Dpt (dermatopontin) - Rat Genome Database

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Gene: Dpt (dermatopontin) Rattus norvegicus
Analyze
Symbol: Dpt
Name: dermatopontin
RGD ID: 1307176
Description: Predicted to be involved in collagen fibril organization. Predicted to act upstream of or within negative regulation of cell population proliferation. Predicted to be located in extracellular region. Orthologous to human DPT (dermatopontin); INTERACTS WITH 17alpha-ethynylestradiol; 2,3,7,8-tetrachlorodibenzodioxine; 6-propyl-2-thiouracil.
Type: protein-coding
RefSeq Status: VALIDATED
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81379,656,341 - 79,684,759 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1379,655,985 - 79,684,758 (+)EnsemblGRCr8
mRatBN7.21377,123,224 - 77,151,646 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1377,123,115 - 77,151,639 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1379,732,107 - 79,760,519 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01381,036,109 - 81,064,519 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01378,287,025 - 78,315,359 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01383,073,307 - 83,102,404 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1383,073,544 - 83,102,401 (+)Ensemblrn6Rnor6.0
Rnor_5.01387,954,222 - 87,983,319 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41380,562,890 - 80,591,361 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1376,840,691 - 76,869,164 (+)NCBICelera
RGSC_v3.11380,577,137 - 80,605,551 (+)NCBI
Cytogenetic Map13q23NCBI
JBrowse:




Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-dexrazoxane  (ISO)
(1->4)-beta-D-glucan  (ISO)
1,2-dichloroethane  (ISO)
1,2-dimethylhydrazine  (ISO)
17alpha-ethynylestradiol  (EXP)
17beta-estradiol  (ISO)
2,2',5,5'-tetrachlorobiphenyl  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
3,3',5,5'-tetrabromobisphenol A  (ISO)
3-isobutyl-1-methyl-7H-xanthine  (ISO)
4,4'-sulfonyldiphenol  (ISO)
4-hydroxyphenyl retinamide  (ISO)
6-propyl-2-thiouracil  (EXP)
7,12-dimethyltetraphene  (EXP)
acetamide  (EXP)
all-trans-retinoic acid  (ISO)
alpha-Zearalanol  (EXP)
antirheumatic drug  (ISO)
Aroclor 1254  (ISO)
arsane  (ISO)
arsenic atom  (ISO)
arsenous acid  (ISO)
benzo[a]pyrene  (ISO)
benzo[e]pyrene  (ISO)
Benzo[k]fluoranthene  (ISO)
bis(2-ethylhexyl) phthalate  (ISO)
bisphenol A  (EXP,ISO)
bisphenol AF  (EXP)
bisphenol F  (ISO)
Butylbenzyl phthalate  (ISO)
cadmium dichloride  (ISO)
calcitriol  (ISO)
cantharidin  (ISO)
CGP 52608  (ISO)
chenodeoxycholic acid  (ISO)
clofibric acid  (EXP)
corticosterone  (EXP)
deoxycholic acid  (ISO)
dexamethasone  (ISO)
diarsenic trioxide  (ISO)
dibenzofurans  (ISO)
dibromoacetic acid  (EXP)
diisononyl phthalate  (ISO)
dioxygen  (ISO)
diquat  (ISO)
diuron  (EXP)
doxorubicin  (ISO)
entinostat  (ISO)
ethylbenzene  (ISO)
flutamide  (EXP)
folic acid  (ISO)
folpet  (ISO)
fructose  (EXP)
furan  (EXP)
gentamycin  (EXP)
glycochenodeoxycholic acid  (ISO)
glycocholic acid  (ISO)
glycodeoxycholic acid  (ISO)
Indeno[1,2,3-cd]pyrene  (ISO)
indometacin  (ISO)
inulin  (ISO)
lead diacetate  (EXP)
lead nitrate  (ISO)
mercury atom  (ISO)
mercury(0)  (ISO)
methapyrilene  (EXP,ISO)
mono(2-ethylhexyl) phthalate  (ISO)
N,N-diethyl-m-toluamide  (EXP)
N-nitrosodiethylamine  (EXP,ISO)
nickel atom  (ISO)
okadaic acid  (ISO)
ozone  (EXP,ISO)
perfluorooctane-1-sulfonic acid  (ISO)
perfluorooctanoic acid  (EXP)
permethrin  (EXP)
phenobarbital  (ISO)
phenylephrine  (EXP)
pioglitazone  (ISO)
pirinixic acid  (ISO)
progesterone  (ISO)
rotenone  (EXP)
sodium arsenite  (ISO)
sodium dichromate  (ISO)
sodium fluoride  (EXP)
Sunset Yellow FCF  (ISO)
