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Gene: Rin2 (Ras and Rab interactor 2) Rattus norvegicus

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Symbol:

Rin2

Name:

Ras and Rab interactor 2

RGD ID:

1305873

Description:

Predicted to enable guanyl-nucleotide exchange factor activity and small GTPase binding activity. Predicted to be involved in positive regulation of endothelial cell migration; positive regulation of endothelial cell-matrix adhesion via fibronectin; and positive regulation of vasculogenesis. Predicted to be located in cytoplasm. Predicted to be active in cytosol and endocytic vesicle. Orthologous to human RIN2 (Ras and Rab interactor 2); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 4-amino-2,6-dinitrotoluene; 6-propyl-2-thiouracil.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

LOC311494

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	RIN2 (Ras and Rab interactor 2)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OrthoDB, Panther, Treefam
Mus musculus (house mouse):	Rin2 (Ras and Rab interactor 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Rin2 (Ras and Rab interactor 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	RIN2 (Ras and Rab interactor 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	RIN2 (Ras and Rab interactor 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Rin2 (Ras and Rab interactor 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	RIN2 (Ras and Rab interactor 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	RIN2 (Ras and Rab interactor 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Rin2 (Ras and Rab interactor 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Rin2 (Ras and Rab interactor 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	RIN2 (Ras and Rab interactor 2)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Rin2 (Ras and Rab interactor 2)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	rin2 (Ras and Rab interactor 2)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	si:ch211-85n16.4	Alliance	DIOPT (Ensembl Compara\|OrthoFinder\|PANTHER\|PhylomeDB)
Caenorhabditis elegans (roundworm):	rin-1	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB)
Caenorhabditis elegans (roundworm):	rin-1	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Drosophila melanogaster (fruit fly):	spri	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	spri	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	rin2	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	cox7b	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	3	153,540,147 - 153,756,897 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	3	153,540,214 - 153,756,897 (+)	Ensembl				GRCr8
mRatBN7.2	3	133,086,858 - 133,303,604 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	3	133,086,749 - 133,303,604 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	3	137,019,265 - 137,213,109 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	3	145,603,344 - 145,797,204 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	3	143,306,511 - 143,500,360 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	3	139,871,330 - 140,087,679 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	3	139,894,331 - 140,087,678 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	3	146,294,631 - 146,510,343 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	3	134,307,538 - 134,503,915 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	3	131,974,768 - 132,168,991 (+)	NCBI		Celera
RGSC_v3.1	3	134,383,397 - 134,408,088 (+)	NCBI
Cytogenetic Map	3	q41	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

genetic disease (ISO)

Macrocephaly, Alopecia, Cutis Laxa, and Scoliosis (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

17beta-estradiol (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

4,4'-sulfonyldiphenol (ISO)

4-amino-2,6-dinitrotoluene (EXP)

4-hydroxyphenyl retinamide (ISO)

6-propyl-2-thiouracil (EXP)

aflatoxin B1 (ISO)

Aflatoxin B2 alpha (ISO)

all-trans-retinoic acid (EXP,ISO)

amitrole (EXP)

arsane (ISO)

arsenic atom (ISO)

azathioprine (ISO)

benzo[a]pyrene (ISO)

benzo[a]pyrene diol epoxide I (ISO)

benzo[b]fluoranthene (ISO)

benzo[e]pyrene (ISO)

bisphenol A (EXP,ISO)

cadmium dichloride (ISO)

calcitriol (ISO)

cannabidiol (ISO)

carbon nanotube (ISO)

chlordecone (ISO)

choline (ISO)

cisplatin (ISO)

cobalt dichloride (ISO)

copper(II) sulfate (ISO)

cyclosporin A (ISO)

DDE (ISO)

dibutyl phthalate (EXP,ISO)

diuron (EXP)

dorsomorphin (ISO)

doxorubicin (ISO)

endosulfan (EXP)

entinostat (ISO)

ethanol (ISO)

ethyl methanesulfonate (ISO)

flutamide (EXP)

fluvastatin (ISO)

folic acid (ISO)

formaldehyde (ISO)

gentamycin (EXP)

glafenine (EXP)

hydrogen peroxide (ISO)

