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Gene: Arel1 (apoptosis resistant E3 ubiquitin protein ligase 1) Rattus norvegicus

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Symbol:

Arel1

Name:

apoptosis resistant E3 ubiquitin protein ligase 1

RGD ID:

1307597

Description:

Predicted to enable ubiquitin protein ligase activity. Predicted to be involved in several processes, including negative regulation of apoptotic process; protein polyubiquitination; and ubiquitin-dependent protein catabolic process. Predicted to be active in cytosol. Orthologous to human AREL1 (apoptosis resistant E3 ubiquitin protein ligase 1); INTERACTS WITH 17alpha-ethynylestradiol; bisphenol A; fipronil.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

apoptosis-resistant E3 ubiquitin protein ligase 1; hypothetical protein LOC299197; LOC299197; RGD1307597; similar to mKIAA0317 protein; uncharacterized protein LOC299197

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	6	110,296,072 - 110,348,751 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	6	110,296,072 - 110,320,832 (-)	Ensembl				GRCr8
mRatBN7.2	6	104,560,556 - 104,617,712 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	6	104,564,986 - 104,617,628 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	6	104,734,704 - 104,763,166 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	6	105,033,876 - 105,062,340 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	6	104,403,226 - 104,431,688 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	6	108,630,790 - 108,796,096 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	6	108,635,220 - 108,796,124 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	6	116,882,562 - 116,922,259 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	6	108,963,520 - 108,992,271 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	6	102,388,676 - 102,416,454 (-)	NCBI		Celera
RGSC_v3.1	6	108,969,035 - 108,999,416 (-)	NCBI
Cytogenetic Map	6	q31	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dimethylhydrazine (ISO)

17alpha-ethynylestradiol (EXP)

17beta-estradiol (ISO)

2-hydroxypropanoic acid (ISO)

4,4'-sulfonyldiphenol (ISO)

acrolein (ISO)

alpha-pinene (ISO)

antirheumatic drug (ISO)

benzene-1,2,4-triol (ISO)

benzo[a]pyrene (ISO)

bisphenol A (EXP,ISO)

chlorpyrifos (ISO)

cisplatin (ISO)

Dibutyl phosphate (ISO)

dicrotophos (ISO)

epoxiconazole (ISO)

ethanol (ISO)

fenthion (ISO)

fipronil (EXP)

folic acid (ISO)

FR900359 (ISO)

fulvestrant (ISO)

gentamycin (EXP)

inulin (ISO)

methidathion (ISO)

ozone (ISO)

paracetamol (ISO)

pentachlorophenol (ISO)

perfluorooctane-1-sulfonic acid (ISO)

pinostrobin (ISO)

rac-lactic acid (ISO)

sodium arsenite (ISO)

sunitinib (ISO)

vinclozolin (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

apoptotic process (IEA)

negative regulation of apoptotic process (IBA,IEA,ISO)

protein K11-linked ubiquitination (IEA,ISO)

protein K33-linked ubiquitination (IEA,ISO)

protein ubiquitination (IEA,ISO)

regulation of inflammatory response (IEA,ISO)

ubiquitin-dependent protein catabolic process (IBA,IEA,ISO)

Cellular Component

cytoplasm (IBA)

cytosol (IBA,IEA,ISO)

Molecular Function

protein binding (ISO)

transferase activity (IEA)

ubiquitin protein ligase activity (IBA,IEA,ISO)

ubiquitin-protein transferase activity (IEA,ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
3.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:23479728	PMID:31578312

Genomics

Comparative Map Data

Arel1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	6	110,296,072 - 110,348,751 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	6	110,296,072 - 110,320,832 (-)	Ensembl				GRCr8
mRatBN7.2	6	104,560,556 - 104,617,712 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	6	104,564,986 - 104,617,628 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	6	104,734,704 - 104,763,166 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	6	105,033,876 - 105,062,340 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	6	104,403,226 - 104,431,688 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	6	108,630,790 - 108,796,096 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	6	108,635,220 - 108,796,124 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	6	116,882,562 - 116,922,259 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	6	108,963,520 - 108,992,271 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	6	102,388,676 - 102,416,454 (-)	NCBI		Celera
RGSC_v3.1	6	108,969,035 - 108,999,416 (-)	NCBI
Cytogenetic Map	6	q31	NCBI

AREL1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	14	74,661,256 - 74,713,080 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	14	74,653,437 - 74,713,117 (-)	Ensembl			hg38	GRCh38
GRCh37	14	75,127,959 - 75,179,783 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	14	74,197,708 - 74,249,560 (-)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	14	74,189,634 - 74,249,560	NCBI
Celera	14	55,166,339 - 55,218,171 (-)	NCBI		Celera
Cytogenetic Map	14	q24.3	NCBI
HuRef	14	55,296,047 - 55,347,878 (-)	NCBI		HuRef
CHM1_1	14	75,067,096 - 75,118,955 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	14	68,870,372 - 68,922,179 (-)	NCBI		T2T-CHM13v2.0

Arel1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	12	84,964,914 - 85,017,674 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	12	84,964,922 - 85,017,674 (-)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	12	84,918,140 - 84,970,878 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	12	84,918,148 - 84,970,900 (-)	Ensembl			mm10	GRCm38
MGSCv37	12	86,259,098 - 86,311,836 (-)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	12	85,807,494 - 85,840,311 (-)	NCBI		MGSCv36	mm8
Celera	12	86,375,198 - 86,428,152 (-)	NCBI		Celera
Cytogenetic Map	12	D1	NCBI
cM Map	12	39.46	NCBI

Arel1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955523	818,535 - 874,189 (+)	Ensembl
ChiLan1.0	NW_004955523	818,535 - 874,189 (+)	NCBI	ChiLan1.0	ChiLan1.0

AREL1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	15	75,744,134 - 75,795,871 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	14	74,960,644 - 75,012,411 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	14	55,213,600 - 55,265,198 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	14	74,060,648 - 74,112,165 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	14	74,060,653 - 74,112,165 (-)	Ensembl			panPan2	panpan1.1

AREL1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	8	47,798,946 - 47,819,364 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	8	47,801,895 - 47,819,318 (-)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	8	47,482,601 - 47,525,768 (-)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	8	48,025,898 - 48,069,077 (-)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	8	48,026,855 - 48,069,067 (-)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	8	47,696,920 - 47,740,078 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	8	47,718,274 - 47,761,437 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	8	48,116,253 - 48,159,412 (-)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Arel1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024408640	28,186,925 - 28,233,947 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936488	3,835,075 - 3,876,403 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936488	3,835,021 - 3,882,055 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

AREL1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	7	97,875,220 - 97,940,876 (-)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	7	97,893,182 - 97,940,932 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	7	103,736,289 - 103,783,732 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

AREL1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	24	51,877,074 - 51,928,042 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
Vero_WHO_p1.0	NW_023666053	40,104,994 - 40,156,793 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Arel1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624734	26,960,548 - 27,009,771 (+)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624734	26,960,511 - 27,014,369 (+)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Arel1
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	7	99,024,284 - 99,049,667 (-)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Arel1
303 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	371
Count of miRNA genes:	202
Interacting mature miRNAs:	270
Transcripts:	ENSRNOT00000006240
Prediction methods:	Miranda, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
4145119	Mcs25	Mammary carcinoma susceptibility QTL 25		0.0001	mammary gland integrity trait (VT:0010552)	ratio of deaths to total study population during a period of time (CMO:0001023)	6	71278722	116278722	Rat
2293088	Iddm28	Insulin dependent diabetes mellitus QTL 28	5.21		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	6	68767270	135411972	Rat
1331799	Bp211	Blood pressure QTL 211	3.66407		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	6	88019181	136741135	Rat
10054138	Gmadr3	Adrenal mass QTL 3	3.68	0.00045	adrenal gland mass (VT:0010420)	both adrenal glands wet weight (CMO:0000164)	6	90871046	135871046	Rat
1581563	Uae33	Urinary albumin excretion QTL 33			urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	6	93560258	136550638	Rat
1641917	Colcr5	Colorectal carcinoma resistance QTL 5	3.18	0.0009	intestine integrity trait (VT:0010554)	benign colorectal tumor number (CMO:0001795)	6	98944780	143944780	Rat
61414	Pia3	Pristane induced arthritis QTL 3	4.5		joint integrity trait (VT:0010548)	post-insult time to onset of experimental arthritis (CMO:0001450)	6	100704576	136029228	Rat
724524	Uae2	Urinary albumin excretion QTL 2	2.7	0.0005	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	6	79198463	144254945	Rat
1358355	Srcrt4	Stress Responsive Cort QTL 4	6.39		blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	6	106095977	147156653	Rat
737827	Hcar11	Hepatocarcinoma resistance QTL 11	4.4		liver integrity trait (VT:0010547)	liver tumorous lesion number (CMO:0001068)	6	46050607	116278722	Rat
2303624	Vencon5	Ventilatory control QTL 5	4.45		respiration trait (VT:0001943)	minute ventilation (CMO:0000132)	6	93778632	138778632	Rat
1576309	Emca7	Estrogen-induced mammary cancer QTL 7	4		mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	6	20859430	113082285	Rat
61329	Eae9	Experimental allergic encephalomyelitis QTL 9	3.7		body mass (VT:0001259)	change in body weight (CMO:0002045)	6	84490437	129490437	Rat
10054123	Srcrt6	Stress Responsive Cort QTL 6	2.5	0.0043	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	6	90871046	135871046	Rat
724536	Uae7	Urinary albumin excretion QTL 7	3.5		urine albumin amount (VT:0002871)	urine albumin level (CMO:0000130)	6	93560258	136550638	Rat
2313399	Anxrr28	Anxiety related response QTL 28			aggression-related behavior trait (VT:0015014)	tameness/aggressiveness composite score (CMO:0002136)	6	101593607	138161926	Rat
1576302	Schws4	Schwannoma susceptibility QTL 4		0.0078	nervous system integrity trait (VT:0010566)	percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017)	6	78204640	123204640	Rat
1581550	Pur8	Proteinuria QTL 8			urine total protein amount (VT:0000032)	urine total protein excretion rate (CMO:0000756)	6	93560258	136550638	Rat
1300075	Glom7	Glomerulus QTL 7	5.6	0.0000002	kidney glomerulus morphology trait (VT:0005325)	count of superficial glomeruli not directly contacting the kidney surface (CMO:0001002)	6	76937178	121937178	Rat
1331789	Rf37	Renal function QTL 37	3.224		kidney blood vessel physiology trait (VT:0100012)	absolute change in renal vascular resistance (CMO:0001900)	6	86494122	112380234	Rat
1331725	Bp212	Blood pressure QTL 212	3.52475		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	6	99437079	125323237	Rat
12801471	Schws9	Schwannoma susceptibility QTL 9			nervous system integrity trait (VT:0010566)	percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017)	6	101593607	146593607	Rat
1331722	Thshl1	Thyroid stimulating hormone level QTL 1	11.7	0.0001	blood thyroid-stimulating hormone amount (VT:0005119)	serum thyroid stimulating hormone level (CMO:0001248)	6	99708426	112483760	Rat

Markers in Region

RH133218

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	1	153,060,525 - 153,060,718 (+)	MAPPER	mRatBN7.2
mRatBN7.2	6	104,565,539 - 104,565,732 (+)	MAPPER	mRatBN7.2
Rnor_6.0	1	163,720,205 - 163,720,397	NCBI	Rnor6.0
Rnor_6.0	6	108,635,774 - 108,635,966	NCBI	Rnor6.0
Rnor_5.0	6	116,917,083 - 116,917,275	UniSTS	Rnor5.0
Rnor_5.0	1	169,923,229 - 169,923,421	UniSTS	Rnor5.0
RGSC_v3.4	1	156,039,820 - 156,040,012	UniSTS	RGSC3.4
RGSC_v3.4	6	108,964,074 - 108,964,266	UniSTS	RGSC3.4
Celera	6	102,389,230 - 102,389,422	UniSTS
Celera	1	151,148,609 - 151,148,801	UniSTS
Cytogenetic Map	6	q31	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	163	91	90	59	92	59	6	356	192	11	142	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001106744	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001433934	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001433935	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001433936	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001433937	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001433938	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001433939	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001433940	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006240333	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008764754	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017594096	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017594097	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039112037	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039112038	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039112039	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063261740	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063261742	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063261743	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063261744	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063261745	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063261746	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_010052071	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC113727	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473982	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ226603	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000006	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000006240 ⟹ ENSRNOP00000006240

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	6	110,296,072 - 110,320,832 (-)	Ensembl
mRatBN7.2 Ensembl	6	104,564,986 - 104,617,628 (-)	Ensembl
Rnor_6.0 Ensembl	6	108,635,220 - 108,660,063 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000086545 ⟹ ENSRNOP00000074719

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0 Ensembl	6	108,637,369 - 108,796,124 (-)	Ensembl

RefSeq Acc Id:

NM_001106744 ⟹ NP_001100214

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	110,296,072 - 110,324,562 (-)	NCBI
mRatBN7.2	6	104,564,986 - 104,593,476 (-)	NCBI
Rnor_6.0	6	108,635,220 - 108,663,764 (-)	NCBI
Rnor_5.0	6	116,882,562 - 116,922,259 (+)	NCBI
RGSC_v3.4	6	108,963,520 - 108,992,271 (-)	RGD
Celera	6	102,388,676 - 102,416,454 (-)	RGD

