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Gene: Egflam (EGF-like, fibronectin type III and laminin G domains) Rattus norvegicus

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Symbol:

Egflam

Name:

EGF-like, fibronectin type III and laminin G domains

RGD ID:

1306592

Description:

Predicted to enable glycosaminoglycan binding activity. Predicted to act upstream of or within extracellular matrix organization and positive regulation of cell-substrate adhesion. Predicted to be located in basement membrane; cell surface; and interstitial matrix. Predicted to be active in photoreceptor ribbon synapse. Orthologous to human EGFLAM (EGF like, fibronectin type III and laminin G domains); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 3,3',4,4',5-pentachlorobiphenyl; amitrole.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

EGF-like, fibronectin type-III and laminin G-like domain-containing protein; LOC365691; pikachurin; RGD1306592; similar to Agrin

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	2	58,029,934 - 58,204,010 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	2	58,029,935 - 58,203,643 (-)	Ensembl				GRCr8
mRatBN7.2	2	56,301,945 - 56,476,665 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	2	56,302,566 - 56,476,298 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	2	63,406,366 - 63,580,040 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	2	61,476,948 - 61,650,970 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	2	56,478,490 - 56,652,163 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	2	56,503,002 - 56,681,334 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	2	56,502,807 - 56,679,955 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	2	76,243,791 - 76,418,618 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	2	56,493,064 - 56,666,659 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	2	51,921,938 - 52,095,667 (-)	NCBI		Celera
RGSC_v3.1	2	56,420,993 - 56,594,873 (-)	NCBI
Cytogenetic Map	2	q16	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

High Myopia (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dimethylhydrazine (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

3,3',4,4',5-pentachlorobiphenyl (EXP)

3,3',5,5'-tetrabromobisphenol A (ISO)

3-isobutyl-1-methyl-7H-xanthine (ISO)

4,4'-sulfonyldiphenol (ISO)

aflatoxin B1 (ISO)

all-trans-retinoic acid (ISO)

amitrole (EXP)

arsane (ISO)

arsenic atom (ISO)

arsenite(3-) (ISO)

atrazine (EXP)

benzo[a]pyrene (ISO)

bis(2-ethylhexyl) phthalate (EXP,ISO)

bisphenol A (EXP,ISO)

bisphenol F (ISO)

cadmium dichloride (EXP)

copper atom (EXP)

copper(0) (EXP)

cyclosporin A (ISO)

cytarabine (ISO)

DDT (EXP)

dexamethasone (ISO)

dibutyl phthalate (EXP)

dioxygen (ISO)

diquat (ISO)

dorsomorphin (ISO)

doxorubicin (ISO)

entinostat (ISO)

ethylparaben (ISO)

indole-3-methanol (EXP)

indometacin (ISO)

lead(0) (ISO)

methamphetamine (EXP)

mono(2-ethylhexyl) phthalate (ISO)

N-nitrosodiethylamine (EXP)

okadaic acid (ISO)

ozone (ISO)

paracetamol (ISO)

paraquat (EXP)

pioglitazone (ISO)

rotenone (ISO)

SB 431542 (ISO)

SCH 23390 (EXP)

silicon dioxide (EXP)

sodium arsenite (ISO)

Soman (EXP)

tebuconazole (ISO)

testosterone (ISO)

thiram (ISO)

toluene (EXP)

triadimefon (EXP)

trichloroethene (EXP)

trichostatin A (ISO)

trimellitic anhydride (ISO)

valproic acid (ISO)

vorinostat (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

extracellular matrix organization (ISO)

nervous system development (IBA)

positive regulation of cell-substrate adhesion (ISO)

signal transduction (IBA)

synapse assembly (IEA,ISO)

Cellular Component

basement membrane (IBA,IEA,ISO)

cell junction (IEA)

cell projection (IEA)

cell surface (ISO)

extracellular matrix (IEA,ISO)

interstitial matrix (IEA,ISO)

photoreceptor ribbon synapse (IEA,ISO)

plasma membrane (IBA)

presynaptic active zone (IEA)

synapse (IBA)

synaptic cleft (IEA,ISO)

trans-synaptic protein complex (IEA,ISO)

Molecular Function

calcium ion binding (IEA)

glycosaminoglycan binding (IEA,ISO)

molecular adaptor activity (IEA,ISO)

protein binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
3.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:12477932	PMID:18757743	PMID:23226524

Genomics

Comparative Map Data

Egflam
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	2	58,029,934 - 58,204,010 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	2	58,029,935 - 58,203,643 (-)	Ensembl				GRCr8
mRatBN7.2	2	56,301,945 - 56,476,665 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	2	56,302,566 - 56,476,298 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	2	63,406,366 - 63,580,040 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	2	61,476,948 - 61,650,970 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	2	56,478,490 - 56,652,163 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	2	56,503,002 - 56,681,334 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	2	56,502,807 - 56,679,955 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	2	76,243,791 - 76,418,618 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	2	56,493,064 - 56,666,659 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	2	51,921,938 - 52,095,667 (-)	NCBI		Celera
RGSC_v3.1	2	56,420,993 - 56,594,873 (-)	NCBI
Cytogenetic Map	2	q16	NCBI

EGFLAM
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	5	38,258,559 - 38,465,480 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	5	38,258,409 - 38,465,480 (+)	Ensembl			hg38	GRCh38
GRCh37	5	38,258,661 - 38,465,582 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	5	38,294,290 - 38,501,338 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Celera	5	38,144,780 - 38,352,160 (+)	NCBI		Celera
Cytogenetic Map	5	p13.2-p13.1	NCBI
HuRef	5	38,210,992 - 38,417,598 (+)	NCBI		HuRef
CHM1_1	5	38,260,483 - 38,467,502 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	5	38,507,663 - 38,714,549 (+)	NCBI		T2T-CHM13v2.0

Egflam
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	15	7,235,598 - 7,428,203 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	15	7,235,601 - 7,427,876 (-)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	15	7,206,120 - 7,398,744 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	15	7,206,120 - 7,398,395 (-)	Ensembl			mm10	GRCm38
MGSCv37	15	7,156,120 - 7,348,304 (-)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	15	7,153,335 - 7,345,519 (-)	NCBI		MGSCv36	mm8
Celera	15	7,054,466 - 7,246,274 (-)	NCBI		Celera
Cytogenetic Map	15	A1	NCBI
cM Map	15	3.5	NCBI

Egflam
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955426	22,856,186 - 23,031,029 (+)	Ensembl
ChiLan1.0	NW_004955426	22,856,515 - 23,030,517 (+)	NCBI	ChiLan1.0	ChiLan1.0

EGFLAM
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	4	71,872,765 - 72,084,164 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	5	70,027,330 - 70,237,797 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	5	71,909,106 - 72,119,958 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	5	76,944,890 - 77,155,714 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	5	76,944,818 - 77,073,380 (-)	Ensembl			panPan2	panpan1.1

EGFLAM
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	4	70,391,657 - 70,574,629 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	4	70,392,330 - 70,575,225 (-)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	4	70,067,121 - 70,249,572 (-)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	4	70,908,254 - 71,090,611 (-)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	4	70,908,281 - 71,090,300 (-)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	4	70,656,297 - 70,837,561 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	4	70,769,824 - 70,951,780 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	4	71,308,421 - 71,490,218 (-)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Egflam
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024407213	227,489,464 - 227,665,015 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936518	3,706,803 - 3,881,592 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936518	3,706,818 - 3,882,308 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

EGFLAM
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	16	23,509,491 - 23,606,924 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	16	23,402,937 - 23,606,234 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	16	24,682,042 - 24,903,094 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

