.2	18	15,931,659 - 15,977,415 (+)	NCBI
Rnor_6.0	18	16,590,108 - 16,635,984 (+)	NCBI

Sequence:

show sequence

GTGCAGGAGGTCACACCAGAGCGTCCGGCTCTGAAGTTGCATAATCGCTAGGAGTTTATCAAGC
AGCTCAATGGTTTCCTTTGAACCGCGGGGAGTGCAGTCGACCACAGCAGTCCAAGTGGACTTGC
TGGTCTGGAGCGCAGGGGGCAAGGATCCCAGGTTCTGGGCCAGTAGGACTCGGAGTCACATATG
CCCAGGGGAAAAGACACGCACTCCGTTGTTCCTGCCACCTGCCTTACTGGCACCTAGACATCCC
AGGACTCGCACCCAGGTGTCTAGAGTGTCTCTTGGTCAGCGTTAGGCTGTGGCGGTCACCGCAG
AGTGCGCGACCGAGTTCTGTCCCAGGTGGGCAAAGGCCGCACCGAAGTGAAAGCTTTCAGTGAG
TCTGCGAGCTGCAAGGAGGCCGGCCCGCGAGGCACCGCCCATGGGTGGGGACCCGAGTCACCCA
GGGCTCAGCACTGGCGAAATCGCCTCCCTTGCTCACTTCCCGGGCTGGGCGGTCTAGATCCCGT
AGACTTCAGACGCGATCCATGGCCTGCGGGGCGACAGAGCGGGGCCCTGAGCCCCCGGCCTTCC
AGCGCCATCCAGAAGCCAGCGCACCGCGCCTGGCCCACGGCTACGGGTTGCGCAGCATGAGCGA
GCTGCGGGACCAGGAGTTTGGCCGCCTAGCAGGAACTGTCTATCTTGACCATGCAGGAGCCACC
TTGTTCCCCCAGAGCCAGCTCACAAACTTCACTAAGGATCTCATGGAAAATGTCTATGGTAATC
CTCACAGCCAGAACATCACCAGCAAACTCACCCATGACACGGTGGAGCAGGTCCGATACAGGGT
CCTGACTCACTTTCACACCACCCCAGAGGACTACAGCGTGATCTTCACAGCCGGGAGCACGGCT
GCTCTCAGGCTGGTGGCAGAGACCTTTCCGTGGGTGTCCCGGTCCCCAGAGAACAGTGGGAGTC
ACTTCTGTTACCTCACTGACAACCACACCTCTGTGGTGGGAATGAGGACGGTGGCTGCCACCAT
GAATGTCACATCTACCCCAGTCAAGCCCGAGGACATGTGGTCGGCCGAGGGGAAGGGTGCTGGA
GCCTGTGACCCCGACTGTCAGCTTCCACACCTCTTCTGTTACCCAGCTCAGAGTAACTTTTCAG
GCACCAGATACCCACTGTCATGGATAGATGAGGTCAAGTCTGGGCAGAGGAGTCCTGTGAGAGC
GCCTGGGAAGTGGTTTGTGCTGCTTGATGCGGCCTCCTATGTCAGCACTTCCCCCTTGGATCTG
TCAGCTCACCAGGCTGACTTCATCCCCATCTCCTTCTATAAGATCTTTGGGCTTCCCACAGGCC
TGGGTGCTCTGCTAGTCAATAAGCGCGTGGCTCCTCTGCTGAGGAAAGGCTACTTCGGAGGAGG
GACTGCAGCCGTCTACCTTGCCGGGGAAGACTTTTACATCCCAAGGTCATCGGTGGCAGAAAGG
TTCGAAGACGGCACCATCTCATTCCTTGATGTAATAGCGTTGAAGCATGGATTTGATGTGCTGG
AGCGCCTCACAGGTGGCATGGTGAACATACAACAGCACACCTTTGCTCTGCTGCACTTTACCCA
CTCTGCCCTGTCCTCCCTCCGCTATCCCAACGGGGCCCCAGTGGTGCGCATTTACGGTGACTCT
GGGTTCAGCAGCCCTGACGTCCAGGGTCCAATCATCAATTTTAATGTACTGGATGATGCTGGGA
AGATCATCGGCTACTCCCAGGTGGACAAAATGGCAAGCCTGTACAACATCCACCTGAGGACTGG
CTGCTTCTGTAACTTGGGGGCCTGCCAGAGGCACCTGGGGCTAAGTGAAGAGATGGTTAAGAAA
CATTTTCAGGCTGGTCATGTCTGTGGAGATGATGTTGACATTATAGACGGACGACCCACCGGCT
CTGTGAGGATTTCCTTTGGATACATGTCCACACTAGAAGATGCCCAGGCCTTTCTCAGGTTTAT
CAGCACTATCTACCTTCGCTCACCCGGTGGCCAGCCTGTTCCTCAAGCCAGCACCAGTGACACT
GGAGTCTTATCCTCAAAGAGTGACTGTCAGTCACCTCAGGAAGGTCCCTGCGCAGACCCTGCAG
TTTCCAGTGGCTCCTATCCTGACATCAATACCGTGGACTTGGACCTGTCTCAGAGCAAAGCCAG
TAGCATCCAGCCGATCCCTCAAGAGAAAGTTGCAGGTATCCTGAATGGGGACCTTGGGTCCCAC
ATTGTCACCAACATTTACCTCTACCCCATCAAATCCTGTGCTGCGTTTGAGGTGACTAAGTGGC
CCGTGGGGAGCCAAGGGCTGCTGTATGACCGGAGCTGGATGGTTGTGAATCACAACGGCGTTTG
CCTGAGTCAGAAGCAGGAGCCACGGCTCTGCCTGATCCAGCCCTGCATCGACCTGCAGCAGAAG
GTCATGGTCATCAAAGCAGAAGGGATGGAGCCGATACAGGTGCCTCTTGAGGAAGACGGTGAAC
GGACCCAGATTTGCCAAAGCAGAGTGTGTGCAGACAGGGTAAATACTTACGATTGTGGAGAAAA
TGTTTCAAGATGGCTGTCCAAGTTTTGTGGCCGTCCATGCCATTTAATCAAGCAAAGTCCACAC
TTCCAGCGAAATGCAAAGAAGACGCCTAAACAAGGTCATCCTCCCGGCACTGCTGTTGCCCTGT
CCCTGGTGAATGAGGCTCAGTATCTGTTGGTGAACACATCAAGTGTTCTGGAGCTTCAGCAGCA
GCTAAACGCCAGGTTCTGGGGCCTTGTCACAGGTGCCAGATGATTTGTATCGACCAGAAAACTG
GCCAGCGGAACCAGGATGTCTTCCAGAAGCTTTCTGAGAGCCGGGGGAGAAAGGTGAACTTTGG
CGTGTACCTGATGCACTCGTCCTTGGATTTATCGTCTCCGTGTTTCCTGTCAGTGGGATCTGAG
GTACTCCCTGTGT