Sequence:

show sequence

AGTCTGCTCCTGGCTTCCTTTGATAGAGATGTAGAACTCTCAGCTCTCCCAGCACCATGCCTGT
CTGGATGCTGCCATGCTCCCACCTTGATGATAATGGACTGAGCCTCAAAACCTTTGCAGCTGTG
ATCCTCGGCTTTCTGTAGGCATTGAAGAGACCTGATGTTTTACGTTATTGGTGGAATCATAGTG
TCTGTGGTTGCATTCTTTTTCACAATTAAGTTCCTCTTTGAGCTTGCCGCACGTGTAGTCAGCT
TTCTTCAGAATGAAGACCGTGAACGCCGAGGGGACCGGACTATTTATGACTACGTGCGGGGAAA
TTACCTGGATCCCCGGTCCTGCAAAGTGTCCTGGGATTGGAAGGACCCCTATGAGGTGGGCCAC
AGCATGGCCTTCCGAGTGCATTTGTTCTATAAGAATGGACAGCCTTTCCCTGCACACCGACCTG
TGGGACTGCGAGTTCACATCTCTCACGTTGAACTAGCAGTGGAAATTCCAGTGACCCAGGAGGT
CCTCCAGGAGCCAAACTCTAACGTGGTGAAGGTGGCCTTCACTGTGCGCAAGGCTGGGCGCTAT
GAGATTACTGTGAAGCTCGGTGGATTAAATGTGGCCTATAGTCCCTACTACAAAATTTTTCAGC
CTGGAATGGTAGTTCCTTCCAAAACCAAAATTGTGTGCCATTTTTCTACTCTGGTGTTGACGTG
TGGGCAGCCACACACTCTGCAGATAGTGCCCCGAGATGAGTATGACAATCCGACCAACAATTCC
ATGTCCCTGAGAGAAGAGCACAACTACAGCCTGTCCATTCATGAGCTTGGTCCTCAAGAAGAAG
AGAATAGCGAAGTCTCATTTGAGAAGTCAGTGACCTCCAACAGACAGACTTGCCAGGTGTTCTT
GCGGCTCACCCTGCATTCCCGAGGTTGCTTCCATGCCTGCATTTCATACCAGAACCAACCCATC
AATAATGGTGAATTTGACATCATTGTCCTTAGTGAGAATGAGAAGAATATCGTTGAACGAAATG
TGTCCACCTCAGGAGTGAGCATTTACTTTGAGGCTTACCTTTACAATGCTAACAGCTATAGCAG
TGCACCATGGCATCTGCCTCCCATGCACATGAGCTCTTCTCAGCGCCGGCCCTCCACTGCTCTT
GAAGAGGAGGAGGAAGACTCGCCCTCAGAGTGCCACACCCCTGAGAAGGTGAAGAAACCGAAGA
AGGTGTACTGCTATGTGTCACCAAAGCAATTCTCAGTGAAGGAATTTTACCTGAAAATCATCCC
CTGGCGCCTCTACACCTTCCGAGTGTGCCCCGGAACCAAATTCTCATACCTTGGCCCTGACCCT
GTTCACAAGCTGCTCACATTGGTGGTGGATGACGGCATTCAGCCTCCTGTGGAGCTCAGCTGCA
AGGAGAGGAACATTCTAGCAGCCACTTTCATCCGTTCCTTGCACAAGAACATTGGAGGCTCCGA
AACCTTTCAAGACAAGGTGAACTTTTTTCAGAGAGAGCTTCGGCAGGTACATATGAAGAGACCT
CATTCCAAAGTCACCCTGAAGGTCAGCAGACACGCCTTGTTGGAATCGTCTTTGAAGGCCACTC
GGAACTTTTCCATCTCAGATTGGAGCAAGAACTTTGAAGTGGTTTTCCAGGATGAAGAAGCTTT
GGATTGGGGAGGGCCTCGCCGGGAATGGTTTGAGCTAATCTGCAAAGCACTGTTTGATACCACC
AGTCAGCTCTTCACCCGGTTCAGTGACAACAACCAAGCACTAGTGCATCCTAACCCTAATCGCC
CGGCTCACCTGCGCTTGAAGATGTATGAGTTTGCAGGGCGGCTGGTGGGCAAGTGTTTGTATGA
ATCCTCTCTAGGAGGAGCCTACAAGCAGTTGGTCCGTGCCCGTTTCACTCGGTCTTTCCTGGCC
CAAATCATAGGACTACGTATGCATTACAAGTACTTTGAAACAGATGACCCAGAATTCTATAAAT
CCAAAGTATGTTTTATCCTCAACAATGACATGAGTGAGATGGAGCTGGTCTTTGCAGAAGAGAA
ATACAACAAATCAGGTCAACTAGATAAGATTGTAGAACTCATGACAGGTGGAGCTCAAACCCCA
GTCACCAATGCAAATAAAACCTTCTATTTAAACTTGTTGGCTCAGTACCGGCTGGCCAGTCAGG
TGAAAGAGGAGGTGGAGCACTTTCTGAAAGGCTTGAATGAGTTGGTTCCTGAGAACCTTTTGGC
TATTTTTGATGAGAATGAGCTTGAGCTGCTGATGTGTGGGACTGGAGACATCAGTGTGTCTGAC
TTCAAAGCCCATGCTGTAGTGGTGGGTGGATCCTGGCATTTCAGAGAAAAGGTCATGAGGTGGT
TTTGGACTGTGGTTTCCAGTCTGACCCAGGAGGAACTGGCTCGGCTGCTTCAGTTCACAACAGG
CTCTTCTCAGCTCCCACCTGGAGGATTTGCTGCCCTCTGTCCCTCATTTCAGATTATTGCTGCT
CCAACCCACAGCACGCTTCCTACTGCACACACGTGTTTTAACCAACTGTGCCTCCCTACATATG
ACTCATATGAAGAGGTACACAGGATGCTACAGCTGGCCATCAGTGAGGGTTGCGAGGGCTTTGG
CATGCTCTGACCGTTCCTCTGTCACCTGCTTGACTCCCAAGCTCTCTAGAGCATTTGGACACAT
GTTAACAAGCATAACCACTGACCTTAACCACAACCATTAGCCAGAAGATACTGCATGCTCCCTT
GTGTCAGGAGTATTCTGTCATCTACAAGCACTGTTCTTACCTCACCTTCTGTCCACATTTACCA
CAGGCCACTTGAGCATGTGGCACCTATCCGAGCTCTACTCAGTCATGAGAGGAGGACCATGCTG
CTGTCATTTTGTTGGTCCTTGGAAGACCTCTGGCTGGATCTGCCTCAGTGGCTGGAAGAGATGC
ATGACACAGAGGACTCGATTCTGATGGAAAGCCAGTATTGAGACCCGGCAGCCACGCTTCATCC
CAGCACCCTCTGCTCCTTGGAAATGCCCTCCTTGATCTCACTACTTGACCAGACTGGGCAACCC
ATCACCTCTTCTCACCAGTGGTCAGGAGAAGCACAGCTAGAAAGTGGCTCGCACAAGCCATCTG
ATTTGTCCTCCCACCTGATGGCAGGCACAGGCCATGGCACAGCATTAGTTCTCATGGGGACTGG
TAGTACAAAAGGATCTCTTTATGGTGACAGAACTGGAAAAGACACTCCCTGCGGACATTTTTTA
AGATGATCATTAATCTATAAGGAATTTGGTAAGCTTTCTCTTGAATTTGAGCCAGTGAGAAAAG
CAGTCAGAAGAATGTGAAGGATGGTTGTGCTGTAGCCTCCAGTGCTGGGTACGCTTCTCTCTCG
GGGAAGGGCTGTGTCCAGGCATGTGGATGGCTTGAAGACTACTGATGCTTTTCTCTGAGTTTGT
TCTTTGCACTGAAGGAGGACTTGGCCTGACCTCCAACTTACGTAGTTTGTTAAGAGCTGTCTTT
AGCCTTCTGCTGGAGGAGCTTTTGGAGCAACAGACTGGGACAGTGAAAATAGACTGACAGCTCT
CTGGTGGTGATCTCTGGCAGCACTGAGGCAAAGAAACTGTGATCACAGGTCCTGGGTCAAACCA
GTGGGGATAGATGAGGTGGAGATCCAGCAGCAGTAAATACCTAGCAATTCCAAGTGCTTGGCTT
CATCAGTTACCAAGAAGTGGGGAACCATGGAGGGAGAATGCTGTACTGAGTTCGCAGTTACATG
GTGATGACAGAGAACTCAGTTTCAAGGAAGAGTATTTGAATGAAAACAACACGAAGGCCCAGCA
TTGCATGGATTTCCCGATTTCTGTCTTTAATAAGGCTTTTCTATAAGCCACTATTTTCCATGGG
GCACTTAGAATATTACAAGCCATTTTATTGCCAAAACCAGCACGTACACAGAATCCCGAGATAA
GGCAGTTCCTGTGACAGTGCCTTGGCCTCCTGGAAGCAGTCTGAGCCCTCCTGTTCCCAGGGAT
CATGAGAAACAAGCCCTCCTGAGCTGCAAGAAGCCTGACTGACCTCCTTTACAGTCATCTGTTT
TCTCTTGGCGTGGGTGCTCACCTCACTTATCCTTGGGGTTTGGGACCTGGCATCAGGACCTCTT
CACCCAGGGTCCTCCATGCCACATGGTCACTGCTTTCCTCAGGGACCAGGACAAGGTGCTGCTG
CCTGCCCACACTTTCCCAAGGAACACGTACAGAATCATTTAGCCACTACCCTGCTGCTTCTCAG
GCCTCCGCTGGGGCTTCCAGCTGGGTACATGGCTGCTTGGCTGTTTGGGGCGGTCCTTCCTCCT
TGGGTCCACAATCCTGGCTCCAGCACCCCCTGCAGACTACACAGTGGGGGTCGGTGGATGTGAG
TGGCTAGACCTCTCATTTTCAGCTCTAGTCATAGCCCTTCTTCAGCGTCTCCTAGGCACTACTG
CAGCCCCACTGGGGCAGCTAGTATCCCAGGGTGGACTTTAGGCACCAGAGTCTTTAACAAGAAA
ATCCTCTAGTATTGTGTGGTTTTCTATTTTTCCAGTTTACTCTCCTAACTATTCAGAAGCATTT
TGCTCTCTCTTGCATTTTCTTTTACCTTGTTTTTCTAATACTGCTTTGGTACTAGCCCATGTGG
GGAAGAGATACAGTATGTTGGACAGATAAAAAGGTGTGTTATTTCTTGGTCAATTTTCTATTCG
TATTCCTTATTTTGGCCAGTTCTTTTGTTTATGCTTTGTGACATAGGTACTTGGGAGGCTAGCT
GCCCTCCTGGCTTTTGGCTTTTCGGTGTCCTTGAAGGAGACCAGTCATGACCACCAAGGAGAGT
GTCAGCTTGATTCAGAACTTGGCAGAGGCCGAGCTCTGCTGCACTGTCAGGCCAGGTCTGGATG
TCAGCAGTTGGAGATGTAAATATTTTGTACAGTAAATAAAATGCCTACAATAAT

hide sequence

RefSeq Acc Id:

XM_006240333 ⟹ XP_006240395

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	110,296,073 - 110,331,262 (-)	NCBI
mRatBN7.2	6	104,560,556 - 104,600,178 (-)	NCBI
Rnor_6.0	6	108,630,790 - 108,670,464 (-)	NCBI
Rnor_5.0	6	116,882,562 - 116,922,259 (+)	NCBI