testosterone enanthate  (ISO)
tetrachloromethane  (EXP,ISO)
titanium dioxide  (ISO)
toluene  (ISO)
tributylstannane  (EXP)
trichloroethene  (EXP)
trimellitic anhydride  (ISO)
valdecoxib  (EXP)
valproic acid  (ISO)
vinclozolin  (EXP)
vitamin E  (ISO)
XL147  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
3. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
4. A seven-gene prognostic model related to immune checkpoint PD-1 revealing overall survival in patients with lung adenocarcinoma. Niu W and Jiang L, Math Biosci Eng. 2021 Jul 13;18(5):6136-6154. doi: 10.3934/mbe.2021307.
5. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:12230512   PMID:12395208   PMID:12477932   PMID:14980498   PMID:16877395   PMID:20551380   PMID:23262218   PMID:23376485   PMID:24006456   PMID:27068509   PMID:27559042  


Genomics

Comparative Map Data
Dpt
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81379,656,341 - 79,684,759 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1379,655,985 - 79,684,758 (+)EnsemblGRCr8
mRatBN7.21377,123,224 - 77,151,646 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1377,123,115 - 77,151,639 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1379,732,107 - 79,760,519 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01381,036,109 - 81,064,519 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01378,287,025 - 78,315,359 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01383,073,307 - 83,102,404 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1383,073,544 - 83,102,401 (+)Ensemblrn6Rnor6.0
Rnor_5.01387,954,222 - 87,983,319 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41380,562,890 - 80,591,361 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1376,840,691 - 76,869,164 (+)NCBICelera
RGSC_v3.11380,577,137 - 80,605,551 (+)NCBI
Cytogenetic Map13q23NCBI
DPT
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381168,695,468 - 168,729,206 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1168,695,457 - 168,729,206 (-)Ensemblhg38GRCh38
GRCh371168,664,706 - 168,698,444 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361166,931,330 - 166,965,052 (-)NCBIBuild 36Build 36hg18NCBI36
Build 341165,396,364 - 165,430,086NCBI
Celera1141,774,485 - 141,808,228 (-)NCBICelera
Cytogenetic Map1q24.2NCBI
HuRef1139,910,794 - 139,944,541 (-)NCBIHuRef
CHM1_11170,086,722 - 170,120,451 (-)NCBICHM1_1
T2T-CHM13v2.01168,050,592 - 168,084,377 (-)NCBIT2T-CHM13v2.0
Dpt
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391164,624,232 - 164,651,843 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1164,624,213 - 164,651,835 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm381164,796,663 - 164,824,274 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1164,796,644 - 164,824,266 (+)Ensemblmm10GRCm38
MGSCv371166,726,863 - 166,754,397 (+)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv361166,633,407 - 166,660,941 (+)NCBIMGSCv36mm8
Celera1167,227,731 - 167,255,812 (+)NCBICelera
Cytogenetic Map1H2.2NCBI
cM Map172.12NCBI
Dpt
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554628,451,112 - 8,480,827 (+)Ensembl
ChiLan1.0NW_0049554628,451,159 - 8,480,085 (+)NCBIChiLan1.0ChiLan1.0
DPT
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2180,662,672 - 81,069,860 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1180,331,075 - 80,738,643 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01144,182,053 - 144,218,632 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11147,904,343 - 147,938,224 (-)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1147,904,337 - 147,938,208 (-)EnsemblpanPan2panpan1.1
DPT
