Adck1 (aarF domain containing kinase 1) - Rat Genome Database

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Gene: Adck1 (aarF domain containing kinase 1) Rattus norvegicus
Analyze
Symbol: Adck1
Name: aarF domain containing kinase 1
RGD ID: 1308263
Description: Predicted to enable ATP binding activity and protein kinase activity. Predicted to be involved in lipid homeostasis; mitochondrion organization; and regulation of mitochondrion organization. Predicted to be located in mitochondrion. Predicted to be active in mitochondrial inner membrane. Orthologous to human ADCK1 (aarF domain containing kinase 1); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene; amphetamine.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: aarF domain-containing protein kinase 1; LOC366698; uncharacterized aarF domain-containing protein kinase 1
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr86113,005,333 - 113,107,960 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl6113,008,111 - 113,132,359 (+)EnsemblGRCr8
mRatBN7.26107,277,170 - 107,377,057 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl6107,277,244 - 107,377,055 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx6107,447,792 - 107,547,603 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.06107,746,614 - 107,846,436 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.06107,116,306 - 107,216,119 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.06111,640,652 - 111,741,418 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl6111,642,411 - 111,740,481 (+)Ensemblrn6Rnor6.0
Rnor_5.06120,923,362 - 121,020,830 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.46111,872,315 - 111,992,613 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera6105,091,084 - 105,190,719 (+)NCBICelera
RGSC_v3.16111,883,788 - 111,995,600 (+)NCBI
Cytogenetic Map6q31NCBI
JBrowse:




Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
3. GOA pipeline RGD automated data pipeline
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:18614015   PMID:31125351  


Genomics

Comparative Map Data
Adck1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr86113,005,333 - 113,107,960 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl6113,008,111 - 113,132,359 (+)EnsemblGRCr8
mRatBN7.26107,277,170 - 107,377,057 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl6107,277,244 - 107,377,055 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx6107,447,792 - 107,547,603 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.06107,746,614 - 107,846,436 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.06107,116,306 - 107,216,119 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.06111,640,652 - 111,741,418 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl6111,642,411 - 111,740,481 (+)Ensemblrn6Rnor6.0
Rnor_5.06120,923,362 - 121,020,830 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.46111,872,315 - 111,992,613 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera6105,091,084 - 105,190,719 (+)NCBICelera
RGSC_v3.16111,883,788 - 111,995,600 (+)NCBI
Cytogenetic Map6q31NCBI
ADCK1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381477,800,109 - 77,935,014 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1477,800,064 - 77,935,014 (+)Ensemblhg38GRCh38
GRCh371478,266,452 - 78,401,357 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361477,336,227 - 77,470,047 (+)NCBIBuild 36Build 36hg18NCBI36
Build 341477,336,226 - 77,470,047NCBI
Celera1458,304,590 - 58,438,453 (+)NCBICelera
Cytogenetic Map14q24.3NCBI
HuRef1458,432,570 - 58,566,242 (+)NCBIHuRef
CHM1_11478,205,866 - 78,339,895 (+)NCBICHM1_1
T2T-CHM13v2.01472,009,104 - 72,144,049 (+)NCBIT2T-CHM13v2.0
Adck1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391288,327,264 - 88,428,496 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1288,327,324 - 88,428,494 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm381288,360,494 - 88,461,726 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1288,360,554 - 88,461,724 (+)Ensemblmm10GRCm38