Sequence:

show sequence

TATAGAAACGTCTGGTTTAGGAGTATCACAAGGAGGAGGTGATTGATTCTGCCAACCTGGGGAG
AGTCCACAGAGACGCTTGGGAGCTGGCCTGGAAACACAGCAGTGCTTACATTGACTCTTGAAGC
TCGCTAGAGGCGGATCCTGGTATACCAGAGCAGAACCTCTTTCAGTGTTGGTTGTGTCTTACAC
TGGAGGAGCCCAGGAATGAGATATTCTTGGGCTCTCTTTCTTCGCCCCAGCATTCAACCGCTTC
AGTGCAAAAACGCTTGACTCTTTGTTTCCTGGGACACACTTAACCTCAATGAAGATTTGATGGA
CAGATCCTTTCTGGTGACTTTTGGGATTTTTTCTTTCTTTCTCAATGTGCAAGTTAGACAAGTG
AAAGGAGCAGAAAGTTGCCTGCTTTGGTGAATAACTTGATTCTTAGAACATGGGCCCTCGCTTA
AAGTTGCAGCTGTGATCCTCGGCTTTCTGTAGGCATTGAAGAGACCTGATGTTTTACGTTATTG
GTGGAATCATAGTGTCTGTGGTTGCATTCTTTTTCACAATTAAGTTCCTCTTTGAGCTTGCCGC
ACGTGTAGTCAGCTTTCTTCAGAATGAAGACCGTGAACGCCGAGGGGACCGGACTATTTATGAC
TACGTGCGGGGAAATTACCTGGATCCCCGGTCCTGCAAAGTGTCCTGGGATTGGAAGGACCCCT
ATGAGGTGGGCCACAGCATGGCCTTCCGAGTGCATTTGTTCTATAAGAATGGACAGCCTTTCCC
TGCACACCGACCTGTGGGACTGCGAGTTCACATCTCTCACGTTGAACTAGCAGTGGAAATTCCA
GTGACCCAGGAGGTCCTCCAGGAGCCAAACTCTAACGTGGTGAAGGTGGCCTTCACTGTGCGCA
AGGCTGGGCGCTATGAGATTACTGTGAAGCTCGGTGGATTAAATGTGGCCTATAGTCCCTACTA
CAAAATTTTTCAGCCTGGAATGGTAGTTCCTTCCAAAACCAAAATTGTGTGCCATTTTTCTACT
CTGGTGTTGACGTGTGGGCAGCCACACACTCTGCAGATAGTGCCCCGAGATGAGTATGACAATC
CGACCAACAATTCCATGTCCCTGAGAGAAGAGCACAACTACAGCCTGTCCATTCATGAGCTTGG
TCCTCAAGAAGAAGAGAATAGCGAAGTCTCATTTGAGAAGTCAGTGACCTCCAACAGACAGACT
TGCCAGGTGTTCTTGCGGCTCACCCTGCATTCCCGAGGTTGCTTCCATGCCTGCATTTCATACC
AGAACCAACCCATCAATAATGGTGAATTTGACATCATTGTCCTTAGTGAGAATGAGAAGAATAT
CGTTGAACGAAATGTGTCCACCTCAGGAGTGAGCATTTACTTTGAGGCTTACCTTTACAATGCT
AACAGCTATAGCAGTGCACCATGGCATCTGCCTCCCATGCACATGAGCTCTTCTCAGCGCCGGC
CCTCCACTGCTCTTGAAGAGGAGGAGGAAGACTCGCCCTCAGAGTGCCACACCCCTGAGAAGGT
GAAGAAACCGAAGAAGGTGTACTGCTATGTGTCACCAAAGCAATTCTCAGTGAAGGAATTTTAC
CTGAAAATCATCCCCTGGCGCCTCTACACCTTCCGAGTGTGCCCCGGAACCAAATTCTCATACC
TTGGCCCTGACCCTGTTCACAAGCTGCTCACATTGGTGGTGGATGACGGCATTCAGCCTCCTGT
GGAGCTCAGCTGCAAGGAGAGGAACATTCTAGCAGCCACTTTCATCCGTTCCTTGCACAAGAAC
ATTGGAGGCTCCGAAACCTTTCAAGACAAGGTGAACTTTTTTCAGAGAGAGCTTCGGCAGGTAC
ATATGAAGAGACCTCATTCCAAAGTCACCCTGAAGGTCAGCAGACACGCCTTGTTGGAATCGTC
TTTGAAGGCCACTCGGAACTTTTCCATCTCAGATTGGAGCAAGAACTTTGAAGTGGTTTTCCAG
GATGAAGAAGCTTTGGATTGGGGAGGGCCTCGCCGGGAATGGTTTGAGCTAATCTGCAAAGCAC
TGTTTGATACCACCAGTCAGCTCTTCACCCGGTTCAGTGACAACAACCAAGCACTAGTGCATCC
TAACCCTAATCGCCCGGCTCACCTGCGCTTGAAGATGTATGAGTTTGCAGGGCGGCTGGTGGGC
AAGTGTTTGTATGAATCCTCTCTAGGAGGAGCCTACAAGCAGTTGGTCCGTGCCCGTTTCACTC
GGTCTTTCCTGGCCCAAATCATAGGACTACGTATGCATTACAAGTACTTTGAAACAGATGACCC
AGAATTCTATAAATCCAAAGTATGTTTTATCCTCAACAATGACATGAGTGAGATGGAGCTGGTC
TTTGCAGAAGAGAAATACAACAAATCAGGTCAACTAGATAAGATTGTAGAACTCATGACAGGTG
GAGCTCAAACCCCAGTCACCAATGCAAATAAAACCTTCTATTTAAACTTGTTGGCTCAGTACCG
GCTGGCCAGTCAGGTGAAAGAGGAGGTGGAGCACTTTCTGAAAGGCTTGAATGAGTTGGTTCCT
GAGAACCTTTTGGCTATTTTTGATGAGAATGAGCTTGAGCTGCTGATGTGTGGGACTGGAGACA
TCAGTGTGTCTGACTTCAAAGCCCATGCTGTAGTGGTGGGTGGATCCTGGCATTTCAGAGAAAA
GGTCATGAGGTGGTTTTGGACTGTGGTTTCCAGTCTGACCCAGGAGGAACTGGCTCGGCTGCTT
CAGTTCACAACAGGCTCTTCTCAGCTCCCACCTGGAGGATTTGCTGCCCTCTGTCCCTCATTTC
AGATTATTGCTGCTCCAACCCACAGCACGCTTCCTACTGCACACACGTGTTTTAACCAACTGTG
CCTCCCTACATATGACTCATATGAAGAGGTACACAGGATGCTACAGCTGGCCATCAGTGAGGGT
TGCGAGGGCTTTGGCATGCTCTGACCGTTCCTCTGTCACCTGCTTGACTCCCAAGCTCTCTAGA
GCATTTGGACACATGTTAACAAGCATAACCACTGACCTTAACCACAACCATTAGCCAGAAGATA
CTGCATGCTCCCTTGTGTCAGGAGTATTCTGTCATCTACAAGCACTGTTCTTACCTCACCTTCT
GTCCACATTTACCACAGGCCACTTGAGCATGTGGCACCTATCCGAGCTCTACTCAGTCATGAGA
GGAGGACCATGCTGCTGTCATTTTGTTGGTCCTTGGAAGACCTCTGGCTGGATCTGCCTCAGTG
GCTGGAAGAGATGCATGACACAGAGGACTCGATTCTGATGGAAAGCCAGTATTGAGACCCGGCA
GCCACGCTTCATCCCAGCACCCTCTGCTCCTTGGAAATGCCCTCCTTGATCTCACTACTTGACC
AGACTGGGCAACCCATCACCTCTTCTCACCAGTGGTCAGGAGAAGCACAGCTAGAAAGTGGCTC
GCACAAGCCATCTGATTTGTCCTCCCACCTGATGGCAGGCACAGGCCATGGCACAGCATTAGTT
CTCATGGGGACTGGTAGTACAAAAGGATCTCTTTATGGTGACAGAACTGGAAAAGACACTCCCT
GCGGACATTTTTTAAGATGATCATTAATCTATAAGGAATTTGGTAAGCTTTCTCTTGAATTTGA
GCCAGTGAGAAAAGCAGTCAGAAGAATGTGAAGGATGGTTGTGCTGTAGCCTCCAGTGCTGGGT
ACGCTTCTCTCTCGGGGAAGGGCTGTGTCCAGGCATGTGGATGGCTTGAAGACTACTGATGCTT
TTCTCTGAGTTTGTTCTTTGCACTGAAGGAGGACTTGGCCTGACCTCCAACTTACGTAGTTTGT
TAAGAGCTGTCTTTAGCCTTCTGCTGGAGGAGCTTTTGGAGCAACAGACTGGGACAGTGAAAAT
AGACTGACAGCTCTCTGGTGGTGATCTCTGGCAGCACTGAGGCAAAGAAACTGTGATCACAGGT
CCTGGGTCAAACCAGTGGGGATAGATGAGGTGGAGATCCAGCAGCAGTAAATACCTAGCAATTC
CAAGTGCTTGGCTTCATCAGTTACCAAGAAGTGGGGAACCATGGAGGGAGAATGCTGTACTGAG
TTCGCAGTTACATGGTGATGACAGAGAACTCAGTTTCAAGGAAGAGTATTTGAATGAAAACAAC
ACGAAGGCCCAGCATTGCATGGATTTCCCGATTTCTGTCTTTAATAAGGCTTTTCTATAAGCCA
CTATTTTCCATGGGGCACTTAGAATATTACAAGCCATTTTATTGCCAAAACCAGCACGTACACA
GAATCCCGAGATAAGGCAGTTCCTGTGACAGTGCCTTGGCCTCCTGGAAGCAGTCTGAGCCCTC
CTGTTCCCAGGGATCATGAGAAACAAGCCCTCCTGAGCTGCAAGAAGCCTGACTGACCTCCTTT
ACAGTCATCTGTTTTCTCTTGGCGTGGGTGCTCACCTCACTTATCCTTGGGGTTTGGGACCTGG
CATCAGGACCTCTTCACCCAGGGTCCTCCATGCCACATGGTCACTGCTTTCCTCAGGGACCAGG
ACAAGGTGCTGCTGCCTGCCCACACTTTCCCAAGGAACACGTACAGAATCATTTAGCCACTACC
CTGCTGCTTCTCAGGCCTCCGCTGGGGCTTCCAGCTGGGTACATGGCTGCTTGGCTGTTTGGGG
CGGTCCTTCCTCCTTGGGTCCACAATCCTGGCTCCAGCACCCCCTGCAGACTACACAGTGGGGG
TCGGTGGATGTGAGTGGCTAGACCTCTCATTTTCAGCTCTAGTCATAGCCCTTCTTCAGCGTCT
CCTAGGCACTACTGCAGCCCCACTGGGGCAGCTAGTATCCCAGGGTGGACTTTAGGCACCAGAG
TCTTTAACAAGAAAATCCTCTAGTATTGTGTGGTTTTCTATTTTTCCAGTTTACTCTCCTAACT
ATTCAGAAGCATTTTGCTCTCTCTTGCATTTTCTTTTACCTTGTTTTTCTAATACTGCTTTGGT
ACTAGCCCATGTGGGGAAGAGATACAGTATGTTGGACAGATAAAAAGGTGTGTTATTTCTTGGT
CAATTTTCTATTCGTATTCCTTATTTTGGCCAGTTCTTTTGTTTATGCTTTGTGACATAGGTAC
TTGGGAGGCTAGCTGCCCTCCTGGCTTTTGGCTTTTCGGTGTCCTTGAAGGAGACCAGTCATGA
CCACCAAGGAGAGTGTCAGCTTGATTCAGAACTTGGCAGAGGCCGAGCTCTGCTGCACTGTCAG
GCCAGGTCTGGATGTCAGCAGTTGGAGATGTAAATATTTTGTACAGTAAATAAAATGCCTACAA
TAATCAAGGGCTAAATGACTGTTTGAGTGGGGGTGGGGCATGCTTAACTGGAAGATGGGAAGGA
AACTGTTTAGAGATCTTTATGTGTTCTTGGAGGCAGGAAGCAATCTGTTGTGGACAGAGTGTGT
ACTTGGGGTCCTGGTATTAGCTTGTCTCCAATACCTGTCCTCAGGCCCAGAAAGGGCCACACTG
CTCACTGTAGATAGCAGCCCAGTGGGGAAAGTGTTTGTGCTCAGAGCCTAAGAAAGAAACTAGT
TTGATATGACCAGAGGCTTATCTTTTATGCCTTTAAGCATTAATTGCTGTTTTCTACATCAGGA
AAGTCAGCAGAGAAAATTTCTAAATGAGTTAAAGGGGGGCTAGAGATAGCTTAGCAGTTGGGGA
TGCTTCTCATACAGGACCTGGCTTTGGGTCCTGGTACAATCTGCTTACAACTGCCTGCGATTCC
AGTTCCATGGGGACCTGGGGACCCAGGATGTCTTCAGGCATCTCTACAGGGTACACACAAACTT
ACACAGGCACATACACTGAAAAAAAAAAAAAAGGCCAGCCTGAAGGGTCAAGGAAGGTGGATGT
GGTTACTGCATGCTGTAGCCTAGCCACTTGGGTGGCAGAGCTAGGAGGGTCACTTGAGAACAGC
CTGAGTAACACAGTGGTACCTTGCCTCATAAAACAAAACTCTGTTAGTAGCAAACAGTAACAAA
GCCCCAAGCAAAACCATAAAAGAGAAGTGTCCAAGGATAAGTCACCCAGCCTCCAGAGGTACAC
AGTCAGCACTTGACAGCCTTTGAGATTTCACATCATTTGTATTTACTTGCCACCAGCCTCCATG
TGCTGTCCCCTTGATTGAGTCTTCACAGTTGATTTGAAAAGCCCTCACAGAGCATCTTGGCTCC
ATGAAAATCTAGCCCAGACACAGGGCTAACCTAATTAATCTCATGTTCTGAGATGGCTGCATTG
GATGCTCCATGGCATTTATGAGCTGTCTGTGGCCTGGTCTGACATGATTGTGATTCTCTGTGAT
TGATAGTCAGTAGGATGCTATTAGGTATCATATGGGTATGGATGGTACTGAAAAATGACTCAAT
GGTAAATTATCCCCGAACTTGAGGACTAGGCTAGTATTTCAGACTCAATAGGTCTCTGTGTAGT
CCAATCTAAGCTGGCCTAGATCTCACAGAGATTCTCCTGCCTCTACCTCCTGAGTGCTGGGATT
AAAGTCCTGTACCACCATGTGCTTGGCTCCAGAACTGTATTTGAGGTGCAGTGAGTAGTCATGG
CTTTAAAATCTGTGTGAAGGAACTTTTGTACAACTGTGAGCTGATAACCTGAGGAAAGAGACTT
GCCAAGTTTGAAATGATCCCTCGTAAAGAACACAAGATACCCTTGAGGATGTAACTGAGCAGGG
ACAAGTCCTAAAATTATTTTTTATCTCTATGTTGGAAAATCCTTAGTCACATGCAAATGGGATA
ATTACAATGAGGTCAGACACAGTACTCTGATGTTTATCTCTGGTAACTGTGTCTGCAGAGAAAG
CCTCATTTGAAGAGACCTTTTGTCTATACTTTCCTTATATGAAACAGCACCAATTAGTAGAGGC
CAAATTCCTGGAGCACACTTCACTGACAAGCATCGGAGTTTCAAGAGTGCTAGAGAAAGGGAAA
CAACCGTCCCCAGCAAGCCATCGACACCACGATCTGTTGAAGCTGTAAGAGGGTCAGTCTCTGA
TGAGAGGGACTTGTACCTCTTGGGGATGAATTCATCTTGATGGCCCCCACTTTTCACCTGCACT
GTTTACTGTTTTGTCAAAGATGGAGAATGAAGCTTTCTCTCCCTTACAGGCCAAGAGTTCCCTC
TCTCTAGAACTCCCACTCAGAGAAGCTGCCAAGACATTCCTCTGCCCATTAACAGAGTCAGGGA
TGTCAGAACTTGCAAGCCAGCTGGAGAAGGTGGACGACTCTTAGGCTCTTTTGAATGCAGAATG
TTGGGTTATTGTGTAAGAAGATTATGTGTCATTTTGGGGTCTCCCAAGTCCTAGGTTTAATTCT
CCCAAGTTGTCATTTTCAACTTTTGCAGAAGACTCCTGGAATCTGGTTCCACTCCTGGGCTTGT
AGTCTCCTTTTTCCTCTAGTCCTGCCCACAGCTGTGTTTCAGCAAACATGCCTTGTATATGGGA
CACCACAGAAAGCTTTGGACACTAGATAGAGTGTGGTCCCAGCCTGTGAGTACCTCAGTTCTGT
TCCCTTTCCCTGAGGCTTAGGCATACAGACTCAGGGCCACATGTCTCCATGTGTGACATTCTGT
TTTATTTTCACGGGGGTAGGGAATGTTTATGTGTTTGGAGACAGTATCAAGCAGTAACAGCCAC
AAATGAAATGTCTAGCTTCTTTACAAAGGGAAATTACTCTCCTTACTGACTTTCAGAGAAGAAA
GGACTCTTATAAAGATGGACTCAAATAGACCCAGGGGGCAAGTTCTCATTGTACCATAAATAGT
CTATCACCTAGTAGATCCTGGACCAGACAGGAAGAGGGAACTAAATGATCTGAAGGCCAGTTCT
CCTCTAACCTGCTCTCCCAGACACAGAAGACCTGGATATTGACTTTGGCAGCAGGGACCTGGCT
AGTTGCCTGCAGCTCAGTGAATGAAATTAAAATCTTGAGTGAATGGGGAAAGGGAGTATTTTCA
ACATTAATAGCAATCAAACAGATTTGTGCTTGGTTGAAATAATTTGGATGACAGAGGAAAGACC
AAGCCATTTTCAGTGAACCCCAAAGCATGAAGAAGTGAATCAACACTGAAGAGCCATGACATTG
GTTTGTGGCCACCATGGGTGGGAACATCGAATTCCATTCCAGTTTTCCCATAATGTCAGTCAAG
CCAGGAAATGAGTCTTGAGTTCTCTGATGAGCGCTGTGACCATCTTGTTCCTCCCTGGAGGTTG
GGTAGTTCTAGTTAATTCAACAGCTAGATGGGTGCTAGTTTGGACCCTACCTCAAGAATACTGT
CTGCTCCCTTAAAACGATTTCATTGGAGCCTTGTTCATGATAGTACCAACATGGTTTCTTCAGA
CAGACCCCGGAAATGAAAGTAGAGGGTACTTTGTGTCTCACTCAGGGAAATAAACATTGAACGA
ATCCAGGAAGGCTCATGTGGGCTGCCCTGGGAACCTTGTGGGAGGGGCCGGGTAGCAGCCATCC
ATCTGCAAACTCCATAATGATTCTCATCTATTTCTGCCCCAGAACCTTGAAAATTCTATTGTCT
TGGCATCTAAGTTATGTCTTCCAGACAGCCTCTCACACCAGGAACCAGCACAAATCTCTCTTGT
CAGACCATATCTTGAGTTTTGATTTTAAAAATGTCACTGTGGATCAGCTATGGGGAGACAAAAG
GAAGCAAAACTCCAGCCCTGACTTTTGAGGTGAGCCTGGGCTTAGGGGCTTGGTGCAATGAGAA
CAGGAGGCCAAGATAGTGGTTGGCACAAGGATACGGAGAACTCTGGAAGCGGAGCCAGAACCTC
CAAGGACTGAGGCCCAGGAAAGCCTGGCACAGGGAATAGCTGGGTATTTAACCAGGAACACTCA
CTCATTTTCCCTCAGCCTTGGCAGTACGTCAGAGCAAGAGTTCTAGAAGGGTCCACATCCTTTC
TATTGTCCCCACCCCAGCTTCAATCATCATCCCAAACATCTGCTTCCAATTTGAGCCCTTGCTT
CTCTGCCTGATTGCATACTAAACCATGGGTAGTGAGAGAGGGTGGGCCTGCAGGTGTCGGGTGG
GGAAGAAGAAAAGGTTTTGGGTAAAGCTGCCCTAAGATCTCTTTCAGGTGGTACAGCAGACTAG
GAAGCTGCACACACGTGCGCGTGCACACACACACACACACACACACACACACACACATCCCACA
CACACACACACACACACACACACAATCTTTTATATGCACATGTGCCTCCAAAATCTAGCCACTA
ACTTGTTTCACTTTCTTGGGTAAAGGGAGTGTCCAGGGGGAAGAAATTGTGACTAGCTGGAGAA
AGCCTGGACCACGGCAGTCCTAGTTTTCAGAGGCAGCTCAGCCAGTCCAGGGAGCCCACAGAGG
TGGTTAGTGCCTAAAACAAGCAGTGAGGTGCTAATGGGTCCTTAAACACCTCTGCCTGGCTTTT
AAGCTGAAACAGACACAAGTAAGTTGGAGCCTTAAAACTAGCCTGCCGCTGGGTGGCCAGTGAG
AAGCAGCCAGAGGAGCTGTCAATCACAGCATCCCTAATGGTTTCAGGAGGCTAAAGCTGTTTCT
CCAGCACTTGTCCTGATTCTCAGACCATTGCTAAGTAAAAGAACATAACCTAAAGGGAAAATTT
CAGAACTTGTGTAATGACAGGTGATGTTTTAAATCGTGTTTATTCCACACAGACCCTATGTGGA
ATAAAATGTGTAAGCATT

