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Gene: Anapc1 (anaphase promoting complex subunit 1) Rattus norvegicus

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Symbol:

Anapc1

Name:

anaphase promoting complex subunit 1

RGD ID:

1306629

Description:

Predicted to enable molecular adaptor activity. Predicted to be involved in anaphase-promoting complex-dependent catabolic process; metaphase/anaphase transition of mitotic cell cycle; and protein polyubiquitination. Predicted to be located in nucleus. Predicted to be part of anaphase-promoting complex. Human ortholog(s) of this gene implicated in Rothmund-Thomson syndrome. Orthologous to human ANAPC1 (anaphase promoting complex subunit 1); PARTICIPATES IN cell cycle pathway, mitotic; ubiquitin/proteasome degradation pathway; INTERACTS WITH 17alpha-ethynylestradiol; 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

anaphase-promoting complex subunit 1; LOC311412

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	ANAPC1 (anaphase promoting complex subunit 1)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, Treefam
Mus musculus (house mouse):	Anapc1 (anaphase promoting complex subunit 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Anapc1 (anaphase promoting complex subunit 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	ANAPC1 (anaphase promoting complex subunit 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	ANAPC1 (anaphase promoting complex subunit 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Anapc1 (anaphase promoting complex subunit 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	ANAPC1 (anaphase promoting complex subunit 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	ANAPC1 (anaphase promoting complex subunit 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Anapc1 (anaphase promoting complex subunit 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Anapc1 (anaphase promoting complex subunit 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	DNAJC18 (DnaJ heat shock protein family (Hsp40) member C18)	HGNC	OMA
Alliance orthologs ³
Mus musculus (house mouse):	Anapc1 (anaphase promoting complex subunit 1)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	ANAPC1 (anaphase promoting complex subunit 1)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	anapc1 (anaphase promoting complex subunit 1)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Saccharomyces cerevisiae (baker's yeast):	APC1	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	mat-2	Alliance	DIOPT (Ensembl Compara\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	mat-2	Alliance	DIOPT (OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Drosophila melanogaster (fruit fly):	shtd	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	anapc1	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	3	136,303,350 - 136,383,464 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	3	136,303,413 - 136,383,464 (-)	Ensembl				GRCr8
mRatBN7.2	3	115,850,117 - 115,930,259 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	3	115,850,185 - 115,930,273 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	3	119,747,340 - 119,827,141 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	3	128,342,890 - 128,422,697 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	3	126,003,396 - 126,083,193 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	3	121,147,484 - 121,226,125 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	3	121,147,547 - 121,226,125 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	3	128,786,183 - 128,864,679 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	3	116,212,111 - 116,299,282 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	3	114,679,748 - 114,759,543 (-)	NCBI		Celera
RGSC_v3.1	3	116,120,249 - 116,203,526 (-)	NCBI
Cytogenetic Map	3	q36	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

High Myopia (ISO)

Rothmund-Thomson Syndrome Type 1 (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(+)-catechin (ISO)

1,1,1-Trichloro-2-(o-chlorophenyl)-2-(p-chlorophenyl)ethane (ISO)

1,2-dimethylhydrazine (ISO)

17alpha-ethynylestradiol (EXP,ISO)

17beta-estradiol (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2,4-dinitrotoluene (EXP)

2,6-dinitrotoluene (EXP)

2-methylcholine (ISO)

3,4-methylenedioxymethamphetamine (ISO)

3-isobutyl-1-methyl-7H-xanthine (ISO)

4-nitrophenol (ISO)

all-trans-retinoic acid (ISO)

amphetamine (EXP)

arsane (ISO)

arsenic atom (ISO)

arsenite(3-) (ISO)

benzo[a]pyrene (ISO)

bisphenol A (EXP,ISO)

Bisphenol A diglycidyl ether (ISO)

bisphenol AF (ISO)

bisphenol F (ISO)

Brodifacoum (EXP)

butan-1-ol (ISO)

butanal (ISO)

Butylbenzyl phthalate (ISO)

caffeine (ISO)

clofibrate (ISO)

cobalt dichloride (ISO)

copper atom (ISO)

copper(0) (ISO)

copper(II) sulfate (ISO)

coumarin (ISO)

dexamethasone (ISO)

dibutyl phthalate (ISO)

dorsomorphin (ISO)

doxorubicin (ISO)

epoxiconazole (ISO)

ethyl methanesulfonate (ISO)

flutamide (EXP)

folic acid (ISO)

FR900359 (ISO)

gemcitabine (ISO)

genistein (ISO)

glyphosate (ISO)

indometacin (ISO)

ivermectin (ISO)

ketamine (EXP)

Lasiocarpine (ISO)

manganese atom (ISO)

manganese(0) (ISO)

manganese(II) chloride (ISO)

menadione (ISO)

methotrexate (ISO)

methyl methanesulfonate (ISO)

methylmercury chloride (ISO)

oxaliplatin (EXP)

ozone (ISO)

paracetamol (EXP,ISO)

pentachlorophenol (ISO)

pentanal (ISO)

phenylmercury acetate (ISO)

pirinixic acid (ISO)

potassium chromate (ISO)

pyrogallol (ISO)

quercetin (ISO)

resveratrol (EXP,ISO)

riddelliine (ISO)

rotenone (EXP)

SB 431542 (ISO)

silicon dioxide (ISO)

sodium arsenate (ISO)

sodium arsenite (ISO)

succimer (ISO)

titanium dioxide (ISO)

topotecan (EXP)

triphenyl phosphate (ISO)

trovafloxacin (ISO)

valproic acid (ISO)

vinclozolin (EXP)

zearalenone (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

anaphase-promoting complex-dependent catabolic process (IBA,IEA,ISO)

cell division (IEA)

metaphase/anaphase transition of mitotic cell cycle (IBA)

protein branched polyubiquitination (IEA,ISO)

protein K11-linked ubiquitination (IBA,IEA,ISO)

protein K48-linked ubiquitination (IEA,ISO)

Cellular Component

anaphase-promoting complex (IBA,IEA,ISO)

nucleus (IEA,ISO)

Molecular Function

molecular adaptor activity (IBA)

protein binding (ISO)

Molecular Pathway Annotations Click to see Annotation Detail View

cell cycle pathway, mitotic (IEA)

ubiquitin/proteasome degradation pathway (IEA)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
3.	KEGG Annotation Import Pipeline	Pipeline to import KEGG annotations from KEGG into RGD
4.	GOA pipeline	RGD automated data pipeline
5.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
6.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:14744933	PMID:16364912	PMID:18485873

Genomics

Comparative Map Data

Anapc1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	3	136,303,350 - 136,383,464 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	3	136,303,413 - 136,383,464 (-)	Ensembl				GRCr8
mRatBN7.2	3	115,850,117 - 115,930,259 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	3	115,850,185 - 115,930,273 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	3	119,747,340 - 119,827,141 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	3	128,342,890 - 128,422,697 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	3	126,003,396 - 126,083,193 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	3	121,147,484 - 121,226,125 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	3	121,147,547 - 121,226,125 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	3	128,786,183 - 128,864,679 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	3	116,212,111 - 116,299,282 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	3	114,679,748 - 114,759,543 (-)	NCBI		Celera
RGSC_v3.1	3	116,120,249 - 116,203,526 (-)	NCBI
Cytogenetic Map	3	q36	NCBI

ANAPC1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	2	111,766,231 - 111,884,193 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	2	111,611,639 - 111,884,690 (-)	Ensembl			hg38	GRCh38
GRCh37	2	112,525,217 - 112,641,770 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	2	112,243,109 - 112,358,212 (-)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	2	112,242,872 - 112,357,972	NCBI
Celera	2	106,403,649 - 106,465,406 (+)	NCBI		Celera
Cytogenetic Map	2	q13	NCBI
HuRef	2	105,096,022 - 105,155,075 (-)	NCBI		HuRef
CHM1_1	2	112,530,036 - 112,646,728 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	2	112,191,142 - 112,310,602 (-)	NCBI		T2T-CHM13v2.0

Anapc1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	2	128,452,003 - 128,529,558 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	2	128,452,024 - 128,529,311 (-)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	2	128,610,083 - 128,687,406 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	2	128,610,104 - 128,687,391 (-)	Ensembl			mm10	GRCm38
MGSCv37	2	128,435,819 - 128,513,131 (-)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	2	128,304,145 - 128,378,821 (-)	NCBI		MGSCv36	mm8
Celera	2	129,840,854 - 129,918,028 (-)	NCBI		Celera
Cytogenetic Map	2	F1	NCBI
cM Map	2	62.63	NCBI

Anapc1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955470	2,183,766 - 2,262,900 (+)	Ensembl
ChiLan1.0	NW_004955470	2,182,163 - 2,262,804 (+)	NCBI	ChiLan1.0	ChiLan1.0

ANAPC1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	12	16,192,975 - 16,311,055 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	2A	16,194,907 - 16,313,892 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	2A	90,143,737 - 90,262,215 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	2A	112,983,873 - 113,036,429 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2

ANAPC1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	17	36,210,026 - 36,313,785 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	17	36,198,631 - 36,312,442 (-)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	17	35,980,284 - 36,083,761 (-)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	17	36,988,225 - 37,088,308 (-)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	17	36,988,257 - 37,088,316 (-)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	17	36,104,805 - 36,208,349 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	17	36,176,899 - 36,280,433 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	17	36,389,150 - 36,492,743 (-)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Anapc1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024406292	81,614,798 - 81,672,714 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936783	511,713 - 590,187 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936783	509,287 - 591,153 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

ANAPC1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	3	44,509,680 - 44,605,014 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	3	44,483,961 - 44,605,035 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	3	46,249,472 - 46,326,362 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

