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Gene: Jakmip3 (janus kinase and microtubule interacting protein 3) Rattus norvegicus

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Symbol:

Jakmip3

Name:

janus kinase and microtubule interacting protein 3

RGD ID:

1307177

Description:

Predicted to enable kinase binding activity and microtubule binding activity. Orthologous to human JAKMIP3 (Janus kinase and microtubule interacting protein 3); INTERACTS WITH 6-propyl-2-thiouracil; bisphenol A; cadmium dichloride.

Type:

protein-coding

RefSeq Status:

INFERRED

Previously known as:

hypothetical protein LOC680494; janus kinase and microtubule-interacting protein 3; LOC365380; Necc2; neuroendocrine long coiled-coil protein 2; RGD1307177; similar to Hypothetical protein KIAA0555

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	203,182,764 - 203,310,714 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	1	203,241,125 - 203,310,713 (+)	Ensembl				GRCr8
mRatBN7.2	1	193,753,134 - 193,881,105 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	193,811,513 - 193,881,104 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	1	202,181,878 - 202,251,466 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	209,316,715 - 209,386,257 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	201,990,201 - 202,059,739 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	1	211,292,604 - 211,421,023 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	211,351,350 - 211,421,022 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	1	218,219,463 - 218,347,772 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	1	198,793,647 - 198,864,034 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	1	191,501,095 - 191,570,038 (+)	NCBI		Celera
RGSC_v3.1	1	198,884,806 - 198,980,609 (+)	NCBI
Cytogenetic Map	1	q41	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dichloroethane (ISO)

4,4'-sulfonyldiphenol (ISO)

6-propyl-2-thiouracil (EXP)

aflatoxin B1 (ISO)

Aflatoxin B2 alpha (ISO)

amiodarone (ISO)

arsane (ISO)

arsenic atom (ISO)

benzene (ISO)

benzo[a]pyrene (ISO)

benzo[e]pyrene (ISO)

bisphenol A (EXP,ISO)

cadmium dichloride (EXP)

copper atom (EXP)

copper(0) (EXP)

diazinon (ISO)

fonofos (ISO)

genistein (EXP)

lead(0) (ISO)

melphalan (ISO)

methapyrilene (ISO)

mono(2-ethylhexyl) phthalate (ISO)

niclosamide (ISO)

okadaic acid (ISO)

parathion (ISO)

sodium arsenite (ISO)

sunitinib (ISO)

terbufos (ISO)

titanium dioxide (ISO)

trichloroethene (EXP)

triptonide (ISO)

valproic acid (EXP,ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Molecular Function

kinase binding (IEA)

microtubule binding (IEA)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
3.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:15632090	PMID:17572408	PMID:24040018

Genomics

Comparative Map Data

Jakmip3
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	203,182,764 - 203,310,714 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	1	203,241,125 - 203,310,713 (+)	Ensembl				GRCr8
mRatBN7.2	1	193,753,134 - 193,881,105 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	193,811,513 - 193,881,104 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	1	202,181,878 - 202,251,466 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	209,316,715 - 209,386,257 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	201,990,201 - 202,059,739 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	1	211,292,604 - 211,421,023 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	211,351,350 - 211,421,022 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	1	218,219,463 - 218,347,772 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	1	198,793,647 - 198,864,034 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	1	191,501,095 - 191,570,038 (+)	NCBI		Celera
RGSC_v3.1	1	198,884,806 - 198,980,609 (+)	NCBI
Cytogenetic Map	1	q41	NCBI

JAKMIP3
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	10	132,036,364 - 132,184,858 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	10	132,036,336 - 132,184,858 (+)	Ensembl			hg38	GRCh38
GRCh37	10	133,849,868 - 133,998,362 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	10	133,768,303 - 133,830,527 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	10	133,805,421 - 133,848,302	NCBI
Celera	10	127,562,508 - 127,643,434 (+)	NCBI		Celera
Cytogenetic Map	10	q26.3	NCBI
HuRef	10	127,467,260 - 127,550,043 (+)	NCBI		HuRef
CHM1_1	10	134,200,215 - 134,280,494 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	10	132,976,652 - 133,128,086 (+)	NCBI		T2T-CHM13v2.0

Jakmip3
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	7	138,542,057 - 138,663,893 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	7	138,542,459 - 138,663,892 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	7	138,940,730 - 139,083,976 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	7	138,940,730 - 139,083,977 (+)	Ensembl			mm10	GRCm38
MGSCv37	7	146,132,433 - 146,218,525 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv37	7	146,248,506 - 146,269,875 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	7	138,779,404 - 138,865,191 (+)	NCBI		MGSCv36	mm8
MGSCv36	12	8,386,377 - 8,534,544 (-)	NCBI		MGSCv36	mm8
Celera	7	138,757,548 - 138,879,325 (+)	NCBI		Celera
Cytogenetic Map	7	F4	NCBI
cM Map	7	83.0	NCBI

Jakmip3
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955477	9,680,798 - 9,807,420 (+)	Ensembl
ChiLan1.0	NW_004955477	9,681,239 - 9,827,704 (+)	NCBI	ChiLan1.0	ChiLan1.0

JAKMIP3
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	8	143,993,759 - 144,151,225 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	10	143,999,121 - 144,156,582 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	10	128,763,675 - 128,853,537 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	10	132,955,051 - 133,076,993 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	10	132,993,545 - 133,056,352 (+)	Ensembl			panPan2	panpan1.1

JAKMIP3
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	28	40,101,607 - 40,152,821 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	28	40,101,267 - 40,157,243 (+)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	28	40,137,990 - 40,235,392 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	28	40,718,565 - 40,816,531 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	28	40,718,549 - 40,803,055 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	28	40,227,416 - 40,300,462 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	28	40,191,250 - 40,288,347 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	28	40,590,251 - 40,687,628 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Jakmip3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024407213	6,979,693 - 7,079,767 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936486	18,509,166 - 18,567,463 (+)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936486	18,481,413 - 18,583,030 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

JAKMIP3
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	14	140,397,188 - 140,493,774 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	14	140,397,146 - 140,495,317 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	14	152,229,976 - 152,309,716 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