hide sequence

RefSeq Acc Id:

XM_008764754 ⟹ XP_008762976

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	110,296,073 - 110,348,751 (-)	NCBI
mRatBN7.2	6	104,560,556 - 104,617,711 (-)	NCBI
Rnor_6.0	6	108,630,790 - 108,796,096 (-)	NCBI

Sequence:

show sequence

GGAAACGGAAAAGCTCGGAGCCGGCTCTTAACGCTGGCGAAGATCTACACTGGGGGTTTTTCTG
GGGGGCGGGTGGAGGGTAGGTTTTGTGCTGGATGAAGCGGCTACTTCCTCGGACCCCGGAACTA
GGACTTGGCCACGCAGCAGCTCCAGTTCGGGCGGATCCTGGTATACCAGAGCAGAACCTCTTTC
AGTGTTGGTTGTGTCTTACACTGGAGGAGCCCAGGAATGAGATATTCTTGGGCTCTCTTTCTTC
GCCCCAGCATTCAACCGCTTCAGTGCAAAAACGCTTGACTCTTTGTTTCCTGGGACACACTTAA
CCTCAATGAAGATTTGATGGACAGATCCTTTCTGGTGACTTTTGGGATTTTTTCTTTCTTTCTC
AATGTGCAAGTTAGACAAGTGAAAGGAGCAGAAAGTTGCCTGCTTTGGTGAATAACTTGATTCT
TAGAACATGGGCCCTCGCTTAAAGTTGCAGCTGTGATCCTCGGCTTTCTGTAGGCATTGAAGAG
ACCTGATGTTTTACGTTATTGGTGGAATCATAGTGTCTGTGGTTGCATTCTTTTTCACAATTAA
GTTCCTCTTTGAGCTTGCCGCACGTGTAGTCAGCTTTCTTCAGAATGAAGACCGTGAACGCCGA
GGGGACCGGACTATTTATGACTACGTGCGGGGAAATTACCTGGATCCCCGGTCCTGCAAAGTGT
CCTGGGATTGGAAGGACCCCTATGAGGTGGGCCACAGCATGGCCTTCCGAGTGCATTTGTTCTA
TAAGAATGGACAGCCTTTCCCTGCACACCGACCTGTGGGACTGCGAGTTCACATCTCTCACGTT
GAACTAGCAGTGGAAATTCCAGTGACCCAGGAGGTCCTCCAGGAGCCAAACTCTAACGTGGTGA
AGGTGGCCTTCACTGTGCGCAAGGCTGGGCGCTATGAGATTACTGTGAAGCTCGGTGGATTAAA
TGTGGCCTATAGTCCCTACTACAAAATTTTTCAGCCTGGAATGGTAGTTCCTTCCAAAACCAAA
ATTGTGTGCCATTTTTCTACTCTGGTGTTGACGTGTGGGCAGCCACACACTCTGCAGATAGTGC
CCCGAGATGAGTATGACAATCCGACCAACAATTCCATGTCCCTGAGAGAAGAGCACAACTACAG
CCTGTCCATTCATGAGCTTGGTCCTCAAGAAGAAGAGAATAGCGAAGTCTCATTTGAGAAGTCA
GTGACCTCCAACAGACAGACTTGCCAGGTGTTCTTGCGGCTCACCCTGCATTCCCGAGGTTGCT
TCCATGCCTGCATTTCATACCAGAACCAACCCATCAATAATGGTGAATTTGACATCATTGTCCT
TAGTGAGAATGAGAAGAATATCGTTGAACGAAATGTGTCCACCTCAGGAGTGAGCATTTACTTT
GAGGCTTACCTTTACAATGCTAACAGCTATAGCAGTGCACCATGGCATCTGCCTCCCATGCACA
TGAGCTCTTCTCAGCGCCGGCCCTCCACTGCTCTTGAAGAGGAGGAGGAAGACTCGCCCTCAGA
GTGCCACACCCCTGAGAAGGTGAAGAAACCGAAGAAGGTGTACTGCTATGTGTCACCAAAGCAA
TTCTCAGTGAAGGAATTTTACCTGAAAATCATCCCCTGGCGCCTCTACACCTTCCGAGTGTGCC
CCGGAACCAAATTCTCATACCTTGGCCCTGACCCTGTTCACAAGCTGCTCACATTGGTGGTGGA
TGACGGCATTCAGCCTCCTGTGGAGCTCAGCTGCAAGGAGAGGAACATTCTAGCAGCCACTTTC
ATCCGTTCCTTGCACAAGAACATTGGAGGCTCCGAAACCTTTCAAGACAAGGTGAACTTTTTTC
AGAGAGAGCTTCGGCAGGTACATATGAAGAGACCTCATTCCAAAGTCACCCTGAAGGTCAGCAG
ACACGCCTTGTTGGAATCGTCTTTGAAGGCCACTCGGAACTTTTCCATCTCAGATTGGAGCAAG
AACTTTGAAGTGGTTTTCCAGGATGAAGAAGCTTTGGATTGGGGAGGGCCTCGCCGGGAATGGT
TTGAGCTAATCTGCAAAGCACTGTTTGATACCACCAGTCAGCTCTTCACCCGGTTCAGTGACAA
CAACCAAGCACTAGTGCATCCTAACCCTAATCGCCCGGCTCACCTGCGCTTGAAGATGTATGAG
TTTGCAGGGCGGCTGGTGGGCAAGTGTTTGTATGAATCCTCTCTAGGAGGAGCCTACAAGCAGT
TGGTCCGTGCCCGTTTCACTCGGTCTTTCCTGGCCCAAATCATAGGACTACGTATGCATTACAA
GTACTTTGAAACAGATGACCCAGAATTCTATAAATCCAAAGTATGTTTTATCCTCAACAATGAC
ATGAGTGAGATGGAGCTGGTCTTTGCAGAAGAGAAATACAACAAATCAGGTCAACTAGATAAGA
TTGTAGAACTCATGACAGGTGGAGCTCAAACCCCAGTCACCAATGCAAATAAAACCTTCTATTT
AAACTTGTTGGCTCAGTACCGGCTGGCCAGTCAGGTGAAAGAGGAGGTGGAGCACTTTCTGAAA
GGCTTGAATGAGTTGGTTCCTGAGAACCTTTTGGCTATTTTTGATGAGAATGAGCTTGAGCTGC
TGATGTGTGGGACTGGAGACATCAGTGTGTCTGACTTCAAAGCCCATGCTGTAGTGGTGGGTGG
ATCCTGGCATTTCAGAGAAAAGGTCATGAGGTGGTTTTGGACTGTGGTTTCCAGTCTGACCCAG
GAGGAACTGGCTCGGCTGCTTCAGTTCACAACAGGCTCTTCTCAGCTCCCACCTGGAGGATTTG
CTGCCCTCTGTCCCTCATTTCAGATTATTGCTGCTCCAACCCACAGCACGCTTCCTACTGCACA
CACGTGTTTTAACCAACTGTGCCTCCCTACATATGACTCATATGAAGAGGTACACAGGATGCTA
CAGCTGGCCATCAGTGAGGGTTGCGAGGGCTTTGGCATGCTCTGACCGTTCCTCTGTCACCTGC
TTGACTCCCAAGCTCTCTAGAGCATTTGGACACATGTTAACAAGCATAACCACTGACCTTAACC
ACAACCATTAGCCAGAAGATACTGCATGCTCCCTTGTGTCAGGAGTATTCTGTCATCTACAAGC
ACTGTTCTTACCTCACCTTCTGTCCACATTTACCACAGGCCACTTGAGCATGTGGCACCTATCC
GAGCTCTACTCAGTCATGAGAGGAGGACCATGCTGCTGTCATTTTGTTGGTCCTTGGAAGACCT
CTGGCTGGATCTGCCTCAGTGGCTGGAAGAGATGCATGACACAGAGGACTCGATTCTGATGGAA
AGCCAGTATTGAGACCCGGCAGCCACGCTTCATCCCAGCACCCTCTGCTCCTTGGAAATGCCCT
CCTTGATCTCACTACTTGACCAGACTGGGCAACCCATCACCTCTTCTCACCAGTGGTCAGGAGA
AGCACAGCTAGAAAGTGGCTCGCACAAGCCATCTGATTTGTCCTCCCACCTGATGGCAGGCACA
GGCCATGGCACAGCATTAGTTCTCATGGGGACTGGTAGTACAAAAGGATCTCTTTATGGTGACA
GAACTGGAAAAGACACTCCCTGCGGACATTTTTTAAGATGATCATTAATCTATAAGGAATTTGG
TAAGCTTTCTCTTGAATTTGAGCCAGTGAGAAAAGCAGTCAGAAGAATGTGAAGGATGGTTGTG
CTGTAGCCTCCAGTGCTGGGTACGCTTCTCTCTCGGGGAAGGGCTGTGTCCAGGCATGTGGATG
GCTTGAAGACTACTGATGCTTTTCTCTGAGTTTGTTCTTTGCACTGAAGGAGGACTTGGCCTGA
CCTCCAACTTACGTAGTTTGTTAAGAGCTGTCTTTAGCCTTCTGCTGGAGGAGCTTTTGGAGCA
ACAGACTGGGACAGTGAAAATAGACTGACAGCTCTCTGGTGGTGATCTCTGGCAGCACTGAGGC
AAAGAAACTGTGATCACAGGTCCTGGGTCAAACCAGTGGGGATAGATGAGGTGGAGATCCAGCA
GCAGTAAATACCTAGCAATTCCAAGTGCTTGGCTTCATCAGTTACCAAGAAGTGGGGAACCATG
GAGGGAGAATGCTGTACTGAGTTCGCAGTTACATGGTGATGACAGAGAACTCAGTTTCAAGGAA
GAGTATTTGAATGAAAACAACACGAAGGCCCAGCATTGCATGGATTTCCCGATTTCTGTCTTTA
ATAAGGCTTTTCTATAAGCCACTATTTTCCATGGGGCACTTAGAATATTACAAGCCATTTTATT
GCCAAAACCAGCACGTACACAGAATCCCGAGATAAGGCAGTTCCTGTGACAGTGCCTTGGCCTC
CTGGAAGCAGTCTGAGCCCTCCTGTTCCCAGGGATCATGAGAAACAAGCCCTCCTGAGCTGCAA
GAAGCCTGACTGACCTCCTTTACAGTCATCTGTTTTCTCTTGGCGTGGGTGCTCACCTCACTTA
TCCTTGGGGTTTGGGACCTGGCATCAGGACCTCTTCACCCAGGGTCCTCCATGCCACATGGTCA
CTGCTTTCCTCAGGGACCAGGACAAGGTGCTGCTGCCTGCCCACACTTTCCCAAGGAACACGTA
CAGAATCATTTAGCCACTACCCTGCTGCTTCTCAGGCCTCCGCTGGGGCTTCCAGCTGGGTACA
TGGCTGCTTGGCTGTTTGGGGCGGTCCTTCCTCCTTGGGTCCACAATCCTGGCTCCAGCACCCC