EGFLAM
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	4	37,096,097 - 37,297,978 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	4	37,098,302 - 37,297,968 (+)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666071	27,460,741 - 27,660,250 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Egflam
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624759	16,488,798 - 16,658,428 (-)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624759	16,488,906 - 16,658,332 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Egflam
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	3	173,095,507 - 173,268,514 (+)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Egflam
1008 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	88
Count of miRNA genes:	71
Interacting mature miRNAs:	83
Transcripts:	ENSRNOT00000016722
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
10755430	Coatc6	Coat color QTL 6		0.02576	coat/hair pigmentation trait (VT:0010463)	pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)	2	13325041	58325041	Rat
7387318	Stl32	Serum triglyceride level QTL 32	3.2	0.0003	blood triglyceride amount (VT:0002644)	plasma triglyceride level (CMO:0000548)	2	24117813	69117813	Rat
10755436	Coatc8	Coat color QTL 8		0.02431	coat/hair pigmentation trait (VT:0010463)	pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)	2	36750344	81750344	Rat
1298074	Bp164	Blood pressure QTL 164		0.003	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	44537979	205135428	Rat
10755499	Bp389	Blood pressure QTL 389	2.61		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	2	20695736	231474293	Rat
1358917	Cm42	Cardiac mass QTL 42	2.82		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	2	27148328	206613235	Rat
1579916	Bp270	Blood pressure QTL 270		0.003	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	2	16051883	61051883	Rat
731167	Glom4	Glomerulus QTL 4	2.4	0.0082	kidney glomerulus morphology trait (VT:0005325)	count of superficial glomeruli not directly contacting the kidney surface (CMO:0001002)	2	22038044	67038044	Rat
1358913	Cm41	Cardiac mass QTL 41	2.73		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	2	27148328	206613235	Rat
152025242	Bw191	Body weight QTL 191	3.62		body mass (VT:0001259)		2	40306867	124537199	Rat
1302794	Stl27	Serum triglyceride level QTL 27	4.4	0.0001	blood triglyceride amount (VT:0002644)	plasma triglyceride level (CMO:0000548)	2	27148328	145807373	Rat
9590095	Sffal3	Serum free fatty acids level QTL 3	6.78	0.001	blood free fatty acid amount (VT:0001553)	plasma free fatty acids level (CMO:0000546)	2	28889991	73889991	Rat
70174	BpQTLCluster2	Blood pressure QTL cluster 2	4.24		arterial blood pressure trait (VT:2000000)	absolute change in mean arterial blood pressure (CMO:0000533)	2	41801363	104744824	Rat
1331764	Bp205	Blood pressure QTL 205	3.476		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	2	14368707	59368707	Rat
631208	Bw1	Body weight QTL1	5.09		mesenteric fat pad mass (VT:0010427)	mesenteric fat pad weight to body weight ratio (CMO:0000654)	2	44904355	85286097	Rat
1358901	Cm38	Cardiac mass QTL 38	2		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	2	27148328	159440891	Rat
1331760	Bp206	Blood pressure QTL 206	3.62454		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	2	4265106	205135428	Rat
1358899	Kidm23	Kidney mass QTL 23	3.88		kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	2	27148328	159440891	Rat
2293835	Kiddil5	Kidney dilation QTL 5	3.8		kidney pelvis morphology trait (VT:0004194)	hydronephrosis severity score (CMO:0001208)	2	44537979	159440891	Rat
1300155	Bp174	Blood pressure QTL 174	4.09		arterial blood pressure trait (VT:2000000)	absolute change in mean arterial blood pressure (CMO:0000533)	2	44537979	112567334	Rat
1358908	Bw49	Body weight QTL 49	3.36		body mass (VT:0001259)	body weight (CMO:0000012)	2	27148557	159440760	Rat
1358910	Kidm27	Kidney mass QTL 27	5.77		kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	2	27148328	159440891	Rat
631266	Bp132	Blood pressure QTL 132		0.0005	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	47856345	205135428	Rat
1358911	Kidm28	Kidney mass QTL 28	5.42		kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	2	27148328	159440891	Rat
61355	Bp36	Blood pressure QTL 36	2.9		blood pressure trait (VT:0000183)	systolic blood pressure (CMO:0000004)	2	7605533	104774005	Rat
1358904	Cm39	Cardiac mass QTL 39	2.26		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	2	27148328	159440891	Rat
1354617	Bp240	Blood pressure QTL 240	4		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	2	28652666	83465677	Rat
1359034	Bp274	Blood pressure QTL 274			arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	2	51266859	96266859	Rat
2293843	Kiddil6	Kidney dilation QTL 6	3.1		kidney pelvis morphology trait (VT:0004194)	hydronephrosis severity score (CMO:0001208)	2	44537979	184731399	Rat
1358887	Bw50	Body weight QTL 50	2.39		body mass (VT:0001259)	body weight (CMO:0000012)	2	27148557	159440760	Rat
2306903	Bp336	Blood pressure QTL 336		0.01	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	38426449	111295694	Rat
1298085	Bp165	Blood pressure QTL 165		0.0006	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	44537979	205135428	Rat
2290453	Scl55	Serum cholesterol level QTL 55	2.83		blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	2	28652666	139067443	Rat
152025206	Hrtrt23	Heart rate QTL 23	5.98		heart pumping trait (VT:2000009)		2	30219200	171802126	Rat
1358894	Kidm24	Kidney mass QTL 24	4.03		kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	2	27148328	159440891	Rat
731184	Mamtr4	Mammary tumor resistance QTL 4		0.0003	mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	2	18227137	63227137	Rat
61371	Edpm1	Estrogen-dependent pituitary mass QTL 1	4	0.05	pituitary gland mass (VT:0010496)	pituitary gland wet weight (CMO:0000853)	2	36868643	81868643	Rat
152025204	Hrtrt22	Heart rate QTL 22	5.6		heart pumping trait (VT:2000009)		2	30219200	171802126	Rat
1354601	Slep1	Serum leptin concentration QTL 1	5.39		blood leptin amount (VT:0005667)	serum leptin level (CMO:0000780)	2	44904355	89904355	Rat
1582246	Cm60	Cardiac mass QTL 60	5.8		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	2	33269996	78269996	Rat
1354603	Bp243	Blood pressure QTL 243	3.9		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	2	28652666	73652666	Rat

Markers in Region

D2Rat319

Rat Assembly	Chr	Position (strand)	Source	JBrowse
GRCr8	2	58,196,547 - 58,196,797 (+)	Marker Load Pipeline
mRatBN7.2	2	56,469,199 - 56,469,449 (+)	MAPPER	mRatBN7.2
Rnor_6.0	2	56,672,848 - 56,673,097	NCBI	Rnor6.0
Rnor_5.0	2	76,410,914 - 76,411,163	UniSTS	Rnor5.0
RGSC_v3.4	2	56,659,564 - 56,659,814	RGD	RGSC3.4
RGSC_v3.4	2	56,659,565 - 56,659,814	UniSTS	RGSC3.4
Celera	2	52,088,573 - 52,088,822	UniSTS
RGSC_v3.1	2	56,587,752 - 56,588,257	RGD
SHRSP x BN Map	2	25.1898	UniSTS
SHRSP x BN Map	2	25.1898	RGD
Cytogenetic Map	2	q16	UniSTS

D2Chm191

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	2	56,309,068 - 56,309,311 (+)	MAPPER	mRatBN7.2
Rnor_6.0	2	56,510,010 - 56,510,252	NCBI	Rnor6.0
Rnor_5.0	2	76,250,295 - 76,250,537	UniSTS	Rnor5.0
RGSC_v3.4	2	56,499,568 - 56,499,810	UniSTS	RGSC3.4
Celera	2	51,928,442 - 51,928,684	UniSTS
Cytogenetic Map	2	q16	UniSTS

