Dmc1 (DNA meiotic recombinase 1) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Behavioral & Substance Use Disorder Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)
Gene: Dmc1 (DNA meiotic recombinase 1) Rattus norvegicus
Analyze
Symbol: Dmc1
Name: DNA meiotic recombinase 1
RGD ID: 1307611
Description: Predicted to enable DNA binding activity; catalytic activity, acting on DNA; and identical protein binding activity. Predicted to be involved in DNA recombination and chromosome organization involved in meiotic cell cycle. Predicted to act upstream of or within germ cell development; meiosis I; and ovarian follicle development. Predicted to be located in chromosome, telomeric region and lateral element. Predicted to be active in condensed nuclear chromosome and site of double-strand break. Orthologous to human DMC1 (DNA meiotic recombinase 1); INTERACTS WITH bisphenol A; formaldehyde; trichloroethene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: disrupted meiotic cDNA 1 homolog; disrupted meiotic cDNA 1 homolog (yeast); DMC1 dosage suppressor of mck1 homolog; DMC1 dosage suppressor of mck1 homolog, meiosis-specific homologous recombination; DMC1 dosage suppressor of mck1 homolog, meiosis-specific homologous recombination (yeast); Dmc1h; LOC362960; meiotic recombination protein DMC1/LIM15 homolog
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr87113,005,278 - 113,047,854 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl7113,005,281 - 113,047,854 (-)EnsemblGRCr8
mRatBN7.27111,124,888 - 111,167,465 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl7111,124,888 - 111,167,952 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx7112,872,520 - 112,915,092 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.07115,096,054 - 115,138,630 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.07115,065,426 - 115,108,004 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.07120,796,217 - 120,840,524 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl7120,796,217 - 120,839,577 (-)Ensemblrn6Rnor6.0
Rnor_5.07120,789,043 - 120,833,600 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.47117,476,702 - 117,520,670 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera7107,456,300 - 107,498,828 (-)NCBICelera
RGSC_v3.17117,514,418 - 117,553,900 (+)NCBI
Cytogenetic Map7q34NCBI
JBrowse:




Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
3. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:12855593   PMID:15640358   PMID:15928951   PMID:17696610   PMID:18283110   PMID:18316482   PMID:20336070   PMID:20551173   PMID:22164254   PMID:22190708   PMID:22530760   PMID:22549958  
PMID:22711701   PMID:22899867   PMID:25416956   PMID:25502805   PMID:27760146   PMID:31515488  