CTGCAGACTACACAGTGGGGGTCGGTGGATGTGAGTGGCTAGACCTCTCATTTTCAGCTCTAGT
CATAGCCCTTCTTCAGCGTCTCCTAGGCACTACTGCAGCCCCACTGGGGCAGCTAGTATCCCAG
GGTGGACTTTAGGCACCAGAGTCTTTAACAAGAAAATCCTCTAGTATTGTGTGGTTTTCTATTT
TTCCAGTTTACTCTCCTAACTATTCAGAAGCATTTTGCTCTCTCTTGCATTTTCTTTTACCTTG
TTTTTCTAATACTGCTTTGGTACTAGCCCATGTGGGGAAGAGATACAGTATGTTGGACAGATAA
AAAGGTGTGTTATTTCTTGGTCAATTTTCTATTCGTATTCCTTATTTTGGCCAGTTCTTTTGTT
TATGCTTTGTGACATAGGTACTTGGGAGGCTAGCTGCCCTCCTGGCTTTTGGCTTTTCGGTGTC
CTTGAAGGAGACCAGTCATGACCACCAAGGAGAGTGTCAGCTTGATTCAGAACTTGGCAGAGGC
CGAGCTCTGCTGCACTGTCAGGCCAGGTCTGGATGTCAGCAGTTGGAGATGTAAATATTTTGTA
CAGTAAATAAAATGCCTACAATAATCAAGGGCTAAATGACTGTTTGAGTGGGGGTGGGGCATGC
TTAACTGGAAGATGGGAAGGAAACTGTTTAGAGATCTTTATGTGTTCTTGGAGGCAGGAAGCAA
TCTGTTGTGGACAGAGTGTGTACTTGGGGTCCTGGTATTAGCTTGTCTCCAATACCTGTCCTCA
GGCCCAGAAAGGGCCACACTGCTCACTGTAGATAGCAGCCCAGTGGGGAAAGTGTTTGTGCTCA
GAGCCTAAGAAAGAAACTAGTTTGATATGACCAGAGGCTTATCTTTTATGCCTTTAAGCATTAA
TTGCTGTTTTCTACATCAGGAAAGTCAGCAGAGAAAATTTCTAAATGAGTTAAAGGGGGGCTAG
AGATAGCTTAGCAGTTGGGGATGCTTCTCATACAGGACCTGGCTTTGGGTCCTGGTACAATCTG
CTTACAACTGCCTGCGATTCCAGTTCCATGGGGACCTGGGGACCCAGGATGTCTTCAGGCATCT
CTACAGGGTACACACAAACTTACACAGGCACATACACTGAAAAAAAAAAAAAAGGCCAGCCTGA
AGGGTCAAGGAAGGTGGATGTGGTTACTGCATGCTGTAGCCTAGCCACTTGGGTGGCAGAGCTA
GGAGGGTCACTTGAGAACAGCCTGAGTAACACAGTGGTACCTTGCCTCATAAAACAAAACTCTG
TTAGTAGCAAACAGTAACAAAGCCCCAAGCAAAACCATAAAAGAGAAGTGTCCAAGGATAAGTC
ACCCAGCCTCCAGAGGTACACAGTCAGCACTTGACAGCCTTTGAGATTTCACATCATTTGTATT
TACTTGCCACCAGCCTCCATGTGCTGTCCCCTTGATTGAGTCTTCACAGTTGATTTGAAAAGCC
CTCACAGAGCATCTTGGCTCCATGAAAATCTAGCCCAGACACAGGGCTAACCTAATTAATCTCA
TGTTCTGAGATGGCTGCATTGGATGCTCCATGGCATTTATGAGCTGTCTGTGGCCTGGTCTGAC
ATGATTGTGATTCTCTGTGATTGATAGTCAGTAGGATGCTATTAGGTATCATATGGGTATGGAT
GGTACTGAAAAATGACTCAATGGTAAATTATCCCCGAACTTGAGGACTAGGCTAGTATTTCAGA
CTCAATAGGTCTCTGTGTAGTCCAATCTAAGCTGGCCTAGATCTCACAGAGATTCTCCTGCCTC
TACCTCCTGAGTGCTGGGATTAAAGTCCTGTACCACCATGTGCTTGGCTCCAGAACTGTATTTG
AGGTGCAGTGAGTAGTCATGGCTTTAAAATCTGTGTGAAGGAACTTTTGTACAACTGTGAGCTG
ATAACCTGAGGAAAGAGACTTGCCAAGTTTGAAATGATCCCTCGTAAAGAACACAAGATACCCT
TGAGGATGTAACTGAGCAGGGACAAGTCCTAAAATTATTTTTTATCTCTATGTTGGAAAATCCT
TAGTCACATGCAAATGGGATAATTACAATGAGGTCAGACACAGTACTCTGATGTTTATCTCTGG
TAACTGTGTCTGCAGAGAAAGCCTCATTTGAAGAGACCTTTTGTCTATACTTTCCTTATATGAA
ACAGCACCAATTAGTAGAGGCCAAATTCCTGGAGCACACTTCACTGACAAGCATCGGAGTTTCA
AGAGTGCTAGAGAAAGGGAAACAACCGTCCCCAGCAAGCCATCGACACCACGATCTGTTGAAGC
TGTAAGAGGGTCAGTCTCTGATGAGAGGGACTTGTACCTCTTGGGGATGAATTCATCTTGATGG
CCCCCACTTTTCACCTGCACTGTTTACTGTTTTGTCAAAGATGGAGAATGAAGCTTTCTCTCCC
TTACAGGCCAAGAGTTCCCTCTCTCTAGAACTCCCACTCAGAGAAGCTGCCAAGACATTCCTCT
GCCCATTAACAGAGTCAGGGATGTCAGAACTTGCAAGCCAGCTGGAGAAGGTGGACGACTCTTA
GGCTCTTTTGAATGCAGAATGTTGGGTTATTGTGTAAGAAGATTATGTGTCATTTTGGGGTCTC
CCAAGTCCTAGGTTTAATTCTCCCAAGTTGTCATTTTCAACTTTTGCAGAAGACTCCTGGAATC
TGGTTCCACTCCTGGGCTTGTAGTCTCCTTTTTCCTCTAGTCCTGCCCACAGCTGTGTTTCAGC
AAACATGCCTTGTATATGGGACACCACAGAAAGCTTTGGACACTAGATAGAGTGTGGTCCCAGC
CTGTGAGTACCTCAGTTCTGTTCCCTTTCCCTGAGGCTTAGGCATACAGACTCAGGGCCACATG
TCTCCATGTGTGACATTCTGTTTTATTTTCACGGGGGTAGGGAATGTTTATGTGTTTGGAGACA
GTATCAAGCAGTAACAGCCACAAATGAAATGTCTAGCTTCTTTACAAAGGGAAATTACTCTCCT
TACTGACTTTCAGAGAAGAAAGGACTCTTATAAAGATGGACTCAAATAGACCCAGGGGGCAAGT
TCTCATTGTACCATAAATAGTCTATCACCTAGTAGATCCTGGACCAGACAGGAAGAGGGAACTA
AATGATCTGAAGGCCAGTTCTCCTCTAACCTGCTCTCCCAGACACAGAAGACCTGGATATTGAC
TTTGGCAGCAGGGACCTGGCTAGTTGCCTGCAGCTCAGTGAATGAAATTAAAATCTTGAGTGAA
TGGGGAAAGGGAGTATTTTCAACATTAATAGCAATCAAACAGATTTGTGCTTGGTTGAAATAAT
TTGGATGACAGAGGAAAGACCAAGCCATTTTCAGTGAACCCCAAAGCATGAAGAAGTGAATCAA
CACTGAAGAGCCATGACATTGGTTTGTGGCCACCATGGGTGGGAACATCGAATTCCATTCCAGT
TTTCCCATAATGTCAGTCAAGCCAGGAAATGAGTCTTGAGTTCTCTGATGAGCGCTGTGACCAT
CTTGTTCCTCCCTGGAGGTTGGGTAGTTCTAGTTAATTCAACAGCTAGATGGGTGCTAGTTTGG
ACCCTACCTCAAGAATACTGTCTGCTCCCTTAAAACGATTTCATTGGAGCCTTGTTCATGATAG
TACCAACATGGTTTCTTCAGACAGACCCCGGAAATGAAAGTAGAGGGTACTTTGTGTCTCACTC
AGGGAAATAAACATTGAACGAATCCAGGAAGGCTCATGTGGGCTGCCCTGGGAACCTTGTGGGA
GGGGCCGGGTAGCAGCCATCCATCTGCAAACTCCATAATGATTCTCATCTATTTCTGCCCCAGA
ACCTTGAAAATTCTATTGTCTTGGCATCTAAGTTATGTCTTCCAGACAGCCTCTCACACCAGGA
ACCAGCACAAATCTCTCTTGTCAGACCATATCTTGAGTTTTGATTTTAAAAATGTCACTGTGGA
TCAGCTATGGGGAGACAAAAGGAAGCAAAACTCCAGCCCTGACTTTTGAGGTGAGCCTGGGCTT
AGGGGCTTGGTGCAATGAGAACAGGAGGCCAAGATAGTGGTTGGCACAAGGATACGGAGAACTC
TGGAAGCGGAGCCAGAACCTCCAAGGACTGAGGCCCAGGAAAGCCTGGCACAGGGAATAGCTGG
GTATTTAACCAGGAACACTCACTCATTTTCCCTCAGCCTTGGCAGTACGTCAGAGCAAGAGTTC
TAGAAGGGTCCACATCCTTTCTATTGTCCCCACCCCAGCTTCAATCATCATCCCAAACATCTGC
TTCCAATTTGAGCCCTTGCTTCTCTGCCTGATTGCATACTAAACCATGGGTAGTGAGAGAGGGT
GGGCCTGCAGGTGTCGGGTGGGGAAGAAGAAAAGGTTTTGGGTAAAGCTGCCCTAAGATCTCTT
TCAGGTGGTACAGCAGACTAGGAAGCTGCACACACGTGCGCGTGCACACACACACACACACACA
CACACACACACACATCCCACACACACACACACACACACACACACAATCTTTTATATGCACATGT
GCCTCCAAAATCTAGCCACTAACTTGTTTCACTTTCTTGGGTAAAGGGAGTGTCCAGGGGGAAG
AAATTGTGACTAGCTGGAGAAAGCCTGGACCACGGCAGTCCTAGTTTTCAGAGGCAGCTCAGCC
AGTCCAGGGAGCCCACAGAGGTGGTTAGTGCCTAAAACAAGCAGTGAGGTGCTAATGGGTCCTT
AAACACCTCTGCCTGGCTTTTAAGCTGAAACAGACACAAGTAAGTTGGAGCCTTAAAACTAGCC
TGCCGCTGGGTGGCCAGTGAGAAGCAGCCAGAGGAGCTGTCAATCACAGCATCCCTAATGGTTT
CAGGAGGCTAAAGCTGTTTCTCCAGCACTTGTCCTGATTCTCAGACCATTGCTAAGTAAAAGAA
CATAACCTAAAGGGAAAATTTCAGAACTTGTGTAATGACAGGTGATGTTTTAAATCGTGTTTAT
TCCACACAGACCCTATGTGGAATAAAATGTGTAAGCATT