JAKMIP3
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	9	124,630,893 - 124,775,995 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	9	124,657,592 - 124,754,528 (+)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666048	86,142,523 - 86,221,646 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Jakmip3
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624737	14,643,770 - 14,744,107 (-)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624737	14,626,402 - 14,775,749 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Jakmip3
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	2	62,778,771 - 62,885,356 (-)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Jakmip3
1066 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	530
Count of miRNA genes:	251
Interacting mature miRNAs:	348
Transcripts:	ENSRNOT00000030461
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1578778	Pur4	Proteinuria QTL 4	3.3	0.003	urine total protein amount (VT:0000032)	urine total protein excretion rate (CMO:0000756)	1	160111531	262090437	Rat
1354646	Kidm18	Kidney mass QTL 18	5.7		kidney mass (VT:0002707)	calculated kidney weight (CMO:0000160)	1	160573753	266453731	Rat
1354652	Kidm20	Kidney mass QTL 20	4.3		kidney mass (VT:0002707)	calculated kidney weight (CMO:0000160)	1	186658830	266453731	Rat
1354653	Despr9	Despair related QTL 9		0.00019	locomotor behavior trait (VT:0001392)	amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)	1	177339686	222339686	Rat
2293673	Bss27	Bone structure and strength QTL 27	18.63	0.0001	femur morphology trait (VT:0000559)	femur midshaft cortical cross-sectional area (CMO:0001663)	1	181059071	226059071	Rat
2293677	Bss41	Bone structure and strength QTL 41	9.38	0.0001	lumbar vertebra size trait (VT:0010518)	lumbar vertebra cross-sectional area (CMO:0001689)	1	181059071	226059071	Rat
70160	Bw18	Body weight QTL 18	5.7		body mass (VT:0001259)	body weight (CMO:0000012)	1	153679879	205813246	Rat
1549830	Bss1	Bone structure and strength QTL 1	4.8		femur strength trait (VT:0010010)	femur ultimate force (CMO:0001675)	1	182039247	227039247	Rat
70163	Bw20	Body weight QTL 20	5.1		body mass (VT:0001259)	body weight (CMO:0000012)	1	183564652	228564652	Rat
1354624	Cm35	Cardiac mass QTL35	5.7		heart left ventricle mass (VT:0007031)	calculated heart weight (CMO:0000073)	1	186658830	266453731	Rat
1600397	Edcs4	Endometrial carcinoma susceptibility QTL 4	2.2		uterus morphology trait (VT:0001120)	percentage of study population developing endometrioid carcinoma during a period of time (CMO:0001759)	1	176288899	270518180	Rat
631838	Niddm36	Non-insulin dependent diabetes mellitus QTL 36		0.01	insulin secretion trait (VT:0003564)	calculated pancreatic islet insulin release measurement (CMO:0001217)	1	193964073	238964073	Rat
1354636	Lmblg1	Limb length QTL 1	6.4		tibia length (VT:0004357)	tibia length (CMO:0000450)	1	160573753	210707719	Rat
1549837	Hcar15	Hepatocarcinoma resistance QTL 15		0.05	liver integrity trait (VT:0010547)	liver tumorous lesion number (CMO:0001068)	1	162548015	270518180	Rat
2293689	Bss47	Bone structure and strength QTL 47	7.25	0.0001	lumbar vertebra size trait (VT:0010518)	lumbar vertebra trabecular cross-sectional area (CMO:0001692)	1	181059071	226059071	Rat
152025235	Bw194	Body weight QTL 194	4.86		body mass (VT:0001259)		1	132966869	252856240	Rat
61341	Bp26	Blood pressure QTL 26			arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	139442053	223964440	Rat
1598853	Memor3	Memory QTL 3	4.5		exploratory behavior trait (VT:0010471)	total horizontal distance resulting from voluntary locomotion in an experimental apparatus (CMO:0001443)	1	152919152	268496042	Rat
1354634	Kidm12	Kidney mass QTL 12	3.9		kidney mass (VT:0002707)	right kidney wet weight (CMO:0000082)	1	160573753	210707719	Rat
4889428	Stresp24	Stress response QTL 24		0.05	heart pumping trait (VT:2000009)	absolute change in electrocardiographic low frequency R-R spectral component to high frequency R-R spectral component ratio (CMO:0002162)	1	165278545	210278545	Rat
152025232	Bw192	Body weight QTL 192	3.93		body mass (VT:0001259)		1	127329268	206393015	Rat
1578759	Uae30	Urinary albumin excretion QTL 30	3.3	0.003	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	1	160111531	262090437	Rat
61343	Bp28	Blood pressure QTL 28			arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	161077990	206077990	Rat
2293693	Bss22	Bone structure and strength QTL 22	33.52	0.0001	femur morphology trait (VT:0000559)	femur cross-sectional area (CMO:0001661)	1	181059071	226059071	Rat
1358902	Bw47	Body weight QTL 47	1.67		body mass (VT:0001259)	body weight (CMO:0000012)	1	99645382	221502378	Rat
2300161	Bmd43	Bone mineral density QTL 43	8.4	0.0001	femur mineral mass (VT:0010011)	volumetric bone mineral density (CMO:0001553)	1	181059071	226059071	Rat
1300145	Rf7	Renal function QTL 7	2.96		urine creatinine amount (VT:0010540)	urine creatinine level (CMO:0000125)	1	194575422	239575422	Rat
61347	Bp197	Blood pressure QTL 197	4.2		arterial blood pressure trait (VT:2000000)	blood pressure measurement (CMO:0000003)	1	168063662	213063662	Rat
8655655	Arrd2	Age-related retinal degeneration QTL 2	7.79		retinal layer morphology trait (VT:0003727)	percentage of study population developing retinopathy during a period of time (CMO:0002453)	1	193400541	238400541	Rat
61348	Bp30	Blood pressure QTL 30	2.4		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	159894717	207261263	Rat
2303622	Vencon6	Ventilatory control QTL 6		0.001	respiration trait (VT:0001943)	respiration rate (CMO:0000289)	1	163992710	208992710	Rat
1358898	Bp255	Blood pressure QTL 255	3.6		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	1	200449456	256003563	Rat
631214	Bw61	Body weight QTL61	3.4	0.0001	intramuscular adipose amount (VT:0010044)	intramuscular fat area (CMO:0001162)	1	182535316	227535316	Rat
7771612	Cm80	Cardiac mass QTL 80	8.4		heart left ventricle mass (VT:0007031)	heart left ventricle weight (CMO:0000776)	1	146080545	243492863	Rat
731168	Bp154	Blood pressure QTL 154	3.4		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	103779152	223964440	Rat
631205	Bp196	Blood pressure QTL 196	4	0.0001	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	1	98879955	208479939	Rat
2300174	Bmd42	Bone mineral density QTL 42	8.4	0.0001	lumbar vertebra mineral mass (VT:0010511)	bone mineral density (CMO:0001226)	1	181059071	226059071	Rat
737828	Hcas3	Hepatocarcinoma susceptibility QTL 3	4.9		liver integrity trait (VT:0010547)	liver tumorous lesion volume to total liver volume ratio (CMO:0001082)	1	153679879	232414077	Rat
1354661	Bw33	Body weight QTL 33	5.2		body mass (VT:0001259)	body weight (CMO:0000012)	1	160573753	266453731	Rat
1358886	Bp260	Blood pressure QTL 260	3.67		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	1	160574007	235238518	Rat
2293654	Bss30	Bone structure and strength QTL 30	32.65	0.0001	femur strength trait (VT:0010010)	femur midshaft polar moment of inertia (CMO:0001669)	1	181059071	226059071	Rat
724531	Uae5	Urinary albumin excretion QTL 5	4		urine albumin amount (VT:0002871)	urine albumin level (CMO:0000130)	1	160111426	262090599	Rat
2300187	Bmd41	Bone mineral density QTL 41	8.9	0.0001	femur mineral mass (VT:0010011)	volumetric bone mineral density (CMO:0001553)	1	181059071	226059071	Rat
8552891	Epfw5	Epididymal fat weight QTL 5	4.4		epididymal fat pad mass (VT:0010421)	epididymal fat pad weight to body weight ratio (CMO:0000658)	1	202543537	247543537	Rat
1359018	Hrtrt20	Heart rate QTL 20	3.08		heart pumping trait (VT:2000009)	heart rate (CMO:0000002)	1	194786607	207590403	Rat
1354580	Scort1	Serum corticosterone level QTL 1	3.4		blood corticosterone amount (VT:0005345)	blood corticosterone level (CMO:0001172)	1	154961463	266453731	Rat
70209	Niddm23	Non-insulin dependent diabetes mellitus QTL 23	2.82		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	1	162753891	207753891	Rat
634312	Bp143	Blood pressure QTL 143	3	0.0002	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	203300512	229359342	Rat
1358294	Bw37	Body weight QTL 37	5	0.000011	body mass (VT:0001259)	body weight (CMO:0000012)	1	180739993	225739993	Rat
61378	Bp43	Blood pressure QTL 43	22.6		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	191177449	205813246	Rat
634314	Niddm44	Non-insulin dependent diabetes mellitus QTL 44			blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	1	51941022	208479811	Rat
724559	Pancm1	Pancreatic morphology QTL 1	7.1		islet of Langerhans morphology trait (VT:0005215)	pancreatic islet damage composite score (CMO:0001156)	1	191190115	223964326	Rat
2312420	Pur17	Proteinuria QTL 17	7.1	0.0001	urine protein amount (VT:0005160)	urine total protein excretion rate (CMO:0000756)	1	172718770	228180370	Rat
10059600	Bp378	Blood pressure QTL 378	3.08	0.05	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	186298393	231298393	Rat
1354591	Cm36	Cardiac mass QTL 36	4.1		heart left ventricle mass (VT:0007031)	calculated heart weight (CMO:0000073)	1	111949780	210707719	Rat
10059597	Bp377	Blood pressure QTL 377	3.42	0.025	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	34565911	208798288	Rat
631260	Tcas2	Tongue tumor susceptibility QTL 2	4.93		tongue integrity trait (VT:0010553)	number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)	1	201915593	208479939	Rat
619614	Bp78	Blood pressure QTL 78		0.001	arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	1	178547286	206690557	Rat
2312564	Glom18	Glomerulus QTL 18	2.4	0.003	kidney glomerulus morphology trait (VT:0005325)	index of glomerular damage (CMO:0001135)	1	194786607	262083703	Rat
634321	Hc1	Hypercalciuria QTL 1	2.91		urine calcium amount (VT:0002985)	urine calcium excretion rate (CMO:0000763)	1	188241285	250779312	Rat
724562	Rends1	Renal damage susceptibility QTL 1		0.05	kidney glomerulus integrity trait (VT:0010546)	index of glomerular damage (CMO:0001135)	1	139442053	223964440	Rat
1300168	Bp170	Blood pressure QTL 170	2.76		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	1	192995199	237995199	Rat
61403	Niddm4	Non-insulin dependent diabetes mellitus QTL 4			blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	1	201464383	246464383	Rat
2292222	Bp307	Blood pressure QTL 307	3.06	0.0014	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	186298393	231298393	Rat
2292220	Bp306	Blood pressure QTL 306	3.47	0.00087	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	186298393	231298393	Rat
1354615	Cm32	Cardiac mass QTL 32	5.2		heart left ventricle mass (VT:0007031)	heart left ventricle wet weight (CMO:0000071)	1	111949780	210707719	Rat
1600380	Niddm70	Non-insulin dependent diabetes mellitus QTL 70	3.1	0.0008	blood insulin amount (VT:0001560)	plasma insulin level (CMO:0000342)	1	185979875	230979875	Rat
1354610	Bw34	Body weight QTL 34	4.1		body mass (VT:0001259)	body weight (CMO:0000012)	1	160573753	266453731	Rat
1582206	Kidm33	Kidney mass QTL 33	6.9		kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	1	197807365	233480676	Rat
1354620	Kidm19	Kidney mass QTL 19	4		kidney mass (VT:0002707)	calculated kidney weight (CMO:0000160)	1	160573753	210707719	Rat
8655855	Arrd3	Age-related retinal degeneration QTL 3	3.07		lens clarity trait (VT:0001304)	cataract incidence/prevalence measurement (CMO:0001585)	1	193400541	238400541	Rat
634338	Hcar4	Hepatocarcinoma resistance QTL 4	4.6		liver integrity trait (VT:0010547)	liver tumorous lesion number to liver area ratio (CMO:0001210)	1	202851915	223964440	Rat
6480783	Insul19	Insulin level QTL 19	4.33		blood insulin amount (VT:0001560)	plasma insulin level (CMO:0000342)	1	203300512	213659238	Rat
1354618	Kidm15	Kidney mass QTL 15	5		kidney mass (VT:0002707)	left kidney wet weight (CMO:0000083)	1	165707719	210707719	Rat
6903303	Scl34	Serum cholesterol QTL 34	2.5	0.0033	blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	1	173363824	227535316	Rat
6480780	Insul18	Insulin level QTL 18	4.11		blood insulin amount (VT:0001560)	plasma insulin level (CMO:0000342)	1	203300512	205777982	Rat
152025212	Bw190	Body weight QTL 190	5.7		body mass (VT:0001259)		1	132966869	206393015	Rat
2293083	Iddm25	Insulin dependent diabetes mellitus QTL 25	4.18		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	1	191260175	236260175	Rat
1354606	Bp246	Blood pressure QTL 246	3.6		arterial blood pressure trait (VT:2000000)	pulse pressure (CMO:0000292)	1	111949780	228180370	Rat
738032	Hcas5	Hepatocarcinoma susceptibility QTL 5	3.12		liver integrity trait (VT:0010547)	liver tumorous lesion number (CMO:0001068)	1	185857683	270518180	Rat
2325727	Pia41	Pristane induced arthritis QTL 41			joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	1	188241285	233241285	Rat
1354602	Bw35	Body weight QTL 35	12.2		body mass (VT:0001259)	body weight (CMO:0000012)	1	160573753	210707719	Rat
631670	Iddm10	Insulin dependent diabetes mellitus QTL 10	1.9		blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	1	183564652	205813246	Rat