ANAPC1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	14	14,841,351 - 14,958,734 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	14	14,841,197 - 14,958,743 (-)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666080	4,732,844 - 4,851,660 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Anapc1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624749	460,699 - 569,545 (+)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624749	458,670 - 570,799 (+)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Anapc1
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	5	107,404,352 - 107,478,545 (-)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Anapc1
1155 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	260
Count of miRNA genes:	184
Interacting mature miRNAs:	214
Transcripts:	ENSRNOT00000055875
Prediction methods:	Miranda
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1582233	Insul10	Insulin level QTL 10	5.4	0.0015	blood insulin amount (VT:0001560)	serum insulin level times blood glucose level (CMO:0002040)	3	133259579	178259579	Rat
2301414	Kidm37	Kidney mass QTL 37		0.001	kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	3	96509147	141509147	Rat
2302373	Gluco39	Glucose level QTL 39	5.01		blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	3	129154923	182114333	Rat
70216	Cm14	Cardiac mass QTL 14	2.1		heart mass (VT:0007028)	heart wet weight (CMO:0000069)	3	51581665	184004958	Rat
2292591	Esta4	Estrogen-induced thymic atrophy QTL 4			thymus mass (VT:0004954)	thymus wet weight (CMO:0000855)	3	67641776	167835660	Rat
1358362	Srcrt2	Stress Responsive Cort QTL 2	2.78		blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	3	58601291	153936591	Rat
737818	Hcar12	Hepatocarcinoma resistance QTL 12	2.6		liver integrity trait (VT:0010547)	volume of individual liver tumorous lesion (CMO:0001078)	3	49872657	138829559	Rat
7387306	Bw124	Body weight QTL 124	3.2	0.0003	body mass (VT:0001259)	body weight (CMO:0000012)	3	104545086	149545086	Rat
1578754	Stresp16	Stress response QTL 16	4	0.001	blood renin amount (VT:0003349)	plasma renin activity level (CMO:0000116)	3	133134628	178134628	Rat
1300111	Rf12	Renal function QTL 12	3.78		renal blood flow trait (VT:2000006)	absolute change in renal blood flow rate (CMO:0001168)	3	81425008	141509147	Rat
1600376	Arunc5	Aerobic running capacity QTL 5		0.21	exercise endurance trait (VT:0002332)	longest distance run on treadmill (CMO:0001406)	3	93829559	138829559	Rat
8694437	Bw167	Body weight QTL 167	22.46	0.001	retroperitoneal fat pad mass (VT:0010430)	retroperitoneal fat pad weight to body weight ratio (CMO:0000635)	3	112250810	157250810	Rat
8662816	Vetf4	Vascular elastic tissue fragility QTL 4	4		renal artery integrity trait (VT:0010642)	number of ruptures of the internal elastic lamina of the renal arteries (CMO:0002563)	3	79649560	177741895	Rat
1581503	Cm58	Cardiac mass QTL 58	2.7	0.05	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	3	96509147	141509147	Rat
1354611	Despr2	Despair related QTL 2	3.03	0.0028	locomotor behavior trait (VT:0001392)	amount of time spent in voluntary immobility (CMO:0001043)	3	117537367	162537367	Rat
2303620	Vencon4	Ventilatory control QTL 4	3.9		respiration trait (VT:0001943)	tidal volume (CMO:0000222)	3	125116475	170116475	Rat
631649	Bp123	Blood pressure QTL 123	3.2		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	3	110225882	155225882	Rat
1358204	Insglur1	Insulin/glucose ratio QTL 1	3.8		blood glucose amount (VT:0000188)	serum glucose level (CMO:0000543)	3	136091420	155634702	Rat
12879848	Bw181	Body weght QTL 181		0.015	body mass (VT:0001259)	body weight (CMO:0000012)	3	90755164	141509147	Rat
5686842	Rf59	Renal function QTL 59			urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	3	122395989	167395989	Rat
2301971	Cm71	Cardiac mass QTL 71	4.63		heart left ventricle mass (VT:0007031)	heart left ventricle weight (CMO:0000776)	3	131036586	176036586	Rat
1358885	Bp251	Blood pressure QTL 251	3.8		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	3	1	141509147	Rat
2301970	Bw81	Body weight QTL 81	5.19		body mass (VT:0001259)	body weight (CMO:0000012)	3	131036586	176036586	Rat
1581546	Pur13	Proteinuria QTL 13	2.93	0.0335	urine total protein amount (VT:0000032)	urine protein excretion rate (CMO:0000759)	3	98651826	167012663	Rat
631665	Bw8	Body weight QTL 8	5.5		body mass (VT:0001259)	body weight (CMO:0000012)	3	125814931	139636791	Rat
1331758	Bp207	Blood pressure QTL 207	2.848		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	3	110634702	155634702	Rat
1358888	Bp264	Blood pressure QTL 264	4.43		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	3	5675975	141509147	Rat
724532	Cm17	Cardiac mass QTL 17	2		heart mass (VT:0007028)	calculated heart weight (CMO:0000073)	3	116188400	161188400	Rat

Markers in Region

D3Uwm4

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	136,366,317 - 136,366,496 (+)	Marker Load Pipeline
Celera	3	114,742,602 - 114,742,771	UniSTS
Cytogenetic Map	3	q36	UniSTS

D3Got233

Rat Assembly	Chr	Position (strand)	Source	JBrowse
Rnor_5.0	3	128,830,213 - 128,830,361	NCBI	Rnor5.0
RGSC_v3.4	3	116,251,635 - 116,251,861	UniSTS	RGSC3.4
Celera	3	114,715,348 - 114,715,572	UniSTS
Cytogenetic Map	3	q36	UniSTS

BF391263

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	3	115,856,599 - 115,856,699 (+)	MAPPER	mRatBN7.2
Rnor_6.0	3	121,153,962 - 121,154,061	NCBI	Rnor6.0
Rnor_5.0	3	128,858,099 - 128,858,198	UniSTS	Rnor5.0
RGSC_v3.4	3	116,218,526 - 116,218,625	UniSTS	RGSC3.4
Celera	3	114,686,163 - 114,686,262	UniSTS
RH 3.4 Map	3	995.5	UniSTS
Cytogenetic Map	3	q36	UniSTS

RH133802

Rat Assembly	Chr	Position (strand)	Source	JBrowse
GRCr8	3	136,305,558 - 136,305,765 (+)	Marker Load Pipeline
mRatBN7.2	3	115,852,330 - 115,852,537 (+)	MAPPER	mRatBN7.2
Rnor_6.0	3	121,149,693 - 121,149,899	NCBI	Rnor6.0
Rnor_5.0	3	128,862,261 - 128,862,467	UniSTS	Rnor5.0
RGSC_v3.4	3	116,214,257 - 116,214,463	UniSTS	RGSC3.4
Celera	3	114,681,894 - 114,682,100	UniSTS
RH 3.4 Map	3	993.5	UniSTS
Cytogenetic Map	3	q36	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	164	91	90	59	92	59	6	356	192	11	143	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001107771	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006234973	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008762177	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063283753	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	CH473949	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000003	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000055875 ⟹ ENSRNOP00000052727

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	3	136,303,413 - 136,383,464 (-)	Ensembl
mRatBN7.2 Ensembl	3	115,850,185 - 115,930,273 (-)	Ensembl
Rnor_6.0 Ensembl	3	121,147,547 - 121,226,125 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000099712 ⟹ ENSRNOP00000087529

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	3	136,303,413 - 136,383,464 (-)	Ensembl
mRatBN7.2 Ensembl	3	115,850,185 - 115,930,239 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000111998 ⟹ ENSRNOP00000085653

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	3	136,303,413 - 136,380,502 (-)	Ensembl
mRatBN7.2 Ensembl	3	115,850,185 - 115,930,273 (-)	Ensembl

RefSeq Acc Id:

NM_001107771 ⟹ NP_001101241

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	136,303,413 - 136,383,464 (-)	NCBI
mRatBN7.2	3	115,850,185 - 115,930,239 (-)	NCBI
Rnor_6.0	3	121,147,547 - 121,226,125 (-)	NCBI
Rnor_5.0	3	128,786,183 - 128,864,679 (+)	NCBI
RGSC_v3.4	3	116,212,111 - 116,299,282 (-)	RGD
Celera	3	114,679,748 - 114,759,543 (-)	RGD

Sequence:

show sequence

AGGTCGGGAAATCCAAGATGGATACATTCATTTGAGTTCTTCGCCAATTTTTGGTATCACGCTG
CGGCCCATTCTTCCTCCGACATCAGAGAGGGAAAAGGGATGAGAAACTGTGGCGACGAGGAGCC
ATCGTGACCGTCTTGCCGCTGCTCTCGGGCCTTCGGGGCCCCTGTGCCTCCGGGGAGCAGCCGG
GGCTCGCAAGCGCCTGACGCGTCCCGAGTCACTCAGAAATAATGTTGATATTTGGAACCCATGT
CGAACTTCTCTGAAGAAAGGGCAACGATGATTGCAGCCGGGGATCTGCAGGAATTCGTTCCTTT
TGGTCGAGACCACTGCAAGCACCACCCTAATGCTCTGAACCTTCAGCTTCGTCAGCTGCAGCCA
GCTTCTGAGTTATGGTCTTCCGATGGTGCAGCTGGCTTGGTGGGATCTCTTCAGGAGGTTACGA
TCCATGAGAAACAGAAGGAAAGCTGGCAGTTAAGAAAAGGCGTGAGCGAGATTGGAGATGCAGC
CGACTATGATGAAGAGCTCTATGTGGCTGGGAACATGGTTATCTGGAGCAAAGGGAGTAAAAGC
CAGGCCTTGGCAGTGTACAAAGCCTTCACAGTGGACAGCACTGTTCAGCAGGCATTGTGGTGTG
ACTTCATTATATCACAGGATAAGTCCGAAAAGATCTATAAGAGCCATGAACTAGAGAAATGCAT
ATGTATATTACAGAGCTCGTGTATGAACATGCACAGCATAGACGGGAAGGATTACATAGCTTCC
TTACCATTTCAGGTGGCAAACGTGTGGGCCACTAAGTATGGCTTGCTGTTTGAACGAAGCAGTT
CTTCACATGAGGTGCCTCCAAGTCTACCTAGAGAGCCTTTGCCTACCATGTTCAGCATGCTGCA
CCCTCTGGATGAGATAACTCCACTTGTTTGTAAATCCGGAAGTCTTTTTGGCTCATCGCGGGTG
CAGTATGTTGTAGATCCAGCAGTGAAAATTGTGTTTCTGAACATTGACCCCTCCATTGTAATGA
CCTATGATGCTGTTCAGAATGTGCATTCTGTGTGGACTCTCAGGAGGGTAAAGCCAGAGGAAGA
GACTGCTGTTTTAAAGTTCCCTGAGCAGGCAGGGACCCTGCAGAATGCAGCCACTAGCAGCTCC
CTGACAGCACATCTCAGAAGCCTCTCCAAAGGCGAGTCCCCTGTTGCTTCGCCGTTCCAGAATT
ACTCTTCCATTCACAGCCAGAGCCGCTCAGCCTCCTCACCCAGCCTACACTCCCGGTCGCCTTC
CATTTCCAACATGGCGGCTCTAAGTCGTGCTCACTCTCCTGCCTTAGGTGTGCACTCTTTCTCA
GGGGTGCAAAGATTCAACCTTTCAAGCCACAATCAGTCACCAAAGAGACACAGTATTTCCCACT
CTCCGAGTGGCAGTTTCAACGATTCATTTTTGGCACCAGAAACAGAGCCAATTGTTCCTGAGCT
TTGCATTGACCACTTGTGGACTGAGACACTTCCGAATATGAGAGAGAAAAATTCTCAGGCCTCC
AAGGTATTTATAACGACTGACCTGTGTGGACAGAAGTTCCTGTGCTTTTTAGTGGAGGCCCAGC
TTCAGTTACGCTGTGTAAAGTTTCAAGAGAGTAATGACAAGACTCAGCTTATCTTTGGCTCTGT
CACCAACATACATGCAAAAGACGCAGCCCCAGTGGAGAAGATAGACACCATGTTGGTACTCGAA
GGCAATGGGAATCTGGTGCTGTACACAGGAGTGGTTCGGGTGGGGAAAGTGTTTATTCCTGGAC
TTCCAGCTCCTTCCCTGACAATGTCCAACATGATGCCTCGGCCCAGTACCCCACTCGATGGTGT
TAGCACTCCGAAGCCTCTTAGCAAATTACTTGGATCAATGGATGAGGTGGTTCTTCTGTCTCCA
GTTCCAGAATTGAGGGATTCTTCAAAACTTAACGATTCTCTCTACAATGAGGATTGTACATTCC
AGCAGCTTGGAACTTACATTCATTCAGTGCGAGACCCTGTTCATAACAGAGTCACTCTAGAACT
GAGCAACGGCTCCATGGTTAGGATCACTATCCCTGAAGTGGCCACCTCGGAATTAGTGCAAACG
TGTCTGCAAGCAATTAAGTTCATCCTGCCGAAAGAAGTAGCAGTTCAGGTGCTCGTCAAGTGGT
ACAATGTGCACAGTGCTCCGGGAGGACCCAGTTGTCACTCAGAGTGGAGTTTATTTGTGATTTG
TCTCTTGAACATGATGGGTTATAACACAGACCGCTTAGCATGGACGCGAAGTTTCGACTTTGAA
GGATCACTTTCCCCAGTCATTGCACCCAAAAAAGCGAGGCCCTCTGATACTGGGTCTGACGATG
ACTGGGAGTACTTACTGAATTCAGAGTACCATCATAATGTTGAGTCTCATCTTTTGAACAAATC
TCTATGTTTGAATGCTTTGGAAGTTACAAAGACAAAAGATGAAGATTTTCCACAAAACCTCAGT
CTGGATTCTTCTACTCTTCTCTTTGCTCACATTCCTGCAATTTTTTTTGTTCTTCACCTGGTTT
ATGAAGAGCTTAAGTTAAATACTCTAATGGGAGAAGGAATTTGTTCTCTAATTGACCTCCTTGT
TCAGTTGGCAAGGGACTTAAAATTGGAGCCTTACTTGGACCATTACTACAGAGATTACCCAACT
CTTGTCAAAACTACTGGACAAGTGTGTACCATTGACCAAGGTCAGATGGGATTTATGCATCATC
CCTCATTTTTTACTTCCGAGCCACCAAGTATTTATCAGTGGGTGAGTTCGTGCCTGAAGGGCGA
AGGAACGCCACCCTATCCCTACCTCCCTGGGATCTGCGAGAGGAGCAGGCTGGTGGTCTTGAGT
ATTGCCCTCTACACCCTTGGTGATGAGAGTTGTGTTTCTGATGAAACCTCCCAGTATTTATCCA
AAGTAACCTTAACTCCCCAAAAGCCACAAGCAGAACAAGAAGAAAACAGGTTTACTTTCCGGCA
GTCTGCTTCTGTGTCTGTTCTGGCTGAGAGACTGGTTGTCTGGATGGCCAGTGTAGGATTCACT
TTAAGAGATCTGGAGACTCTTCCCTTTGGGATTGCTCTTCCCATCAGAGATGCAATCTACCACT
GTCGGGAGCAGCCTGATTCAGATTGGTCAGAAGCCGTCTGTCTCCTGATTGGACGTCAGGACCT
TTCCAAGCAGGCTTGCGAAGGAAATTTACCCAGAGGCAAATCTGTGCTCTCATCAGATGTGGCT
TCAGGAGCTGAGGCTGAGGAGGAAGACGATGGCATGAATGACTTGAACCATGAGGTTATGTCAT
TAATATGGAGTGAAGATTTACGGGTGCAGGATGTGCGAAGGCTACTTCAAAGTGCACAGCCTGT
CCGTGTCAATGTGGTACAGTACCCAGAACTCAGTGACCATGAGTTCATTGAGGAAAAAGAAAAC
AGGCTGCTCCAGTTGTGTCAGCGAACTATGGCCCTTCCAGTAGGACGAGGGATGTTTACCTTGT
TCTCATACCATCCTGTTCCAACAGAGCCGTTGCCCATTCCTAAATTGAATCTGACAGGGCGAGC
CCCTCCGAGAAACACAACTGTAGATCTTAATAGTGGGAACATCGATGTGCCTCCCAATATGGCA
AGTTGGGCCAGCTTTCATAATGGTGTGGCTGCTGGCCTGAAGATAGCCCCTGCCTCCCAGATAG
ACTCAGCTTGGATTGTTTACAACAAGCCAAAGCATGCTGAGTTAGCCAATGAGTACGCAGGCTT
TCTCATGGCCCTAGGTCTGAATGGGCACCTTACCAAGCTGGCTACTCTCAATATCCATGACTAC
TTGACCAAGGGCCATGAAATGACAAGCATTGGATTGCTACTTGGTGTTTCTGCTGCAAAACTTG
GCACCATGGACATGTCAATTACCCGGCTTCTTAGCATTCACGTTCCTGCTCTCTTACCCCCGAC
ATCCACAGAGCTTGATGTGCCTCACAATGTCCAAGTGGCGGCTGTGGTTGGCATTGGCCTTGTT
TATCAAGGCACAGCTCACAGACATACTGCAGAAGTCCTGTTGGCTGAAATAGGGCGGCCCCCTG
GTCCAGAAATGGAATATTGCACTGACAGAGAATCCTACTCCTTAGCTGCTGGCCTGGCCCTGGG
CATGGTTTGCTTGGGGCATGGCAGCAATTTGATTGGCATGTCTGACCTCAATGTGCCTGAGCAG
CTGTATCAGTACATGGTCGGAGGTCACAGGCGTTTTCAAACTGGAATGCACAGGGAGAAACATA
AGTCTCCAAGTTACCAGATCAAAGAAGGAGATACCATAAACGTGGACGTGACTTGTCCAGGCGC
TACTCTGGCTCTGGCTATGATCTACTTGAAAACCAATAACAGATCTATTGCTGATTGGCTGCGA
GCTCCTGATACCATGTATTTGCTCGACTTTGTGAAACCAGAGTTCCTCTTGCTTAGGACACTTG
CTCGGTGCCTGATCCTGTGGGATGACATTTTACCGAATTCCAAGTGGGTTGACAGCAATGTTCC
TCAGATTATAAGAGAAAATAGTATCTCTCTGAGTGAGATTGAATTGCCTTGTTCAGAGGACTTG
AATTTGGAAACCTTGTCGCAAGCACACGTCTACATCATCGCAGGAGCCTGCTTGTCTCTGGGTT
TTCGATTTGCTGGCTCAGAGAACTTATCAGCATTTAACTGTCTGCATAAATTTGCAAAAGATTT
TATGAATTATTTATCTGCACCCAATGCTTCTGTAACAGGGCCCTACAACCTCGAAACCTGCCTG
AGTGTTGTCCTGCTGTCTCTTGCCATGGTGATGGCTGGCTCTGGGAACCTGAAGGTGTTGCAGC
TCTGCCGCTTCCTGCATATGAAGACGGGCGGAGAGATGAACTATGGCTTCCACTTGGCCCACCA
CATGGCCCTGGGCCTTCTCTTTTTGGGAGGAGGAAGGTACTCTTTGAGCACATCCAACTCATCC
ATTGCTGCCCTTCTCTGTGCCCTTTACCCACATTTCCCAGCCCACAGCACTGACAACCGGTATC
ATCTCCAGGCCCTTCGGCACCTCTACGTGCTGGCTGCAGAACCAAGGCTCCTGGTGCCTGTGGA
TGTGGATACAAACACACCCTGCTATGCCCTTATAGAAGTTACTTACAAGGGCACTCAGTGGTAT
GAACAGACCAAAGAAGAACTGATGGCTCCAACCCTGCTTCCAGAACTCCATCTTCTAAAGCAGA
TGAAGGTTAAAGGGCCAAGATACTGGGAACTGCTCATAGATTTAAGCAAGGGAGAGCAGCACTT
GAGGTCCATTCTTTCCAAGGATGGAGTTTTATATGTAAAGCTCAGGGCAGGCCAGCTCTCCTAC
AAAGAAGACCCAATGGGGTGGCAGAGTCTGTTGGCACAGACTGTGGCTAACAGGAACTCAGAGG
CCCGGGCTTTCAAGCCAGAAACAATTTCATCATTCACTTCTGATCCAGCACTTCTGTCATTTGC
TGAATATTTCTGCAAGCCGACTGTGAGCATGGGCCAAAAACAGGAGATTCTGGACCTCTTTTCT
TCCATACTTTATGAGTGTGTTGCTCAGGAAACTCCAGAGATGTTGCCTGCCTACATAGCAATGG
ATCAGGCTTTAAGAAGTCTTAAAAAGAGAGACATGTCGAACACATCTGATCTTTGGCAGATAAA
GTTGATATTAGAGTTTTTCAGTTCACGAAGCCACCAGGAAAGGCAGCAGACCTATCCTAAGCGA
GGGCTCTTCATAAACTCGGAGTTCCTACCTGTGGTGAAGTGCACTGTTGATTCCACCCTGGACC
AGTGGCTACAAGCTGGAGGCGATGTGTGTGTGCATGCCTACCTTAGTGGGCAGCCTGTTGAGAA
GTCTCAGCTAAACATGCTGGCCTGCTTCCTGGTCTACCACTCTGTGCCAGCACCGCGACACTTG
CCACCCCTGGGACTGGAAGGGAGCACAAGCTTTGCTGAACTCCTCTTCAGGTTCAGACACCTAA
AAATGCCAGTCCGCGCTTTGCTGAGACTGGCTCCTGTGCTGCTCGGGAATCCACAGCCGATGGT
TATGTGACCGACCACCTCCGGCGGTAAACCTACCCCCAAAAACCACTGCGGCGCAGAATCCTGA
TGGCAGCAAAGTTACGGCAGCATTTCTGTTTTGTGACCAACGGAGCTCAGATGCATACGCCTCA
CTGTGTTTAAAACCCATGTTGAAAATATTACAGATAACGCTGGTGCTGTCCATATGTCATATGA
TGTATAAAAAGTCAGTTAAAACTCACTTTTATAAATAAAGATTTTTGGTTTGTTTTCGAAGCTA
TTGATGATTGCTTTGGACTTCAGAGAATAAATGGACAGGCTGAGTTTTGAAGCCTTTGAACTTT
AGTGGTTCTGTACTCAGAAAAAGCCACATCGCGAGAGTGGACTTTCTGCTACCCCAGGAGAGTT
TCTGTGTTGTCTGTTACGTGCTTCCCATGGTGGATGATGTCTTTACTGCGAGCAGATTTCTACT
TAATGAAGACTTGCTCAGCATGGAGTACTGGACCATGCCCAAGCCCTGCCTTTGTACAGCTATG
TAGGCTGCAGCTCTTTGGAGATAACCAAGGTTAAAGGATAATTAAGGGTGAGTCCCTGTTTTGT
AGACTTGATGGCCTGTTCAGAAGAGGAAGAGATGTCTTCTCTCTGCACCTTGTGAGAACTCATA
GCACAGCTGCTCACAAGCCAAGAAGATTCCTTTGTGAGGAACCAGTCAGAAGGTCTTGGACTTC
TGCACCTACGAGTATAAGAAATAAATTCCTGATGCTTAAGCCATCCTATCTTGTCTGTGGTACT
TGGTTTTGCAGCCTGTGCAGACTAGTGCACGACACCTGCTCAAAATACCTAAATACAAAGTTAC
CCCACAGAGGAGTGTTAAAATATTTTTAAAGGCAGAAGTCAGTCTATCTGGAAAGTGCTTTTGT
ACAGGTTAGCTCATGATGGCCATGTGACAGGAAGAGTGTTCCTACTGTGCTCACAGCTTCTCAG
ACAAGTGGGACTGTGAACAAGGAGGAACAGCAAACTGCACACTCACTGGTTTCCTGCTTGTTTC
TGAAAAAGCCAATAGAAATTGCTCCGCTGGGATTTGGTAATGTCCGTCTGCTCGTCTGCCTGCA
GCAAGGTAATTTGTGGCTGACTTTTAGGGCAAAATGTGTTTTCCTTCCCTCTTAGATTAAGGAT
TGCACTTAAGTGGCAAGGGGTGATGAACGTTCAGTTTGCATCAACATCGAACCCACCGTCCAAG
TAATTTTTCACTCTCAGTTGTTATGGTGGCCATGGGAGGACTTGAAAGAGAGCACTGACTACAG
TGGAAGCAGCATTGATGGGCACCAAGAAGAGATTCTAGTGCCCCTGAGTCAGCATGTTAGCATC
ATCAGATAAACTAGTATATTTACCATCCTGTGGGAACCAGTCTTACCAAACACAGCAGCTGCCT
CCTGGGAACCACATCGAGGGGAGAGTCAGAGAAACACCTGGCAGTGAAGTATTCTAATATCAGA
AGTGGCACTTGTGACTTCAAGGGAAGGCTGACTACCCAGGATTGCTTCACGTCTGATGCGTGTG
GAATGGGGACTCAAGGTGTAGCCGCTTTGAGTGCAGGTACTGTCCAGCAGACAGACAATTGAGC
ATGTACTCAGATTCTTCCCCCAAAGGGTACTGACGTCTGCTCCTCCCTCAAGGTCTGATGTGGG
AGCCAAGGCAATGAGCTCAGATGCCAGACTTGAGCTACACTGCTTCATCGTAGTCCTCAACATT
CTGGGCTTTACCCAGTCTGCTACACCCAACCCTGCTCCAGTCTGCTGCTGCCTGTGTGGATTCT
GAGTCCAAGAGAATCAGAAACAGCTCCTCAGTGTGAACTGAAAGGACTTAGCATTGACAGAACT
TGTGAACCGGCCGAAAAGCAGGCAAACATCTTTGTAATCACAGGGGTTTTTGTGCGTTTTCTTG
ATGTTTCTCCCATTGACTTAGTCTGTCACTATTGATCACATTATATAGAGCATCTTGTTCAAGT
TTTGTTTTTTAGCTAAAAACACTTCTTTGGTAAACTTTTAATACTGTAATTTTTTTCCTCTAGA
ATATTTTCGAGTGTACTTTTAAGACTCTTTTTCCCTTGAAACATATCAGAATTTTAAAACAGGA
ATTTCATAATAAATTTAGTAAGATTTATAAGCACCTGCCAGATCTTAATTCCTGTTCTTTTATA
CTCCAATGCTTAGCTGAGCTGTTAGCTTTTCTCTGTAGCTAATGGATGTCTCAAGTCTCTGCCT
TGTGAGGCTGCAGACCATGTGTTTTAAAAACTCAAGATGTGGGGCTAGAGGCATGGCTCAGTGG
TTAAAAGCACTGACTGCTCTTCCAGAGAGATCCTGAGTTCAATTCCCAGCAACCACATGGTGGC
TCACAGCTATCTGTAATGGGATCTGATGCCCTCTTCTGGTGCGTCTGAAGAGAATGGCATACAT
AAAATCTTAAAAGAATTCAAGACATGTTGGGTCATGATGTCATGGTCACCTTATAGGTGGAGGG
TAGGTACCTAAAACAAGGACAAAAGCCAGAAGCTAGTGTTGATAATTTCCTTCTGGTTGAAGGA
GGAGGGGAGGCTCAAGACATTAAGCTTCACATGTCTTGGAAAGCTGAAGCCCAAGAGCCACAAA
GTGCTTCCCCAAGGTTGTAGAAATGGACAGGACAGAAGGGGACAGGTTGACTGTTAGCAGCAGA
GCTCCCCAGAGGAGGCCTGGCTGCCTGGGAGGCGATTCCCTGACTAGTCAAACAGCCTGCAAGT
TGTGTAGAGTTGTTCTTGTTGAGGTGGGCTTTAGGTGATACAGATGCTTCTGAGTCATTCCTG

hide sequence

RefSeq Acc Id:

XM_006234973 ⟹ XP_006235035

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	136,303,350 - 136,383,098 (-)	NCBI
mRatBN7.2	3	115,850,117 - 115,929,757 (-)	NCBI
Rnor_6.0	3	121,147,484 - 121,225,783 (-)	NCBI
Rnor_5.0	3	128,786,183 - 128,864,679 (+)	NCBI

Sequence:

show sequence

GGAACCCGAGTCTCAGACTGGGCTTTTCCGGTTGGGCCGACGCGACCCGCGCACTGAGCCAGAT
GCTCCGGCCGCTGCGCCTGTAGCGCGGTTTACTCAAATGCACGGAAAGCCTATTTTTGTAGACC
CAACTCAGGGTCCCGCTGTTTGCATATGTATCTAGTAACCAGTAATAACAGTTTTACTTCTAGC
ATGTCAACTCCGTGCTTTGATGTGGCCTGTAACGAATAACAAGTTTAACAACTTTTGGAGACCT
GTGAAAGTATTAAGTATGATGCCTTTGGGCTAAAAGACGTCGAACTGTGAAAATGATGCTGTAA
AAAGCAATCCTAAATAATGTTGATATTTGGAACCCATGTCGAACTTCTCTGAAGAAAGGGCAAC
GATGATTGCAGCCGGGGATCTGCAGGAATTCGTTCCTTTTGGTCGAGACCACTGCAAGCACCAC
CCTAATGCTCTGAACCTTCAGCTTCGTCAGCTGCAGCCAGCTTCTGAGTTATGGTCTTCCGATG
GTGCAGCTGGCTTGGTGGGATCTCTTCAGGAGGTTACGATCCATGAGAAACAGAAGGAAAGCTG
GCAGTTAAGAAAAGGCGTGAGCGAGATTGGAGATGCAGCCGACTATGATGAAGAGCTCTATGTG
GCTGGGAACATGGTTATCTGGAGCAAAGGGAGTAAAAGCCAGGCCTTGGCAGTGTACAAAGCCT
TCACAGTGGACAGCACTGTTCAGCAGGCATTGTGGTGTGACTTCATTATATCACAGGATAAGTC
CGAAAAGATCTATAAGAGCCATGAACTAGAGAAATGCATATGTATATTACAGAGCTCGTGTATG
AACATGCACAGCATAGACGGGAAGGATTACATAGCTTCCTTACCATTTCAGGTGGCAAACGTGT
GGGCCACTAAGTATGGCTTGCTGTTTGAACGAAGCAGTTCTTCACATGAGGTGCCTCCAAGTCT
ACCTAGAGAGCCTTTGCCTACCATGTTCAGCATGCTGCACCCTCTGGATGAGATAACTCCACTT
GTTTGTAAATCCGGAAGTCTTTTTGGCTCATCGCGGGTGCAGTATGTTGTAGATCCAGCAGTGA
AAATTGTGTTTCTGAACATTGACCCCTCCATTGTAATGACCTATGATGCTGTTCAGAATGTGCA
TTCTGTGTGGACTCTCAGGAGGGTAAAGCCAGAGGAAGAGACTGCTGTTTTAAAGTTCCCTGAG
CAGGCAGGGACCCTGCAGAATGCAGCCACTAGCAGCTCCCTGACAGCACATCTCAGAAGCCTCT
CCAAAGGCGAGTCCCCTGTTGCTTCGCCGTTCCAGAATTACTCTTCCATTCACAGCCAGAGCCG
CTCAGCCTCCTCACCCAGCCTACACTCCCGGTCGCCTTCCATTTCCAACATGGCGGCTCTAAGT
CGTGCTCACTCTCCTGCCTTAGGTGTGCACTCTTTCTCAGGGGTGCAAAGATTCAACCTTTCAA
GCCACAATCAGTCACCAAAGAGACACAGTATTTCCCACTCTCCGAGTGGCAGTTTCAACGATTC
ATTTTTGGCACCAGAAACAGAGCCAATTGTTCCTGAGCTTTGCATTGACCACTTGTGGACTGAG
ACACTTCCGAATATGAGAGAGAAAAATTCTCAGGCCTCCAAGGTATTTATAACGACTGACCTGT
GTGGACAGAAGTTCCTGTGCTTTTTAGTGGAGGCCCAGCTTCAGTTACGCTGTGTAAAGTTTCA
AGAGAGTAATGACAAGACTCAGCTTATCTTTGGCTCTGTCACCAACATACATGCAAAAGACGCA
GCCCCAGTGGAGAAGATAGACACCATGTTGGTACTCGAAGGCAATGGGAATCTGGTGCTGTACA
CAGGAGTGGTTCGGGTGGGGAAAGTGTTTATTCCTGGACTTCCAGCTCCTTCCCTGACAATGTC
CAACATGATGCCTCGGCCCAGTACCCCACTCGATGGTGTTAGCACTCCGAAGCCTCTTAGCAAA
TTACTTGGATCAATGGATGAGGTGGTTCTTCTGTCTCCAGTTCCAGAATTGAGGGATTCTTCAA
AACTTAACGATTCTCTCTACAATGAGGATTGTACATTCCAGCAGCTTGGAACTTACATTCATTC
AGTGCGAGACCCTGTTCATAACAGAGTCACTCTAGAACTGAGCAACGGCTCCATGGTTAGGATC
ACTATCCCTGAAGTGGCCACCTCGGAATTAGTGCAAACGTGTCTGCAAGCAATTAAGTTCATCC
TGCCGAAAGAAGTAGCAGTTCAGGTGCTCGTCAAGTGGTACAATGTGCACAGTGCTCCGGGAGG
ACCCAGTTGTCACTCAGAGTGGAGTTTATTTGTGATTTGTCTCTTGAACATGATGGGTTATAAC
ACAGACCGCTTAGCATGGACGCGAAGTTTCGACTTTGAAGGATCACTTTCCCCAGTCATTGCAC
CCAAAAAAGCGAGGCCCTCTGATACTGGGTCTGACGATGACTGGGAGTACTTACTGAATTCAGA
GTACCATCATAATGTTGAGTCTCATCTTTTGAACAAATCTCTATGTTTGAATGCTTTGGAAGTT
ACAAAGACAAAAGATGAAGATTTTCCACAAAACCTCAGTCTGGATTCTTCTACTCTTCTCTTTG
CTCACATTCCTGCAATTTTTTTTGTTCTTCACCTGGTTTATGAAGAGCTTAAGTTAAATACTCT
AATGGGAGAAGGAATTTGTTCTCTAATTGACCTCCTTGTTCAGTTGGCAAGGGACTTAAAATTG
GAGCCTTACTTGGACCATTACTACAGAGATTACCCAACTCTTGTCAAAACTACTGGACAAGTGT
GTACCATTGACCAAGGTCAGATGGGATTTATGCATCATCCCTCATTTTTTACTTCCGAGCCACC
AAGTATTTATCAGTGGGTGAGTTCGTGCCTGAAGGGCGAAGGAACGCCACCCTATCCCTACCTC
CCTGGGATCTGCGAGAGGAGCAGGCTGGTGGTCTTGAGTATTGCCCTCTACACCCTTGGTGATG
AGAGTTGTGTTTCTGATGAAACCTCCCAGTATTTATCCAAAGTAACCTTAACTCCCCAAAAGCC
ACAAGCAGAACAAGAAGAAAACAGGTTTACTTTCCGGCAGTCTGCTTCTGTGTCTGTTCTGGCT
GAGAGACTGGTTGTCTGGATGGCCAGTGTAGGATTCACTTTAAGAGATCTGGAGACTCTTCCCT
TTGGGATTGCTCTTCCCATCAGAGATGCAATCTACCACTGTCGGGAGCAGCCTGATTCAGATTG
GTCAGAAGCCGTCTGTCTCCTGATTGGACGTCAGGACCTTTCCAAGCAGGCTTGCGAAGGAAAT
TTACCCAGAGGCAAATCTGTGCTCTCATCAGATGTGGCTTCAGGAGCTGAGGCTGAGGAGGAAG
ACGATGGCATGAATGACTTGAACCATGAGGTTATGTCATTAATATGGAGTGAAGATTTACGGGT
GCAGGATGTGCGAAGGCTACTTCAAAGTGCACAGCCTGTCCGTGTCAATGTGGTACAGTACCCA
GAACTCAGTGACCATGAGTTCATTGAGGAAAAAGAAAACAGGCTGCTCCAGTTGTGTCAGCGAA
CTATGGCCCTTCCAGTAGGACGAGGGATGTTTACCTTGTTCTCATACCATCCTGTTCCAACAGA
GCCGTTGCCCATTCCTAAATTGAATCTGACAGGGCGAGCCCCTCCGAGAAACACAACTGTAGAT
CTTAATAGTGGGAACATCGATGTGCCTCCCAATATGGCAAGTTGGGCCAGCTTTCATAATGGTG
TGGCTGCTGGCCTGAAGATAGCCCCTGCCTCCCAGATAGACTCAGCTTGGATTGTTTACAACAA
GCCAAAGCATGCTGAGTTAGCCAATGAGTACGCAGGCTTTCTCATGGCCCTAGGTCTGAATGGG
CACCTTACCAAGCTGGCTACTCTCAATATCCATGACTACTTGACCAAGGGCCATGAAATGACAA
GCATTGGATTGCTACTTGGTGTTTCTGCTGCAAAACTTGGCACCATGGACATGTCAATTACCCG
GCTTCTTAGCATTCACGTTCCTGCTCTCTTACCCCCGACATCCACAGAGCTTGATGTGCCTCAC
AATGTCCAAGTGGCGGCTGTGGTTGGCATTGGCCTTGTTTATCAAGGCACAGCTCACAGACATA
CTGCAGAAGTCCTGTTGGCTGAAATAGGGCGGCCCCCTGGTCCAGAAATGGAATATTGCACTGA
CAGAGAATCCTACTCCTTAGCTGCTGGCCTGGCCCTGGGCATGGTTTGCTTGGGGCATGGCAGC
AATTTGATTGGCATGTCTGACCTCAATGTGCCTGAGCAGCTGTATCAGTACATGGTCGGAGGTC
ACAGGCGTTTTCAAACTGGAATGCACAGGGAGAAACATAAGTCTCCAAGTTACCAGATCAAAGA
AGGAGATACCATAAACGTGGACGTGACTTGTCCAGGCGCTACTCTGGCTCTGGCTATGATCTAC