hide sequence

RefSeq Acc Id:

XM_017594097 ⟹ XP_017449586

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	110,296,073 - 110,348,751 (-)	NCBI
mRatBN7.2	6	104,560,556 - 104,617,711 (-)	NCBI
Rnor_6.0	6	108,630,790 - 108,796,096 (-)	NCBI

Sequence:

show sequence

GGAAACGGAAAAGCTCGGAGCCGGCTCTTAACGCTGGCGAAGATCTACACTGGGGGTTTTTCTG
GGGGGCGGGTGGAGGGTAGGTTTTGTGCTGGATGAAGCGGCTACTTCCTCGGACCCCGGAACTA
GGACTTGGCCACGCAGCAGCTCCAGTTCGGGCGGATCCTGGTATACCAGAGCAGAACCTCTTTC
AGTGTTGGTTGTGTCTTACACTGGAGGAGCCCAGGAATGAGATATTCTTGGGCTCTCTTTCTTC
GCCCCAGCATTCAACCGCTTCAGTGCAAAAACGCTTGACTCTTTGTTTCCTGGGACACACTTAA
CCTCAATGAAGATTTGATGGACAGATCCTTTCTGGTGACTTTTGGGATTTTTTCTTTCTTTCTC
AATGTGCAAGTTAGACAAGTGAAAGGAGCAGAAAGTTGCCTGCTTTGGTGAATAACTTGATTCT
TAGAACATGGGCCCTCGCTTAAAGTTGCAGCTGTGATCCTCGGCTTTCTGTAGGCATTGAAGAG
ACCTGATGTTTTACGTTATTGGTGGAATCATAGTGTCTGTGGTTGCATTCTTTTTCACAATTAA
GTTCCTCTTTGAGCTTGCCGCACGTGTAGTCAGCTTTCTTCAGAATGAAGACCGTGAACGCCGA
GGGGACCGGACTATTTATGACTACGTGCGGGGAAATTACCTGGATCCCCGGTCCTGCAAAGTGT
CCTGGGATTGGAAGGACCCCTATGAGTTGTTCTATAAGAATGGACAGCCTTTCCCTGCACACCG
ACCTGTGGGACTGCGAGTTCACATCTCTCACGTTGAACTAGCAGTGGAAATTCCAGTGACCCAG
GAGGTCCTCCAGGAGCCAAACTCTAACGTGGTGAAGGTGGCCTTCACTGTGCGCAAGGCTGGGC
GCTATGAGATTACTGTGAAGCTCGGTGGATTAAATGTGGCCTATAGTCCCTACTACAAAATTTT
TCAGCCTGGAATGGTAGTTCCTTCCAAAACCAAAATTGTGTGCCATTTTTCTACTCTGGTGTTG
ACGTGTGGGCAGCCACACACTCTGCAGATAGTGCCCCGAGATGAGTATGACAATCCGACCAACA
ATTCCATGTCCCTGAGAGAAGAGCACAACTACAGCCTGTCCATTCATGAGCTTGGTCCTCAAGA
AGAAGAGAATAGCGAAGTCTCATTTGAGAAGTCAGTGACCTCCAACAGACAGACTTGCCAGGTG
TTCTTGCGGCTCACCCTGCATTCCCGAGGTTGCTTCCATGCCTGCATTTCATACCAGAACCAAC
CCATCAATAATGGTGAATTTGACATCATTGTCCTTAGTGAGAATGAGAAGAATATCGTTGAACG
AAATGTGTCCACCTCAGGAGTGAGCATTTACTTTGAGGCTTACCTTTACAATGCTAACAGCTAT
AGCAGTGCACCATGGCATCTGCCTCCCATGCACATGAGCTCTTCTCAGCGCCGGCCCTCCACTG
CTCTTGAAGAGGAGGAGGAAGACTCGCCCTCAGAGTGCCACACCCCTGAGAAGGTGAAGAAACC
GAAGAAGGTGTACTGCTATGTGTCACCAAAGCAATTCTCAGTGAAGGAATTTTACCTGAAAATC
ATCCCCTGGCGCCTCTACACCTTCCGAGTGTGCCCCGGAACCAAATTCTCATACCTTGGCCCTG
ACCCTGTTCACAAGCTGCTCACATTGGTGGTGGATGACGGCATTCAGCCTCCTGTGGAGCTCAG
CTGCAAGGAGAGGAACATTCTAGCAGCCACTTTCATCCGTTCCTTGCACAAGAACATTGGAGGC
TCCGAAACCTTTCAAGACAAGGTGAACTTTTTTCAGAGAGAGCTTCGGCAGGTACATATGAAGA
GACCTCATTCCAAAGTCACCCTGAAGGTCAGCAGACACGCCTTGTTGGAATCGTCTTTGAAGGC
CACTCGGAACTTTTCCATCTCAGATTGGAGCAAGAACTTTGAAGTGGTTTTCCAGGATGAAGAA
GCTTTGGATTGGGGAGGGCCTCGCCGGGAATGGTTTGAGCTAATCTGCAAAGCACTGTTTGATA
CCACCAGTCAGCTCTTCACCCGGTTCAGTGACAACAACCAAGCACTAGTGCATCCTAACCCTAA
TCGCCCGGCTCACCTGCGCTTGAAGATGTATGAGTTTGCAGGGCGGCTGGTGGGCAAGTGTTTG
TATGAATCCTCTCTAGGAGGAGCCTACAAGCAGTTGGTCCGTGCCCGTTTCACTCGGTCTTTCC
TGGCCCAAATCATAGGACTACGTATGCATTACAAGTACTTTGAAACAGATGACCCAGAATTCTA
TAAATCCAAAGTATGTTTTATCCTCAACAATGACATGAGTGAGATGGAGCTGGTCTTTGCAGAA
GAGAAATACAACAAATCAGGTCAACTAGATAAGATTGTAGAACTCATGACAGGTGGAGCTCAAA
CCCCAGTCACCAATGCAAATAAAACCTTCTATTTAAACTTGTTGGCTCAGTACCGGCTGGCCAG
TCAGGTGAAAGAGGAGGTGGAGCACTTTCTGAAAGGCTTGAATGAGTTGGTTCCTGAGAACCTT
TTGGCTATTTTTGATGAGAATGAGCTTGAGCTGCTGATGTGTGGGACTGGAGACATCAGTGTGT
CTGACTTCAAAGCCCATGCTGTAGTGGTGGGTGGATCCTGGCATTTCAGAGAAAAGGTCATGAG
GTGGTTTTGGACTGTGGTTTCCAGTCTGACCCAGGAGGAACTGGCTCGGCTGCTTCAGTTCACA
ACAGGCTCTTCTCAGCTCCCACCTGGAGGATTTGCTGCCCTCTGTCCCTCATTTCAGATTATTG
CTGCTCCAACCCACAGCACGCTTCCTACTGCACACACGTGTTTTAACCAACTGTGCCTCCCTAC
ATATGACTCATATGAAGAGGTACACAGGATGCTACAGCTGGCCATCAGTGAGGGTTGCGAGGGC
TTTGGCATGCTCTGACCGTTCCTCTGTCACCTGCTTGACTCCCAAGCTCTCTAGAGCATTTGGA
CACATGTTAACAAGCATAACCACTGACCTTAACCACAACCATTAGCCAGAAGATACTGCATGCT
CCCTTGTGTCAGGAGTATTCTGTCATCTACAAGCACTGTTCTTACCTCACCTTCTGTCCACATT
TACCACAGGCCACTTGAGCATGTGGCACCTATCCGAGCTCTACTCAGTCATGAGAGGAGGACCA
TGCTGCTGTCATTTTGTTGGTCCTTGGAAGACCTCTGGCTGGATCTGCCTCAGTGGCTGGAAGA
GATGCATGACACAGAGGACTCGATTCTGATGGAAAGCCAGTATTGAGACCCGGCAGCCACGCTT
CATCCCAGCACCCTCTGCTCCTTGGAAATGCCCTCCTTGATCTCACTACTTGACCAGACTGGGC
AACCCATCACCTCTTCTCACCAGTGGTCAGGAGAAGCACAGCTAGAAAGTGGCTCGCACAAGCC
ATCTGATTTGTCCTCCCACCTGATGGCAGGCACAGGCCATGGCACAGCATTAGTTCTCATGGGG
ACTGGTAGTACAAAAGGATCTCTTTATGGTGACAGAACTGGAAAAGACACTCCCTGCGGACATT
TTTTAAGATGATCATTAATCTATAAGGAATTTGGTAAGCTTTCTCTTGAATTTGAGCCAGTGAG
AAAAGCAGTCAGAAGAATGTGAAGGATGGTTGTGCTGTAGCCTCCAGTGCTGGGTACGCTTCTC
TCTCGGGGAAGGGCTGTGTCCAGGCATGTGGATGGCTTGAAGACTACTGATGCTTTTCTCTGAG
TTTGTTCTTTGCACTGAAGGAGGACTTGGCCTGACCTCCAACTTACGTAGTTTGTTAAGAGCTG
TCTTTAGCCTTCTGCTGGAGGAGCTTTTGGAGCAACAGACTGGGACAGTGAAAATAGACTGACA
GCTCTCTGGTGGTGATCTCTGGCAGCACTGAGGCAAAGAAACTGTGATCACAGGTCCTGGGTCA
AACCAGTGGGGATAGATGAGGTGGAGATCCAGCAGCAGTAAATACCTAGCAATTCCAAGTGCTT
GGCTTCATCAGTTACCAAGAAGTGGGGAACCATGGAGGGAGAATGCTGTACTGAGTTCGCAGTT
ACATGGTGATGACAGAGAACTCAGTTTCAAGGAAGAGTATTTGAATGAAAACAACACGAAGGCC
CAGCATTGCATGGATTTCCCGATTTCTGTCTTTAATAAGGCTTTTCTATAAGCCACTATTTTCC
ATGGGGCACTTAGAATATTACAAGCCATTTTATTGCCAAAACCAGCACGTACACAGAATCCCGA
GATAAGGCAGTTCCTGTGACAGTGCCTTGGCCTCCTGGAAGCAGTCTGAGCCCTCCTGTTCCCA
GGGATCATGAGAAACAAGCCCTCCTGAGCTGCAAGAAGCCTGACTGACCTCCTTTACAGTCATC
TGTTTTCTCTTGGCGTGGGTGCTCACCTCACTTATCCTTGGGGTTTGGGACCTGGCATCAGGAC
CTCTTCACCCAGGGTCCTCCATGCCACATGGTCACTGCTTTCCTCAGGGACCAGGACAAGGTGC
TGCTGCCTGCCCACACTTTCCCAAGGAACACGTACAGAATCATTTAGCCACTACCCTGCTGCTT
CTCAGGCCTCCGCTGGGGCTTCCAGCTGGGTACATGGCTGCTTGGCTGTTTGGGGCGGTCCTTC
CTCCTTGGGTCCACAATCCTGGCTCCAGCACCCCCTGCAGACTACACAGTGGGGGTCGGTGGAT
GTGAGTGGCTAGACCTCTCATTTTCAGCTCTAGTCATAGCCCTTCTTCAGCGTCTCCTAGGCAC
TACTGCAGCCCCACTGGGGCAGCTAGTATCCCAGGGTGGACTTTAGGCACCAGAGTCTTTAACA
AGAAAATCCTCTAGTATTGTGTGGTTTTCTATTTTTCCAGTTTACTCTCCTAACTATTCAGAAG
CATTTTGCTCTCTCTTGCATTTTCTTTTACCTTGTTTTTCTAATACTGCTTTGGTACTAGCCCA
TGTGGGGAAGAGATACAGTATGTTGGACAGATAAAAAGGTGTGTTATTTCTTGGTCAATTTTCT
ATTCGTATTCCTTATTTTGGCCAGTTCTTTTGTTTATGCTTTGTGACATAGGTACTTGGGAGGC
TAGCTGCCCTCCTGGCTTTTGGCTTTTCGGTGTCCTTGAAGGAGACCAGTCATGACCACCAAGG
AGAGTGTCAGCTTGATTCAGAACTTGGCAGAGGCCGAGCTCTGCTGCACTGTCAGGCCAGGTCT
GGATGTCAGCAGTTGGAGATGTAAATATTTTGTACAGTAAATAAAATGCCTACAATAATCAAGG
GCTAAATGACTGTTTGAGTGGGGGTGGGGCATGCTTAACTGGAAGATGGGAAGGAAACTGTTTA
GAGATCTTTATGTGTTCTTGGAGGCAGGAAGCAATCTGTTGTGGACAGAGTGTGTACTTGGGGT