MGSCv371289,599,245 - 89,700,162 (+)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv361288,874,056 - 88,975,197 (+)NCBIMGSCv36mm8
Celera1289,684,194 - 89,789,768 (+)NCBICelera
Cytogenetic Map12D2- D3NCBI
cM Map1242.55NCBI
Adck1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554381,638,668 - 1,751,962 (+)Ensembl
ChiLan1.0NW_0049554381,638,673 - 1,760,791 (+)NCBIChiLan1.0ChiLan1.0
ADCK1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21578,887,369 - 79,027,201 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11478,103,891 - 78,243,706 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01458,355,670 - 58,495,032 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11477,556,389 - 77,695,344 (+)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1477,556,389 - 77,695,344 (+)EnsemblpanPan2panpan1.1
ADCK1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1850,512,342 - 50,666,410 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl850,512,261 - 50,656,958 (+)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha850,199,173 - 50,346,730 (+)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.0850,746,049 - 50,892,474 (+)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl850,780,215 - 50,927,625 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1850,408,135 - 50,573,880 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0850,431,378 - 50,578,902 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0850,830,024 - 50,977,731 (+)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Adck1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440864025,369,304 - 25,472,845 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364886,592,405 - 6,698,140 (+)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049364886,579,461 - 6,699,664 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ADCK1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl7100,777,144 - 100,902,948 (+)EnsemblsusScr11Sscrofa11.1
Sscrofa11.17100,777,125 - 100,909,140 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.27106,832,993 - 106,903,089 (+)NCBISscrofa10.2Sscrofa10.2susScr3
ADCK1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12455,063,870 - 55,193,475 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2455,080,088 - 55,193,471 (+)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_02366605343,247,543 - 43,375,449 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Adck1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473423,976,811 - 24,116,546 (-)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_00462473423,994,929 - 24,116,551 (-)NCBIHetGla 1.0HetGla 1.0hetGla2
Adck1
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v17101,704,784 - 101,804,396 (-)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Adck1
746 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:373
Count of miRNA genes:215
Interacting mature miRNAs:257
Transcripts:ENSRNOT00000016962
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
4145119Mcs25Mammary carcinoma susceptibility QTL 250.0001mammary gland integrity trait (VT:0010552)ratio of deaths to total study population during a period of time (CMO:0001023)671278722116278722Rat
4145118Mcs26Mammary carcinoma susceptibility QTL 260.0001mammary gland integrity trait (VT:0010552)post-insult time to mammary tumor formation (CMO:0000345)6112483610147156653Rat
2293088Iddm28Insulin dependent diabetes mellitus QTL 285.21blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)668767270135411972Rat
1331799Bp211Blood pressure QTL 2113.66407arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)688019181136741135Rat
1581563Uae33Urinary albumin excretion QTL 33urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)693560258136550638Rat
10054138Gmadr3Adrenal mass QTL 33.680.00045adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)690871046135871046Rat
1641917Colcr5Colorectal carcinoma resistance QTL 53.180.0009intestine integrity trait (VT:0010554)benign colorectal tumor number (CMO:0001795)698944780143944780Rat
71111Iddm8Insulin dependent diabetes mellitus QTL 81.90.002blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)6110921244147156653Rat