D2Got377

Rat Assembly	Chr	Position (strand)	Source	JBrowse
GRCr8	2	58,124,855 - 58,124,940 (+)	Marker Load Pipeline
Rnor_6.0	2	56,601,153 - 56,601,235	NCBI	Rnor6.0
Rnor_5.0	2	76,339,469 - 76,339,551	UniSTS	Rnor5.0
RGSC_v3.4	2	56,587,924 - 56,588,006	UniSTS	RGSC3.4
Celera	2	52,016,905 - 52,016,987	UniSTS
Cytogenetic Map	2	q16	UniSTS

RH132212

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	2	56,302,751 - 56,302,954 (+)	MAPPER	mRatBN7.2
Rnor_6.0	2	56,503,693 - 56,503,895	NCBI	Rnor6.0
Rnor_5.0	2	76,243,978 - 76,244,180	UniSTS	Rnor5.0
RGSC_v3.4	2	56,493,251 - 56,493,453	UniSTS	RGSC3.4
Celera	2	51,922,125 - 51,922,327	UniSTS
Cytogenetic Map	2	q16	UniSTS

RH140229

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	2	56,349,314 - 56,349,494 (+)	MAPPER	mRatBN7.2
Rnor_6.0	2	56,550,915 - 56,551,094	NCBI	Rnor6.0
Rnor_5.0	2	76,291,200 - 76,291,379	UniSTS	Rnor5.0
RGSC_v3.4	2	56,539,807 - 56,539,986	UniSTS	RGSC3.4
Celera	2	51,968,859 - 51,969,038	UniSTS
Cytogenetic Map	2	q16	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	162	91	90	59	30	59	6	288	130	11	141	75	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001108938	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006232013	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008760781	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017590986	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017590987	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	BC168173	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH474048	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000002	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000016722 ⟹ ENSRNOP00000016722

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	2	58,029,935 - 58,203,643 (-)	Ensembl
mRatBN7.2 Ensembl	2	56,302,566 - 56,476,298 (-)	Ensembl
Rnor_6.0 Ensembl	2	56,502,807 - 56,679,955 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000104810 ⟹ ENSRNOP00000091969

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	2	58,029,935 - 58,203,643 (-)	Ensembl
mRatBN7.2 Ensembl	2	56,302,566 - 56,476,298 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000138659 ⟹ ENSRNOP00000102334

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	2	58,029,935 - 58,157,020 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000168288 ⟹ ENSRNOP00000112648

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	2	58,041,063 - 58,203,643 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000172119 ⟹ ENSRNOP00000109141

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	2	58,029,935 - 58,203,643 (-)	Ensembl

RefSeq Acc Id:

NM_001108938 ⟹ NP_001102408

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	58,029,934 - 58,203,643 (-)	NCBI
mRatBN7.2	2	56,302,565 - 56,476,298 (-)	NCBI
Rnor_6.0	2	56,503,506 - 56,679,942 (-)	NCBI
Rnor_5.0	2	76,243,791 - 76,418,618 (-)	NCBI
RGSC_v3.4	2	56,493,064 - 56,666,659 (-)	RGD
Celera	2	51,921,938 - 52,095,667 (-)	RGD

Sequence:

show sequence

CGCTGAGAGCCCGCTCCACTCCAAGCACGCCAGCCTCCCAGCTGCTGTCTTGCCTCCTCGGACT
CCCGAGTGGCTCCTGGTTCAGTTCCCTGGGTCCCCCACCTTCTCATCCTCGCGTCACTGGCGTC
CCCCGCGTCCCCAGGAGACGCCCTTTCCCCGCGCGCCCGGGACTTGGTGAAACTTTGCAGACAC
GGTCGGTGAGATGGATTTAATCTCAACCTTCTTGCTCCATTTCTTGCTCCTGGCCTGCAGCCTC
CCACCCGGCGCCGTGTCACTCCGAACCGCTCTGCGAAAATCAGGCAAGGTGGGACCTCCTCTTG
ACATCAAACTGGGAGCCTTGAACTGTACAGCCTTCAGCATCCAGTGGAAAACACCAAAGCGTTC
TGGTAGCTCCATTGTTGGGTACACAGTATTTTACTCTGAGCTTGGTTCAGATAAGTCCCTCCGG
GAACAGTCACATAATGTACCTGTTGGCCAGGATACCCTAATCACTGAGGAAGTGATTGGAGATT
TGAAGCCAGGCACTGAATATCGAGTGAGCATAGCAGCCTACAGCCAGACTGGCAAAGGGAGGCT
TAGCTTCCCTCGGCATGTGACCACTTTGTCTCAAGATTCCTGCCTGCCCCCTGAAGCACCCCAT
CAGCCACATGTCCTTGTGGTTTCTGATTCTGAAGTGGCCCTATCTTGGAGACCGGGAGAGAATG
AAGGAAGTGCCCCAATTCAGTCCTACTCTGTGGAATTCATTAGGCCAGATTTTGACAAGAGCTG
GACCATAATCCAAGAGCGCCTGCAGATGGACTCCATGGTTATCAAAGGCCTTGATCCAGACACC
AACTACCAGTTTGCTGTGAGAGCCATGAATGCCTATGGCTTCAGTCTGCGCAGCCAGCCCAGCA
ACACCATCCGAACTCTGGGTCCTGGGGAGGCTGGAAGTGGCCGCTATGGACCTGGGTATATCAC
CGATACCGGCGTGAGTGAGGATGACGATGCATCAGAAGACGAGCTAGATCTGGATGTCTCCTTT
GAGGAGGTTAAACCACTTCCTGCTACCAAAGTTGGGAATAAGAAGTCCAAGAAGACTTCTGTCT
CCAACTCAGAGATGGACTCCAGACTTGCCCAACCTACCTCAGCATCTCTCCCTGAAACTACAGT
GGCTGTGCCACCCACGCCAGCCCAACGGAAGGGGAAGAACAGTGTGGCCGTGATGTCAAGGCTC
TTTGACATGTCCTGTGACGAAACCCTCTGTTCAGCTGACAGCTTCTGTGTCAATGACTACGCCT
GGGGAGGCTCACGATGCCATTGCAACCTGGGCAAAGGAGGCGAGGCCTGCTCAGAAGATATCTT
TATTCAGTATCCACAGTTCTTTGGCCACTCCTATGTAACCTTTGAGCCTCTGAAGAACTCTTAT
CAGGCATTTCAGATTACTCTGGAATTCAGGGCAGAGGCAGAAGATGGCTTACTGCTCTACTGTG
GGGAGAGTGAACATGGGAGAGGAGACTTCATGTCCCTGGCTCTCATCCGACGCTCCCTCCACTT
CAGGTTTAATTGTGGAACTGGGATGGCCATCATCATAAGTGAGACCAAAATCAAGCTTGGGGCC
TGGCACTCGGTGACACTGTATAGAGATGGGCTGAACGGGCTGCTGCAGTTGAACAATGGCACCC
CAGTAACAGGCCAGTCCCAGGGTCAGTACAGTAAAATTACCTTCCGGACACCTCTGTACCTTGG
TGGTGCTCCCAGTGCTTACTGGCTGGTCAGAGCGACGGGGACAAATCGTGGCTTCCAAGGCTGT
GTGCAGTCACTTGCTGTTAACGGGAAGAAGATTGACATGAGGCCCTGGCCACTGGGGAAAGCCC
TCAACGGAGCTGATGTTGGGGAGTGCAGCAGTGGGATCTGTGATGAAGCCTCCTGCATCAACGG
GGGCACCTGCGCAGCCATCAAGGCCGACTCCTACATCTGCCTCTGTCCCCTTGGGTTCAGAGGT
CGACACTGTGAAGATGCATTTACCCTGACCATTCCTCAGTTCAGAGAGTCGCTGAGGTCCTACG
CTGCCACGCCCTGGCCCCTGGAGCCTCAGCACTATCTTTCTTTCACCGAGTTTGAGATCACATT
TCGGCCAGACTCCGGGGATGGGGTCCTTTTGTACAGCTACGACACAAGCAGCAAGGACTTCCTG
TCCATTATTATGGCTGCAGGCCATGTGGAATTCCGCTTCGACTGTGGTTCTGGGACCGGAGTTC
TCAGGAGTGAGGATACCCTCACCCTAGGCCAATGGCATGACCTACGCGTGTCTCGCACAGCGAA
GAATGGGATCTTACAGGTGGACAAGCAGAAGGTAGTAGAAGGAATGGCAGAGGGAGGCTTCACC
CAGATTAAGTGTAATACAGACATTTTTATTGGCGGAGTCCCAAATTACGATGATGTCAAGAAGA
ACTCGGGTATCCTCCATCCATTTAGTGGGAGCATCCAGAAGATCATCCTAAATGACCGGACCAT
CCATGTGAGGCACGACTTTACATCTGGTGTGAATGTGGAGAACGCAGCGCACCCCTGTGTGGGG
GCCCCCTGTGCCCATGGGGGCAGCTGTAGGCCCAGGAAGGAGGGTTATGAGTGTGACTGTCCCT
TGGGCTTCGAAGGCCTGAACTGCCAGAAAGCGATTACAGAAGCCATTGAGATCCCACAGTTCAT
CGGTCGGAGTTACCTGACCTATGACAACCCAAATATCCTCAAGAGGGTGTCCGGATCAAGGTCA
AATGCTTTCATGAGGTTTAAGACAACCGCCAAGGACGGCCTGTTGCTGTGGAGGGGGGACAGCC
CCATGAGACCTAACAGCGACTTCATTTCCCTGGGTCTTCGGGATGGAGCCCTGGTGTTCAGCTA
CAACCTGGGCAGTGGTGTGGCTTCCATTATGGTGAATGGTTCCTTCAGCGATGGCCGGTGGCAC
CGAGTCAAGGCTGTCAGGGATGGCCAGTCTGGGAAAATTACGGTGGATGACTATGGAGCCAGAA
CAGGCAAGTCACCTGGCATGATGAGGCAACTTAACATCAATGGGGCTCTGTATGTGGGTGGAAT
GAAGGAAATTGCTCTGCGCACGAACAGACAGTACATGCGAGGCCTTGTGGGCTGCATCTCCCAT
TTCACATTGTCCACCGATTACCACATTTCCCTTGTGGAAGACGCTGTGGATGGGAAGAACATCA
ACACTTGTGGGGCTAAGTAACACCAGCTGGCCTTGCCCAAGGGACATTGACAGCCTCTATCCTG
AAATCCCAGGGGCCCAGAGACCCTGCCTGATGCTGCACTCAGAGGTCTTGAAATCAGGTGTGTT
TACTTTCATCGAGGACAAAGTGCGCCCTGGTGAGAGCCAAGACTGAAGGCCCTGAGTGGCCTTC
TCTGCTAAAGCCCTGTGGACCAAACCCAATGGACTACTGTGGATAGGAAGCATTGGACTTTGTC
ACTCGACGTATAGAGTCTGTGAGAGATGGTATCAGTGCACGCTCTGGAAAAACTCTGCTGTAGC
TCAATGGCTGTGCTGTATTAGAGAGAGCCAGACTGGGTGAGAAAGAGTGAATGAGTGAATGAGA
GAGAGAGAGAGAGAGAGAGAGAGAGAGAGCACAGAGATAAGCAGAGAGAGACAGACACCCCTCT
GAATAATATTAAAATATTTTTGCTCTTCCTTGACTTAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AA

hide sequence

RefSeq Acc Id:

XM_006232013 ⟹ XP_006232075

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	58,029,934 - 58,204,010 (-)	NCBI
mRatBN7.2	2	56,301,945 - 56,476,665 (-)	NCBI
Rnor_6.0	2	56,503,002 - 56,681,334 (-)	NCBI
Rnor_5.0	2	76,243,791 - 76,418,618 (-)	NCBI

Sequence:

show sequence

GACATTAGCGGCCTCGGGGACCCTAAGGGTCTAGCAGAACTTATCTCTGCAGAGTCACCTTGCC
TGGTTTCCCTACGTAAGTGTAGTGCAGTCTGGACATTCCTGAACTAGTTCCGTTTAAGAGAAAC
TAGGGTTCTGGGCTTAGGCATCTTTAGATACTCAAGTTGGGGCAGACTTTGAATTTATTTATGG
AACAATTACACACCTGAAAATACCAACGTGTAAGGAAATATATTCTAACCTTGCTAACAGGATT
AGGTTCATTACGGGACCAAGGGTAGAAATCACGGGACAACACTCAACTCTCCTAATGGAAGGTT
AACAAGAAGGGGCCAGGACACAGCTCTGCCAGGTAGGGCTTGGAGATCACCCGCAGACCTCTGC
CAGTGACCTGCAGTCTCTAACTGCGGGGCGCTTCCTAGGGCCTTTGATCCTTCCCCGGATTCTG
GCAAGGGTCCATTTTCCTTTTAGTTTATTTGTTGTATCTGTTTCAAGAGGGCTTGGGGGGGGGG
GGTCAGAACGCCAGTTTGCGCCGGAGCTCACACCCTTTGGGGGCAGTACTGTAAACTCCAGTCA
GCTACACAGATCGCTTAGGAAGGGAGGGGGTCTTTCCTCAGCTGGGAAGCTAAATGCTGGCTCC
CGGCTTTGCTCCTATTCCCCAGTCCCAGCCTGGCCGCAAGCGTCCCCTTTACAGAGGACCTTCT
CAGCCCCAAAGAAGCTGGAGTTGCCAGAATTACCTGGACTTTGTTCTCCTTTCTCTGGAGGCTC
TAAAGTTGCCACCCGCCACCAAGAGGGACCTGCTCCCCCAGCACCAGTCCCTAATCTTCATTTG
GCCTTTGCCTCGGCGTGGCCTAGCCTTAGCTCTCCCTCCATCTGTGCGCCTTAAATCTCACTTA
TCTTCTTAGCACCCAAGCCTTGGCCAGCCCCGCCCTCCTCCTCCGGACTTGCACATTCCAGCCC
CTCCCTTGCGCTTCCTCCGGAGTACCTTACTGGTAGTAACCTTTGAGGCGTTAGGAAAAAGTGG
CTTAAACTGGGTGCAAGCCACCTAGTGGGGGAAGAAGAGTCCAGCCAACAATACCGAGGCACCC
CAAAAGTTCAGGGTTAGGATCCAGTGGAGGACCCTGGGCCCACAGTCTAAGTCAAGGAACTCCG
GCGGAGTGTTGAAGTCGGTCCCACCCCGGCCCCCAATCTAGGTCACCCGCGGGGAAGGGCTGAG
CTGGGGGCTGTCTGCGCGGGAGGTGGGCGCGGAGTGAATTGATTCAGACCCTGCCCCTCGCTCT
TCCACTAGATTGTAATTCCATCTCCTGCGGGTCGAGCCGCCCTCCCTCAGGCGGCCAGTGCGTC
CCTCCCCTCGGCTTCCAGCGTCCACTCCCCAGCCCCGAAAAGCCTTGCCGCTGAGAGCCCGCTC
CACTCCAAGCACGCCAGCCTCCCAGCTGCTGCCTTGCCTCCTCGGACTCCCGAGTGGCTCCTGG
TTCAGTTCCCTGGGTCCCCCACCTTCTCATCCTCGCGTCACTGGCGTCCCCCGCGTCCCCAGGA
GACGCCCTTTCCCCGCGCGCCCGGGACTTGGTGAAACTTTGCAGACACGGTCGGTGAGATGGAT
TTAATCTCAACCTTCTTGCTCCATTTCTTGCTCCTGGCCTGCAGCCTCCCACCCGGCGCCGTGT
CACTCCGAACCGCTCTGCGAAAATCAGGCAAGGTGGGACCTCCTCTTGACATCAAACTGGGAGC
CTTGAACTGTACAGCCTTCAGCATCCAGTGGAAAACACCAAAGCGTTCTGGTAGCTCCATTGTT
GGGTACACAGTATTTTACTCTGAGCTTGGTTCAGATAAGTCCCTCCGGGAACAGTCACATAATG
TACCTGTTGGCCAGGATACCCTAATCACTGAGGAAGTGATTGGAGATTTGAAGCCAGGCACTGA
ATATCGAGTGAGCATAGCAGCCTACAGCCAGACTGGCAAAGGGAGGCTTAGCTTCCCTCGGCAT
GTGACCACTTTGTCTCAAGATTCCTGCCTGCCCCCTGAAGCACCCCATCAGCCACATGTCCTTG
TGGTTTCTGATTCTGAAGTGGCCCTATCTTGGAGACCGGGAGAGAATGAAGGAAGTGCCCCAAT
TCAGTCCTACTCTGTGGAATTCATTAGGCCAGATTTTGACAAGAGCTGGACCATAATCCAAGAG
CGCCTGCAGATGGACTCCATGGTTATCAAAGGCCTTGATCCAGACACCAACTACCAGTTTGCTG
TGAGAGCCATGAATGCCTATGGCTTCAGTCTGCGCAGCCAGCCCAGCAACACCATCCGAACTCT
GGGTCCTGGGGAGGCTGGAAGTGGCCGCTATGGACCTGGGTATATCACCGATACCGGCGTGAGT
GAGGATGACGATGCATCAGAAGACGAGCTAGATCTGGATGTCTCCTTTGAGGAGGTTAAACCAC
TTCCTGCTACCAAAGTTGGGAATAAGAAGTCCAAGAAGACTTCTGTCTCCAACTCAGAGATGGA
CTCCAGACTTGCCCAACCTACCTCAGCATCTCTCCCTGAAACTACAGTGGCTGTGCCACCCACG
CCAGCCCAACGGAAGGGGAAGAACAGTGTGGCCGTGATGTCAAGGCTCTTTGACATGTCCTGTG
ACGAAACCCTCTGTTCAGCTGACAGCTTCTGTGTCAATGACTACGCCTGGGGAGGCTCACGATG
CCATTGCAACCTGGGCAAAGGAGGCGAGGCCTGCTCAGAAGATATCTTTATTCAGTATCCACAG
TTCTTTGGCCACTCCTATGTAACCTTTGAGCCTCTGAAGAACTCTTATCAGGCATTTCAGATTA
CTCTGGAATTCAGGGCAGAGGCAGAAGATGGCTTACTGCTCTACTGTGGGGAGAGTGAACATGG
GAGAGGAGACTTCATGTCCCTGGCTCTCATCCGACGCTCCCTCCACTTCAGGTTTAATTGTGGA
ACTGGGATGGCCATCATCATAAGTGAGACCAAAATCAAGCTTGGGGCCTGGCACTCGGTGACAC
TGTATAGAGATGGGCTGAACGGGCTGCTGCAGTTGAACAATGGCACCCCAGTAACAGGCCAGTC
CCAGGGTCAGTACAGTAAAATTACCTTCCGGACACCTCTGTACCTTGGTGGTGCTCCCAGTGCT
TACTGGCTGGTCAGAGCGACGGGGACAAATCGTGGCTTCCAAGGCTGTGTGCAGTCACTTGCTG
TTAACGGGAAGAAGATTGACATGAGGCCCTGGCCACTGGGGAAAGCCCTCAACGGAGCTGATGT
TGGGGAGTGCAGCAGTGGGATCTGTGATGAAGCCTCCTGCATCAACGGGGGCACCTGCGCAGCC
ATCAAGGCCGACTCCTACATCTGCCTCTGTCCCCTTGGGTTCAGAGGTCGACACTGTGAAGATG
CATTTACCCTGACCATTCCTCAGTTCAGAGAGTCGCTGAGGTCCTACGCTGCCACGCCCTGGCC
CCTGGAGCCTCAGCACTATCTTTCTTTCACCGAGTTTGAGATCACATTTCGGCCAGACTCCGGG
GATGGGGTCCTTTTGTACAGCTACGACACAAGCAGCAAGGACTTCCTGTCCATTATTATGGCTG
CAGGCCATGTGGAATTCCGCTTCGACTGTGGTTCTGGGACCGGAGTTCTCAGGAGTGAGGATAC
CCTCACCCTAGGCCAATGGCATGACCTACGCGTGTCTCGCACAGCGAAGAATGGGATCTTACAG
GTGGACAAGCAGAAGGTAGTAGAAGGAATGGCAGAGGGAGGCTTCACCCAGATTAAGTGTAATA
CAGACATTTTTATTGGCGGAGTCCCAAATTACGATGATGTCAAGAAGAACTCGGGTATCCTCCA
TCCATTTAGTGGGAGCATCCAGAAGATCATCCTAAATGACCGGACCATCCATGTGAGGCACGAC
TTTACATCTGGTGTGAATGTGGAGAACGCAGCGCACCCCTGTGTGGGGGCCCCCTGTGCCCATG
GGGGCAGCTGTAGGCCCAGGAAGGAGGGTTATGAGTGTGACTGTCCCTTGGGCTTCGAAGGCCT
GAACTGCCAGAAAGAGTGTGGAAACTACTGCCTCAATACGATTACAGAAGCCATTGAGATCCCA
CAGTTCATCGGTCGGAGTTACCTGACCTATGACAACCCAAATATCCTCAAGAGGGTGTCCGGAT
CAAGGTCAAATGCTTTCATGAGGTTTAAGACAACCGCCAAGGACGGCCTGTTGCTGTGGAGGGG
GGACAGCCCCATGAGACCTAACAGCGACTTCATTTCCCTGGGTCTTCGGGATGGAGCCCTGGTG
TTCAGCTACAACCTGGGCAGTGGTGTGGCTTCCATTATGGTGAATGGTTCCTTCAGCGATGGCC
GGTGGCACCGAGTCAAGGCTGTCAGGGATGGCCAGTCTGGGAAAATTACGGTGGATGACTATGG
AGCCAGAACAGGCAAGTCACCTGGCATGATGAGGCAACTTAACATCAATGGGGCTCTGTATGTG
GGTGGAATGAAGGAAATTGCTCTGCACACGAACAGACAGTACATGCGAGGCCTTGTGGGCTGCA
TCTCCCATTTCACATTGTCCACCGATTACCACATTTCCCTTGTGGAAGACGCTGTGGATGGGAA
GAACATCAACACTTGTGGGGCTAAGTAACACCAGCTGGCCTTGCCCAAGGGACATTGACAGCCT
CTATCCTGAAATCCCAGGGGCCCAGAGACCCTGCCTGATGCTGCACTCAGAGGTCTTGAAATCA
GGTGTGTTTACTTTCATCGAGGACAAAGTGCGCCCTGGTGAGAGCCAAGACTGAAGGCCCTGAG
TGGCCTTCTCTGCTAAAGCCCTGTGGACCAAACCCAATGGACTACTGTGGATAGGAAGCATTGG
ACTTTGTCACTCGACGTATAGAGTCTGTGAGAGATGGTATCAGTGCACGCTCTGGAAAAACTCT
GCTGTAGCTCAATGGCTGTGCTGTATTAGAGAGAGCCAGACTGGGTGAGAAAGAGTGAATGAGT
GAATGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGCACAGAGATAAGCAGAGAGAGACAGAC
ACCCCTCTGAATAATATTAAAATATTTTTGCTCTTCCTTGACTTATGACGCTAGCAGAATGACT
GTGTGACCCTGAATTTCATACTTCCAATCTTGGTCTATGGATTGTGTAGATTAACCCCTTCCAT
GCCTCGCTGGCTGACTCAATGTGCTCTGTCTAGTCCGTGAAAATAAAAGTCAGGGGGCAAATTA
AACATATAATAATAATCAGACTGTGACCTCCTTCCCCCAAGCTTACCTCTAAGGCAAATATTCT
TTTTTTATGATGCAGAGTGAAGAAGGTGGGTCCCCTGATTTTGTAGCTGTACATTTTGTATGTG
TCTCTTTTTATAGCTGCAGACTGTACACCTCATGGTGTGCTTTGGAAAGTTAGTGGCTGATCTG
CCTCATGGCAAACCTTCCTAATAGTTTTCCCACAAAGGACACATGGTCGAGCCGCTTGTAGTGT
CGGTGGAGTGGTAGAGAGTGACTAGGGTGGGCTACTGGCAGAAGGGACCATTCTCTTTCAGTCT
ATGCTGATGGTTCAATATATGCTGATGCGTCCTACGA