Markers in Region

D1Rat159

Rat Assembly	Chr	Position (strand)	Source	JBrowse
GRCr8	1	203,239,897 - 203,240,090 (+)	Marker Load Pipeline
mRatBN7.2	1	193,810,285 - 193,810,478 (+)	MAPPER	mRatBN7.2
Rnor_6.0	1	211,350,207 - 211,350,399	NCBI	Rnor6.0
Rnor_5.0	1	218,276,626 - 218,276,818	UniSTS	Rnor5.0
RGSC_v3.4	1	198,792,419 - 198,792,612	RGD	RGSC3.4
RGSC_v3.4	1	198,792,420 - 198,792,612	UniSTS	RGSC3.4
Celera	1	191,499,868 - 191,500,060	UniSTS
RGSC_v3.1	1	198,942,412 - 198,942,604	RGD
RH 3.4 Map	1	1435.49	RGD
RH 3.4 Map	1	1435.49	UniSTS
RH 2.0 Map	1	1050.6	RGD
SHRSP x BN Map	1	101.4699	RGD
FHH x ACI Map	1	93.28	RGD
Cytogenetic Map	1	q41	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
11	4	21	151	31	30	5	9	5	6	116	59	10	126	38	73	25	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001163277	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017589493	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017589494	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017589495	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017589496	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017589497	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017589498	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063269552	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063269553	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063269554	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063269555	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063269557	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063269558	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063269559	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063269560	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063269562	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063269564	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063269565	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063269566	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063269570	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063269575	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063269577	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063269581	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063269582	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063269585	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063269586	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063269588	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063269590	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063269594	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063269596	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063269605	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063269608	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063269612	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063269614	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063269616	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063269617	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063269620	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063269621	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063269624	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063269627	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063269631	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063269632	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063269634	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063269635	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063269636	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063269638	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063269647	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063269650	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063269652	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063269655	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063269658	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063269659	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063269662	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063269663	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063269664	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063269665	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063269669	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC131400	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473953	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000001	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000030461 ⟹ ENSRNOP00000035987

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	1	203,241,125 - 203,310,713 (+)	Ensembl
mRatBN7.2 Ensembl	1	193,811,513 - 193,881,104 (+)	Ensembl
Rnor_6.0 Ensembl	1	211,351,434 - 211,421,022 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000082751 ⟹ ENSRNOP00000072843

