Qpctl (Rattus norvegicus - Norway rat) |
| Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
GRCr8 | 1 | 87,916,771 - 87,925,843 (-) | NCBI | GRCr8 | GRCr8 | | GRCr8 | GRCr8 Ensembl | 1 | 87,916,772 - 87,925,843 (-) | Ensembl | | | | GRCr8 | mRatBN7.2 | 1 | 78,786,730 - 78,797,956 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 1 | 78,788,739 - 78,797,811 (-) | Ensembl | | | | mRatBN7.2 | UTH_Rnor_SHR_Utx | 1 | 84,177,764 - 84,186,843 (-) | NCBI | UTH_Rnor_SHR_Utx | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 1 | 92,735,416 - 92,744,486 (-) | NCBI | UTH_Rnor_SHRSP_BbbUtx_1.0 | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 1 | 85,932,866 - 85,941,945 (-) | NCBI | UTH_Rnor_WKY_Bbb_1.0 | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 1 | 80,046,975 - 80,057,022 (-) | NCBI | Rnor_6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 1 | 80,047,504 - 80,056,574 (-) | Ensembl | | | rn6 | Rnor6.0 | Rnor_5.0 | 1 | 81,314,398 - 81,323,907 (-) | NCBI | Rnor_5.0 | Rnor_5.0 | rn5 | | RGSC_v3.4 | 1 | 78,499,506 - 78,508,576 (-) | NCBI | RGSC_v3.4 | RGSC_v3.4 | rn4 | | Celera | 1 | 73,254,406 - 73,263,474 (-) | NCBI | | Celera | | | RGSC_v3.1 | 1 | 78,578,571 - 78,586,628 (-) | NCBI | | | | | Cytogenetic Map | 1 | q21 | NCBI | | | | |
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QPCTL (Homo sapiens - human) |
| Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
GRCh38 | 19 | 45,692,666 - 45,703,987 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 19 | 45,692,403 - 45,703,989 (+) | Ensembl | | | hg38 | GRCh38 | GRCh37 | 19 | 46,195,924 - 46,207,245 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 19 | 50,887,772 - 50,899,050 (+) | NCBI | Build 36 | Build 36 | hg18 | NCBI36 | Build 34 | 19 | 50,887,771 - 50,935,851 | NCBI | | | | | Celera | 19 | 43,001,866 - 43,013,375 (+) | NCBI | | Celera | | | Cytogenetic Map | 19 | q13.32 | NCBI | | | | | HuRef | 19 | 42,624,708 - 42,636,174 (+) | NCBI | | HuRef | | | CHM1_1 | 19 | 46,199,214 - 46,210,719 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 19 | 48,520,206 - 48,531,526 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Qpctl (Mus musculus - house mouse) |
| Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
GRCm39 | 7 | 18,874,142 - 18,883,121 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 7 | 18,873,627 - 18,883,216 (-) | Ensembl | | GRCm39 Ensembl | | GRCm39 | GRCm38 | 7 | 19,140,217 - 19,149,196 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 7 | 19,139,702 - 19,149,291 (-) | Ensembl | | | mm10 | GRCm38 | MGSCv37 | 7 | 19,725,566 - 19,734,545 (-) | NCBI | MGSCv37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 7 | 18,298,739 - 18,307,718 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 7 | 16,551,570 - 16,560,547 (-) | NCBI | | Celera | | | Cytogenetic Map | 7 | A3 | NCBI | | | | | cM Map | 7 | 9.46 | NCBI | | | | |
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Qpctl (Chinchilla lanigera - long-tailed chinchilla) |
| Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
ChiLan1.0 Ensembl | NW_004955574 | 165,031 - 173,766 (+) | Ensembl | | | | | ChiLan1.0 | NW_004955574 | 165,031 - 172,713 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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QPCTL (Pan paniscus - bonobo/pygmy chimpanzee) |
| Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
NHGRI_mPanPan1-v2 | 20 | 51,853,866 - 51,871,602 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 19 | 53,725,471 - 53,743,042 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 19 | 42,697,617 - 42,710,017 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 19 | 51,235,740 - 51,244,638 (+) | NCBI | PanPan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 19 | 51,236,054 - 51,245,144 (+) | Ensembl | | | panPan2 | panpan1.1 |
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QPCTL (Canis lupus familiaris - dog) |
| Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
CanFam3.1 | 1 | 109,881,281 - 109,891,095 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 1 | 109,883,356 - 109,891,056 (-) | Ensembl | | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 1 | 109,368,409 - 109,376,309 (-) | NCBI | Dog10K_Boxer_Tasha | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 1 | 110,416,518 - 110,424,423 (-) | NCBI | ROS_Cfam_1.0 | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 1 | 110,416,527 - 110,424,319 (-) | Ensembl | | | | ROS_Cfam_1.0 Ensembl | UMICH_Zoey_3.1 | 1 | 110,092,083 - 110,099,974 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 1 | 109,726,725 - 109,734,614 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 1 | 110,595,590 - 110,603,483 (-) | NCBI | UU_Cfam_GSD_1.0 | UU_Cfam_GSD_1.0 | | |
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Qpctl (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
| Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
HiC_Itri_2 | NW_024409349 | 17,721,509 - 17,732,052 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936706 | 2,069,421 - 2,077,317 (+) | Ensembl | | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936706 | 2,068,798 - 2,080,056 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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QPCTL (Sus scrofa - pig) |
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QPCTL (Chlorocebus sabaeus - green monkey) |
| Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
ChlSab1.1 | 6 | 39,134,860 - 39,144,466 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 6 | 39,135,294 - 39,144,361 (+) | Ensembl | | ChlSab1.1 Ensembl | chlSab2 | Vervet-AGM | Vero_WHO_p1.0 | NW_023666073 | 18,761,047 - 18,773,590 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Qpctl (Heterocephalus glaber - naked mole-rat) |
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Qpctl (Rattus rattus - black rat) |
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