hide sequence

RefSeq Acc Id:

XM_017590987 ⟹ XP_017446476

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	58,029,934 - 58,117,338 (-)	NCBI
mRatBN7.2	2	56,301,945 - 56,389,980 (-)	NCBI
Rnor_6.0	2	56,503,002 - 56,592,039 (-)	NCBI

Sequence:

show sequence

ATGTCCTTGTGGTTTCTGATTCTGAAGTGGCCCTATCTTGGAGACCGGGAGAGAATGAAGGAAG
TGCCCCAATTCAGTCCTACTCTGTGGAATTCATTAGATTTTGACAAGAGCTGGACCATAATCCA
AGAGCGCCTGCAGATGGACTCCATGGTTATCAAAGGCCTTGATCCAGACACCAACTACCAGTTT
GCTGTGAGAGCCATGAATGCCTATGGCTTCAGTCTGCGCAGCCAGCCCAGCAACACCATCCGAA
CTCTGGGTCCTGGGGAGGCTGGAAGTGGCCGCTATGGACCTGGGTATATCACCGATACCGGCGT
GAGTGAGGATGACGATGCATCAGAAGACGAGCTAGATCTGGATGTCTCCTTTGAGGAGGTTAAA
CCACTTCCTGCTACCAAAGTTGGGAATAAGAAGTCCAAGAAGACTTCTGTCTCCAACTCAGAGA
TGGACTCCAGACTTGCCCAACCTACCTCAGCATCTCTCCCTGAAACTACAGTGGCTGTGCCACC
CACGCCAGCCCAACGGAAGGGGAAGAACAGTGTGGCCGTGATGTCAAGGCTCTTTGACATGTCC
TGTGACGAAACCCTCTGTTCAGCTGACAGCTTCTGTGTCAATGACTACGCCTGGGGAGGCTCAC
GATGCCATTGCAACCTGGGCAAAGGAGGCGAGGCCTGCTCAGAAGATATCTTTATTCAGTATCC
ACAGTTCTTTGGCCACTCCTATGTAACCTTTGAGCCTCTGAAGAACTCTTATCAGGCATTTCAG
ATTACTCTGGAATTCAGGGCAGAGGCAGAAGATGGCTTACTGCTCTACTGTGGGGAGAGTGAAC
ATGGGAGAGGAGACTTCATGTCCCTGGCTCTCATCCGACGCTCCCTCCACTTCAGGTTTAATTG
TGGAACTGGGATGGCCATCATCATAAGTGAGACCAAAATCAAGCTTGGGGCCTGGCACTCGGTG
ACACTGTATAGAGATGGGCTGAACGGGCTGCTGCAGTTGAACAATGGCACCCCAGTAACAGGCC
AGTCCCAGGGTCAGTACAGTAAAATTACCTTCCGGACACCTCTGTACCTTGGTGGTGCTCCCAG
TGCTTACTGGCTGGTCAGAGCGACGGGGACAAATCGTGGCTTCCAAGGCTGTGTGCAGTCACTT
GCTGTTAACGGGAAGAAGATTGACATGAGGCCCTGGCCACTGGGGAAAGCCCTCAACGGAGCTG
ATGTTGGGGAGTGCAGCAGTGGGATCTGTGATGAAGCCTCCTGCATCAACGGGGGCACCTGCGC
AGCCATCAAGGCCGACTCCTACATCTGCCTCTGTCCCCTTGGGTTCAGAGGTCGACACTGTGAA
GATGCATTTACCCTGACCATTCCTCAGTTCAGAGAGTCGCTGAGGTCCTACGCTGCCACGCCCT
GGCCCCTGGAGCCTCAGCACTATCTTTCTTTCACCGAGTTTGAGATCACATTTCGGCCAGACTC
CGGGGATGGGGTCCTTTTGTACAGCTACGACACAAGCAGCAAGGACTTCCTGTCCATTATTATG
GCTGCAGGCCATGTGGAATTCCGCTTCGACTGTGGTTCTGGGACCGGAGTTCTCAGGAGTGAGG
ATACCCTCACCCTAGGCCAATGGCATGACCTACGCGTGTCTCGCACAGCGAAGAATGGGATCTT
ACAGGTGGACAAGCAGAAGGTAGTAGAAGGAATGGCAGAGGGAGGCTTCACCCAGATTAAGTGT
AATACAGACATTTTTATTGGCGGAGTCCCAAATTACGATGATGTCAAGAAGAACTCGGGTATCC
TCCATCCATTTAGTGGGAGCATCCAGAAGATCATCCTAAATGACCGGACCATCCATGTGAGGCA
CGACTTTACATCTGGTGTGAATGTGGAGAACGCAGCGCACCCCTGTGTGGGGGCCCCCTGTGCC
CATGGGGGCAGCTGTAGGCCCAGGAAGGAGGGTTATGAGTGTGACTGTCCCTTGGGCTTCGAAG
GCCTGAACTGCCAGAAAGAGTGTGGAAACTACTGCCTCAATACGATTACAGAAGCCATTGAGAT
CCCACAGTTCATCGGTCGGAGTTACCTGACCTATGACAACCCAAATATCCTCAAGAGGGTGTCC
GGATCAAGGTCAAATGCTTTCATGAGGTTTAAGACAACCGCCAAGGACGGCCTGTTGCTGTGGA
GGGGGGACAGCCCCATGAGACCTAACAGCGACTTCATTTCCCTGGGTCTTCGGGATGGAGCCCT
GGTGTTCAGCTACAACCTGGGCAGTGGTGTGGCTTCCATTATGGTGAATGGTTCCTTCAGCGAT
GGCCGGTGGCACCGAGTCAAGGCTGTCAGGGATGGCCAGTCTGGGAAAATTACGGTGGATGACT
ATGGAGCCAGAACAGGCAAGTCACCTGGCATGATGAGGCAACTTAACATCAATGGGGCTCTGTA
TGTGGGTGGAATGAAGGAAATTGCTCTGCACACGAACAGACAGTACATGCGAGGCCTTGTGGGC
TGCATCTCCCATTTCACATTGTCCACCGATTACCACATTTCCCTTGTGGAAGACGCTGTGGATG
GGAAGAACATCAACACTTGTGGGGCTAAGTAACACCAGCTGGCCTTGCCCAAGGGACATTGACA
GCCTCTATCCTGAAATCCCAGGGGCCCAGAGACCCTGCCTGATGCTGCACTCAGAGGTCTTGAA
ATCAGGTGTGTTTACTTTCATCGAGGACAAAGTGCGCCCTGGTGAGAGCCAAGACTGAAGGCCC
TGAGTGGCCTTCTCTGCTAAAGCCCTGTGGACCAAACCCAATGGACTACTGTGGATAGGAAGCA
TTGGACTTTGTCACTCGACGTATAGAGTCTGTGAGAGATGGTATCAGTGCACGCTCTGGAAAAA
CTCTGCTGTAGCTCAATGGCTGTGCTGTATTAGAGAGAGCCAGACTGGGTGAGAAAGAGTGAAT
GAGTGAATGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGCACAGAGATAAGCAGAGAGAGAC
AGACACCCCTCTGAATAATATTAAAATATTTTTGCTCTTCCTTGACTTATGACGCTAGCAGAAT
GACTGTGTGACCCTGAATTTCATACTTCCAATCTTGGTCTATGGATTGTGTAGATTAACCCCTT
CCATGCCTCGCTGGCTGACTCAATGTGCTCTGTCTAGTCCGTGAAAATAAAAGTCAGGGGGCAA
ATTAAACATATAATAATAATCAGACTGTGACCTCCTTCCCCCAAGCTTACCTCTAAGGCAAATA
TTCTTTTTTTATGATGCAGAGTGAAGAAGGTGGGTCCCCTGATTTTGTAGCTGTACATTTTGTA
TGTGTCTCTTTTTATAGCTGCAGACTGTACACCTCATGGTGTGCTTTGGAAAGTTAGTGGCTGA
TCTGCCTCATGGCAAACCTTCCTAATAGTTTTCCCACAAAGGACACATGGTCGAGCCGCTTGTA
GTGTCGGTGGAGTGGTAGAGAGTGACTAGGGTGGGCTACTGGCAGAAGGGACCATTCTCTTTCA
GTCTATGCTGATGGTTCAATATATGCTGATGCGTCCTACGA