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1729,830,415 - 29,855,479 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl729,830,415 - 29,857,061 (+)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha729,361,634 - 29,386,699 (+)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.0729,647,765 - 29,672,841 (+)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl729,647,765 - 29,672,841 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1729,481,238 - 29,506,287 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0729,516,851 - 29,541,912 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0729,754,845 - 29,779,925 (+)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Dpt
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934499,876,357 - 99,900,968 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493648117,722,977 - 17,747,718 (+)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_00493648117,723,108 - 17,747,712 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
DPT
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl482,287,730 - 82,319,366 (+)EnsemblsusScr11Sscrofa11.1
Sscrofa11.1482,287,657 - 82,319,380 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2489,969,400 - 90,001,110 (+)NCBISscrofa10.2Sscrofa10.2susScr3
DPT
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12560,295,900 - 60,329,678 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2560,295,709 - 60,349,682 (+)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_02366605561,979,608 - 62,013,288 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Dpt
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248266,627,947 - 6,656,151 (-)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_0046248266,628,059 - 6,656,064 (-)NCBIHetGla 1.0HetGla 1.0hetGla2
Dpt
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v11043,980,576 - 44,009,720 (+)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Dpt
158 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:187
Count of miRNA genes:130
Interacting mature miRNAs:140
Transcripts:ENSRNOT00000066119
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1298066Bp159Blood pressure QTL 1590.004arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)134863963493639634Rat
10755495Bp387Blood pressure QTL 3873.78arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)133721624190057603Rat
1354655Bp241Blood pressure QTL 2413.9arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1338975045103588154Rat
8655951Rf63Renal function QTL 6312.2blood urea nitrogen amount (VT:0005265)plasma urea nitrogen level (CMO:0000586)1371610804109350286Rat
70220Bp55Blood pressure QTL 555.75arterial blood pressure trait (VT:2000000)blood pressure measurement (CMO:0000003)133992469384924693Rat
8655945Rf61Renal function QTL 613.6blood creatinine amount (VT:0005328)creatinine clearance (CMO:0000765)137161080489333251Rat
71119Thym2Thymus enlargement QTL 23.8thymus mass (VT:0004954)thymus weight to body weight ratio (CMO:0000612)134874981487285480Rat
4889861Pur29Proteinuria QTL 2913.80.005urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)133996821183286298Rat
1331783Bp221Blood pressure QTL 2213.72886arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)137161080489333251Rat
8655959Pur32Proteinuria QTL 328.4urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)137298450699745408Rat
2293687Bss26Bone structure and strength QTL 264.60.0001femur morphology trait (VT:0000559)femur cross-sectional area (CMO:0001661)1367635937109350286Rat
1300166Kidm6Kidney mass QTL 63.93kidney mass (VT:0002707)single kidney wet weight to body weight ratio (CMO:0000622)137161080489333251Rat
619615Bp80Blood pressure QTL 800.0354arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)13742179187286911Rat