61414Pia3Pristane induced arthritis QTL 34.5joint integrity trait (VT:0010548)post-insult time to onset of experimental arthritis (CMO:0001450)6100704576136029228Rat
724524Uae2Urinary albumin excretion QTL 22.70.0005urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)679198463144254945Rat
1358355Srcrt4Stress Responsive Cort QTL 46.39blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)6106095977147156653Rat
737827Hcar11Hepatocarcinoma resistance QTL 114.4liver integrity trait (VT:0010547)liver tumorous lesion number (CMO:0001068)646050607116278722Rat
2303624Vencon5Ventilatory control QTL 54.45respiration trait (VT:0001943)minute ventilation (CMO:0000132)693778632138778632Rat
1576309Emca7Estrogen-induced mammary cancer QTL 74mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)620859430113082285Rat
61329Eae9Experimental allergic encephalomyelitis QTL 93.7body mass (VT:0001259)change in body weight (CMO:0002045)684490437129490437Rat
10054123Srcrt6Stress Responsive Cort QTL 62.50.0043blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)690871046135871046Rat
724536Uae7Urinary albumin excretion QTL 73.5urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)693560258136550638Rat
2313399Anxrr28Anxiety related response QTL 28aggression-related behavior trait (VT:0015014)tameness/aggressiveness composite score (CMO:0002136)6101593607138161926Rat
1576302Schws4Schwannoma susceptibility QTL 40.0078nervous system integrity trait (VT:0010566)percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017)678204640123204640Rat
1581550Pur8Proteinuria QTL 8urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)693560258136550638Rat
1300075Glom7Glomerulus QTL 75.60.0000002kidney glomerulus morphology trait (VT:0005325)count of superficial glomeruli not directly contacting the kidney surface (CMO:0001002)676937178121937178Rat
1331725Bp212Blood pressure QTL 2123.52475arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)699437079125323237Rat
12801471Schws9Schwannoma susceptibility QTL 9nervous system integrity trait (VT:0010566)percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017)6101593607146593607Rat

Markers in Region
D6Rat57  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.26107,366,652 - 107,366,874 (+)MAPPERmRatBN7.2
Rnor_6.06111,730,516 - 111,730,737NCBIRnor6.0
Rnor_5.06121,009,928 - 121,010,149UniSTSRnor5.0
RGSC_v3.46111,983,107 - 111,983,328RGDRGSC3.4
RGSC_v3.46111,983,108 - 111,983,329UniSTSRGSC3.4
Celera6105,181,252 - 105,181,473UniSTS
RGSC_v3.16111,986,638 - 111,986,859RGD
RH 3.4 Map6744.5RGD
RH 3.4 Map6744.5UniSTS
RH 2.0 Map6992.3RGD
FHH x ACI Map669.11RGD
Cytogenetic Map6q31UniSTS
D6Rat81  
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr86113,082,045 - 113,082,285 (+)Marker Load Pipeline
mRatBN7.26107,351,142 - 107,351,382 (+)MAPPERmRatBN7.2
Rnor_6.06111,715,478 - 111,715,717NCBIRnor6.0
Rnor_5.06120,994,890 - 120,995,129UniSTSRnor5.0
RGSC_v3.46111,967,597 - 111,967,837RGDRGSC3.4
RGSC_v3.46111,967,598 - 111,967,837UniSTSRGSC3.4
Celera6105,165,742 - 105,165,981UniSTS
RGSC_v3.16111,971,129 - 111,971,368RGD
RH 3.4 Map6744.5RGD
RH 3.4 Map6744.5UniSTS
RH 2.0 Map6991.2RGD
SHRSP x BN Map665.7398RGD
FHH x ACI Map669.11RGD
Cytogenetic Map6q31UniSTS
D6Rat162  
Rat AssemblyChrPosition (strand)SourceJBrowse
Rnor_5.06120,961,921 - 120,962,177NCBIRnor5.0
RGSC_v3.46111,934,250 - 111,934,579RGDRGSC3.4
RGSC_v3.46111,934,251 - 111,934,579UniSTSRGSC3.4
Celera6105,132,401 - 105,132,729UniSTS
RGSC_v3.16111,937,779 - 111,938,210RGD
SHRSP x BN Map665.7398RGD
SHRSP x BN Map665.7398UniSTS
Cytogenetic Map6q31UniSTS
AI169386  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.26107,375,870 - 107,376,028 (+)MAPPERmRatBN7.2
Rnor_6.06111,740,232 - 111,740,389NCBIRnor6.0
Rnor_5.06121,019,644 - 121,019,801UniSTSRnor5.0
RGSC_v3.46111,992,364 - 111,992,521UniSTSRGSC3.4
Celera6105,190,470 - 105,190,627UniSTS
RH 3.4 Map6755.6UniSTS
Cytogenetic Map6q31UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 67 161 91 90 59 92 59 6 356 192 11 140 81 92 31 17 17