hide sequence

Protein Sequences


Protein RefSeqs	NP_001102408	(Get FASTA)	NCBI Sequence Viewer
	XP_006232075	(Get FASTA)	NCBI Sequence Viewer
	XP_017446476	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAI68173	(Get FASTA)	NCBI Sequence Viewer
	B4F785	(Get FASTA)	NCBI Sequence Viewer
	EDL75697	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000016722
	ENSRNOP00000091969

RefSeq Acc Id:	NP_001102408 ⟸ NM_001108938
- Peptide Label:	precursor
- UniProtKB:	B4F785 (UniProtKB/Swiss-Prot), A6KGG7 (UniProtKB/TrEMBL), G3V7M7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MDLISTFLLHFLLLACSLPPGAVSLRTALRKSGKVGPPLDIKLGALNCTAFSIQWKTPKRSGSS IVGYTVFYSELGSDKSLREQSHNVPVGQDTLITEEVIGDLKPGTEYRVSIAAYSQTGKGRLSFP RHVTTLSQDSCLPPEAPHQPHVLVVSDSEVALSWRPGENEGSAPIQSYSVEFIRPDFDKSWTII QERLQMDSMVIKGLDPDTNYQFAVRAMNAYGFSLRSQPSNTIRTLGPGEAGSGRYGPGYITDTG VSEDDDASEDELDLDVSFEEVKPLPATKVGNKKSKKTSVSNSEMDSRLAQPTSASLPETTVAVP PTPAQRKGKNSVAVMSRLFDMSCDETLCSADSFCVNDYAWGGSRCHCNLGKGGEACSEDIFIQY PQFFGHSYVTFEPLKNSYQAFQITLEFRAEAEDGLLLYCGESEHGRGDFMSLALIRRSLHFRFN CGTGMAIIISETKIKLGAWHSVTLYRDGLNGLLQLNNGTPVTGQSQGQYSKITFRTPLYLGGAP SAYWLVRATGTNRGFQGCVQSLAVNGKKIDMRPWPLGKALNGADVGECSSGICDEASCINGGTC AAIKADSYICLCPLGFRGRHCEDAFTLTIPQFRESLRSYAATPWPLEPQHYLSFTEFEITFRPD SGDGVLLYSYDTSSKDFLSIIMAAGHVEFRFDCGSGTGVLRSEDTLTLGQWHDLRVSRTAKNGI LQVDKQKVVEGMAEGGFTQIKCNTDIFIGGVPNYDDVKKNSGILHPFSGSIQKIILNDRTIHVR HDFTSGVNVENAAHPCVGAPCAHGGSCRPRKEGYECDCPLGFEGLNCQKAITEAIEIPQFIGRS YLTYDNPNILKRVSGSRSNAFMRFKTTAKDGLLLWRGDSPMRPNSDFISLGLRDGALVFSYNLG SGVASIMVNGSFSDGRWHRVKAVRDGQSGKITVDDYGARTGKSPGMMRQLNINGALYVGGMKEI ALRTNRQYMRGLVGCISHFTLSTDYHISLVEDAVDGKNINTCGAK hide sequence

RefSeq Acc Id:	XP_006232075 ⟸ XM_006232013
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I6GJD5 (UniProtKB/TrEMBL), A6KGG7 (UniProtKB/TrEMBL), G3V7M7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MDLISTFLLHFLLLACSLPPGAVSLRTALRKSGKVGPPLDIKLGALNCTAFSIQWKTPKRSGSS IVGYTVFYSELGSDKSLREQSHNVPVGQDTLITEEVIGDLKPGTEYRVSIAAYSQTGKGRLSFP RHVTTLSQDSCLPPEAPHQPHVLVVSDSEVALSWRPGENEGSAPIQSYSVEFIRPDFDKSWTII QERLQMDSMVIKGLDPDTNYQFAVRAMNAYGFSLRSQPSNTIRTLGPGEAGSGRYGPGYITDTG VSEDDDASEDELDLDVSFEEVKPLPATKVGNKKSKKTSVSNSEMDSRLAQPTSASLPETTVAVP PTPAQRKGKNSVAVMSRLFDMSCDETLCSADSFCVNDYAWGGSRCHCNLGKGGEACSEDIFIQY PQFFGHSYVTFEPLKNSYQAFQITLEFRAEAEDGLLLYCGESEHGRGDFMSLALIRRSLHFRFN CGTGMAIIISETKIKLGAWHSVTLYRDGLNGLLQLNNGTPVTGQSQGQYSKITFRTPLYLGGAP SAYWLVRATGTNRGFQGCVQSLAVNGKKIDMRPWPLGKALNGADVGECSSGICDEASCINGGTC AAIKADSYICLCPLGFRGRHCEDAFTLTIPQFRESLRSYAATPWPLEPQHYLSFTEFEITFRPD SGDGVLLYSYDTSSKDFLSIIMAAGHVEFRFDCGSGTGVLRSEDTLTLGQWHDLRVSRTAKNGI LQVDKQKVVEGMAEGGFTQIKCNTDIFIGGVPNYDDVKKNSGILHPFSGSIQKIILNDRTIHVR HDFTSGVNVENAAHPCVGAPCAHGGSCRPRKEGYECDCPLGFEGLNCQKECGNYCLNTITEAIE IPQFIGRSYLTYDNPNILKRVSGSRSNAFMRFKTTAKDGLLLWRGDSPMRPNSDFISLGLRDGA LVFSYNLGSGVASIMVNGSFSDGRWHRVKAVRDGQSGKITVDDYGARTGKSPGMMRQLNINGAL YVGGMKEIALHTNRQYMRGLVGCISHFTLSTDYHISLVEDAVDGKNINTCGAK hide sequence