L-methionine (ISO)

lipopolysaccharide (ISO)

manganese atom (ISO)

manganese(0) (ISO)

manganese(II) chloride (EXP,ISO)

methapyrilene (ISO)

methimazole (EXP)

methyl methanesulfonate (ISO)

methylmercury chloride (ISO)

nimesulide (EXP)

okadaic acid (ISO)

oxaliplatin (EXP)

paracetamol (EXP,ISO)

pirinixic acid (ISO)

quercetin (ISO)

S-(1,2-dichlorovinyl)-L-cysteine (ISO)

Salinomycin (ISO)

SB 431542 (ISO)

silicon dioxide (ISO)

sodium arsenate (ISO)

sodium arsenite (ISO)

sodium dichromate (ISO)

sulfadimethoxine (EXP)

testosterone (ISO)

tetrachloromethane (EXP,ISO)

tetraphene (ISO)

thiram (ISO)

topotecan (EXP)

trichloroethene (EXP)

trichostatin A (ISO)

trimellitic anhydride (ISO)

triptonide (ISO)

tris(2-butoxyethyl) phosphate (ISO)

urethane (ISO)

valproic acid (ISO)

vinclozolin (EXP)

zoledronic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

positive regulation of endothelial cell migration (ISO)

positive regulation of endothelial cell-matrix adhesion (ISO)

positive regulation of vasculogenesis (ISO)

signal transduction (IEA)

vesicle-mediated transport (IEA)

Cellular Component

cytoplasm (IEA)

cytosol (IBA)

endocytic vesicle (IBA)

Molecular Function

GTPase activator activity (IEA)

guanyl-nucleotide exchange factor activity (IBA,IEA)

small GTPase binding (IBA)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Rat ISS GO annotations from GOA human gene data--August 2006	GOA data from the GO Consortium
3.	OMIM Disease Annotation Pipeline	OMIM Disease Annotation Pipeline
4.	GOA pipeline	RGD automated data pipeline
5.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
6.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:22825554

Genomics

Comparative Map Data

Rin2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	3	153,540,147 - 153,756,897 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	3	153,540,214 - 153,756,897 (+)	Ensembl				GRCr8
mRatBN7.2	3	133,086,858 - 133,303,604 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	3	133,086,749 - 133,303,604 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	3	137,019,265 - 137,213,109 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	3	145,603,344 - 145,797,204 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	3	143,306,511 - 143,500,360 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	3	139,871,330 - 140,087,679 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	3	139,894,331 - 140,087,678 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	3	146,294,631 - 146,510,343 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	3	134,307,538 - 134,503,915 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	3	131,974,768 - 132,168,991 (+)	NCBI		Celera
RGSC_v3.1	3	134,383,397 - 134,408,088 (+)	NCBI
Cytogenetic Map	3	q41	NCBI

RIN2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	20	19,757,599 - 20,002,456 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	20	19,757,606 - 20,003,571 (+)	Ensembl			hg38	GRCh38
GRCh37	20	19,738,902 - 19,983,100 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	20	19,818,210 - 19,931,100 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	20	19,818,209 - 19,931,100	NCBI
Celera	20	19,944,265 - 20,057,119 (+)	NCBI		Celera
Cytogenetic Map	20	p11.23	NCBI
HuRef	20	19,829,693 - 19,944,819 (+)	NCBI		HuRef
CHM1_1	20	19,867,581 - 19,983,477 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	20	19,809,879 - 20,056,735 (+)	NCBI		T2T-CHM13v2.0

Rin2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	2	145,613,647 - 145,729,536 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	2	145,517,135 - 145,729,536 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	2	145,771,727 - 145,887,616 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	2	145,675,215 - 145,887,616 (+)	Ensembl			mm10	GRCm38
MGSCv37	2	145,611,852 - 145,713,352 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	2	145,477,584 - 145,579,054 (+)	NCBI		MGSCv36	mm8
Celera	2	147,020,636 - 147,123,470 (+)	NCBI		Celera
Cytogenetic Map	2	G1	NCBI
cM Map	2	71.25	NCBI