hide sequence

Protein Sequences


Protein RefSeqs	NP_001382600	(Get FASTA)	NCBI Sequence Viewer
	XP_017456477	(Get FASTA)	NCBI Sequence Viewer
	XP_063133533	(Get FASTA)	NCBI Sequence Viewer
	XP_063133534	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDL76141	(Get FASTA)	NCBI Sequence Viewer
	EDL76142	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000061024.3
	ENSRNOP00000076171
	ENSRNOP00000076171.1
	ENSRNOP00000100317
	ENSRNOP00000100317.1
	ENSRNOP00000102927.1
	ENSRNOP00000108340.1

RefSeq Acc Id:

XP_017456477 ⟸ XM_017600988

- Peptide Label:

isoform X3

- Sequence:

show sequence

MACGATERGPEPPAFQRHPEASAPRLAHGYGLRSMSELRDQEFGRLAGTVYLDHAGATLFPQSQ
LTNFTKDLMENVYGNPHSQNITSKLTHDTVEQVRYRVLTHFHTTPEDYSVIFTAGSTAALRLVA
ETFPWVSRSPENSGSHFCYLTDNHTSVVGMRTVAATMNVTSTPVKPEDMWSAEGKGAGACDPDC
QLPHLFCYPAQSNFSGTRYPLSWIDEVKSGQRSPVRAPGKWFVLLDAASYVSTSPLDLSAHQAD
FIPISFYKIFGLPTGLGALLVNKRVAPLLRKGYFGGGTAAVYLAGEDFYIPRSSVAERFEDGTI
SFLDVIALKHGFDVLERLTGGMVNIQQHTFALLHFTHSALSSLRYPNGAPVVRIYGDSGFSSPD
VQGPIINFNVLDDAGKIIGYSQVDKMASLYNIHLRTGCFCNLGACQRHLGLSEEMVKKHFQAGH
VCGDDVDIIDGRPTGSVRISFGYMSTLEDAQAFLRFISTIYLRSPGGQPVPQASTSDTGVLSSK
SDCQSPQEGPCADPAVSSGSYPDINTVDLDLSQSKASSIQPIPQEKVAGILNGDLGSHIVTNIY
LYPIKSCAAFEVTKWPVGSQGLLYDRSWMVVNHNGVCLSQKQEPRLCLIQPCIDLQQKVMVIKA
EGMEPIQVPLEEDGERTQICQSRVCADRVNTYDCGENVSRWLSKFCGRPCHLIKQSPHFQRNAK
KTPKQGSGALSQVPDDLYRPENWPAEPGCLPEAF

hide sequence

Ensembl Acc Id:

ENSRNOP00000076171 ⟸ ENSRNOT00000093715

Ensembl Acc Id:

ENSRNOP00000076169 ⟸ ENSRNOT00000093641

Ensembl Acc Id:

ENSRNOP00000076247 ⟸ ENSRNOT00000093441

Ensembl Acc Id:

ENSRNOP00000061024 ⟸ ENSRNOT00000066583

RefSeq Acc Id:	NP_001382600 ⟸ NM_001395671
- UniProtKB:	A0A1W2Q693 (UniProtKB/TrEMBL), A6J2K9 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063133534 ⟸ XM_063277464
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_063133533 ⟸ XM_063277463
- Peptide Label:	isoform X1

Ensembl Acc Id:

ENSRNOP00000102927 ⟸ ENSRNOT00000122065

Ensembl Acc Id:

ENSRNOP00000100317 ⟸ ENSRNOT00000129170

Ensembl Acc Id:

ENSRNOP00000108340 ⟸ ENSRNOT00000148176

Protein Domains

MOSC

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-A0A1W2Q693-F1-model_v2	AlphaFold	A0A1W2Q693	1-862	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13700672

Promoter ID:

EPDNEW_R11191

Type:

initiation region

Name:

Mocos_1

Description:

molybdenum cofactor sulfurase

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	18	16,590,590 - 16,590,650	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1308496	AgrOrtholog
BioCyc Gene	G2FUF-8144	BioCyc
BioCyc Pathway	PWY-5963 [molybdenum cofactor sulfulylation (eukaryotes)]	BioCyc
BioCyc Pathway Image	PWY-5963	BioCyc
Ensembl Genes	ENSRNOG00000015113	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000066583.3	UniProtKB/TrEMBL
	ENSRNOT00000093715	ENTREZGENE
	ENSRNOT00000093715.3	UniProtKB/TrEMBL
	ENSRNOT00000122065.1	UniProtKB/TrEMBL
	ENSRNOT00000129170	ENTREZGENE
	ENSRNOT00000129170.1	UniProtKB/TrEMBL
	ENSRNOT00000148176.1	UniProtKB/TrEMBL
Gene3D-CATH	3.40.640.10	UniProtKB/TrEMBL
	Aspartate Aminotransferase, domain 1	UniProtKB/TrEMBL
InterPro	Aminotrans_V/Cys_dSase	UniProtKB/TrEMBL
	MoCF_Sase_C	UniProtKB/TrEMBL
	MoCo_sulfurase	UniProtKB/TrEMBL
	MOSC_N	UniProtKB/TrEMBL
	PyrdxlP-dep_Trfase_major_dom	UniProtKB/TrEMBL
	PyrdxlP-dep_Trfase_major_sub1	UniProtKB/TrEMBL
	PyrdxlP-dep_Trfase_small	UniProtKB/TrEMBL
	Pyrv_Knase_b-brl-like	UniProtKB/TrEMBL
NCBI Gene	361300	ENTREZGENE
PANTHER	MOLYBDENUM COFACTOR SULFURASE	UniProtKB/TrEMBL
	MOLYBDOPTERIN COFACTOR SULFURASE MOSC	UniProtKB/TrEMBL
	MOSC DOMAIN-CONTAINING PROTEIN	UniProtKB/TrEMBL
Pfam	Aminotran_5	UniProtKB/TrEMBL
	MOSC	UniProtKB/TrEMBL
	MOSC_N	UniProtKB/TrEMBL
PhenoGen	Mocos	PhenoGen
PROSITE	MOSC	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000015113	RatGTEx
Superfamily-SCOP	MOSC N-terminal domain-like	UniProtKB/TrEMBL
	PK_B_barrel_like	UniProtKB/TrEMBL
	PyrdxlP-dep_Trfase_major	UniProtKB/TrEMBL
UniProt	A0A1W2Q693	ENTREZGENE, UniProtKB/TrEMBL
	A0ABK0L8U6_RAT	UniProtKB/TrEMBL
	A0ABK0LNA4_RAT	UniProtKB/TrEMBL
	A0ABK0LXL0_RAT	UniProtKB/TrEMBL
	A6J2K9	ENTREZGENE, UniProtKB/TrEMBL
	D4A1G3_RAT	UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2008-04-30	Mocos	molybdenum cofactor sulfurase	Mocos_predicted	molybdenum cofactor sulfurase (predicted)	'predicted' is removed	2292626	APPROVED
2005-01-12	Mocos_predicted	molybdenum cofactor sulfurase (predicted)			Symbol and Name status set to approved	70820	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - MGI

Imported Disease Annotations - OMIM

BioCyc Pathways

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - MGI

Imported Disease Annotations - OMIM

BioCyc Pathways