RefSeq Acc Id:	XP_017446476 ⟸ XM_017590987
- Peptide Label:	isoform X2
- UniProtKB:	A6KGG7 (UniProtKB/TrEMBL), G3V7M7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSLWFLILKWPYLGDRERMKEVPQFSPTLWNSLDFDKSWTIIQERLQMDSMVIKGLDPDTNYQF AVRAMNAYGFSLRSQPSNTIRTLGPGEAGSGRYGPGYITDTGVSEDDDASEDELDLDVSFEEVK PLPATKVGNKKSKKTSVSNSEMDSRLAQPTSASLPETTVAVPPTPAQRKGKNSVAVMSRLFDMS CDETLCSADSFCVNDYAWGGSRCHCNLGKGGEACSEDIFIQYPQFFGHSYVTFEPLKNSYQAFQ ITLEFRAEAEDGLLLYCGESEHGRGDFMSLALIRRSLHFRFNCGTGMAIIISETKIKLGAWHSV TLYRDGLNGLLQLNNGTPVTGQSQGQYSKITFRTPLYLGGAPSAYWLVRATGTNRGFQGCVQSL AVNGKKIDMRPWPLGKALNGADVGECSSGICDEASCINGGTCAAIKADSYICLCPLGFRGRHCE DAFTLTIPQFRESLRSYAATPWPLEPQHYLSFTEFEITFRPDSGDGVLLYSYDTSSKDFLSIIM AAGHVEFRFDCGSGTGVLRSEDTLTLGQWHDLRVSRTAKNGILQVDKQKVVEGMAEGGFTQIKC NTDIFIGGVPNYDDVKKNSGILHPFSGSIQKIILNDRTIHVRHDFTSGVNVENAAHPCVGAPCA HGGSCRPRKEGYECDCPLGFEGLNCQKECGNYCLNTITEAIEIPQFIGRSYLTYDNPNILKRVS GSRSNAFMRFKTTAKDGLLLWRGDSPMRPNSDFISLGLRDGALVFSYNLGSGVASIMVNGSFSD GRWHRVKAVRDGQSGKITVDDYGARTGKSPGMMRQLNINGALYVGGMKEIALHTNRQYMRGLVG CISHFTLSTDYHISLVEDAVDGKNINTCGAK hide sequence

Ensembl Acc Id:

ENSRNOP00000016722 ⟸ ENSRNOT00000016722

Ensembl Acc Id:

ENSRNOP00000091969 ⟸ ENSRNOT00000104810

Ensembl Acc Id:

ENSRNOP00000112648 ⟸ ENSRNOT00000168288

Ensembl Acc Id:

ENSRNOP00000109141 ⟸ ENSRNOT00000172119

Ensembl Acc Id:

ENSRNOP00000102334 ⟸ ENSRNOT00000138659

Protein Domains

EGF-like Fibronectin type-III Laminin G Laminin G-like

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-B4F785-F1-model_v2	AlphaFold	B4F785	1-1005	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13691173

Promoter ID:

EPDNEW_R1698

Type:

single initiation site

Name:

Egflam_1

Description:

EGF-like, fibronectin type III and laminin G domains

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	2	56,679,925 - 56,679,985	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1306592	AgrOrtholog
BioCyc Gene	G2FUF-54146	BioCyc
Ensembl Genes	ENSRNOG00000012058	Ensembl, ENTREZGENE
Ensembl Transcript	ENSRNOT00000016722	ENTREZGENE
	ENSRNOT00000104810	ENTREZGENE
Gene3D-CATH	2.60.120.200	UniProtKB/Swiss-Prot
	2.60.40.10	UniProtKB/Swiss-Prot
	Laminin	UniProtKB/Swiss-Prot
InterPro	ConA-like_dom_sf	UniProtKB/Swiss-Prot
	EGF-like_Ca-bd_dom	UniProtKB/Swiss-Prot
	EGF-like_dom	UniProtKB/Swiss-Prot
	EGF_Pikachurin	UniProtKB/Swiss-Prot
	FN3_dom	UniProtKB/Swiss-Prot
	FN3_sf	UniProtKB/Swiss-Prot
	Ig-like_fold	UniProtKB/Swiss-Prot
	Laminin_G	UniProtKB/Swiss-Prot
	Neurexin-related_CASP	UniProtKB/Swiss-Prot
KEGG Report	rno:365691	UniProtKB/Swiss-Prot
NCBI Gene	365691	ENTREZGENE
PANTHER	PIKACHURIN	UniProtKB/Swiss-Prot
	PIKACHURIN-LIKE PROTEIN	UniProtKB/Swiss-Prot
Pfam	EGF	UniProtKB/Swiss-Prot
	EGF_Pikachurin	UniProtKB/Swiss-Prot
	fn3	UniProtKB/Swiss-Prot
	Laminin_G_1	UniProtKB/Swiss-Prot
	Laminin_G_2	UniProtKB/Swiss-Prot
PhenoGen	Egflam	PhenoGen
PROSITE	EGF_1	UniProtKB/Swiss-Prot
	EGF_2	UniProtKB/Swiss-Prot
	EGF_3	UniProtKB/Swiss-Prot
	FN3	UniProtKB/Swiss-Prot
	LAM_G_DOMAIN	UniProtKB/Swiss-Prot
RatGTEx	ENSRNOG00000012058	RatGTEx
SMART	EGF	UniProtKB/Swiss-Prot
	EGF_CA	UniProtKB/Swiss-Prot
	FN3	UniProtKB/Swiss-Prot
	LamG	UniProtKB/Swiss-Prot
Superfamily-SCOP	SSF49265	UniProtKB/Swiss-Prot
	SSF49899	UniProtKB/Swiss-Prot
UniProt	A0A8I6GJD5	ENTREZGENE, UniProtKB/TrEMBL
	A0ABK0LFX8_RAT	UniProtKB/TrEMBL
	A0ABK0LSZ8_RAT	UniProtKB/TrEMBL
	A0ABK0M9H7_RAT	UniProtKB/TrEMBL
	A6KGG7	ENTREZGENE, UniProtKB/TrEMBL
	B4F785	ENTREZGENE, UniProtKB/Swiss-Prot
	G3V7M7	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2008-03-07	Egflam	EGF-like, fibronectin type III and laminin G domains	RGD1306592_predicted	similar to Agrin (predicted)	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2005-01-20	RGD1306592_predicted	similar to Agrin (predicted)	LOC365691_predicted		Symbol and Name status set to approved	1331353	APPROVED
2005-01-12	LOC365691_predicted	similar to Agrin (predicted)			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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