Phyhipl (Rattus norvegicus - Norway rat) |
| Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
GRCr8 | 20 | 18,023,831 - 18,064,903 (+) | NCBI | GRCr8 | GRCr8 | | GRCr8 | GRCr8 Ensembl | 20 | 17,934,683 - 18,065,756 (+) | Ensembl | | | | GRCr8 | mRatBN7.2 | 20 | 18,024,744 - 18,065,822 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 20 | 18,024,666 - 18,065,478 (+) | Ensembl | | | | mRatBN7.2 | UTH_Rnor_SHR_Utx | 20 | 18,751,385 - 18,792,447 (+) | NCBI | UTH_Rnor_SHR_Utx | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 20 | 18,106,092 - 18,147,153 (+) | NCBI | UTH_Rnor_SHRSP_BbbUtx_1.0 | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 20 | 18,579,046 - 18,620,121 (+) | NCBI | UTH_Rnor_WKY_Bbb_1.0 | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 20 | 19,318,090 - 19,359,063 (+) | NCBI | Rnor_6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 20 | 19,318,250 - 19,358,719 (+) | Ensembl | | | rn6 | Rnor6.0 | Rnor_5.0 | 20 | 21,467,024 - 21,507,993 (+) | NCBI | Rnor_5.0 | Rnor_5.0 | rn5 | | RGSC_v3.4 | 20 | 18,815,710 - 18,849,381 (+) | NCBI | RGSC_v3.4 | RGSC_v3.4 | rn4 | | Celera | 20 | 19,424,021 - 19,457,478 (+) | NCBI | | Celera | | | RGSC_v3.1 | 20 | 18,829,509 - 18,863,178 (+) | NCBI | | | | | Cytogenetic Map | 20 | p11 | NCBI | | | | |
|
PHYHIPL (Homo sapiens - human) |
| Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
GRCh38 | 10 | 59,173,597 - 59,247,770 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 10 | 59,176,643 - 59,247,774 (+) | Ensembl | | | hg38 | GRCh38 | GRCh37 | 10 | 60,936,403 - 61,007,530 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 10 | 60,606,353 - 60,677,062 (+) | NCBI | Build 36 | Build 36 | hg18 | NCBI36 | Build 34 | 10 | 60,606,352 - 60,677,062 | NCBI | | | | | Celera | 10 | 54,202,113 - 54,273,651 (+) | NCBI | | Celera | | | Cytogenetic Map | 10 | q21.1 | NCBI | | | | | HuRef | 10 | 54,927,612 - 54,998,570 (+) | NCBI | | HuRef | | | CHM1_1 | 10 | 61,218,097 - 61,289,255 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 10 | 60,029,843 - 60,102,075 (+) | NCBI | | T2T-CHM13v2.0 | | |
|
Phyhipl (Mus musculus - house mouse) |
| Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
GRCm39 | 10 | 70,393,516 - 70,435,121 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 10 | 70,393,512 - 70,491,795 (-) | Ensembl | | GRCm39 Ensembl | | GRCm39 | GRCm38 | 10 | 70,557,686 - 70,599,291 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 10 | 70,557,682 - 70,655,965 (-) | Ensembl | | | mm10 | GRCm38 | MGSCv37 | 10 | 70,020,434 - 70,062,039 (-) | NCBI | MGSCv37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 10 | 69,952,986 - 69,994,577 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 10 | 71,648,067 - 71,689,644 (-) | NCBI | | Celera | | | Cytogenetic Map | 10 | B5.3 | NCBI | | | | | cM Map | 10 | 36.69 | NCBI | | | | |
|
Phyhipl (Chinchilla lanigera - long-tailed chinchilla) |
| Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
ChiLan1.0 Ensembl | NW_004955425 | 12,841,027 - 12,885,260 (+) | Ensembl | | | | | ChiLan1.0 | NW_004955425 | 12,841,027 - 12,885,260 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
|
PHYHIPL (Pan paniscus - bonobo/pygmy chimpanzee) |
| Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
NHGRI_mPanPan1-v2 | 8 | 71,387,887 - 71,459,032 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 10 | 71,393,210 - 71,464,354 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 10 | 55,710,893 - 55,782,817 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 10 | 57,928,697 - 58,000,665 (+) | NCBI | PanPan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 10 | 57,928,697 - 58,000,665 (+) | Ensembl | | | panPan2 | panpan1.1 |
|
PHYHIPL (Canis lupus familiaris - dog) |
| Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
CanFam3.1 | 4 | 11,387,346 - 11,461,014 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 4 | 11,387,295 - 11,460,638 (+) | Ensembl | | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 4 | 11,578,920 - 11,652,945 (+) | NCBI | Dog10K_Boxer_Tasha | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 4 | 11,649,749 - 11,723,857 (+) | NCBI | ROS_Cfam_1.0 | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 4 | 11,649,786 - 11,774,794 (+) | Ensembl | | | | ROS_Cfam_1.0 Ensembl | UMICH_Zoey_3.1 | 4 | 11,628,236 - 11,702,265 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 4 | 11,747,118 - 11,821,206 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 4 | 12,056,569 - 12,130,666 (+) | NCBI | UU_Cfam_GSD_1.0 | UU_Cfam_GSD_1.0 | | |
|
Phyhipl (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
| Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
HiC_Itri_2 | NW_024407213 | 69,759,819 - 69,816,970 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936614 | 3,843,845 - 3,902,997 (-) | Ensembl | | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936614 | 3,845,440 - 3,902,998 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
|
PHYHIPL (Sus scrofa - pig) |
| Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
Sscrofa11.1 Ensembl | 14 | 62,525,903 - 62,627,586 (+) | Ensembl | | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 14 | 62,525,915 - 62,630,383 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 14 | 67,475,936 - 67,496,632 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
|
PHYHIPL (Chlorocebus sabaeus - green monkey) |
| Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
ChlSab1.1 | 9 | 72,038,796 - 72,103,386 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 9 | 72,039,531 - 72,101,719 (-) | Ensembl | | ChlSab1.1 Ensembl | chlSab2 | Vervet-AGM | Vero_WHO_p1.0 | NW_023666048 | 32,923,857 - 32,990,490 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
|
Phyhipl (Heterocephalus glaber - naked mole-rat) |
|
Phyhipl (Rattus rattus - black rat) |
|