TTGAAAACCAATAACAGATCTATTGCTGATTGGCTGCGAGCTCCTGATACCATGTATTTGCTCG
ACTTTGTGAAACCAGAGTTCCTCTTGCTTAGGACACTTGCTCGGTGCCTGATCCTGTGGGATGA
CATTTTACCGAATTCCAAGTGGGTTGACAGCAATGTTCCTCAGATTATAAGAGAAAATAGTATC
TCTCTGAGTGAGATTGAATTGCCTTGTTCAGAGGACTTGAATTTGGAAACCTTGTCGCAAGCAC
ACGTCTACATCATCGCAGGAGCCTGCTTGTCTCTGGGTTTTCGATTTGCTGGCTCAGAGAACTT
ATCAGCATTTAACTGTCTGCATAAATTTGCAAAAGATTTTATGAATTATTTATCTGCACCCAAT
GCTTCTGTAACAGGGCCCTACAACCTCGAAACCTGCCTGAGTGTTGTCCTGCTGTCTCTTGCCA
TGGTGATGGCTGGCTCTGGGAACCTGAAGGTGTTGCAGCTCTGCCGCTTCCTGCATATGAAGAC
GGGCGGAGAGATGAACTATGGCTTCCACTTGGCCCACCACATGGCCCTGGGCCTTCTCTTTTTG
GGAGGAGGAAGGTACTCTTTGAGCACATCCAACTCATCCATTGCTGCCCTTCTCTGTGCCCTTT
ACCCACATTTCCCAGCCCACAGCACTGACAACCGGTATCATCTCCAGGCCCTTCGGCACCTCTA
CGTGCTGGCTGCAGAACCAAGGCTCCTGGTGCCTGTGGATGTGGATACAAACACACCCTGCTAT
GCCCTTATAGAAGTTACTTACAAGGGCACTCAGTGGTATGAACAGACCAAAGAAGAACTGATGG
CTCCAACCCTGCTTCCAGAACTCCATCTTCTAAAGCAGATGAAGGTTAAAGGGCCAAGATACTG
GGAACTGCTCATAGATTTAAGCAAGGGAGAGCAGCACTTGAGGTCCATTCTTTCCAAGGATGGA
GTTTTATATGTAAAGCTCAGGGCAGGCCAGCTCTCCTACAAAGAAGACCCAATGGGGTGGCAGA
GTCTGTTGGCACAGACTGTGGCTAACAGGAACTCAGAGGCCCGGGCTTTCAAGCCAGAAACAAT
TTCATCATTCACTTCTGATCCAGCACTTCTGTCATTTGCTGAATATTTCTGCAAGCCGACTGTG
AGCATGGGCCAAAAACAGGAGATTCTGGACCTCTTTTCTTCCATACTTTATGAGTGTGTTGCTC
AGGAAACTCCAGAGATGTTGCCTGCCTACATAGCAATGGATCAGGCTTTAAGAAGTCTTAAAAA
GAGAGACATGTCGAACACATCTGATCTTTGGCAGATAAAGTTGATATTAGAGTTTTTCAGTTCA
CGAAGCCACCAGGAAAGGCAGCAGACCTATCCTAAGCGAGGGCTCTTCATAAACTCGGAGTTCC
TACCTGTGGTGAAGTGCACTGTTGATTCCACCCTGGACCAGTGGCTACAAGCTGGAGGCGATGT
GTGTGTGCATGCCTACCTTAGTGGGCAGCCTGTTGAGAAGTCTCAGCTAAACATGCTGGCCTGC
TTCCTGGTCTACCACTCTGTGCCAGCACCGCGACACTTGCCACCCCTGGGACTGGAAGGGAGCA
CAAGCTTTGCTGAACTCCTCTTCAGGTTCAGACACCTAAAAATGCCAGTCCGCGCTTTGCTGAG
ACTGGCTCCTGTGCTGCTCGGGAATCCACAGCCGATGGTTATGTGACCGACCACCTCCGGCGGT
AAACCTACCCCCAAAAACCACTGCGGCGCAGAATCCTGATGGCAGCAAAGTTACGGCAGCATTT
CTGTTTTGTGACCAACGGAGCTCAGATGCATACGCCTCACTGTGTTTAAAACCCATGTTGAAAA
TATTACAGATAACGCTGGTGCTGTCCATATGTCATATGATGTATAAAAAGTCAGTTAAAACTCA
CTTTTATAAATAAAGATTTTTGGTTTGTTTTCGAAGCTATTGATGATTGCTTTGGACTTCAGAG
AATAAATGGACAGGCTGAGTTTTGAAGCCTTTGAACTTTAGTGGTTCTGTACTCAGAAAAAGCC
ACATCGCGAGAGTGGACTTTCTGCTACCCCAGGAGAGTTTCTGTGTTGTCTGTTACGTGCTTCC
CATGGTGGATGATGTCTTTACTGCGAGCAGATTTCTACTTAATGAAGACTTGCTCAGCATGGAG
TACTGGACCATGCCCAAGCCCTGCCTTTGTACAGCTATGTAGGCTGCAGCTCTTTGGAGATAAC
CAAGGTTAAAGGATAATTAAGGGTGAGTCCCTGTTTTGTAGACTTGATGGCCTGTTCAGAAGAG
GAAGAGATGTCTTCTCTCTGCACCTTGTGAGAACTCATAGCACAGCTGCTCACAAGCCAAGAAG
ATTCCTTTGTGAGGAACCAGTCAGAAGGTCTTGGACTTCTGCACCTACGAGTATAAGAAATAAA
TTCCTGATGCTTAAGCCATCCTATCTTGTCTGTGGTACTTGGTTTTGCAGCCTGTGCAGACTAG
TGCACGACACCTGCTCAAAATACCTAAATACAAAGTTACCCCACAGAGGAGTGTTAAAATATTT
TTAAAGGCAGAAGTCAGTCTATCTGGAAAGTGCTTTTGTACAGGTTAGCTCATGATGGCCATGT
GACAGGAAGAGTGTTCCTACTGTGCTCACAGCTTCTCAGACAAGTGGGACTGTGAACAAGGAGG
AACAGCAAACTGCACACTCACTGGTTTCCTGCTTGTTTCTGAAAAAGCCAATAGAAATTGCTCC
GCTGGGATTTGGTAATGTCCGTCTGCTCGTCTGCCTGCAGCAAGGTAATTTGTGGCTGACTTTT
AGGGCAAAATGTGTTTTCCTTCCCTCTTAGATTAAGGATTGCACTTAAGTGGCAAGGGGTGATG
AACGTTCAGTTTGCATCAACATCGAACCCACCGTCCAAGTAATTTTTCACTCTCAGTTGTTATG
GTGGCCATGGGAGGACTTGAAAGAGAGCACTGACTACAGTGGAAGCAGCATTGATGGGCACCAA
GAAGAGATTCTAGTGCCCCTGAGTCAGCATGTTAGCATCATCAGATAAACTAGTATATTTACCA
TCCTGTGGGAACCAGTCTTACCAAACACAGCAGCTGCCTCCTGGGAACCACATCGAGGGGAGAG
TCAGAGAAACACCTGGCAGTGAAGTATTCTAATATCAGAAGTGGCACTTGTGACTTCAAGGGAA
GGCTGACTACCCAGGATTGCTTCACGTCTGATGCGTGTGGAATGGGGACTCAAGGTGTAGCCGC
TTTGAGTGCAGGTACTGTCCAGCAGACAGACAATTGAGCATGTACTCAGATTCTTCCCCCAAAG
GGTACTGACGTCTGCTCCTCCCTCAAGGTCTGATGTGGGAGCCAAGGCAATGAGCTCAGATGCC
AGACTTGAGCTACACTGCTTCATCGTAGTCCTCAACATTCTGGGCTTTACCCAGTCTGCTACAC
CCAACCCTGCTCCAGTCTGCTGCTGCCTGTGTGGATTCTGAGTCCAAGAGAATCAGAAACAGCT
CCTCAGTGTGAACTGAAAGGACTTAGCATTGACAGAACTTGTGAACCGGCCGAAAAGCAGGCAA
ACATCTTTGTAATCACAGGGGTTTTTGTGCGTTTTCTTGATGTTTCTCCCATTGACTTAGTCTG
TCACTATTGATCACATTATATAGAGCATCTTGTTCAAGTTTTGTTTTTTAGCTAAAAACACTTC
TTTGGTAAACTTTTAATACTGTAATTTTTTTCCTCTAGAATATTTTCGAGTGTACTTTTAAGAC
TCTTTTTCCCTTGAAACATATCAGAATTTTAAAACAGGAATTTCATAATAAATTTAGTAAGATT
TATAAGCACCTGCCAGATCTTAATTCCTGTTCTTTTATACTCCAATGCTTAGCTGAGCTGTTAG
CTTTTCTCTGTAGCTAATGGATGTCTCAAGTCTCTGCCTTGTGAGGCTGCAGACCATGTGTTTT
AAAAACTCAAGATGTGGGGCTAGAGGCATGGCTCAGTGGTTAAAAGCACTGACTGCTCTTCCAG
AGAGATCCTGAGTTCAATTCCCAGCAACCACATGGTGGCTCACAGCTATCTGTAATGGGATCTG
ATGCCCTCTTCTGGTGCGTCTGAAGAGAATGGCATACATAAAATCTTAAAAGAATTCAAGACAT
GTTGGGTCATGATGTCATGGTCACCTTATAGGTGGAGGGTAGGTACCTAAAACAAGGACAAAAG
CCAGAAGCTAGTGTTGATAATTTCCTTCTGGTTGAAGGAGGAGGGGAGGCTCAAGACATTAAGC
TTCACATGTCTTGGAAAGCTGAAGCCCAAGAGCCACAAAGTGCTTCCCCAAGGTTGTAGAAATG
GACAGGACAGAAGGGGACAGGTTGACTGTTAGCAGCAGAGCTCCCCAGAGGAGGCCTGGCTGCC
TGGGAGGCGATTCCCTGACTAGTCAAACAGCCTGCAAGTTGTGTAGAGTTGTTCTTGTTGAGGT
GGGCTTTAGGTGATACAGATGCTTCTGAGTCATTCCTGTTCTTGGAACACCACCAGCCCCTATT
CTTATAAGTGACCCCAATAAACTCATTGAATTGCTAA

hide sequence

RefSeq Acc Id:

XM_008762177 ⟹ XP_008760399

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	136,303,350 - 136,383,147 (-)	NCBI
mRatBN7.2	3	115,850,117 - 115,930,259 (-)	NCBI
Rnor_6.0	3	121,147,484 - 121,225,889 (-)	NCBI