Rin2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955415	27,984,449 - 28,133,214 (+)	Ensembl
ChiLan1.0	NW_004955415	27,953,670 - 28,130,122 (+)	NCBI	ChiLan1.0	ChiLan1.0

RIN2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	21	20,644,990 - 20,890,589 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	20	20,683,986 - 20,887,426 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	20	19,716,071 - 19,960,598 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	20	19,683,013 - 19,925,764 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	20	19,811,284 - 19,924,256 (+)	Ensembl			panPan2	panpan1.1

RIN2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	24	3,345,221 - 3,563,716 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	24	3,343,087 - 3,563,772 (-)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	24	3,373,428 - 3,591,885 (-)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	24	3,753,523 - 3,972,256 (-)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	24	3,751,358 - 3,944,655 (-)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	24	3,349,198 - 3,567,538 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	24	3,452,567 - 3,671,029 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	24	3,730,425 - 3,949,191 (-)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Rin2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024408640	151,946,228 - 152,171,904 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936485	377,396 - 556,616 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936485	377,562 - 556,611 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

RIN2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	17	27,807,244 - 28,058,135 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	17	27,941,333 - 28,058,150 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	17	32,441,716 - 32,456,755 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

RIN2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	2	48,768,647 - 49,020,208 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	2	48,905,779 - 49,021,368 (+)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666078	3,553,322 - 3,805,798 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Rin2
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624741	20,441,972 - 20,536,464 (+)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624741	20,338,306 - 20,537,500 (+)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Rin2
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	5	125,397,527 - 125,524,191 (+)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Rin2
587 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	236
Count of miRNA genes:	138
Interacting mature miRNAs:	174
Transcripts:	ENSRNOT00000064695
Prediction methods:	Microtar, Miranda, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
12879876	Bw182	Body weight QTL 182		0.003	body mass (VT:0001259)	body weight (CMO:0000012)	3	141555229	186555229	Rat
2301411	Bp320	Blood pressure QTL 320		0.001	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	3	141555229	186555229	Rat
1582233	Insul10	Insulin level QTL 10	5.4	0.0015	blood insulin amount (VT:0001560)	serum insulin level times blood glucose level (CMO:0002040)	3	133259579	178259579	Rat
12879872	Cm97	Cardiac mass QTL 97		0.001	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	3	141555229	186555229	Rat
12879873	Cm96	Cardiac mass QTL 96		0.001	heart mass (VT:0007028)	heart wet weight to body weight ratio (CMO:0002408)	3	141555229	186555229	Rat
1578653	Vnigr3	Vascular neointimal growth QTL 3	3.1		artery morphology trait (VT:0002191)	artery neointimal hyperplastic lesion area (CMO:0001414)	3	151075912	189428310	Rat
2302373	Gluco39	Glucose level QTL 39	5.01		blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	3	129154923	182114333	Rat
12879874	Cm98	Cardiac mass QTL 98		0.005	heart right ventricle mass (VT:0007033)	heart right ventricle weight to body weight ratio (CMO:0000914)	3	141555229	186555229	Rat
12879875	Kidm64	Kidney mass QTL 64		0.001	kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	3	141555229	186555229	Rat