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001108985 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001399747 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001399748 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001399749 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001399750 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017594260 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017594261 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039112651 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039112653 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039112655 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039112657 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039112658 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063262230 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063262231 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide CH473982 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ212472 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAXUCZ010000006 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSRNOT00000016962   ⟹   ENSRNOP00000016962
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl6113,008,386 - 113,107,960 (+)Ensembl
mRatBN7.2 Ensembl6107,277,458 - 107,376,120 (+)Ensembl
Rnor_6.0 Ensembl6111,642,411 - 111,740,481 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000104832   ⟹   ENSRNOP00000078150
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl6113,008,134 - 113,107,960 (+)Ensembl
mRatBN7.2 Ensembl6107,277,244 - 107,377,055 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000123246   ⟹   ENSRNOP00000102605
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl6113,008,134 - 113,107,960 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000129047   ⟹   ENSRNOP00000107090
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl6113,008,417 - 113,107,960 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000134547   ⟹   ENSRNOP00000105674
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl6113,018,504 - 113,107,960 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000150020   ⟹   ENSRNOP00000104535
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl6113,008,111 - 113,132,359 (+)Ensembl
RefSeq Acc Id: NM_001108985   ⟹   NP_001102455
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr86113,008,386 - 113,107,960 (+)NCBI
mRatBN7.26107,277,474 - 107,377,057 (+)NCBI
Rnor_6.06111,642,411 - 111,740,481 (+)NCBI
Rnor_5.06120,923,362 - 121,020,830 (+)NCBI
RGSC_v3.46111,872,315 - 111,992,613 (+)RGD
Celera6105,091,084 - 105,190,719 (+)RGD
Sequence:
RefSeq Acc Id: NM_001399747   ⟹   NP_001386676
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr86113,008,134 - 113,107,960 (+)NCBI
mRatBN7.26107,277,222 - 107,377,057 (+)NCBI
RefSeq Acc Id: NM_001399748   ⟹   NP_001386677
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr86113,008,111 - 113,107,960 (+)NCBI
mRatBN7.26107,277,199 - 107,377,057 (+)NCBI
RefSeq Acc Id: NM_001399749   ⟹   NP_001386678
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr86113,008,111 - 113,107,960 (+)NCBI
mRatBN7.26107,277,199 - 107,377,057 (+)NCBI
RefSeq Acc Id: NM_001399750   ⟹   NP_001386679
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr86113,008,111 - 113,107,960 (+)NCBI
mRatBN7.26107,277,199 - 107,377,057 (+)NCBI
RefSeq Acc Id: XM_039112651   ⟹   XP_038968579
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr86113,008,346 - 113,107,960 (+)NCBI
mRatBN7.26107,277,456 - 107,377,057 (+)NCBI
RefSeq Acc Id: XM_039112653   ⟹   XP_038968581
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr86113,045,113 - 113,107,960 (+)NCBI
mRatBN7.26107,314,136 - 107,377,057 (+)NCBI
RefSeq Acc Id: XM_039112655   ⟹   XP_038968583
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr86113,019,825 - 113,107,960 (+)NCBI
mRatBN7.26107,293,292 - 107,377,057 (+)NCBI
RefSeq Acc Id: XM_039112657   ⟹   XP_038968585
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr86113,008,383 - 113,107,960 (+)NCBI
mRatBN7.26107,277,463 - 107,377,057 (+)NCBI