Sequence:

show sequence

CGGCCGGGTAGCGCATCACTGCAACTTGGTGTTGGAATTTCGATGCACCGGGTGACCCAACGGC
TGAGCGCTCTGGGGCGGGCCTTGAGAGCGTGCTGGGAAATAATGTTGATATTTGGAACCCATGT
CGAACTTCTCTGAAGAAAGGGCAACGATGATTGCAGCCGGGGATCTGCAGGAATTCGTTCCTTT
TGGTCGAGACCACTGCAAGCACCACCCTAATGCTCTGAACCTTCAGCTTCGTCAGCTGCAGCCA
GCTTCTGAGTTATGGTCTTCCGATGGTGCAGCTGGCTTGGTGGGATCTCTTCAGGAGGTTACGA
TCCATGAGAAACAGAAGGAAAGCTGGCAGTTAAGAAAAGGCGTGAGCGAGATTGGAGATGCAGC
CGACTATGATGAAGAGCTCTATGTGGCTGGGAACATGGTTATCTGGAGCAAAGGGAGTAAAAGC
CAGGCCTTGGCAGTGTACAAAGCCTTCACAGTGGACAGCACTGTTCAGCAGGCATTGTGGTGTG
ACTTCATTATATCACAGGATAAGTCCGAAAAGATCTATAAGAGCCATGAACTAGAGAAATGCAT
ATGTATATTACAGAGCTCGTGTATGAACATGCACAGCATAGACGGGAAGGATTACATAGCTTCC
TTACCATTTCAGGTGGCAAACGTGTGGGCCACTAAGTATGGCTTGCTGTTTGAACGAAGCAGTT
CTTCACATGAGGTGCCTCCAAGTCTACCTAGAGAGCCTTTGCCTACCATGTTCAGCATGCTGCA
CCCTCTGGATGAGATAACTCCACTTGTTTGTAAATCCGGAAGTCTTTTTGGCTCATCGCGGGTG
CAGTATGTTGTAGATCCAGCAGTGAAAATTGTGTTTCTGAACATTGACCCCTCCATTGTAATGA
CCTATGATGCTGTTCAGAATGTGCATTCTGTGTGGACTCTCAGGAGGGTAAAGCCAGAGGAAGA
GACTGCTGTTTTAAAGTTCCCTGAGCAGGCAGGGACCCTGCAGAATGCAGCCACTAGCAGCTCC
CTGACAGCACATCTCAGAAGCCTCTCCAAAGGCGAGTCCCCTGTTGCTTCGCCGTTCCAGAATT
ACTCTTCCATTCACAGCCAGAGCCGCTCAGCCTCCTCACCCAGCCTACACTCCCGGTCGCCTTC
CATTTCCAACATGGCGGCTCTAAGTCGTGCTCACTCTCCTGCCTTAGGTGTGCACTCTTTCTCA
GGGGTGCAAAGATTCAACCTTTCAAGCCACAATCAGTCACCAAAGAGACACAGTATTTCCCACT
CTCCGAGTGGCAGTTTCAACGATTCATTTTTGGCACCAGAAACAGAGCCAATTGTTCCTGAGCT
TTGCATTGACCACTTGTGGACTGAGACACTTCCGAATATGAGAGAGAAAAATTCTCAGGCCTCC
AAGGTATTTATAACGACTGACCTGTGTGGACAGAAGTTCCTGTGCTTTTTAGTGGAGGCCCAGC
TTCAGTTACGCTGTGTAAAGTTTCAAGAGAGTAATGACAAGACTCAGCTTATCTTTGGCTCTGT
CACCAACATACATGCAAAAGACGCAGCCCCAGTGGAGAAGATAGACACCATGTTGGTACTCGAA
GGCAATGGGAATCTGGTGCTGTACACAGGAGTGGTTCGGGTGGGGAAAGTGTTTATTCCTGGAC
TTCCAGCTCCTTCCCTGACAATGTCCAACATGATGCCTCGGCCCAGTACCCCACTCGATGGTGT
TAGCACTCCGAAGCCTCTTAGCAAATTACTTGGATCAATGGATGAGGTGGTTCTTCTGTCTCCA
GTTCCAGAATTGAGGGATTCTTCAAAACTTAACGATTCTCTCTACAATGAGGATTGTACATTCC
AGCAGCTTGGAACTTACATTCATTCAGTGCGAGACCCTGTTCATAACAGAGTCACTCTAGAACT
GAGCAACGGCTCCATGGTTAGGATCACTATCCCTGAAGTGGCCACCTCGGAATTAGTGCAAACG
TGTCTGCAAGCAATTAAGTTCATCCTGCCGAAAGAAGTAGCAGTTCAGGTGCTCGTCAAGTGGT
ACAATGTGCACAGTGCTCCGGGAGGACCCAGTTGTCACTCAGAGTGGAGTTTATTTGTGATTTG
TCTCTTGAACATGATGGGTTATAACACAGACCGCTTAGCATGGACGCGAAGTTTCGACTTTGAA
GGATCACTTTCCCCAGTCATTGCACCCAAAAAAGCGAGGCCCTCTGATACTGGGTCTGACGATG
ACTGGGAGTACTTACTGAATTCAGAGTACCATCATAATGTTGAGTCTCATCTTTTGAACAAATC
TCTATGTTTGAATGCTTTGGAAGTTACAAAGACAAAAGATGAAGATTTTCCACAAAACCTCAGT
CTGGATTCTTCTACTCTTCTCTTTGCTCACATTCCTGCAATTTTTTTTGTTCTTCACCTGGTTT
ATGAAGAGCTTAAGTTAAATACTCTAATGGGAGAAGGAATTTGTTCTCTAATTGACCTCCTTGT
TCAGTTGGCAAGGGACTTAAAATTGGAGCCTTACTTGGACCATTACTACAGAGATTACCCAACT
CTTGTCAAAACTACTGGACAAGTGTGTACCATTGACCAAGGTCAGATGGGATTTATGCATCATC
CCTCATTTTTTACTTCCGAGCCACCAAGTATTTATCAGTGGGTGAGTTCGTGCCTGAAGGGCGA
AGGAACGCCACCCTATCCCTACCTCCCTGGGATCTGCGAGAGGAGCAGGCTGGTGGTCTTGAGT
ATTGCCCTCTACACCCTTGGTGATGAGAGTTGTGTTTCTGATGAAACCTCCCAGTATTTATCCA
AAGTAACCTTAACTCCCCAAAAGCCACAAGCAGAACAAGAAGAAAACAGGTTTACTTTCCGGCA
GTCTGCTTCTGTGTCTGTTCTGGCTGAGAGACTGGTTGTCTGGATGGCCAGTGTAGGATTCACT
TTAAGAGATCTGGAGACTCTTCCCTTTGGGATTGCTCTTCCCATCAGAGATGCAATCTACCACT
GTCGGGAGCAGCCTGATTCAGATTGGTCAGAAGCCGTCTGTCTCCTGATTGGACGTCAGGACCT
TTCCAAGCAGGCTTGCGAAGGAAATTTACCCAGAGGCAAATCTGTGCTCTCATCAGATGTGGCT
TCAGGAGCTGAGGCTGAGGAGGAAGACGATGGCATGAATGACTTGAACCATGAGGTTATGTCAT
TAATATGGAGTGAAGATTTACGGGTGCAGGATGTGCGAAGGCTACTTCAAAGTGCACAGCCTGT
CCGTGTCAATGTGGTACAGTACCCAGAACTCAGTGACCATGAGTTCATTGAGGAAAAAGAAAAC
AGGCTGCTCCAGTTGTGTCAGCGAACTATGGCCCTTCCAGTAGGACGAGGGATGTTTACCTTGT
TCTCATACCATCCTGTTCCAACAGAGCCGTTGCCCATTCCTAAATTGAATCTGACAGGGCGAGC
CCCTCCGAGAAACACAACTGTAGATCTTAATAGTGGGAACATCGATGTGCCTCCCAATATGGCA
AGTTGGGCCAGCTTTCATAATGGTGTGGCTGCTGGCCTGAAGATAGCCCCTGCCTCCCAGATAG
ACTCAGCTTGGATTGTTTACAACAAGCCAAAGCATGCTGAGTTAGCCAATGAGTACGCAGGCTT
TCTCATGGCCCTAGGTCTGAATGGGCACCTTACCAAGCTGGCTACTCTCAATATCCATGACTAC
TTGACCAAGGGCCATGAAATGACAAGCATTGGATTGCTACTTGGTGTTTCTGCTGCAAAACTTG
GCACCATGGACATGTCAATTACCCGGCTTCTTAGCATTCACGTTCCTGCTCTCTTACCCCCGAC
ATCCACAGAGCTTGATGTGCCTCACAATGTCCAAGTGGCGGCTGTGGTTGGCATTGGCCTTGTT
TATCAAGGCACAGCTCACAGACATACTGCAGAAGTCCTGTTGGCTGAAATAGGGCGGCCCCCTG
GTCCAGAAATGGAATATTGCACTGACAGAGAATCCTACTCCTTAGCTGCTGGCCTGGCCCTGGG
CATGGTTTGCTTGGGGCATGGCAGCAATTTGATTGGCATGTCTGACCTCAATGTGCCTGAGCAG
CTGTATCAGTACATGGTCGGAGGTCACAGGCGTTTTCAAACTGGAATGCACAGGGAGAAACATA
AGTCTCCAAGTTACCAGATCAAAGAAGGAGATACCATAAACGTGGACGTGACTTGTCCAGGCGC
TACTCTGGCTCTGGCTATGATCTACTTGAAAACCAATAACAGATCTATTGCTGATTGGCTGCGA
GCTCCTGATACCATGTATTTGCTCGACTTTGTGAAACCAGAGTTCCTCTTGCTTAGGACACTTG
CTCGGTGCCTGATCCTGTGGGATGACATTTTACCGAATTCCAAGTGGGTTGACAGCAATGTTCC
TCAGATTATAAGAGAAAATAGTATCTCTCTGAGTGAGATTGAATTGCCTTGTTCAGAGGACTTG
AATTTGGAAACCTTGTCGCAAGCACACGTCTACATCATCGCAGGAGCCTGCTTGTCTCTGGGTT
TTCGATTTGCTGGCTCAGAGAACTTATCAGCATTTAACTGTCTGCATAAATTTGCAAAAGATTT
TATGAATTATTTATCTGCACCCAATGCTTCTGTAACAGGGCCCTACAACCTCGAAACCTGCCTG
AGTGTTGTCCTGCTGTCTCTTGCCATGGTGATGGCTGGCTCTGGGAACCTGAAGGTGTTGCAGC
TCTGCCGCTTCCTGCATATGAAGACGGGCGGAGAGATGAACTATGGCTTCCACTTGGCCCACCA
CATGGCCCTGGGCCTTCTCTTTTTGGGAGGAGGAAGGTACTCTTTGAGCACATCCAACTCATCC
ATTGCTGCCCTTCTCTGTGCCCTTTACCCACATTTCCCAGCCCACAGCACTGACAACCGGTATC
ATCTCCAGGCCCTTCGGCACCTCTACGTGCTGGCTGCAGAACCAAGGCTCCTGGTGCCTGTGGA
TGTGGATACAAACACACCCTGCTATGCCCTTATAGAAGTTACTTACAAGGGCACTCAGTGGTAT
GAACAGACCAAAGAAGAACTGATGGCTCCAACCCTGCTTCCAGAACTCCATCTTCTAAAGCAGA
TGAAGGTTAAAGGGCCAAGATACTGGGAACTGCTCATAGATTTAAGCAAGGGAGAGCAGCACTT
GAGGTCCATTCTTTCCAAGGATGGAGTTTTATATGTAAAGCTCAGGGCAGGCCAGCTCTCCTAC
AAAGAAGACCCAATGGGGTGGCAGAGTCTGTTGGCACAGACTGTGGCTAACAGGAACTCAGAGG
CCCGGGCTTTCAAGCCAGAAACAATTTCATCATTCACTTCTGATCCAGCACTTCTGTCATTTGC
TGAATATTTCTGCAAGCCGACTGTGAGCATGGGCCAAAAACAGGAGATTCTGGACCTCTTTTCT
TCCATACTTTATGAGTGTGTTGCTCAGGAAACTCCAGAGATGTTGCCTGCCTACATAGCAATGG
ATCAGGCTTTAAGAAGTCTTAAAAAGAGAGACATGTCGAACACATCTGATCTTTGGCAGATAAA
GTTGATATTAGAGTTTTTCAGTTCACGAAGCCACCAGGAAAGGCAGCAGACCTATCCTAAGCGA
GGGCTCTTCATAAACTCGGAGTTCCTACCTGTGGTGAAGTGCACTGTTGATTCCACCCTGGACC
AGTGGCTACAAGCTGGAGGCGATGTGTGTGTGCATGCCTACCTTAGTGGGCAGCCTGTTGAGAA
GTCTCAGCTAAACATGCTGGCCTGCTTCCTGGTCTACCACTCTGTGCCAGCACCGCGACACTTG
CCACCCCTGGGACTGGAAGGGAGCACAAGCTTTGCTGAACTCCTCTTCAGGTTCAGACACCTAA
AAATGCCAGTCCGCGCTTTGCTGAGACTGGCTCCTGTGCTGCTCGGGAATCCACAGCCGATGGT
TATGTGACCGACCACCTCCGGCGGTAAACCTACCCCCAAAAACCACTGCGGCGCAGAATCCTGA
TGGCAGCAAAGTTACGGCAGCATTTCTGTTTTGTGACCAACGGAGCTCAGATGCATACGCCTCA
CTGTGTTTAAAACCCATGTTGAAAATATTACAGATAACGCTGGTGCTGTCCATATGTCATATGA
TGTATAAAAAGTCAGTTAAAACTCACTTTTATAAATAAAGATTTTTGGTTTGTTTTCGAAGCTA
TTGATGATTGCTTTGGACTTCAGAGAATAAATGGACAGGCTGAGTTTTGAAGCCTTTGAACTTT
AGTGGTTCTGTACTCAGAAAAAGCCACATCGCGAGAGTGGACTTTCTGCTACCCCAGGAGAGTT
TCTGTGTTGTCTGTTACGTGCTTCCCATGGTGGATGATGTCTTTACTGCGAGCAGATTTCTACT
TAATGAAGACTTGCTCAGCATGGAGTACTGGACCATGCCCAAGCCCTGCCTTTGTACAGCTATG
TAGGCTGCAGCTCTTTGGAGATAACCAAGGTTAAAGGATAATTAAGGGTGAGTCCCTGTTTTGT
AGACTTGATGGCCTGTTCAGAAGAGGAAGAGATGTCTTCTCTCTGCACCTTGTGAGAACTCATA
GCACAGCTGCTCACAAGCCAAGAAGATTCCTTTGTGAGGAACCAGTCAGAAGGTCTTGGACTTC
TGCACCTACGAGTATAAGAAATAAATTCCTGATGCTTAAGCCATCCTATCTTGTCTGTGGTACT
TGGTTTTGCAGCCTGTGCAGACTAGTGCACGACACCTGCTCAAAATACCTAAATACAAAGTTAC
CCCACAGAGGAGTGTTAAAATATTTTTAAAGGCAGAAGTCAGTCTATCTGGAAAGTGCTTTTGT
ACAGGTTAGCTCATGATGGCCATGTGACAGGAAGAGTGTTCCTACTGTGCTCACAGCTTCTCAG
ACAAGTGGGACTGTGAACAAGGAGGAACAGCAAACTGCACACTCACTGGTTTCCTGCTTGTTTC
TGAAAAAGCCAATAGAAATTGCTCCGCTGGGATTTGGTAATGTCCGTCTGCTCGTCTGCCTGCA
GCAAGGTAATTTGTGGCTGACTTTTAGGGCAAAATGTGTTTTCCTTCCCTCTTAGATTAAGGAT
TGCACTTAAGTGGCAAGGGGTGATGAACGTTCAGTTTGCATCAACATCGAACCCACCGTCCAAG
TAATTTTTCACTCTCAGTTGTTATGGTGGCCATGGGAGGACTTGAAAGAGAGCACTGACTACAG
TGGAAGCAGCATTGATGGGCACCAAGAAGAGATTCTAGTGCCCCTGAGTCAGCATGTTAGCATC
ATCAGATAAACTAGTATATTTACCATCCTGTGGGAACCAGTCTTACCAAACACAGCAGCTGCCT
CCTGGGAACCACATCGAGGGGAGAGTCAGAGAAACACCTGGCAGTGAAGTATTCTAATATCAGA
AGTGGCACTTGTGACTTCAAGGGAAGGCTGACTACCCAGGATTGCTTCACGTCTGATGCGTGTG
GAATGGGGACTCAAGGTGTAGCCGCTTTGAGTGCAGGTACTGTCCAGCAGACAGACAATTGAGC
ATGTACTCAGATTCTTCCCCCAAAGGGTACTGACGTCTGCTCCTCCCTCAAGGTCTGATGTGGG
AGCCAAGGCAATGAGCTCAGATGCCAGACTTGAGCTACACTGCTTCATCGTAGTCCTCAACATT
CTGGGCTTTACCCAGTCTGCTACACCCAACCCTGCTCCAGTCTGCTGCTGCCTGTGTGGATTCT
GAGTCCAAGAGAATCAGAAACAGCTCCTCAGTGTGAACTGAAAGGACTTAGCATTGACAGAACT
TGTGAACCGGCCGAAAAGCAGGCAAACATCTTTGTAATCACAGGGGTTTTTGTGCGTTTTCTTG
ATGTTTCTCCCATTGACTTAGTCTGTCACTATTGATCACATTATATAGAGCATCTTGTTCAAGT
TTTGTTTTTTAGCTAAAAACACTTCTTTGGTAAACTTTTAATACTGTAATTTTTTTCCTCTAGA
ATATTTTCGAGTGTACTTTTAAGACTCTTTTTCCCTTGAAACATATCAGAATTTTAAAACAGGA
ATTTCATAATAAATTTAGTAAGATTTATAAGCACCTGCCAGATCTTAATTCCTGTTCTTTTATA
CTCCAATGCTTAGCTGAGCTGTTAGCTTTTCTCTGTAGCTAATGGATGTCTCAAGTCTCTGCCT
TGTGAGGCTGCAGACCATGTGTTTTAAAAACTCAAGATGTGGGGCTAGAGGCATGGCTCAGTGG
TTAAAAGCACTGACTGCTCTTCCAGAGAGATCCTGAGTTCAATTCCCAGCAACCACATGGTGGC
TCACAGCTATCTGTAATGGGATCTGATGCCCTCTTCTGGTGCGTCTGAAGAGAATGGCATACAT
AAAATCTTAAAAGAATTCAAGACATGTTGGGTCATGATGTCATGGTCACCTTATAGGTGGAGGG
TAGGTACCTAAAACAAGGACAAAAGCCAGAAGCTAGTGTTGATAATTTCCTTCTGGTTGAAGGA
GGAGGGGAGGCTCAAGACATTAAGCTTCACATGTCTTGGAAAGCTGAAGCCCAAGAGCCACAAA
GTGCTTCCCCAAGGTTGTAGAAATGGACAGGACAGAAGGGGACAGGTTGACTGTTAGCAGCAGA
GCTCCCCAGAGGAGGCCTGGCTGCCTGGGAGGCGATTCCCTGACTAGTCAAACAGCCTGCAAGT
TGTGTAGAGTTGTTCTTGTTGAGGTGGGCTTTAGGTGATACAGATGCTTCTGAGTCATTCCTGT
TCTTGGAACACCACCAGCCCCTATTCTTATAAGTGACCCCAATAAACTCATTGAATTGCTAA