70216	Cm14	Cardiac mass QTL 14	2.1		heart mass (VT:0007028)	heart wet weight (CMO:0000069)	3	51581665	184004958	Rat
2292591	Esta4	Estrogen-induced thymic atrophy QTL 4			thymus mass (VT:0004954)	thymus wet weight (CMO:0000855)	3	67641776	167835660	Rat
1358362	Srcrt2	Stress Responsive Cort QTL 2	2.78		blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	3	58601291	153936591	Rat
1578754	Stresp16	Stress response QTL 16	4	0.001	blood renin amount (VT:0003349)	plasma renin activity level (CMO:0000116)	3	133134628	178134628	Rat
1300173	Rf11	Renal function QTL 11	3.38		renal blood flow trait (VT:2000006)	absolute change in renal blood flow rate (CMO:0001168)	3	141508991	166376254	Rat
9589106	Insul23	Insulin level QTL 23	13.86	0.001	blood insulin amount (VT:0001560)	plasma insulin level (CMO:0000342)	3	152055202	189428310	Rat
8694437	Bw167	Body weight QTL 167	22.46	0.001	retroperitoneal fat pad mass (VT:0010430)	retroperitoneal fat pad weight to body weight ratio (CMO:0000635)	3	112250810	157250810	Rat
10755461	Coatc16	Coat color QTL 16			coat/hair pigmentation trait (VT:0010463)	pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)	3	142898802	187898802	Rat
8662816	Vetf4	Vascular elastic tissue fragility QTL 4	4		renal artery integrity trait (VT:0010642)	number of ruptures of the internal elastic lamina of the renal arteries (CMO:0002563)	3	79649560	177741895	Rat
1559282	Emca5	Estrogen-induced mammary cancer QTL 5	3.9		mammary gland integrity trait (VT:0010552)	percentage of study population developing mammary tumors during a period of time (CMO:0000948)	3	145335553	189428310	Rat
1354611	Despr2	Despair related QTL 2	3.03	0.0028	locomotor behavior trait (VT:0001392)	amount of time spent in voluntary immobility (CMO:0001043)	3	117537367	162537367	Rat
2303620	Vencon4	Ventilatory control QTL 4	3.9		respiration trait (VT:0001943)	tidal volume (CMO:0000222)	3	125116475	170116475	Rat
631649	Bp123	Blood pressure QTL 123	3.2		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	3	110225882	155225882	Rat
1358204	Insglur1	Insulin/glucose ratio QTL 1	3.8		blood glucose amount (VT:0000188)	serum glucose level (CMO:0000543)	3	136091420	155634702	Rat
1576306	Schws3	Schwannoma susceptibility QTL 3		0.001	nervous system integrity trait (VT:0010566)	percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017)	3	139299381	184299381	Rat
5686842	Rf59	Renal function QTL 59			urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	3	122395989	167395989	Rat
1300159	Kidm4	Kidney mass QTL 4	3.83		kidney mass (VT:0002707)	right kidney wet weight to body weight ratio (CMO:0001953)	3	141508991	177728348	Rat
2301971	Cm71	Cardiac mass QTL 71	4.63		heart left ventricle mass (VT:0007031)	heart left ventricle weight (CMO:0000776)	3	131036586	176036586	Rat
631673	Iddm13	Insulin dependent diabetes mellitus QTL 13	1.3	0.663	blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	3	137114333	182114333	Rat
2301970	Bw81	Body weight QTL 81	5.19		body mass (VT:0001259)	body weight (CMO:0000012)	3	131036586	176036586	Rat
1581546	Pur13	Proteinuria QTL 13	2.93	0.0335	urine total protein amount (VT:0000032)	urine protein excretion rate (CMO:0000759)	3	98651826	167012663	Rat
1578666	Vnigr1	Vascular neointimal growth QTL 1	4.6		artery morphology trait (VT:0002191)	artery lumen area (CMO:0001409)	3	151075912	189428310	Rat
1578656	Vnigr2	Vascular neointimal growth QTL 2	4.2		artery morphology trait (VT:0002191)	lesioned artery residual lumen area (CMO:0001417)	3	151075912	189428310	Rat
1331758	Bp207	Blood pressure QTL 207	2.848		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	3	110634702	155634702	Rat
12879871	Am7	Aortic mass QTL 7		0.001	aorta mass (VT:0002845)	aorta weight to aorta length to body weight ratio (CMO:0002722)	3	141555229	186555229	Rat
631541	Bp81	Blood pressure QTL 81	4		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	3	144575244	189428310	Rat
724532	Cm17	Cardiac mass QTL 17	2		heart mass (VT:0007028)	calculated heart weight (CMO:0000073)	3	116188400	161188400	Rat