61340Bp25Blood pressure QTL 254.20.004arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)133708798382087983Rat
1581573Uae36Urinary albumin excretion QTL 36urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)13600200888706694Rat
1549897Stresp12Stress response QTL 123.35stress-related behavior trait (VT:0010451)number of approaches toward negative stimulus before onset of defensive burying response (CMO:0001960)134098358585983585Rat
724564Uae11Urinary albumin excretion QTL 115.7urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)134735425894285672Rat
7207885Glom27Glomerulus QTL 273.9kidney glomerulus integrity trait (VT:0010546)kidney crescentic glomeruli count to kidney normal glomeruli count ratio (CMO:0002139)1321120177109350286Rat
738027Lnnr6Liver neoplastic nodule remodeling QTL 63.3liver integrity trait (VT:0010547)liver remodeling tumorous lesion number (CMO:0001461)1365613454109350286Rat
7387280Uae43Urinary albumin excretion QTL 435.690.4174urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)1368983334109350286Rat
738026Lnnr5Liver neoplastic nodule remodeling QTL 53.29liver integrity trait (VT:0010547)liver remodeling tumorous lesion number (CMO:0001461)136242459288113509Rat
2293702Bss34Bone structure and strength QTL 344.610.0001femur strength trait (VT:0010010)femur midshaft polar moment of inertia (CMO:0001669)1367635937109350286Rat
61349Bp31Blood pressure QTL 315.75arterial blood pressure trait (VT:2000000)blood pressure measurement (CMO:0000003)133992469384924693Rat
1576318Schws5Schwannoma susceptibility QTL 50.0351nervous system integrity trait (VT:0010566)post-insult time to trigeminal nerve neurilemmoma formation (CMO:0002019)1364497900109350286Rat
2303563Bw89Body weight QTL 896body mass (VT:0001259)body weight (CMO:0000012)133483494779834947Rat
1354621Rf47Renal function QTL 473.7kidney renin amount (VT:0010559)kidney renin level (CMO:0002166)1311081740103588154Rat
1581554Pur11Proteinuria QTL 11urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)13600200888706694Rat
12879477Bp401Blood pressure QTL 401arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)133981472684814726Rat
1331750Bp220Blood pressure QTL 2202.98arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)133996821184968211Rat
12879475Bp400Blood pressure QTL 400arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1364375743109350286Rat
11530006Niddm72Non-insulin dependent diabetes mellitus QTL 720.001blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)133828629883286298Rat
1354666Bp244Blood pressure QTL 2444.9arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)131103588154Rat
2293341Glom15Glomerulus QTL 159.1kidney glomerulus integrity trait (VT:0010546)kidney sclerotic glomeruli count to total glomeruli count ratio (CMO:0001269)1367635937109350286Rat

Markers in Region
D13Got56  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21377,127,858 - 77,128,138 (+)MAPPERmRatBN7.2
Rnor_6.01383,078,240 - 83,078,519NCBIRnor6.0
Rnor_5.01387,959,155 - 87,959,434UniSTSRnor5.0
RGSC_v3.41380,567,585 - 80,567,865RGDRGSC3.4
RGSC_v3.41380,567,586 - 80,567,865UniSTSRGSC3.4
Celera1376,845,387 - 76,845,666UniSTS
RGSC_v3.11380,581,773 - 80,582,053RGD
RH 2.0 Map13573.3RGD
Cytogenetic Map13q23UniSTS
RH133042  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21377,145,892 - 77,146,111 (+)MAPPERmRatBN7.2
Rnor_6.01383,096,270 - 83,096,488NCBIRnor6.0
Rnor_5.01387,977,185 - 87,977,403UniSTSRnor5.0
RGSC_v3.41380,585,616 - 80,585,834UniSTSRGSC3.4
Celera1376,863,417 - 76,863,635UniSTS
RH 3.4 Map13485.8UniSTS
Cytogenetic Map13q23UniSTS
RH142338  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21377,150,561 - 77,150,749 (+)MAPPERmRatBN7.2