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	1	203,241,125 - 203,290,857 (+)	Ensembl
mRatBN7.2 Ensembl	1	193,811,513 - 193,861,244 (+)	Ensembl
Rnor_6.0 Ensembl	1	211,351,350 - 211,402,636 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000097687 ⟹ ENSRNOP00000085191

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	1	203,241,125 - 203,310,713 (+)	Ensembl
mRatBN7.2 Ensembl	1	193,811,513 - 193,881,104 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000142654 ⟹ ENSRNOP00000103657

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	1	203,241,125 - 203,310,713 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000164586 ⟹ ENSRNOP00000100236

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	1	203,241,125 - 203,293,617 (+)	Ensembl

RefSeq Acc Id:

NM_001163277 ⟹ NP_001156749

RefSeq Status:

INFERRED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	203,241,125 - 203,310,713 (+)	NCBI
mRatBN7.2	1	193,811,513 - 193,881,104 (+)	NCBI
Rnor_6.0	1	211,351,434 - 211,421,022 (+)	NCBI
Rnor_5.0	1	218,219,463 - 218,347,772 (+)	NCBI
RGSC_v3.4	1	198,793,647 - 198,864,034 (+)	RGD
Celera	1	191,501,095 - 191,570,038 (+)	RGD

Sequence:

show sequence

GTGACTGAGAAGATGTAGCGGAGTGACACCTGCCAAGAGCTTGGCGTGGATACCCTGGCCCAGC
CGGAGCAGCTGCCCCTGGGCGTCTTTCTGGCCATCCAGCCTCACCATGTCAAAGAAGGGTGCAG
GCAGCCGGGCCAAGGGGGACAAAGCAGAGACACTCGCTGCATTGCAGGCTGCCAACGAGGAGCT
GCGAGCCAAGCTCACGGACATCCAGATCGAGCTGCAGCAGGAGAAGAGCAAGGTCAGCAAAGTT
GAGCGGGAGAAGAGCCAGGAGCTAAAGCAGGTACGTGAGCACGAGCAGCGTAAGCACGCCGTCC
TGGTCACGGAGCTCAAGACCAAGCTGCACGAGGAGAAGATGAAGGAGCTGCAGGCCGTGCGGGA
GGCGCTGTTGCGGCAGCACGAGGCCGAGCTGCTGAGGGTCATCAAGATTAAGGACAATGAGAAC
CAGCGGCTGCAGGCCTTGCTCAACACCCTGCGGGATGGCGCGCCCGACAAGGTGAAGACCGTGC
TCCTGTGCGAGGCAAAGGAGGAGGCCAAGAAGGGGTTTGAGGTGGAGAAGGTCAAGATGCAGCA
AGAGATCTCAGAGCTCAAGGGGGCCAAGAAGCAGGTGGAGGAGGCATTGACCATGGTCATCCAG
GCCGACAAGATCAAGGCTGCGGAGATCAGGAGTGTCTACCATCTGCACCAGGAAGAAATCACCC
GGATCAAGAAGGAGTGTGAGCGTGAGATCCGCAGGCTGATGGAGGAGATAAGATTTAAAGACAG
AGCAGTCTTCGTGCTGGAAAGAGAGTTAGGGGTTCAAGCCGGGCATGCCCAGAGACTGCAGCTC
CAGAAAGAGGCTCTAGATGAGCAGCTTTCCCAGGCCAAAGAGGCTGAGCGGCACCCAGGCAGCC
CCAGACGGGAACTTCCTTATGCAAGCGGTGCAGGAGACGCCTCAGACCACTCAGGAAGCCCTGA
ACAGCAGTTGGACGAAAAGGACGCCAGGCGCTTCCAACTTAAAATCGCGGAGTTAAGTGCCATC
ATCCGTAAGCTGGAAGACCGCAACGCCTTGCTGTCTGAAGAGAGGAATGAGCTGCTAAAGCGGC
TGAGAGAAGCTGAAAGCCAGTACAAGCCGTTGCTGGATAAGAACAAGCGCCTTACTCGGAAAAA
TGAAGACTTGTCTCACACCCTGCGGCGCATAGAGAGCAAGTTGAAATTTGTCACTCAGGAGAAC
ATAGAAATGAGGCAGAGAGCAGGGATCATCCGGAGACCCAGCTCCTTAAATGACCTTGATCAAA
GTCAAGATGAGAGAGAGATTGACTTCCTAAAGCTCCAGATTGTGGAGCAGCAGAACCTCATTGA
TGAGCTTTCTAAGACCCTGGAGACAGCAGGCTATGTGAAGAGTGTGTTGGAGCGTGATAAGCTG
TTGAGGTATCGGAAACAAAGAAAGAAAATGGCGAAGCTCCCCAAGCCAGTTGTCGTGGAGACCT
TCTTTGGATATGATGAAGAAGCTTCCCTGGAGTCCGATGGATCTTCCATTTCTTATCAAACTGA
CAGGACGGATCAGACCCCATGCACCCCCGAAGATGACCTAGAAGAGGGTATGGCCAAGGAGGAG
ACCGAGCTGAGGTTCCGGCAGCTGACCATGGAGTACCAGGCATTGCAGCGAGCCTACGCCTTGC
TGCAGGAACAAGTTGGAGGGACCCTGGATGCAGAGCGAGAAGTTAAGACCCGTGAGCAGCTGCA
AGCAGAAATACAGAGAGCACAGACACGGGTGGAGGACCTGGAAAAGGCTCTGGCTGAGCAGGGG
CAGGATATGAAGTGGATCGAAGAGAAGCAAGCATTGTATCGACGGAATCAAGAGCTTGTAGAAA
AGATAAAACAAATGGAGACGGAGGAGGCGCGGCTGAAGCATGAGGTCCAGGATGCAAAAGACCA
GAATGAGCTGTTGGAATTCAGGATCCTGGAGCTCGAGGAGAGAGAGAGGAAGTCCCCAGCCATC
AACTTCCACCATACTCCTTTTGTGGATGGGAAGAGCCCCCTGCAGGTGTATTGTGAGGCTGAAG
GTGTAACGGACATCCTGGTCACAGAGCTGATGAAGAAGCTGGATATCCTGGGGGATAACGCCAA
TCTGACCAATGAGGAACAAGTGGTTGTCATTCAAGCCAGGACAGTCCTGACCTTGGCAGAAAAG
TGGCTCCAGAGGATTGAAGAGACGGAGTCAGCACTACAGCGGAAAATGGTAGATCTGGAGAGCG
AGAAGGAGCTGTTCAGTAAGCAGAAAGGCTACCTGGATGAGGAGCTGGATTACAGGAAGCAAGC
CCTGGACCAAGCCCACAAGCACATCCTGGAGCTGGAAGCCATGTTGTATGATGCCCTGCAACAG
GAGGCCGGGGCCAAAGTGGCCGAGCTGCTGTCGGAAGAAGAGCGTGAGAAGCTCAAGGTGGCCG