Genomics

Comparative Map Data
Dmc1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr87113,005,278 - 113,047,854 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl7113,005,281 - 113,047,854 (-)EnsemblGRCr8
mRatBN7.27111,124,888 - 111,167,465 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl7111,124,888 - 111,167,952 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx7112,872,520 - 112,915,092 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.07115,096,054 - 115,138,630 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.07115,065,426 - 115,108,004 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.07120,796,217 - 120,840,524 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl7120,796,217 - 120,839,577 (-)Ensemblrn6Rnor6.0
Rnor_5.07120,789,043 - 120,833,600 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.47117,476,702 - 117,520,670 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera7107,456,300 - 107,498,828 (-)NCBICelera
RGSC_v3.17117,514,418 - 117,553,900 (+)NCBI
Cytogenetic Map7q34NCBI
DMC1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382238,509,147 - 38,570,183 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2238,518,905 - 38,570,211 (-)Ensemblhg38GRCh38
GRCh372238,914,953 - 38,966,188 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 362237,244,900 - 37,296,135 (-)NCBIBuild 36Build 36hg18NCBI36
Build 342237,239,453 - 37,290,689NCBI
Celera2222,720,538 - 22,771,771 (-)NCBICelera
Cytogenetic Map22q13.1NCBI
HuRef2221,880,996 - 21,931,997 (-)NCBIHuRef
CHM1_12238,873,735 - 38,925,022 (-)NCBICHM1_1
T2T-CHM13v2.02238,973,412 - 39,034,483 (-)NCBIT2T-CHM13v2.0
Dmc1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391579,445,698 - 79,489,362 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1579,445,698 - 79,489,310 (-)EnsemblGRCm39 EnsemblGRCm39
GRCm381579,561,497 - 79,605,159 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1579,561,497 - 79,605,109 (-)Ensemblmm10GRCm38
MGSCv371579,391,930 - 79,435,514 (-)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv361579,388,755 - 79,432,339 (-)NCBIMGSCv36mm8
Celera1581,685,957 - 81,730,849 (-)NCBICelera
Cytogenetic Map15E1NCBI
cM Map1537.79NCBI
Dmc1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541324,684,073 - 24,724,344 (-)Ensembl
ChiLan1.0NW_00495541324,685,311 - 24,724,269 (-)NCBIChiLan1.0ChiLan1.0
DMC1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22348,372,518 - 48,426,403 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12251,063,957 - 51,117,848 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02219,433,989 - 19,485,804 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12237,253,609 - 37,305,769 (-)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2237,253,609 - 37,305,769 (-)EnsemblpanPan2panpan1.1
DMC1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11026,228,662 - 26,265,377 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1026,230,428 - 26,264,820 (+)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha1026,184,319 - 26,220,549 (+)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.01027,019,568 - 27,056,278 (+)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1027,019,605 - 27,056,226 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11026,741,166 - 26,777,610 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01027,052,510 - 27,089,151 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01027,229,297 - 27,265,765 (+)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Dmc1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244049459,742,723 - 9,778,354 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364922,753,289 - 2,788,102 (+)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049364922,754,694 - 2,788,249 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
DMC1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl59,431,177 - 9,470,113 (+)EnsemblsusScr11Sscrofa11.1
Sscrofa11.159,431,236 - 9,470,333 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.256,712,304 - 6,750,854 (+)NCBISscrofa10.2Sscrofa10.2susScr3
DMC1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11921,179,495 - 21,230,078 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1921,180,194 - 21,228,120 (-)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_023666045104,535,164 - 104,586,450 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Dmc1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247529,548,015 - 9,585,958 (+)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_0046247529,547,327 - 9,585,549 (+)NCBIHetGla 1.0HetGla 1.0hetGla2