Rnor_6.01383,100,939 - 83,101,126NCBIRnor6.0
Rnor_5.01387,981,854 - 87,982,041UniSTSRnor5.0
RGSC_v3.41380,590,285 - 80,590,472UniSTSRGSC3.4
Celera1376,868,086 - 76,868,275UniSTS
RH 3.4 Map13487.8UniSTS
Cytogenetic Map13q23UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
16 12 67 99 91 90 59 65 59 6 324 165 11 78 76 92 31

Sequence


Ensembl Acc Id: ENSRNOT00000066119   ⟹   ENSRNOP00000061146
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1377,123,163 - 77,151,638 (+)Ensembl
Rnor_6.0 Ensembl1383,073,544 - 83,102,396 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000075996   ⟹   ENSRNOP00000068380
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 Ensembl1383,073,866 - 83,101,177 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000077070   ⟹   ENSRNOP00000068106
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1379,655,985 - 79,684,752 (+)Ensembl
mRatBN7.2 Ensembl1377,123,168 - 77,151,639 (+)Ensembl
Rnor_6.0 Ensembl1383,073,550 - 83,102,401 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000079796   ⟹   ENSRNOP00000069812
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1379,656,289 - 79,684,758 (+)Ensembl
mRatBN7.2 Ensembl1377,123,115 - 77,151,639 (+)Ensembl
Rnor_6.0 Ensembl1383,073,549 - 83,102,397 (+)Ensembl
RefSeq Acc Id: NM_001401366   ⟹   NP_001388295
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81379,656,341 - 79,684,759 (+)NCBI
mRatBN7.21377,123,224 - 77,151,646 (+)NCBI
RefSeq Acc Id: NM_001401367   ⟹   NP_001388296
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81379,656,341 - 79,684,759 (+)NCBI
mRatBN7.21377,123,224 - 77,151,646 (+)NCBI
Ensembl Acc Id: ENSRNOP00000069812   ⟸   ENSRNOT00000079796
Ensembl Acc Id: ENSRNOP00000068106   ⟸   ENSRNOT00000077070
Ensembl Acc Id: ENSRNOP00000068380   ⟸   ENSRNOT00000075996
Ensembl Acc Id: ENSRNOP00000061146   ⟸   ENSRNOT00000066119
RefSeq Acc Id: NP_001388295   ⟸   NM_001401366
- Peptide Label: isoform 1 precursor
- UniProtKB: B2RZ77 (UniProtKB/TrEMBL),   A0A096MJF1 (UniProtKB/TrEMBL),   A6IDF2 (UniProtKB/TrEMBL),   D4A9H2 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001388296   ⟸   NM_001401367
- Peptide Label: isoform 2 precursor
- UniProtKB: A6IDF3 (UniProtKB/TrEMBL)

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-B2RZ77-F1-model_v2 AlphaFold B2RZ77 1-202 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13698968
Promoter ID:EPDNEW_R9483
Type:multiple initiation site
Name:Dpt_1
Description:dermatopontin
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01383,073,605 - 83,073,665EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1307176 AgrOrtholog
BioCyc Gene G2FUF-17589 BioCyc
Ensembl Genes ENSRNOG00000002947 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000077070 ENTREZGENE
  ENSRNOT00000077070.4 UniProtKB/TrEMBL
  ENSRNOT00000079796 ENTREZGENE
  ENSRNOT00000079796.3 UniProtKB/TrEMBL
IMAGE_CLONE IMAGE:7113939 IMAGE-MGC_LOAD
InterPro Dermatopontin_fam UniProtKB/TrEMBL
MGC_CLONE MGC:189353 IMAGE-MGC_LOAD
NCBI Gene 289178 ENTREZGENE
PANTHER DERMATOPONTIN UniProtKB/TrEMBL
  PTHR15040 UniProtKB/TrEMBL
Pfam DERM UniProtKB/TrEMBL
PhenoGen Dpt PhenoGen
RatGTEx ENSRNOG00000002947 RatGTEx
UniProt A0A096MJF1 ENTREZGENE, UniProtKB/TrEMBL
  A0A0G2JWB3_RAT UniProtKB/TrEMBL
  A6IDF2 ENTREZGENE, UniProtKB/TrEMBL
  A6IDF3 ENTREZGENE, UniProtKB/TrEMBL
  B2RZ77 ENTREZGENE, UniProtKB/TrEMBL
  D4A9H2 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2008-04-30 Dpt  dermatopontin   Dpt_predicted  dermatopontin (predicted)  'predicted' is removed 2292626 APPROVED
2005-01-12 Dpt_predicted  dermatopontin (predicted)      Symbol and Name status set to approved 70820 APPROVED