hide sequence

RefSeq Acc Id:

XM_063283753 ⟹ XP_063139823

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	136,303,350 - 136,380,470 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_001101241	(Get FASTA)	NCBI Sequence Viewer
	XP_006235035	(Get FASTA)	NCBI Sequence Viewer
	XP_008760399	(Get FASTA)	NCBI Sequence Viewer
	XP_063139823	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDL80137	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000052727
	ENSRNOP00000052727.5
	ENSRNOP00000085653
	ENSRNOP00000085653.1
	ENSRNOP00000087529.1

RefSeq Acc Id:

NP_001101241 ⟸ NM_001107771

- UniProtKB:

A6HQ36 (UniProtKB/TrEMBL), A0A8I6A4J8 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MSNFSEERATMIAAGDLQEFVPFGRDHCKHHPNALNLQLRQLQPASELWSSDGAAGLVGSLQEV
TIHEKQKESWQLRKGVSEIGDAADYDEELYVAGNMVIWSKGSKSQALAVYKAFTVDSTVQQALW
CDFIISQDKSEKIYKSHELEKCICILQSSCMNMHSIDGKDYIASLPFQVANVWATKYGLLFERS
SSSHEVPPSLPREPLPTMFSMLHPLDEITPLVCKSGSLFGSSRVQYVVDPAVKIVFLNIDPSIV
MTYDAVQNVHSVWTLRRVKPEEETAVLKFPEQAGTLQNAATSSSLTAHLRSLSKGESPVASPFQ
NYSSIHSQSRSASSPSLHSRSPSISNMAALSRAHSPALGVHSFSGVQRFNLSSHNQSPKRHSIS
HSPSGSFNDSFLAPETEPIVPELCIDHLWTETLPNMREKNSQASKVFITTDLCGQKFLCFLVEA
QLQLRCVKFQESNDKTQLIFGSVTNIHAKDAAPVEKIDTMLVLEGNGNLVLYTGVVRVGKVFIP
GLPAPSLTMSNMMPRPSTPLDGVSTPKPLSKLLGSMDEVVLLSPVPELRDSSKLNDSLYNEDCT
FQQLGTYIHSVRDPVHNRVTLELSNGSMVRITIPEVATSELVQTCLQAIKFILPKEVAVQVLVK
WYNVHSAPGGPSCHSEWSLFVICLLNMMGYNTDRLAWTRSFDFEGSLSPVIAPKKARPSDTGSD
DDWEYLLNSEYHHNVESHLLNKSLCLNALEVTKTKDEDFPQNLSLDSSTLLFAHIPAIFFVLHL
VYEELKLNTLMGEGICSLIDLLVQLARDLKLEPYLDHYYRDYPTLVKTTGQVCTIDQGQMGFMH
HPSFFTSEPPSIYQWVSSCLKGEGTPPYPYLPGICERSRLVVLSIALYTLGDESCVSDETSQYL
SKVTLTPQKPQAEQEENRFTFRQSASVSVLAERLVVWMASVGFTLRDLETLPFGIALPIRDAIY
HCREQPDSDWSEAVCLLIGRQDLSKQACEGNLPRGKSVLSSDVASGAEAEEEDDGMNDLNHEVM
SLIWSEDLRVQDVRRLLQSAQPVRVNVVQYPELSDHEFIEEKENRLLQLCQRTMALPVGRGMFT
LFSYHPVPTEPLPIPKLNLTGRAPPRNTTVDLNSGNIDVPPNMASWASFHNGVAAGLKIAPASQ
IDSAWIVYNKPKHAELANEYAGFLMALGLNGHLTKLATLNIHDYLTKGHEMTSIGLLLGVSAAK
LGTMDMSITRLLSIHVPALLPPTSTELDVPHNVQVAAVVGIGLVYQGTAHRHTAEVLLAEIGRP
PGPEMEYCTDRESYSLAAGLALGMVCLGHGSNLIGMSDLNVPEQLYQYMVGGHRRFQTGMHREK
HKSPSYQIKEGDTINVDVTCPGATLALAMIYLKTNNRSIADWLRAPDTMYLLDFVKPEFLLLRT
LARCLILWDDILPNSKWVDSNVPQIIRENSISLSEIELPCSEDLNLETLSQAHVYIIAGACLSL
GFRFAGSENLSAFNCLHKFAKDFMNYLSAPNASVTGPYNLETCLSVVLLSLAMVMAGSGNLKVL
QLCRFLHMKTGGEMNYGFHLAHHMALGLLFLGGGRYSLSTSNSSIAALLCALYPHFPAHSTDNR
YHLQALRHLYVLAAEPRLLVPVDVDTNTPCYALIEVTYKGTQWYEQTKEELMAPTLLPELHLLK
QMKVKGPRYWELLIDLSKGEQHLRSILSKDGVLYVKLRAGQLSYKEDPMGWQSLLAQTVANRNS
EARAFKPETISSFTSDPALLSFAEYFCKPTVSMGQKQEILDLFSSILYECVAQETPEMLPAYIA
MDQALRSLKKRDMSNTSDLWQIKLILEFFSSRSHQERQQTYPKRGLFINSEFLPVVKCTVDSTL
DQWLQAGGDVCVHAYLSGQPVEKSQLNMLACFLVYHSVPAPRHLPPLGLEGSTSFAELLFRFRH
LKMPVRALLRLAPVLLGNPQPMVM