Variants

.
Variants in Dmc1
269 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:426
Count of miRNA genes:239
Interacting mature miRNAs:279
Transcripts:ENSRNOT00000018526
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1300179Kidm5Kidney mass QTL 53.51kidney mass (VT:0002707)left kidney wet weight (CMO:0000083)792388565119280177Rat
1331728Bp214Blood pressure QTL 2142.825arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)782111245123048330Rat
1331731Bp216Blood pressure QTL 2162.851arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)7104186212135371468Rat
70159Bp61Blood pressure QTL 610.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)773618702118618702Rat
631687Hcas1Hepatocarcinoma susceptibility QTL 13.90.001liver integrity trait (VT:0010547)liver tumorous lesion volume to total liver volume ratio (CMO:0001082)793302009131686183Rat
1357338Stl17Serum triglyceride level QTL 173.23blood triglyceride amount (VT:0002644)serum triglyceride level (CMO:0000360)771621154114982716Rat
61397Bw17Body weight QTL 176.3body mass (VT:0001259)body weight (CMO:0000012)795485047137014596Rat
631504Cm27Cardiac mass QTL 273.45heart left ventricle mass (VT:0007031)heart left ventricle wet weight (CMO:0000071)746307490127866166Rat
634322Bw12Body weight QTL 120body mass (VT:0001259)body weight (CMO:0000012)785043242130043242Rat
70173Niddm19Non-insulin dependent diabetes mellitus QTL 194.330.00005blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)785497398130497398Rat
1549899Stresp8Stress response QTL 84.370.0008stress-related behavior trait (VT:0010451)defensive burying duration (CMO:0001961)792362341137014596Rat
2317052Aia17Adjuvant induced arthritis QTL 172.13joint integrity trait (VT:0010548)left rear ankle joint diameter (CMO:0002149)783626689128626689Rat
631529Tls2T-lymphoma susceptibility QTL 200.001thymus integrity trait (VT:0010555)percentage of study population developing T-cell lymphomas during a period of time (CMO:0001911)782111382132099989Rat
731176Glom5Glomerulus QTL 52.50.0035kidney glomerulus morphology trait (VT:0005325)count of superficial glomeruli not directly contacting the kidney surface (CMO:0001002)798549867137014596Rat
7411607Foco15Food consumption QTL 150.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)777807807122807807Rat
631201Panci1Pancreas inflammation QTL 100.001pancreas integrity trait (VT:0010560)percentage of study population displaying chronic pancreatitis at a point in time (CMO:0001214)773557047118557047Rat
634336Anxrr17Anxiety related response QTL 173.66locomotor behavior trait (VT:0001392)number of entries into a discrete space in an experimental apparatus (CMO:0000960)71509236116977875Rat
1331768Kidm10Kidney mass QTL 104.62096kidney mass (VT:0002707)left kidney wet weight (CMO:0000083)782111245123048330Rat
2313102Bmd79Bone mineral density QTL 792.30.0001tibia mineral mass (VT:1000283)total volumetric bone mineral density (CMO:0001728)796700404118618702Rat
61357Bp38Blood pressure QTL 381.60.052arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)740540077123682549Rat
1331748Bp215Blood pressure QTL 2154.043arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)7110725024135371468Rat
2316947Rf58Renal function QTL 587.8kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)749682832115766396Rat
10450862Kidm55Kidney mass QTL 554.9kidney mass (VT:0002707)kidney weight (CMO:0000081)772725037117725037Rat
61428Scl3Serum cholesterol level QTL 33.2blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)7100548246137014596Rat
1331746Kidm9Kidney mass QTL 93.934kidney mass (VT:0002707)right kidney wet weight (CMO:0000082)782111245134948181Rat
7411654Foco25Food consumption QTL 259.30.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)777807807122807807Rat
10450856Livw4Liver weight QTL 43.8liver mass (VT:0003402)liver weight (CMO:0000092)772725037117725037Rat
2316955Stl24Serum triglyceride level QTL 247.1blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)749682832115766396Rat
10402855Bp379Blood pressure QTL 3790.21arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)778682549123682549Rat
2316952Pur22Proteinuria QTL 225.2urine protein amount (VT:0005160)urine protein level (CMO:0000591)749682832115766396Rat
631540Bw9Body weight QTL 94.5body mass (VT:0001259)body weight (CMO:0000012)771621154119349044Rat
1358891Bp265Blood pressure QTL 2652.21arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)771827901136544683Rat

Markers in Region
RH137666  
Rat AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map7q34UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
11 2 14 138 31 30 6 14 6 1 127 51 5 123 58 78 24 13 13

Sequence


Ensembl Acc Id: ENSRNOT00000018526   ⟹   ENSRNOP00000018526
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl7113,005,281 - 113,047,854 (-)Ensembl
mRatBN7.2 Ensembl7111,124,888 - 111,167,465 (-)Ensembl
Rnor_6.0 Ensembl7120,796,217 - 120,839,577 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000099897   ⟹   ENSRNOP00000093514
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl7113,005,281 - 113,046,514 (-)Ensembl
mRatBN7.2 Ensembl7111,124,888 - 111,167,952 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000117960   ⟹   ENSRNOP00000093519
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl7113,005,281 - 113,047,854 (-)Ensembl
mRatBN7.2 Ensembl7111,124,888 - 111,167,465 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000129340   ⟹   ENSRNOP00000105288
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl7113,005,281 - 113,047,854 (-)Ensembl
RefSeq Acc Id: NM_001130567   ⟹   NP_001124039
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr87113,005,281 - 113,047,854 (-)NCBI
mRatBN7.27111,124,888 - 111,167,465 (-)NCBI
Rnor_6.07120,796,217 - 120,839,577 (-)NCBI
Rnor_5.07120,789,043 - 120,833,600 (-)NCBI
RGSC_v3.47117,476,702 - 117,520,670 (+)RGD
Celera7107,456,300 - 107,498,828 (-)RGD
Sequence:
RefSeq Acc Id: XM_039079586   ⟹   XP_038935514
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr87113,005,278 - 113,042,085 (-)NCBI
mRatBN7.27111,125,049 - 111,161,691 (-)NCBI
Protein Sequences
Protein RefSeqs NP_001124039 (Get FASTA)   NCBI Sequence Viewer  
  XP_038935514 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein EDM15796 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000018526
  ENSRNOP00000018526.4
  ENSRNOP00000093514.1
  ENSRNOP00000093519.1
  ENSRNOP00000105288.1
RefSeq Acc Id: NP_001124039   ⟸   NM_001130567
- UniProtKB: D3ZJ85 (UniProtKB/TrEMBL),   A6HSS6 (UniProtKB/TrEMBL),   A0A8I6AK83 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000018526   ⟸   ENSRNOT00000018526
RefSeq Acc Id: XP_038935514   ⟸   XM_039079586
- Peptide Label: isoform X1
Ensembl Acc Id: ENSRNOP00000093514   ⟸   ENSRNOT00000099897
Ensembl Acc Id: ENSRNOP00000093519   ⟸   ENSRNOT00000117960
Ensembl Acc Id: ENSRNOP00000105288   ⟸   ENSRNOT00000129340
Protein Domains
RecA family profile