CCTGGTATTAGCTTGTCTCCAATACCTGTCCTCAGGCCCAGAAAGGGCCACACTGCTCACTGTA
GATAGCAGCCCAGTGGGGAAAGTGTTTGTGCTCAGAGCCTAAGAAAGAAACTAGTTTGATATGA
CCAGAGGCTTATCTTTTATGCCTTTAAGCATTAATTGCTGTTTTCTACATCAGGAAAGTCAGCA
GAGAAAATTTCTAAATGAGTTAAAGGGGGGCTAGAGATAGCTTAGCAGTTGGGGATGCTTCTCA
TACAGGACCTGGCTTTGGGTCCTGGTACAATCTGCTTACAACTGCCTGCGATTCCAGTTCCATG
GGGACCTGGGGACCCAGGATGTCTTCAGGCATCTCTACAGGGTACACACAAACTTACACAGGCA
CATACACTGAAAAAAAAAAAAAAGGCCAGCCTGAAGGGTCAAGGAAGGTGGATGTGGTTACTGC
ATGCTGTAGCCTAGCCACTTGGGTGGCAGAGCTAGGAGGGTCACTTGAGAACAGCCTGAGTAAC
ACAGTGGTACCTTGCCTCATAAAACAAAACTCTGTTAGTAGCAAACAGTAACAAAGCCCCAAGC
AAAACCATAAAAGAGAAGTGTCCAAGGATAAGTCACCCAGCCTCCAGAGGTACACAGTCAGCAC
TTGACAGCCTTTGAGATTTCACATCATTTGTATTTACTTGCCACCAGCCTCCATGTGCTGTCCC
CTTGATTGAGTCTTCACAGTTGATTTGAAAAGCCCTCACAGAGCATCTTGGCTCCATGAAAATC
TAGCCCAGACACAGGGCTAACCTAATTAATCTCATGTTCTGAGATGGCTGCATTGGATGCTCCA
TGGCATTTATGAGCTGTCTGTGGCCTGGTCTGACATGATTGTGATTCTCTGTGATTGATAGTCA
GTAGGATGCTATTAGGTATCATATGGGTATGGATGGTACTGAAAAATGACTCAATGGTAAATTA
TCCCCGAACTTGAGGACTAGGCTAGTATTTCAGACTCAATAGGTCTCTGTGTAGTCCAATCTAA
GCTGGCCTAGATCTCACAGAGATTCTCCTGCCTCTACCTCCTGAGTGCTGGGATTAAAGTCCTG
TACCACCATGTGCTTGGCTCCAGAACTGTATTTGAGGTGCAGTGAGTAGTCATGGCTTTAAAAT
CTGTGTGAAGGAACTTTTGTACAACTGTGAGCTGATAACCTGAGGAAAGAGACTTGCCAAGTTT
GAAATGATCCCTCGTAAAGAACACAAGATACCCTTGAGGATGTAACTGAGCAGGGACAAGTCCT
AAAATTATTTTTTATCTCTATGTTGGAAAATCCTTAGTCACATGCAAATGGGATAATTACAATG
AGGTCAGACACAGTACTCTGATGTTTATCTCTGGTAACTGTGTCTGCAGAGAAAGCCTCATTTG
AAGAGACCTTTTGTCTATACTTTCCTTATATGAAACAGCACCAATTAGTAGAGGCCAAATTCCT
GGAGCACACTTCACTGACAAGCATCGGAGTTTCAAGAGTGCTAGAGAAAGGGAAACAACCGTCC
CCAGCAAGCCATCGACACCACGATCTGTTGAAGCTGTAAGAGGGTCAGTCTCTGATGAGAGGGA
CTTGTACCTCTTGGGGATGAATTCATCTTGATGGCCCCCACTTTTCACCTGCACTGTTTACTGT
TTTGTCAAAGATGGAGAATGAAGCTTTCTCTCCCTTACAGGCCAAGAGTTCCCTCTCTCTAGAA
CTCCCACTCAGAGAAGCTGCCAAGACATTCCTCTGCCCATTAACAGAGTCAGGGATGTCAGAAC
TTGCAAGCCAGCTGGAGAAGGTGGACGACTCTTAGGCTCTTTTGAATGCAGAATGTTGGGTTAT
TGTGTAAGAAGATTATGTGTCATTTTGGGGTCTCCCAAGTCCTAGGTTTAATTCTCCCAAGTTG
TCATTTTCAACTTTTGCAGAAGACTCCTGGAATCTGGTTCCACTCCTGGGCTTGTAGTCTCCTT
TTTCCTCTAGTCCTGCCCACAGCTGTGTTTCAGCAAACATGCCTTGTATATGGGACACCACAGA
AAGCTTTGGACACTAGATAGAGTGTGGTCCCAGCCTGTGAGTACCTCAGTTCTGTTCCCTTTCC
CTGAGGCTTAGGCATACAGACTCAGGGCCACATGTCTCCATGTGTGACATTCTGTTTTATTTTC
ACGGGGGTAGGGAATGTTTATGTGTTTGGAGACAGTATCAAGCAGTAACAGCCACAAATGAAAT
GTCTAGCTTCTTTACAAAGGGAAATTACTCTCCTTACTGACTTTCAGAGAAGAAAGGACTCTTA
TAAAGATGGACTCAAATAGACCCAGGGGGCAAGTTCTCATTGTACCATAAATAGTCTATCACCT
AGTAGATCCTGGACCAGACAGGAAGAGGGAACTAAATGATCTGAAGGCCAGTTCTCCTCTAACC
TGCTCTCCCAGACACAGAAGACCTGGATATTGACTTTGGCAGCAGGGACCTGGCTAGTTGCCTG
CAGCTCAGTGAATGAAATTAAAATCTTGAGTGAATGGGGAAAGGGAGTATTTTCAACATTAATA
GCAATCAAACAGATTTGTGCTTGGTTGAAATAATTTGGATGACAGAGGAAAGACCAAGCCATTT
TCAGTGAACCCCAAAGCATGAAGAAGTGAATCAACACTGAAGAGCCATGACATTGGTTTGTGGC
CACCATGGGTGGGAACATCGAATTCCATTCCAGTTTTCCCATAATGTCAGTCAAGCCAGGAAAT
GAGTCTTGAGTTCTCTGATGAGCGCTGTGACCATCTTGTTCCTCCCTGGAGGTTGGGTAGTTCT
AGTTAATTCAACAGCTAGATGGGTGCTAGTTTGGACCCTACCTCAAGAATACTGTCTGCTCCCT
TAAAACGATTTCATTGGAGCCTTGTTCATGATAGTACCAACATGGTTTCTTCAGACAGACCCCG
GAAATGAAAGTAGAGGGTACTTTGTGTCTCACTCAGGGAAATAAACATTGAACGAATCCAGGAA
GGCTCATGTGGGCTGCCCTGGGAACCTTGTGGGAGGGGCCGGGTAGCAGCCATCCATCTGCAAA
CTCCATAATGATTCTCATCTATTTCTGCCCCAGAACCTTGAAAATTCTATTGTCTTGGCATCTA
AGTTATGTCTTCCAGACAGCCTCTCACACCAGGAACCAGCACAAATCTCTCTTGTCAGACCATA
TCTTGAGTTTTGATTTTAAAAATGTCACTGTGGATCAGCTATGGGGAGACAAAAGGAAGCAAAA
CTCCAGCCCTGACTTTTGAGGTGAGCCTGGGCTTAGGGGCTTGGTGCAATGAGAACAGGAGGCC
AAGATAGTGGTTGGCACAAGGATACGGAGAACTCTGGAAGCGGAGCCAGAACCTCCAAGGACTG
AGGCCCAGGAAAGCCTGGCACAGGGAATAGCTGGGTATTTAACCAGGAACACTCACTCATTTTC
CCTCAGCCTTGGCAGTACGTCAGAGCAAGAGTTCTAGAAGGGTCCACATCCTTTCTATTGTCCC
CACCCCAGCTTCAATCATCATCCCAAACATCTGCTTCCAATTTGAGCCCTTGCTTCTCTGCCTG
ATTGCATACTAAACCATGGGTAGTGAGAGAGGGTGGGCCTGCAGGTGTCGGGTGGGGAAGAAGA
AAAGGTTTTGGGTAAAGCTGCCCTAAGATCTCTTTCAGGTGGTACAGCAGACTAGGAAGCTGCA
CACACGTGCGCGTGCACACACACACACACACACACACACACACACACATCCCACACACACACAC
ACACACACACACACAATCTTTTATATGCACATGTGCCTCCAAAATCTAGCCACTAACTTGTTTC
ACTTTCTTGGGTAAAGGGAGTGTCCAGGGGGAAGAAATTGTGACTAGCTGGAGAAAGCCTGGAC
CACGGCAGTCCTAGTTTTCAGAGGCAGCTCAGCCAGTCCAGGGAGCCCACAGAGGTGGTTAGTG
CCTAAAACAAGCAGTGAGGTGCTAATGGGTCCTTAAACACCTCTGCCTGGCTTTTAAGCTGAAA
CAGACACAAGTAAGTTGGAGCCTTAAAACTAGCCTGCCGCTGGGTGGCCAGTGAGAAGCAGCCA
GAGGAGCTGTCAATCACAGCATCCCTAATGGTTTCAGGAGGCTAAAGCTGTTTCTCCAGCACTT
GTCCTGATTCTCAGACCATTGCTAAGTAAAAGAACATAACCTAAAGGGAAAATTTCAGAACTTG
TGTAATGACAGGTGATGTTTTAAATCGTGTTTATTCCACACAGACCCTATGTGGAATAAAATGT
GTAAGCATT

hide sequence

RefSeq Acc Id:

XM_039112037 ⟹ XP_038967965

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	110,296,073 - 110,348,747 (-)	NCBI
mRatBN7.2	6	104,560,556 - 104,617,711 (-)	NCBI

RefSeq Acc Id:

XM_039112038 ⟹ XP_038967966

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	110,296,073 - 110,348,747 (-)	NCBI
mRatBN7.2	6	104,560,556 - 104,617,711 (-)	NCBI

RefSeq Acc Id:

XM_039112039 ⟹ XP_038967967

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	110,296,073 - 110,341,738 (-)	NCBI
mRatBN7.2	6	104,560,556 - 104,610,643 (-)	NCBI

RefSeq Acc Id:

XM_063261740 ⟹ XP_063117810

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	110,296,073 - 110,348,679 (-)	NCBI

RefSeq Acc Id:

XM_063261742 ⟹ XP_063117812

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	110,296,073 - 110,348,749 (-)	NCBI

RefSeq Acc Id:

XM_063261743 ⟹ XP_063117813

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	110,296,073 - 110,348,751 (-)	NCBI

RefSeq Acc Id:

XM_063261744 ⟹ XP_063117814

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	110,296,073 - 110,348,679 (-)	NCBI

RefSeq Acc Id:

XM_063261745 ⟹ XP_063117815

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	110,296,073 - 110,331,262 (-)	NCBI

RefSeq Acc Id:

XM_063261746 ⟹ XP_063117816

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	110,296,073 - 110,325,371 (-)	NCBI

RefSeq Acc Id:

XR_010052071

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	110,304,605 - 110,348,751 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_001100214	(Get FASTA)	NCBI Sequence Viewer
	NP_001420863	(Get FASTA)	NCBI Sequence Viewer
	NP_001420864	(Get FASTA)	NCBI Sequence Viewer
	NP_001420865	(Get FASTA)	NCBI Sequence Viewer
	NP_001420866	(Get FASTA)	NCBI Sequence Viewer
	NP_001420867	(Get FASTA)	NCBI Sequence Viewer
	NP_001420868	(Get FASTA)	NCBI Sequence Viewer
	NP_001420869	(Get FASTA)	NCBI Sequence Viewer
	XP_006240395	(Get FASTA)	NCBI Sequence Viewer
	XP_008762976	(Get FASTA)	NCBI Sequence Viewer
	XP_017449586	(Get FASTA)	NCBI Sequence Viewer
	XP_038967965	(Get FASTA)	NCBI Sequence Viewer
	XP_038967966	(Get FASTA)	NCBI Sequence Viewer
	XP_038967967	(Get FASTA)	NCBI Sequence Viewer
	XP_063117810	(Get FASTA)	NCBI Sequence Viewer
	XP_063117812	(Get FASTA)	NCBI Sequence Viewer
	XP_063117813	(Get FASTA)	NCBI Sequence Viewer
	XP_063117814	(Get FASTA)	NCBI Sequence Viewer
	XP_063117815	(Get FASTA)	NCBI Sequence Viewer
	XP_063117816	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDL81535	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000006240
	ENSRNOP00000006240.5

RefSeq Acc Id:

NP_001100214 ⟸ NM_001106744

- UniProtKB:

D3ZVC4 (UniProtKB/TrEMBL), A6JDZ1 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MFYVIGGIIVSVVAFFFTIKFLFELAARVVSFLQNEDRERRGDRTIYDYVRGNYLDPRSCKVSW
DWKDPYEVGHSMAFRVHLFYKNGQPFPAHRPVGLRVHISHVELAVEIPVTQEVLQEPNSNVVKV
AFTVRKAGRYEITVKLGGLNVAYSPYYKIFQPGMVVPSKTKIVCHFSTLVLTCGQPHTLQIVPR
DEYDNPTNNSMSLREEHNYSLSIHELGPQEEENSEVSFEKSVTSNRQTCQVFLRLTLHSRGCFH
ACISYQNQPINNGEFDIIVLSENEKNIVERNVSTSGVSIYFEAYLYNANSYSSAPWHLPPMHMS
SSQRRPSTALEEEEEDSPSECHTPEKVKKPKKVYCYVSPKQFSVKEFYLKIIPWRLYTFRVCPG
TKFSYLGPDPVHKLLTLVVDDGIQPPVELSCKERNILAATFIRSLHKNIGGSETFQDKVNFFQR
ELRQVHMKRPHSKVTLKVSRHALLESSLKATRNFSISDWSKNFEVVFQDEEALDWGGPRREWFE
LICKALFDTTSQLFTRFSDNNQALVHPNPNRPAHLRLKMYEFAGRLVGKCLYESSLGGAYKQLV
RARFTRSFLAQIIGLRMHYKYFETDDPEFYKSKVCFILNNDMSEMELVFAEEKYNKSGQLDKIV
ELMTGGAQTPVTNANKTFYLNLLAQYRLASQVKEEVEHFLKGLNELVPENLLAIFDENELELLM
CGTGDISVSDFKAHAVVVGGSWHFREKVMRWFWTVVSSLTQEELARLLQFTTGSSQLPPGGFAA
LCPSFQIIAAPTHSTLPTAHTCFNQLCLPTYDSYEEVHRMLQLAISEGCEGFGML

hide sequence

RefSeq Acc Id:	XP_006240395 ⟸ XM_006240333
- Peptide Label:	isoform X1
- UniProtKB:	D3ZVC4 (UniProtKB/TrEMBL), A6JDZ1 (UniProtKB/TrEMBL)
- Sequence:	show sequence MFYVIGGIIVSVVAFFFTIKFLFELAARVVSFLQNEDRERRGDRTIYDYVRGNYLDPRSCKVSW DWKDPYEVGHSMAFRVHLFYKNGQPFPAHRPVGLRVHISHVELAVEIPVTQEVLQEPNSNVVKV AFTVRKAGRYEITVKLGGLNVAYSPYYKIFQPGMVVPSKTKIVCHFSTLVLTCGQPHTLQIVPR DEYDNPTNNSMSLREEHNYSLSIHELGPQEEENSEVSFEKSVTSNRQTCQVFLRLTLHSRGCFH ACISYQNQPINNGEFDIIVLSENEKNIVERNVSTSGVSIYFEAYLYNANSYSSAPWHLPPMHMS SSQRRPSTALEEEEEDSPSECHTPEKVKKPKKVYCYVSPKQFSVKEFYLKIIPWRLYTFRVCPG TKFSYLGPDPVHKLLTLVVDDGIQPPVELSCKERNILAATFIRSLHKNIGGSETFQDKVNFFQR ELRQVHMKRPHSKVTLKVSRHALLESSLKATRNFSISDWSKNFEVVFQDEEALDWGGPRREWFE LICKALFDTTSQLFTRFSDNNQALVHPNPNRPAHLRLKMYEFAGRLVGKCLYESSLGGAYKQLV RARFTRSFLAQIIGLRMHYKYFETDDPEFYKSKVCFILNNDMSEMELVFAEEKYNKSGQLDKIV ELMTGGAQTPVTNANKTFYLNLLAQYRLASQVKEEVEHFLKGLNELVPENLLAIFDENELELLM CGTGDISVSDFKAHAVVVGGSWHFREKVMRWFWTVVSSLTQEELARLLQFTTGSSQLPPGGFAA LCPSFQIIAAPTHSTLPTAHTCFNQLCLPTYDSYEEVHRMLQLAISEGCEGFGML hide sequence

RefSeq Acc Id:

XP_008762976 ⟸ XM_008764754

- Peptide Label:

isoform X1

- Sequence:

show sequence

MFYVIGGIIVSVVAFFFTIKFLFELAARVVSFLQNEDRERRGDRTIYDYVRGNYLDPRSCKVSW
DWKDPYEVGHSMAFRVHLFYKNGQPFPAHRPVGLRVHISHVELAVEIPVTQEVLQEPNSNVVKV
AFTVRKAGRYEITVKLGGLNVAYSPYYKIFQPGMVVPSKTKIVCHFSTLVLTCGQPHTLQIVPR
DEYDNPTNNSMSLREEHNYSLSIHELGPQEEENSEVSFEKSVTSNRQTCQVFLRLTLHSRGCFH
ACISYQNQPINNGEFDIIVLSENEKNIVERNVSTSGVSIYFEAYLYNANSYSSAPWHLPPMHMS
SSQRRPSTALEEEEEDSPSECHTPEKVKKPKKVYCYVSPKQFSVKEFYLKIIPWRLYTFRVCPG
TKFSYLGPDPVHKLLTLVVDDGIQPPVELSCKERNILAATFIRSLHKNIGGSETFQDKVNFFQR
ELRQVHMKRPHSKVTLKVSRHALLESSLKATRNFSISDWSKNFEVVFQDEEALDWGGPRREWFE
LICKALFDTTSQLFTRFSDNNQALVHPNPNRPAHLRLKMYEFAGRLVGKCLYESSLGGAYKQLV
RARFTRSFLAQIIGLRMHYKYFETDDPEFYKSKVCFILNNDMSEMELVFAEEKYNKSGQLDKIV
ELMTGGAQTPVTNANKTFYLNLLAQYRLASQVKEEVEHFLKGLNELVPENLLAIFDENELELLM
CGTGDISVSDFKAHAVVVGGSWHFREKVMRWFWTVVSSLTQEELARLLQFTTGSSQLPPGGFAA
LCPSFQIIAAPTHSTLPTAHTCFNQLCLPTYDSYEEVHRMLQLAISEGCEGFGML

hide sequence

RefSeq Acc Id:

XP_017449586 ⟸ XM_017594097

- Peptide Label:

isoform X2

- Sequence:

show sequence

MFYVIGGIIVSVVAFFFTIKFLFELAARVVSFLQNEDRERRGDRTIYDYVRGNYLDPRSCKVSW
DWKDPYELFYKNGQPFPAHRPVGLRVHISHVELAVEIPVTQEVLQEPNSNVVKVAFTVRKAGRY
EITVKLGGLNVAYSPYYKIFQPGMVVPSKTKIVCHFSTLVLTCGQPHTLQIVPRDEYDNPTNNS
MSLREEHNYSLSIHELGPQEEENSEVSFEKSVTSNRQTCQVFLRLTLHSRGCFHACISYQNQPI
NNGEFDIIVLSENEKNIVERNVSTSGVSIYFEAYLYNANSYSSAPWHLPPMHMSSSQRRPSTAL
EEEEEDSPSECHTPEKVKKPKKVYCYVSPKQFSVKEFYLKIIPWRLYTFRVCPGTKFSYLGPDP
VHKLLTLVVDDGIQPPVELSCKERNILAATFIRSLHKNIGGSETFQDKVNFFQRELRQVHMKRP
HSKVTLKVSRHALLESSLKATRNFSISDWSKNFEVVFQDEEALDWGGPRREWFELICKALFDTT
SQLFTRFSDNNQALVHPNPNRPAHLRLKMYEFAGRLVGKCLYESSLGGAYKQLVRARFTRSFLA
QIIGLRMHYKYFETDDPEFYKSKVCFILNNDMSEMELVFAEEKYNKSGQLDKIVELMTGGAQTP
VTNANKTFYLNLLAQYRLASQVKEEVEHFLKGLNELVPENLLAIFDENELELLMCGTGDISVSD
FKAHAVVVGGSWHFREKVMRWFWTVVSSLTQEELARLLQFTTGSSQLPPGGFAALCPSFQIIAA
PTHSTLPTAHTCFNQLCLPTYDSYEEVHRMLQLAISEGCEGFGML

hide sequence

Ensembl Acc Id:

ENSRNOP00000006240 ⟸ ENSRNOT00000006240

Ensembl Acc Id:

ENSRNOP00000074719 ⟸ ENSRNOT00000086545

RefSeq Acc Id:	XP_038967966 ⟸ XM_039112038
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038967965 ⟸ XM_039112037
- Peptide Label:	isoform X1
- UniProtKB:	D3ZVC4 (UniProtKB/TrEMBL), A6JDZ1 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038967967 ⟸ XM_039112039
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_063117813 ⟸ XM_063261743
- Peptide Label:	isoform X1
- UniProtKB:	A6JDZ1 (UniProtKB/TrEMBL), D3ZVC4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063117812 ⟸ XM_063261742
- Peptide Label:	isoform X1
- UniProtKB:	A6JDZ1 (UniProtKB/TrEMBL), D3ZVC4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063117814 ⟸ XM_063261744
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_063117810 ⟸ XM_063261740
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_063117815 ⟸ XM_063261745
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_063117816 ⟸ XM_063261746
- Peptide Label:	isoform X2

Protein Domains

HECT

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-D3ZVC4-F1-model_v2	AlphaFold	D3ZVC4	1-823	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13694743

Promoter ID:

EPDNEW_R5257

Type:

initiation region

Name:

Arel1_1

Description:

apoptosis resistant E3 ubiquitin protein ligase 1

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	6	108,796,090 - 108,796,150	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1307597	AgrOrtholog
BioCyc Gene	G2FUF-36805	BioCyc
Ensembl Genes	ENSRNOG00000004382	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000006240	ENTREZGENE
	ENSRNOT00000006240.8	UniProtKB/TrEMBL
Gene3D-CATH	2.60.40.10	UniProtKB/TrEMBL
	Hect, E3 ligase catalytic domain	UniProtKB/TrEMBL
	Hect, E3 ligase catalytic domain	UniProtKB/TrEMBL
	Hect, E3 ligase catalytic domains	UniProtKB/TrEMBL
InterPro	E3_ubiq-protein_ligase	UniProtKB/TrEMBL
	Filamin/ABP280_repeat-like	UniProtKB/TrEMBL
	HECT	UniProtKB/TrEMBL
	Hect_E3_ubiquitin_ligase	UniProtKB/TrEMBL
	Ig-like_fold	UniProtKB/TrEMBL
	Ig_E-set	UniProtKB/TrEMBL
KEGG Report	rno:299197	UniProtKB/TrEMBL
NCBI Gene	299197	ENTREZGENE
PANTHER	APOPTOSIS-RESISTANT E3 UBIQUITIN PROTEIN LIGASE 1	UniProtKB/TrEMBL
	HECT DOMAIN UBIQUITIN-PROTEIN LIGASE	UniProtKB/TrEMBL
Pfam	Filamin	UniProtKB/TrEMBL
	HECT	UniProtKB/TrEMBL
PhenoGen	Arel1	PhenoGen
PROSITE	FILAMIN_REPEAT	UniProtKB/TrEMBL
	HECT	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000004382	RatGTEx
SMART	HECTc	UniProtKB/TrEMBL
Superfamily-SCOP	HECT	UniProtKB/TrEMBL
	Ig_E-set	UniProtKB/TrEMBL
UniProt	A6JDZ1	ENTREZGENE, UniProtKB/TrEMBL
	D3ZVC4	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2013-04-25	Arel1	apoptosis resistant E3 ubiquitin protein ligase 1	RGD1307597	similar to mKIAA0317 protein	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-04-30	RGD1307597	similar to mKIAA0317 protein	RGD1307597_predicted	similar to mKIAA0317 protein (predicted)	'predicted' is removed	2292626	APPROVED
2005-01-20	RGD1307597_predicted	similar to mKIAA0317 protein (predicted)	LOC299197_predicted		Symbol and Name status set to approved	1331353	APPROVED
2005-01-12	LOC299197_predicted	similar to mKIAA0317 protein (predicted)			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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