hide sequence

RefSeq Acc Id:	XP_006235035 ⟸ XM_006234973
- Peptide Label:	isoform X1
- UniProtKB:	A6HQ36 (UniProtKB/TrEMBL), A0A8I6A4J8 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSNFSEERATMIAAGDLQEFVPFGRDHCKHHPNALNLQLRQLQPASELWSSDGAAGLVGSLQEV TIHEKQKESWQLRKGVSEIGDAADYDEELYVAGNMVIWSKGSKSQALAVYKAFTVDSTVQQALW CDFIISQDKSEKIYKSHELEKCICILQSSCMNMHSIDGKDYIASLPFQVANVWATKYGLLFERS SSSHEVPPSLPREPLPTMFSMLHPLDEITPLVCKSGSLFGSSRVQYVVDPAVKIVFLNIDPSIV MTYDAVQNVHSVWTLRRVKPEEETAVLKFPEQAGTLQNAATSSSLTAHLRSLSKGESPVASPFQ NYSSIHSQSRSASSPSLHSRSPSISNMAALSRAHSPALGVHSFSGVQRFNLSSHNQSPKRHSIS HSPSGSFNDSFLAPETEPIVPELCIDHLWTETLPNMREKNSQASKVFITTDLCGQKFLCFLVEA QLQLRCVKFQESNDKTQLIFGSVTNIHAKDAAPVEKIDTMLVLEGNGNLVLYTGVVRVGKVFIP GLPAPSLTMSNMMPRPSTPLDGVSTPKPLSKLLGSMDEVVLLSPVPELRDSSKLNDSLYNEDCT FQQLGTYIHSVRDPVHNRVTLELSNGSMVRITIPEVATSELVQTCLQAIKFILPKEVAVQVLVK WYNVHSAPGGPSCHSEWSLFVICLLNMMGYNTDRLAWTRSFDFEGSLSPVIAPKKARPSDTGSD DDWEYLLNSEYHHNVESHLLNKSLCLNALEVTKTKDEDFPQNLSLDSSTLLFAHIPAIFFVLHL VYEELKLNTLMGEGICSLIDLLVQLARDLKLEPYLDHYYRDYPTLVKTTGQVCTIDQGQMGFMH HPSFFTSEPPSIYQWVSSCLKGEGTPPYPYLPGICERSRLVVLSIALYTLGDESCVSDETSQYL SKVTLTPQKPQAEQEENRFTFRQSASVSVLAERLVVWMASVGFTLRDLETLPFGIALPIRDAIY HCREQPDSDWSEAVCLLIGRQDLSKQACEGNLPRGKSVLSSDVASGAEAEEEDDGMNDLNHEVM SLIWSEDLRVQDVRRLLQSAQPVRVNVVQYPELSDHEFIEEKENRLLQLCQRTMALPVGRGMFT LFSYHPVPTEPLPIPKLNLTGRAPPRNTTVDLNSGNIDVPPNMASWASFHNGVAAGLKIAPASQ IDSAWIVYNKPKHAELANEYAGFLMALGLNGHLTKLATLNIHDYLTKGHEMTSIGLLLGVSAAK LGTMDMSITRLLSIHVPALLPPTSTELDVPHNVQVAAVVGIGLVYQGTAHRHTAEVLLAEIGRP PGPEMEYCTDRESYSLAAGLALGMVCLGHGSNLIGMSDLNVPEQLYQYMVGGHRRFQTGMHREK HKSPSYQIKEGDTINVDVTCPGATLALAMIYLKTNNRSIADWLRAPDTMYLLDFVKPEFLLLRT LARCLILWDDILPNSKWVDSNVPQIIRENSISLSEIELPCSEDLNLETLSQAHVYIIAGACLSL GFRFAGSENLSAFNCLHKFAKDFMNYLSAPNASVTGPYNLETCLSVVLLSLAMVMAGSGNLKVL QLCRFLHMKTGGEMNYGFHLAHHMALGLLFLGGGRYSLSTSNSSIAALLCALYPHFPAHSTDNR YHLQALRHLYVLAAEPRLLVPVDVDTNTPCYALIEVTYKGTQWYEQTKEELMAPTLLPELHLLK QMKVKGPRYWELLIDLSKGEQHLRSILSKDGVLYVKLRAGQLSYKEDPMGWQSLLAQTVANRNS EARAFKPETISSFTSDPALLSFAEYFCKPTVSMGQKQEILDLFSSILYECVAQETPEMLPAYIA MDQALRSLKKRDMSNTSDLWQIKLILEFFSSRSHQERQQTYPKRGLFINSEFLPVVKCTVDSTL DQWLQAGGDVCVHAYLSGQPVEKSQLNMLACFLVYHSVPAPRHLPPLGLEGSTSFAELLFRFRH LKMPVRALLRLAPVLLGNPQPMVM hide sequence

RefSeq Acc Id:	XP_008760399 ⟸ XM_008762177
- Peptide Label:	isoform X1
- UniProtKB:	A6HQ36 (UniProtKB/TrEMBL), A0A8I6A4J8 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSNFSEERATMIAAGDLQEFVPFGRDHCKHHPNALNLQLRQLQPASELWSSDGAAGLVGSLQEV TIHEKQKESWQLRKGVSEIGDAADYDEELYVAGNMVIWSKGSKSQALAVYKAFTVDSTVQQALW CDFIISQDKSEKIYKSHELEKCICILQSSCMNMHSIDGKDYIASLPFQVANVWATKYGLLFERS SSSHEVPPSLPREPLPTMFSMLHPLDEITPLVCKSGSLFGSSRVQYVVDPAVKIVFLNIDPSIV MTYDAVQNVHSVWTLRRVKPEEETAVLKFPEQAGTLQNAATSSSLTAHLRSLSKGESPVASPFQ NYSSIHSQSRSASSPSLHSRSPSISNMAALSRAHSPALGVHSFSGVQRFNLSSHNQSPKRHSIS HSPSGSFNDSFLAPETEPIVPELCIDHLWTETLPNMREKNSQASKVFITTDLCGQKFLCFLVEA QLQLRCVKFQESNDKTQLIFGSVTNIHAKDAAPVEKIDTMLVLEGNGNLVLYTGVVRVGKVFIP GLPAPSLTMSNMMPRPSTPLDGVSTPKPLSKLLGSMDEVVLLSPVPELRDSSKLNDSLYNEDCT FQQLGTYIHSVRDPVHNRVTLELSNGSMVRITIPEVATSELVQTCLQAIKFILPKEVAVQVLVK WYNVHSAPGGPSCHSEWSLFVICLLNMMGYNTDRLAWTRSFDFEGSLSPVIAPKKARPSDTGSD DDWEYLLNSEYHHNVESHLLNKSLCLNALEVTKTKDEDFPQNLSLDSSTLLFAHIPAIFFVLHL VYEELKLNTLMGEGICSLIDLLVQLARDLKLEPYLDHYYRDYPTLVKTTGQVCTIDQGQMGFMH HPSFFTSEPPSIYQWVSSCLKGEGTPPYPYLPGICERSRLVVLSIALYTLGDESCVSDETSQYL SKVTLTPQKPQAEQEENRFTFRQSASVSVLAERLVVWMASVGFTLRDLETLPFGIALPIRDAIY HCREQPDSDWSEAVCLLIGRQDLSKQACEGNLPRGKSVLSSDVASGAEAEEEDDGMNDLNHEVM SLIWSEDLRVQDVRRLLQSAQPVRVNVVQYPELSDHEFIEEKENRLLQLCQRTMALPVGRGMFT LFSYHPVPTEPLPIPKLNLTGRAPPRNTTVDLNSGNIDVPPNMASWASFHNGVAAGLKIAPASQ IDSAWIVYNKPKHAELANEYAGFLMALGLNGHLTKLATLNIHDYLTKGHEMTSIGLLLGVSAAK LGTMDMSITRLLSIHVPALLPPTSTELDVPHNVQVAAVVGIGLVYQGTAHRHTAEVLLAEIGRP PGPEMEYCTDRESYSLAAGLALGMVCLGHGSNLIGMSDLNVPEQLYQYMVGGHRRFQTGMHREK HKSPSYQIKEGDTINVDVTCPGATLALAMIYLKTNNRSIADWLRAPDTMYLLDFVKPEFLLLRT LARCLILWDDILPNSKWVDSNVPQIIRENSISLSEIELPCSEDLNLETLSQAHVYIIAGACLSL GFRFAGSENLSAFNCLHKFAKDFMNYLSAPNASVTGPYNLETCLSVVLLSLAMVMAGSGNLKVL QLCRFLHMKTGGEMNYGFHLAHHMALGLLFLGGGRYSLSTSNSSIAALLCALYPHFPAHSTDNR YHLQALRHLYVLAAEPRLLVPVDVDTNTPCYALIEVTYKGTQWYEQTKEELMAPTLLPELHLLK QMKVKGPRYWELLIDLSKGEQHLRSILSKDGVLYVKLRAGQLSYKEDPMGWQSLLAQTVANRNS EARAFKPETISSFTSDPALLSFAEYFCKPTVSMGQKQEILDLFSSILYECVAQETPEMLPAYIA MDQALRSLKKRDMSNTSDLWQIKLILEFFSSRSHQERQQTYPKRGLFINSEFLPVVKCTVDSTL DQWLQAGGDVCVHAYLSGQPVEKSQLNMLACFLVYHSVPAPRHLPPLGLEGSTSFAELLFRFRH LKMPVRALLRLAPVLLGNPQPMVM hide sequence

Ensembl Acc Id:

ENSRNOP00000052727 ⟸ ENSRNOT00000055875

Ensembl Acc Id:

ENSRNOP00000087529 ⟸ ENSRNOT00000099712

Ensembl Acc Id:

ENSRNOP00000085653 ⟸ ENSRNOT00000111998

RefSeq Acc Id:	XP_063139823 ⟸ XM_063283753
- Peptide Label:	isoform X2
- UniProtKB:	A0A8I6A3X6 (UniProtKB/TrEMBL), F1M801 (UniProtKB/TrEMBL)

Protein Domains

Anaphase-promoting complex subunit 1 beta-sandwich Anaphase-promoting complex subunit 1 C-terminal Anaphase-promoting complex subunit 1 middle Anaphase-promoting complex subunit 1 N-terminal

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-F1M801-F1-model_v2	AlphaFold	F1M801	1-1944	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13692413

Promoter ID:

EPDNEW_R2938

Type:

multiple initiation site

Name:

Anapc1_1

Description:

anaphase promoting complex subunit 1

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	3	121,226,132 - 121,226,192	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1306629	AgrOrtholog
BioCyc Gene	G2FUF-47940	BioCyc
Ensembl Genes	ENSRNOG00000016965	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000055875	ENTREZGENE
	ENSRNOT00000055875.5	UniProtKB/TrEMBL
	ENSRNOT00000099712.2	UniProtKB/TrEMBL
	ENSRNOT00000111998	ENTREZGENE
	ENSRNOT00000111998.2	UniProtKB/TrEMBL
Gene3D-CATH	1.25.10.10	UniProtKB/TrEMBL
InterPro	Apc1	UniProtKB/TrEMBL
	Apc1_3rd	UniProtKB/TrEMBL
	APC1_C	UniProtKB/TrEMBL
	Apc1_MidN	UniProtKB/TrEMBL
	Apc1_N	UniProtKB/TrEMBL
	ARM-like	UniProtKB/TrEMBL
	Proteasome/cyclosome_rpt	UniProtKB/TrEMBL
KEGG Report	rno:311412	UniProtKB/TrEMBL
NCBI Gene	311412	ENTREZGENE
PANTHER	ANAPHASE-PROMOTING COMPLEX SUBUNIT 1	UniProtKB/TrEMBL
	PTHR12827	UniProtKB/TrEMBL
Pfam	Apc1	UniProtKB/TrEMBL
	APC1_3rd	UniProtKB/TrEMBL
	APC1_C	UniProtKB/TrEMBL
	Apc1_MidN	UniProtKB/TrEMBL
	PC_rep	UniProtKB/TrEMBL
PhenoGen	Anapc1	PhenoGen
RatGTEx	ENSRNOG00000016965	RatGTEx
UniProt	A0A8I6A3X6	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6A4J8	ENTREZGENE, UniProtKB/TrEMBL
	A6HQ36	ENTREZGENE, UniProtKB/TrEMBL
	F1M801	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2008-04-30	Anapc1	anaphase promoting complex subunit 1	Anapc1_predicted	anaphase promoting complex subunit 1 (predicted)	'predicted' is removed	2292626	APPROVED
2005-01-12	Anapc1_predicted	anaphase promoting complex subunit 1 (predicted)			Symbol and Name status set to approved	70820	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - OMIM

Imported Annotations - KEGG (archival)

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - OMIM

Imported Annotations - KEGG (archival)