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-D3ZJ85-F1-model_v2 AlphaFold D3ZJ85 1-340 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1307611 AgrOrtholog
BioCyc Gene G2FUF-32756 BioCyc
Ensembl Genes ENSRNOG00000013807 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000018526 ENTREZGENE
  ENSRNOT00000018526.7 UniProtKB/TrEMBL
  ENSRNOT00000099897.2 UniProtKB/TrEMBL
  ENSRNOT00000117960.2 UniProtKB/TrEMBL
  ENSRNOT00000129340.1 UniProtKB/TrEMBL
Gene3D-CATH 3.40.50.300 UniProtKB/TrEMBL
  5' to 3' exonuclease, C-terminal subdomain UniProtKB/TrEMBL
InterPro AAA+_ATPase UniProtKB/TrEMBL
  DMC1_rcmbase UniProtKB/TrEMBL
  DNA_recomb/repair_Rad51_C UniProtKB/TrEMBL
  DNA_recomb/repair_RecA-like UniProtKB/TrEMBL
  DNA_recomb_RecA/RadB_ATP-bd UniProtKB/TrEMBL
  DNA_repair_Rad51/TF_NusA_a-hlx UniProtKB/TrEMBL
  P-loop_NTPase UniProtKB/TrEMBL
  RecA_monomer-monomer_interface UniProtKB/TrEMBL
KEGG Report rno:362960 UniProtKB/TrEMBL
NCBI Gene 362960 ENTREZGENE
PANTHER MEIOTIC RECOMBINATION PROTEIN DMC1/LIM15 HOMOLOG UniProtKB/TrEMBL
  RECA/RAD51/RADA DNA STRAND-PAIRING FAMILY MEMBER UniProtKB/TrEMBL
Pfam HHH_5 UniProtKB/TrEMBL
  Rad51 UniProtKB/TrEMBL
PhenoGen Dmc1 PhenoGen
PIRSF Rad51 UniProtKB/TrEMBL
PROSITE RECA_2 UniProtKB/TrEMBL
  RECA_3 UniProtKB/TrEMBL
RatGTEx ENSRNOG00000013807 RatGTEx
SMART AAA UniProtKB/TrEMBL
Superfamily-SCOP Rad51_N UniProtKB/TrEMBL
  SSF52540 UniProtKB/TrEMBL
UniProt A0A8I6AK83 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6GKP7_RAT UniProtKB/TrEMBL
  A0ABK0L5W6_RAT UniProtKB/TrEMBL
  A6HSS6 ENTREZGENE, UniProtKB/TrEMBL
  D3ZJ85 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2013-05-22 Dmc1  DNA meiotic recombinase 1  Dmc1  DMC1 dosage suppressor of mck1 homolog, meiosis-specific homologous recombination (yeast)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-03-04 Dmc1  DMC1 dosage suppressor of mck1 homolog, meiosis-specific homologous recombination (yeast)  Dmc1h_predicted  disrupted meiotic cDNA 1 homolog (yeast) (predicted)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2006-03-30 Dmc1h_predicted  disrupted meiotic cDNA 1 homolog (yeast) (predicted)    disrupted meiotic cDNA 1 homolog (predicted)  Name updated 1299863 APPROVED
2005-01-12 Dmc1h_predicted  disrupted meiotic cDNA 1 homolog (predicted)      Symbol and Name status set to approved 70820 APPROVED