TGGAGCAGTGGAAGCGTCAGGTCATGAGCGAGCTGCGAGAGCGAGATGCACAGATCCTGAGAGA
GCGCATGGAGCTGCTACAGATTGCACAGCAGAGAATTAAGGAGTTAGAAGAAAGAATAGAAACC
CAGAAGAGACAAATAAAGGAGCTGGAAGAAAAGTTTTTATTTTTGTTCTTGTTTTTCTCCCTAG
CTTTCATTCTCTGGTCATAGCTGTTCTTGGCACCCTGAACTGCCCTCTGCGAAGGCGAAGGTGG
ACCTTTGTCCTCTAACGGGACCAGAGAGCAGCAGGTGCCAGAGAAAGTGTGGGAAATTGCATTT
CAACACTGAAGACTCGGGAGTGTTCAGGCTCTGCGCCCCGCCTTGTGGAGGATGAGGGCAAAAA
CACTGTGGCCTGCAGCCACTGTCCACTTGGGGTGAGCCAGGACTAGAACTGGTCTTGCTGGCTA
GCGCTTCTCTAAGAGAAGTCTAGCTTTGGCTGCTGGTGACTTTCAGCCCAGAAAGTAGGCCCTG
CCCCAATCACAGCAATGTGTAATGTTTGTTCCCTGCCATGCAGGGGTAAGGATTGCTCCGCCAG
TGGAGCGATGGAGCCCACGCTGGACACACCCCTCGTTCCCATAGTGACCATCAGTACTCTTGGA
AGAAGATCTCAGAATGCCCAGACTTGCCCCTAATGGCAAGATGAAGGCTGTGGTCTCAGGGGTG
ACCCTGAGTGTCACCCTGTAGTGACACTCACTATGGTCCTGAGCACTTGCTGCTGGACACATCC
CATGCCCAACCTTGTTCTGTTACATTGGCATCTCTGTGAGGACAGATAGAGTCATGACTTCCCG
CTGGCCTACCCTACTCCCAGACACAAAGGCTAGAATCCTATCCCCAGCTGCTGGCCAGGAACAC
AGTGGAAAGATCAGAGAAGAGGCCAGGGAGCACATGGGATGAGTACACAGAGGCCTGGCCTTGA
AGAATGTGGATCAAAGCACAGCCAAAATACGGTGGAGTTGTGGCCCTCCTAGCCTAGAAGACCC
TCAGCAGATGAGCCTCGCCTGAGAGCCTCATGTGACAAGGGCCAGTGATGAAGGTAGCTTAAGA
TGGCTTCGTCCACAGCCTGTGCACATAAGAAAGGGTCCAGAAGAGAAGATGAACCTAAGGGTCC
ATGAACTTCGGATGGTAGCCACAGTGCAGTGGCCTACAGAGAGAAAGCAGTACAGCTATGAGGA
CGGTTCAAATGAGGCTTCCATCGTGCTAGATGGTACATCCAGCATCCAGGAAAGTCCTCCCTTG
TGTGGACCGGATGCATCCTTGTTGAAGGAGGCTCTTTCGCCCCCTTCACATCCCTGCTAGTCTA
AGATTGTCACCCTCTGTGCTGAAATTAGGAGGGCATGCATGTGCATGTGTGTCCATGTGTGAGC
TTGCTCAATGAGAAGTCAGTGCCTGGATTAGAGCCCTTTCAAAGCACCTAGAAGTTGACACACC
GGATAGTGAGATATGCAGTCAGGTGTGACCATTACATCCAGCATTGTATATTACAAAGCCCAGT
GGCCAGGGGGAGGAACGAGAGTGCTGTCTGAAAGCATTAGGTTCAATTTATATTTGTGTCAGGA
GAAATGTTCCACTGTGGTGCAGATGACCAAGTAGTTATGGACCCCTAGGTCAAAATCAGAGAAA
AGCTTACAGGATTGGACACATGGGCCCCTTTCTTCAGTGGCTCCAGGATTTCTGCTAGGAAATG
CATTCAGTGCTCTTGGTCCTTCCCATTGGCCATCCATGCCCAGTCATCGATTCTCTAACTGAGT
CTGATGTTGGGTTTGGTCTTTGAGTCTGAAATTTTTAGTCCTTAGTGCATGGTCTCCTCTTATT
TAAATGACTTCCTTCTCTCAGCCCATTTGCTGTACTCTCTGAATGGCAGCAATAGGCTGTGTCA
GTGATGCTGCCACAGATCTGTAGGTGAGGGGAAGCCACTGGGTTAGTGACCATTGGACTGTGCA
ATGCAGGGACCTCGGAGCTGTCTCAGGTCCATGCTGCTCTCTGCCCGCCAGCACTCCTGGCCCA
GCCCCAGGTGAACTTGCAAGAGAACAGGAGCTCATTAGGAACAAAAAGTTACACTGGAAACTCA
CCCCACCTCATACCCCTAGAGTTCAATTGGATCGTGGGTCTGCATGTTGTTCGCGTGTCCGGAA
TACTTCATAATACCCCCTGACACTCTAAATTACAGGTCTGGGAACTTTGTTGTTTTTAAGAATG
GCTCTACAGGAAAGAAAAGCATGTAAATAAGTACCAACGCTCATTAAGTCGTTTCTGTTTATGT
GTAAAGTATATGTACATAGAAAGGAAAATGGCTGAGTGAATGCTCGATAACATCCCACAAACCA
GACGGCACTTTCACCCAGCTGTATTCCTGAAAGCACACGCTGAGCCGGAAGGCTGTTCCTCTCC
TTTAGGCTTCATCGTTTTTATCCATGTCATAAGCACCATCTTGTCACCTGATCCCAAAGTCAGA
CCTGAACTCGGGGCAGGCGTGGGGGAGCAAATGTGAACCTCTGTTACCGATTCTTGCTGCCAAT
GAGCCTCTGAGGAGCTCAAGCACTTCAAAACGCAAGGTGCATTTTCTAAATCCCAGACTGAATC
TTCTATCCCAGATGCTGGGTTGGACAGGATTCCCTCCTACGTTTGAGCCCCTGCTGCTATCTCC
TAAAACAGGGCATCTGTGTGCAATGGCACTGCCCTGGTGAAGCAAGAAGAGGGACCCTGACATG
GCCCCCAGGGACTCAAACTGTACCACTGAGGCATGGGCCTCGGCTTCACATTGCGATGAATTGT
CAGCCCGCCCACTCTGTGTGCACGACATGGAATAGCATAAGTATTTCCGTTTGTCTAAACTAGA
AATCCACGTAAACTGCAGAGCCCTTTGTGAGCAGCCCTGTGGTGTCTACTTTGTTTCCATGGTC
TAGTGTTCTGTTGCTTGAAGGCCTATGGCTGTGATGGAAGTCTTTGCCCTTGTAGACTCTGTAG
CCTTCAGGAAACCTGAGTGCCTTACGCAGCTTGTCAACACCAACTGGGAGTCAGGAGGGAGGGT
GGAGAGTGGCTCTGTGGCACACTGATAGCTGATCAGTTCTTGCCATCACTCCGTCATTGAACCC
TTAAGTTGGGGTTGTGTGTTAAAACACAGTGATGGATCTAAGTTTAGGCTCAGGAAAACCATAT
TGTGAATATATGTATCAAGGCATATATTTATTGTACCTTTTCTAAAAAAGCTTTACTGTAAACT
TATGCAAAAAGGAGCAGAACTTTGCTTCTGGTGGCAGAGTGCCAGGCAGTATTTGTGTTTGACG
AAGCGATCTTTAACATGCCCCTCTCAACACGCAACCTTTCCGTTCAGTGCTCAACAGTATTCCC
AGGCTTCAACTAGGTTTGTATCGTGGTCAATTATAAATTTTACACATATTTTTGTATTGTGGTT
CCTATAATATATACCAGAGAATTTTTACTTATTTGTAAATTACTGTACAGTTTTAATAAAACTT
GTTTTAAATCCT

hide sequence

RefSeq Acc Id:

XM_063269552 ⟹ XP_063125622

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	203,183,621 - 203,292,654 (+)	NCBI

RefSeq Acc Id:

XM_063269553 ⟹ XP_063125623

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	203,183,101 - 203,292,654 (+)	NCBI

RefSeq Acc Id:

XM_063269554 ⟹ XP_063125624

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	203,182,768 - 203,292,654 (+)	NCBI

RefSeq Acc Id:

XM_063269555 ⟹ XP_063125625

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	203,183,081 - 203,292,654 (+)	NCBI

RefSeq Acc Id:

XM_063269557 ⟹ XP_063125627

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	203,182,764 - 203,292,654 (+)	NCBI

RefSeq Acc Id:

XM_063269558 ⟹ XP_063125628

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	203,183,081 - 203,292,654 (+)	NCBI

RefSeq Acc Id:

XM_063269559 ⟹ XP_063125629

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	203,183,081 - 203,292,654 (+)	NCBI

RefSeq Acc Id:

XM_063269560 ⟹ XP_063125630

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	203,183,621 - 203,292,654 (+)	NCBI

RefSeq Acc Id:

XM_063269562 ⟹ XP_063125632

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	203,183,621 - 203,292,654 (+)	NCBI

RefSeq Acc Id:

XM_063269564 ⟹ XP_063125634

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	203,182,790 - 203,292,654 (+)	NCBI

RefSeq Acc Id:

XM_063269565 ⟹ XP_063125635

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	203,183,081 - 203,292,654 (+)	NCBI

RefSeq Acc Id:

XM_063269566 ⟹ XP_063125636

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	203,183,621 - 203,292,654 (+)	NCBI

RefSeq Acc Id:

XM_063269570 ⟹ XP_063125640

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	203,183,081 - 203,292,654 (+)	NCBI

RefSeq Acc Id:

XM_063269575 ⟹ XP_063125645

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	203,183,081 - 203,292,654 (+)	NCBI

RefSeq Acc Id:

XM_063269577 ⟹ XP_063125647

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	203,182,764 - 203,292,654 (+)	NCBI

RefSeq Acc Id:

XM_063269581 ⟹ XP_063125651

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	203,182,778 - 203,292,654 (+)	NCBI

RefSeq Acc Id:

XM_063269582 ⟹ XP_063125652

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	203,183,621 - 203,292,654 (+)	NCBI

RefSeq Acc Id:

XM_063269585 ⟹ XP_063125655

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	203,182,768 - 203,292,654 (+)	NCBI

RefSeq Acc Id:

XM_063269586 ⟹ XP_063125656

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	203,183,621 - 203,292,654 (+)	NCBI

RefSeq Acc Id:

XM_063269588 ⟹ XP_063125658

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	203,183,621 - 203,292,654 (+)	NCBI

RefSeq Acc Id:

XM_063269590 ⟹ XP_063125660

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	203,183,621 - 203,292,654 (+)	NCBI

RefSeq Acc Id:

XM_063269594 ⟹ XP_063125664

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	203,183,621 - 203,292,654 (+)	NCBI

RefSeq Acc Id:

XM_063269596 ⟹ XP_063125666

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	203,183,621 - 203,292,654 (+)	NCBI

RefSeq Acc Id:

XM_063269605 ⟹ XP_063125675

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	203,183,621 - 203,310,714 (+)	NCBI

RefSeq Acc Id:

XM_063269608 ⟹ XP_063125678

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	203,183,621 - 203,292,797 (+)	NCBI

RefSeq Acc Id:

XM_063269612 ⟹ XP_063125682

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	203,183,621 - 203,292,797 (+)	NCBI

RefSeq Acc Id:

XM_063269614 ⟹ XP_063125684

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	203,183,621 - 203,292,797 (+)	NCBI

RefSeq Acc Id:

XM_063269616 ⟹ XP_063125686

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	203,183,621 - 203,292,797 (+)	NCBI

RefSeq Acc Id:

XM_063269617 ⟹ XP_063125687

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	203,183,621 - 203,292,654 (+)	NCBI

RefSeq Acc Id:

XM_063269620 ⟹ XP_063125690

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	203,183,102 - 203,292,654 (+)	NCBI

RefSeq Acc Id:

XM_063269621 ⟹ XP_063125691

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	203,182,768 - 203,292,654 (+)	NCBI

RefSeq Acc Id:

XM_063269624 ⟹ XP_063125694

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	203,182,769 - 203,292,654 (+)	NCBI

RefSeq Acc Id:

XM_063269627 ⟹ XP_063125697

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	203,183,621 - 203,292,654 (+)	NCBI

RefSeq Acc Id:

XM_063269631 ⟹ XP_063125701

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	203,182,768 - 203,292,654 (+)	NCBI

RefSeq Acc Id:

XM_063269632 ⟹ XP_063125702

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	203,183,621 - 203,292,654 (+)	NCBI

RefSeq Acc Id:

XM_063269634 ⟹ XP_063125704

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	203,183,104 - 203,292,654 (+)	NCBI

RefSeq Acc Id:

XM_063269635 ⟹ XP_063125705

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	203,183,621 - 203,292,654 (+)	NCBI

RefSeq Acc Id:

XM_063269636 ⟹ XP_063125706

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	203,183,103 - 203,292,654 (+)	NCBI

RefSeq Acc Id:

XM_063269638 ⟹ XP_063125708

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	203,183,101 - 203,292,654 (+)	NCBI

RefSeq Acc Id:

XM_063269647 ⟹ XP_063125717

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	203,183,621 - 203,292,797 (+)	NCBI

RefSeq Acc Id:

XM_063269650 ⟹ XP_063125720

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	203,183,621 - 203,292,654 (+)	NCBI

RefSeq Acc Id:

XM_063269652 ⟹ XP_063125722

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	203,183,621 - 203,292,654 (+)	NCBI

RefSeq Acc Id:

XM_063269655 ⟹ XP_063125725

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	203,183,102 - 203,292,654 (+)	NCBI

RefSeq Acc Id:

XM_063269658 ⟹ XP_063125728

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	203,183,102 - 203,292,654 (+)	NCBI

RefSeq Acc Id:

XM_063269659 ⟹ XP_063125729

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	203,183,103 - 203,292,654 (+)	NCBI

RefSeq Acc Id:

XM_063269662 ⟹ XP_063125732

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	203,183,621 - 203,292,654 (+)	NCBI

RefSeq Acc Id:

XM_063269663 ⟹ XP_063125733

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	203,183,621 - 203,292,797 (+)	NCBI

RefSeq Acc Id:

XM_063269664 ⟹ XP_063125734

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	203,183,621 - 203,292,797 (+)	NCBI

RefSeq Acc Id:

XM_063269665 ⟹ XP_063125735

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	203,183,621 - 203,292,797 (+)	NCBI

RefSeq Acc Id:

XM_063269669 ⟹ XP_063125739

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	203,183,621 - 203,292,797 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001156749	(Get FASTA)	NCBI Sequence Viewer
	XP_063125622	(Get FASTA)	NCBI Sequence Viewer
	XP_063125623	(Get FASTA)	NCBI Sequence Viewer
	XP_063125624	(Get FASTA)	NCBI Sequence Viewer
	XP_063125625	(Get FASTA)	NCBI Sequence Viewer
	XP_063125627	(Get FASTA)	NCBI Sequence Viewer
	XP_063125628	(Get FASTA)	NCBI Sequence Viewer
	XP_063125629	(Get FASTA)	NCBI Sequence Viewer
	XP_063125630	(Get FASTA)	NCBI Sequence Viewer
	XP_063125632	(Get FASTA)	NCBI Sequence Viewer
	XP_063125634	(Get FASTA)	NCBI Sequence Viewer
	XP_063125635	(Get FASTA)	NCBI Sequence Viewer
	XP_063125636	(Get FASTA)	NCBI Sequence Viewer
	XP_063125640	(Get FASTA)	NCBI Sequence Viewer
	XP_063125645	(Get FASTA)	NCBI Sequence Viewer
	XP_063125647	(Get FASTA)	NCBI Sequence Viewer
	XP_063125651	(Get FASTA)	NCBI Sequence Viewer
	XP_063125652	(Get FASTA)	NCBI Sequence Viewer
	XP_063125655	(Get FASTA)	NCBI Sequence Viewer
	XP_063125656	(Get FASTA)	NCBI Sequence Viewer
	XP_063125658	(Get FASTA)	NCBI Sequence Viewer
	XP_063125660	(Get FASTA)	NCBI Sequence Viewer
	XP_063125664	(Get FASTA)	NCBI Sequence Viewer
	XP_063125666	(Get FASTA)	NCBI Sequence Viewer
	XP_063125675	(Get FASTA)	NCBI Sequence Viewer
	XP_063125678	(Get FASTA)	NCBI Sequence Viewer
	XP_063125682	(Get FASTA)	NCBI Sequence Viewer
	XP_063125684	(Get FASTA)	NCBI Sequence Viewer
	XP_063125686	(Get FASTA)	NCBI Sequence Viewer
	XP_063125687	(Get FASTA)	NCBI Sequence Viewer
	XP_063125690	(Get FASTA)	NCBI Sequence Viewer
	XP_063125691	(Get FASTA)	NCBI Sequence Viewer
	XP_063125694	(Get FASTA)	NCBI Sequence Viewer
	XP_063125697	(Get FASTA)	NCBI Sequence Viewer
	XP_063125701	(Get FASTA)	NCBI Sequence Viewer
	XP_063125702	(Get FASTA)	NCBI Sequence Viewer
	XP_063125704	(Get FASTA)	NCBI Sequence Viewer
	XP_063125705	(Get FASTA)	NCBI Sequence Viewer
	XP_063125706	(Get FASTA)	NCBI Sequence Viewer
	XP_063125708	(Get FASTA)	NCBI Sequence Viewer
	XP_063125717	(Get FASTA)	NCBI Sequence Viewer
	XP_063125720	(Get FASTA)	NCBI Sequence Viewer
	XP_063125722	(Get FASTA)	NCBI Sequence Viewer
	XP_063125725	(Get FASTA)	NCBI Sequence Viewer
	XP_063125728	(Get FASTA)	NCBI Sequence Viewer
	XP_063125729	(Get FASTA)	NCBI Sequence Viewer
	XP_063125732	(Get FASTA)	NCBI Sequence Viewer
	XP_063125733	(Get FASTA)	NCBI Sequence Viewer
	XP_063125734	(Get FASTA)	NCBI Sequence Viewer
	XP_063125735	(Get FASTA)	NCBI Sequence Viewer
	XP_063125739	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDM11835	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000035987
	ENSRNOP00000035987.5
	ENSRNOP00000072843
	ENSRNOP00000072843.2
	ENSRNOP00000085191
	ENSRNOP00000085191.2
	ENSRNOP00000100236
	ENSRNOP00000100236.1
	ENSRNOP00000103657
	ENSRNOP00000103657.1

RefSeq Acc Id:

NP_001156749 ⟸ NM_001163277

- UniProtKB:

D3ZXX4 (UniProtKB/TrEMBL), A0A0G2K400 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MSKKGAGSRAKGDKAETLAALQAANEELRAKLTDIQIELQQEKSKVSKVEREKSQELKQVREHE
QRKHAVLVTELKTKLHEEKMKELQAVREALLRQHEAELLRVIKIKDNENQRLQALLNTLRDGAP
DKVKTVLLCEAKEEAKKGFEVEKVKMQQEISELKGAKKQVEEALTMVIQADKIKAAEIRSVYHL
HQEEITRIKKECEREIRRLMEEIRFKDRAVFVLERELGVQAGHAQRLQLQKEALDEQLSQAKEA
ERHPGSPRRELPYASGAGDASDHSGSPEQQLDEKDARRFQLKIAELSAIIRKLEDRNALLSEER
NELLKRLREAESQYKPLLDKNKRLTRKNEDLSHTLRRIESKLKFVTQENIEMRQRAGIIRRPSS
LNDLDQSQDEREIDFLKLQIVEQQNLIDELSKTLETAGYVKSVLERDKLLRYRKQRKKMAKLPK
PVVVETFFGYDEEASLESDGSSISYQTDRTDQTPCTPEDDLEEGMAKEETELRFRQLTMEYQAL
QRAYALLQEQVGGTLDAEREVKTREQLQAEIQRAQTRVEDLEKALAEQGQDMKWIEEKQALYRR
NQELVEKIKQMETEEARLKHEVQDAKDQNELLEFRILELEERERKSPAINFHHTPFVDGKSPLQ
VYCEAEGVTDILVTELMKKLDILGDNANLTNEEQVVVIQARTVLTLAEKWLQRIEETESALQRK
MVDLESEKELFSKQKGYLDEELDYRKQALDQAHKHILELEAMLYDALQQEAGAKVAELLSEEER
EKLKVAVEQWKRQVMSELRERDAQILRERMELLQIAQQRIKELEERIETQKRQIKELEEKFLFL
FLFFSLAFILWS

hide sequence

Ensembl Acc Id:

ENSRNOP00000072843 ⟸ ENSRNOT00000082751

Ensembl Acc Id:

ENSRNOP00000035987 ⟸ ENSRNOT00000030461

Ensembl Acc Id:

ENSRNOP00000085191 ⟸ ENSRNOT00000097687

RefSeq Acc Id:	XP_063125627 ⟸ XM_063269557
- Peptide Label:	isoform X1
- UniProtKB:	A0A0G2K400 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063125647 ⟸ XM_063269577
- Peptide Label:	isoform X1
- UniProtKB:	A0A0G2K400 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063125624 ⟸ XM_063269554
- Peptide Label:	isoform X1
- UniProtKB:	A0A0G2K400 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063125655 ⟸ XM_063269585
- Peptide Label:	isoform X2
- UniProtKB:	A0A0G2K400 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063125691 ⟸ XM_063269621
- Peptide Label:	isoform X13
- UniProtKB:	A0A0G2K400 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063125701 ⟸ XM_063269631
- Peptide Label:	isoform X15
- UniProtKB:	A0A0G2K400 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063125694 ⟸ XM_063269624
- Peptide Label:	isoform X14
- UniProtKB:	A0A0G2K400 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063125651 ⟸ XM_063269581
- Peptide Label:	isoform X1
- UniProtKB:	A0A0G2K400 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063125634 ⟸ XM_063269564
- Peptide Label:	isoform X1
- UniProtKB:	A0A0G2K400 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063125625 ⟸ XM_063269555
- Peptide Label:	isoform X1
- UniProtKB:	A0A0G2K400 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063125629 ⟸ XM_063269559
- Peptide Label:	isoform X1
- UniProtKB:	A0A0G2K400 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063125635 ⟸ XM_063269565
- Peptide Label:	isoform X1
- UniProtKB:	A0A0G2K400 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063125640 ⟸ XM_063269570
- Peptide Label:	isoform X1
- UniProtKB:	A0A0G2K400 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063125628 ⟸ XM_063269558
- Peptide Label:	isoform X1
- UniProtKB:	A0A0G2K400 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063125645 ⟸ XM_063269575
- Peptide Label:	isoform X1
- UniProtKB:	A0A0G2K400 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063125623 ⟸ XM_063269553
- Peptide Label:	isoform X1
- UniProtKB:	A0A0G2K400 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063125708 ⟸ XM_063269638
- Peptide Label:	isoform X18
- UniProtKB:	A0A0G2K400 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063125690 ⟸ XM_063269620
- Peptide Label:	isoform X13
- UniProtKB:	A0A0G2K400 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063125725 ⟸ XM_063269655
- Peptide Label:	isoform X21
- UniProtKB:	A0A0G2K400 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063125728 ⟸ XM_063269658
- Peptide Label:	isoform X22
- UniProtKB:	A0A0G2K400 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063125729 ⟸ XM_063269659
- Peptide Label:	isoform X23
- UniProtKB:	A0A0G2K400 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063125706 ⟸ XM_063269636
- Peptide Label:	isoform X17
- UniProtKB:	A0A0G2K400 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063125704 ⟸ XM_063269634
- Peptide Label:	isoform X16
- UniProtKB:	A0A0G2K400 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063125675 ⟸ XM_063269605
- Peptide Label:	isoform X8
- UniProtKB:	A0A0G2K400 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063125678 ⟸ XM_063269608
- Peptide Label:	isoform X9
- UniProtKB:	A0A0G2K400 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063125684 ⟸ XM_063269614
- Peptide Label:	isoform X11
- UniProtKB:	A0A0G2K400 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063125682 ⟸ XM_063269612
- Peptide Label:	isoform X10
- UniProtKB:	A0A0G2K400 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063125686 ⟸ XM_063269616
- Peptide Label:	isoform X12
- UniProtKB:	D3ZXX4 (UniProtKB/TrEMBL), A0A0G2K400 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063125717 ⟸ XM_063269647
- Peptide Label:	isoform X19
- UniProtKB:	A0A0G2K400 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063125733 ⟸ XM_063269663
- Peptide Label:	isoform X25
- UniProtKB:	A0A0G2K400 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063125734 ⟸ XM_063269664
- Peptide Label:	isoform X26
- UniProtKB:	A0A8I6GC59 (UniProtKB/TrEMBL), A0A0G2K400 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063125739 ⟸ XM_063269669
- Peptide Label:	isoform X28
- UniProtKB:	A0A0G2K400 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063125735 ⟸ XM_063269665
- Peptide Label:	isoform X27
- UniProtKB:	A0A0G2K400 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063125622 ⟸ XM_063269552
- Peptide Label:	isoform X1
- UniProtKB:	A0A0G2K400 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063125656 ⟸ XM_063269586
- Peptide Label:	isoform X3
- UniProtKB:	A0A0G2K400 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063125652 ⟸ XM_063269582
- Peptide Label:	isoform X2
- UniProtKB:	A0A0G2K400 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063125658 ⟸ XM_063269588
- Peptide Label:	isoform X4
- UniProtKB:	A0A0G2K400 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063125660 ⟸ XM_063269590
- Peptide Label:	isoform X5
- UniProtKB:	A0A0G2K400 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063125664 ⟸ XM_063269594
- Peptide Label:	isoform X6
- UniProtKB:	A0A0G2K400 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063125666 ⟸ XM_063269596
- Peptide Label:	isoform X7
- UniProtKB:	A0A0G2K400 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063125687 ⟸ XM_063269617
- Peptide Label:	isoform X13
- UniProtKB:	A0A0G2K400 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063125702 ⟸ XM_063269632
- Peptide Label:	isoform X16
- UniProtKB:	A0A0G2K400 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063125722 ⟸ XM_063269652
- Peptide Label:	isoform X21
- UniProtKB:	A0A0G2K400 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063125697 ⟸ XM_063269627
- Peptide Label:	isoform X15
- UniProtKB:	A0A0G2K400 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063125705 ⟸ XM_063269635
- Peptide Label:	isoform X17
- UniProtKB:	A0A0G2K400 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063125720 ⟸ XM_063269650
- Peptide Label:	isoform X20
- UniProtKB:	A0A0G2K400 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063125732 ⟸ XM_063269662
- Peptide Label:	isoform X24
- UniProtKB:	A0A0G2K400 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063125632 ⟸ XM_063269562
- Peptide Label:	isoform X1
- UniProtKB:	A0A0G2K400 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063125630 ⟸ XM_063269560
- Peptide Label:	isoform X1
- UniProtKB:	A0A0G2K400 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063125636 ⟸ XM_063269566
- Peptide Label:	isoform X1
- UniProtKB:	A0A0G2K400 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000100236 ⟸ ENSRNOT00000164586

Ensembl Acc Id:

ENSRNOP00000103657 ⟸ ENSRNOT00000142654

Protein Domains

Janus kinase and microtubule-interacting protein C-

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-D3ZXX4-F1-model_v2	AlphaFold	D3ZXX4	1-844	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1307177	AgrOrtholog
BioCyc Gene	G2FUF-57095	BioCyc
Ensembl Genes	ENSRNOG00000027590	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000030461	ENTREZGENE
	ENSRNOT00000030461.7	UniProtKB/TrEMBL
	ENSRNOT00000082751	ENTREZGENE
	ENSRNOT00000082751.3	UniProtKB/TrEMBL
	ENSRNOT00000097687	ENTREZGENE
	ENSRNOT00000097687.2	UniProtKB/TrEMBL
	ENSRNOT00000142654	ENTREZGENE
	ENSRNOT00000142654.1	UniProtKB/TrEMBL
	ENSRNOT00000164586	ENTREZGENE
	ENSRNOT00000164586.1	UniProtKB/TrEMBL
InterPro	JAKMIP	UniProtKB/TrEMBL
	JAKMIP_C	UniProtKB/TrEMBL
KEGG Report	rno:365380	UniProtKB/TrEMBL
NCBI Gene	365380	ENTREZGENE
PANTHER	JANUS KINASE AND MICROTUBULE-INTERACTING PROTEIN 3	UniProtKB/TrEMBL
	PTHR18935	UniProtKB/TrEMBL
Pfam	JAKMIP_CC3	UniProtKB/TrEMBL
PhenoGen	Jakmip3	PhenoGen
RatGTEx	ENSRNOG00000027590	RatGTEx
UniProt	A0A0G2K400	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6GC59	ENTREZGENE, UniProtKB/TrEMBL
	A0ABK0KYR5_RAT	UniProtKB/TrEMBL
	A0ABK0L3D8_RAT	UniProtKB/TrEMBL
	D3ZXX4	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2013-05-24	Jakmip3	janus kinase and microtubule interacting protein 3	LOC680494	hypothetical protein LOC680494	Data merged from RGD:1591706	1643240	APPROVED
2010-12-08	Jakmip3	janus kinase and microtubule interacting protein 3	RGD1307177	similar to Hypothetical protein KIAA0555	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-04-30	RGD1307177	similar to Hypothetical protein KIAA0555	RGD1307177_predicted	similar to Hypothetical protein KIAA0555 (predicted)	'predicted' is removed	2292626	APPROVED
2006-11-20	LOC680494	hypothetical protein LOC680494			Symbol and Name status set to provisional	70820	PROVISIONAL
2005-01-20	RGD1307177_predicted	similar to Hypothetical protein KIAA0555 (predicted)	LOC365380_predicted		Symbol and Name status set to approved	1331353	APPROVED
2005-01-12	LOC365380_predicted	similar to Hypothetical protein KIAA0555 (predicted)			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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