RefSeq Acc Id: XM_039112658   ⟹   XP_038968586
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr86113,005,333 - 113,107,960 (+)NCBI
mRatBN7.26107,277,259 - 107,377,057 (+)NCBI
RefSeq Acc Id: XM_063262230   ⟹   XP_063118300
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr86113,019,825 - 113,107,960 (+)NCBI
RefSeq Acc Id: XM_063262231   ⟹   XP_063118301
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr86113,050,626 - 113,107,960 (+)NCBI
RefSeq Acc Id: NP_001102455   ⟸   NM_001108985
- Peptide Label: isoform 2
- UniProtKB: D3ZRJ0 (UniProtKB/TrEMBL),   A6JEB5 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000016962   ⟸   ENSRNOT00000016962
RefSeq Acc Id: XP_038968586   ⟸   XM_039112658
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038968579   ⟸   XM_039112651
- Peptide Label: isoform X1
- UniProtKB: A0A8I5Y874 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038968585   ⟸   XM_039112657
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038968583   ⟸   XM_039112655
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038968581   ⟸   XM_039112653
- Peptide Label: isoform X2
Ensembl Acc Id: ENSRNOP00000078150   ⟸   ENSRNOT00000104832
RefSeq Acc Id: NP_001386677   ⟸   NM_001399748
- Peptide Label: isoform 1
- UniProtKB: A0A8I5Y874 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001386678   ⟸   NM_001399749
- Peptide Label: isoform 3
RefSeq Acc Id: NP_001386679   ⟸   NM_001399750
- Peptide Label: isoform 3
RefSeq Acc Id: NP_001386676   ⟸   NM_001399747
- Peptide Label: isoform 1
- UniProtKB: A0A8I5Y874 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063118300   ⟸   XM_063262230
- Peptide Label: isoform X3
RefSeq Acc Id: XP_063118301   ⟸   XM_063262231
- Peptide Label: isoform X4
Ensembl Acc Id: ENSRNOP00000102605   ⟸   ENSRNOT00000123246
Ensembl Acc Id: ENSRNOP00000107090   ⟸   ENSRNOT00000129047
Ensembl Acc Id: ENSRNOP00000105674   ⟸   ENSRNOT00000134547
Ensembl Acc Id: ENSRNOP00000104535   ⟸   ENSRNOT00000150020
Protein Domains
Protein kinase

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-D3ZRJ0-F1-model_v2 AlphaFold D3ZRJ0 1-455 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13694763
Promoter ID:EPDNEW_R5287
Type:single initiation site
Name:Adck1_1
Description:aarF domain containing kinase 1
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.06111,642,455 - 111,642,515EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1308263 AgrOrtholog
BioCyc Gene G2FUF-36688 BioCyc
Ensembl Genes ENSRNOG00000012685 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000016962 ENTREZGENE
  ENSRNOT00000016962.7 UniProtKB/TrEMBL
  ENSRNOT00000104832 ENTREZGENE
  ENSRNOT00000104832.2 UniProtKB/TrEMBL
  ENSRNOT00000123246.1 UniProtKB/TrEMBL
  ENSRNOT00000129047 ENTREZGENE
  ENSRNOT00000129047.1 UniProtKB/TrEMBL
  ENSRNOT00000134547 ENTREZGENE
  ENSRNOT00000134547.1 UniProtKB/TrEMBL
  ENSRNOT00000150020.1 UniProtKB/TrEMBL
Gene3D-CATH Transferase(Phosphotransferase) domain 1 UniProtKB/TrEMBL
InterPro ABC_1 UniProtKB/TrEMBL
  ADCK1_dom UniProtKB/TrEMBL
  Kinase-like_dom UniProtKB/TrEMBL
  Mito_struct-func_regulator UniProtKB/TrEMBL
  Prot_kinase_cat_dom UniProtKB/TrEMBL
KEGG Report rno:366698 UniProtKB/TrEMBL
NCBI Gene 366698 ENTREZGENE
PANTHER AARF DOMAIN-CONTAINING PROTEIN KINASE 1 UniProtKB/TrEMBL
  ABC1 FAMILY PROTEIN UniProtKB/TrEMBL
Pfam ABC1 UniProtKB/TrEMBL
PhenoGen Adck1 PhenoGen
PROSITE PROTEIN_KINASE_DOM UniProtKB/TrEMBL
RatGTEx ENSRNOG00000012685 RatGTEx
Superfamily-SCOP Kinase_like UniProtKB/TrEMBL
UniProt A0A8I5Y874 ENTREZGENE, UniProtKB/TrEMBL
  A0ABK0LE76_RAT UniProtKB/TrEMBL
  A0ABK0LI59_RAT UniProtKB/TrEMBL
  A0ABK0LPH0_RAT UniProtKB/TrEMBL
  A0ABK0LYW5_RAT UniProtKB/TrEMBL
  A6JEB5 ENTREZGENE, UniProtKB/TrEMBL
  D3ZRJ0 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2008-04-30 Adck1  aarF domain containing kinase 1   Adck1_predicted  aarF domain containing kinase 1 (predicted)  'predicted' is removed 2292626 APPROVED
2005-01-12 Adck1_predicted  aarF domain containing kinase 1 (predicted)      Symbol and Name status set to approved 70820 APPROVED