Markers in Region

D3Rat217

Rat Assembly	Chr	Position (strand)	Source	JBrowse
GRCr8	3	153,746,295 - 153,746,477 (+)	Marker Load Pipeline
mRatBN7.2	3	133,293,002 - 133,293,184 (+)	MAPPER	mRatBN7.2
Rnor_6.0	3	140,077,066 - 140,077,247	NCBI	Rnor6.0
Rnor_5.0	3	146,499,815 - 146,499,996	UniSTS	Rnor5.0
RGSC_v3.4	3	134,492,358 - 134,492,539	UniSTS	RGSC3.4
RGSC_v3.4	3	134,491,977 - 134,492,553	RGD	RGSC3.4
RGSC_v3.1	3	134,397,931 - 134,398,112	RGD
RH 3.4 Map	3	1171.1	UniSTS
RH 3.4 Map	3	1171.1	RGD
SHRSP x BN Map	3	64.1499	UniSTS
SHRSP x BN Map	3	64.1499	RGD
Cytogenetic Map	3	q41	UniSTS

D3Got99

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	3	133,271,252 - 133,271,441 (+)	MAPPER	mRatBN7.2
Rnor_6.0	3	140,055,302 - 140,055,490	NCBI	Rnor6.0
Rnor_5.0	3	146,478,051 - 146,478,239	UniSTS	Rnor5.0
RGSC_v3.4	3	134,470,707 - 134,470,896	RGD	RGSC3.4
RGSC_v3.4	3	134,470,708 - 134,470,896	UniSTS	RGSC3.4
Celera	3	132,136,692 - 132,136,880	UniSTS
RGSC_v3.1	3	134,376,281 - 134,376,469	RGD
RH 3.4 Map	3	1171.0	RGD
RH 3.4 Map	3	1171.0	UniSTS
Cytogenetic Map	3	q41	UniSTS

RH143773

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	3	133,303,127 - 133,303,347 (+)	MAPPER	mRatBN7.2
Rnor_6.0	3	140,087,202 - 140,087,421	NCBI	Rnor6.0
Rnor_5.0	3	146,509,866 - 146,510,085	UniSTS	Rnor5.0
RGSC_v3.4	3	134,503,439 - 134,503,658	UniSTS	RGSC3.4
Celera	3	132,168,515 - 132,168,734	UniSTS
RH 3.4 Map	3	1109.3	UniSTS
Cytogenetic Map	3	q41	UniSTS

RH144685

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	3	133,298,726 - 133,298,876 (+)	MAPPER	mRatBN7.2
Rnor_6.0	3	140,082,801 - 140,082,950	NCBI	Rnor6.0
Rnor_5.0	3	146,505,465 - 146,505,614	UniSTS	Rnor5.0
RGSC_v3.4	3	134,499,038 - 134,499,187	UniSTS	RGSC3.4
Celera	3	132,164,114 - 132,164,263	UniSTS
RH 3.4 Map	3	1171.4	UniSTS
Cytogenetic Map	3	q41	UniSTS

AU047563

Rat Assembly	Chr	Position (strand)	Source	JBrowse
GRCr8	3	153,666,647 - 153,666,906 (+)	Marker Load Pipeline
mRatBN7.2	3	133,213,343 - 133,213,602 (+)	MAPPER	mRatBN7.2
Rnor_6.0	3	138,997,859 - 138,998,117	NCBI	Rnor6.0
Rnor_6.0	3	139,997,624 - 139,997,882	NCBI	Rnor6.0
Rnor_5.0	3	146,420,758 - 146,421,016	UniSTS	Rnor5.0
Rnor_5.0	3	145,426,991 - 145,427,249	UniSTS	Rnor5.0
RGSC_v3.4	3	134,411,913 - 134,412,171	UniSTS	RGSC3.4
Celera	3	132,078,615 - 132,078,873	UniSTS
Cytogenetic Map	3	q41	UniSTS

RH142025

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	3	133,165,321 - 133,165,517 (+)	MAPPER	mRatBN7.2
Rnor_6.0	3	139,949,768 - 139,949,963	NCBI	Rnor6.0
Rnor_5.0	3	146,372,902 - 146,373,097	UniSTS	Rnor5.0
RGSC_v3.4	3	134,362,981 - 134,363,176	UniSTS	RGSC3.4
Celera	3	132,030,214 - 132,030,409	UniSTS
RH 3.4 Map	3	1171.1	UniSTS
Cytogenetic Map	3	q41	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	165	91	90	59	91	59	6	355	191	11	144	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001107786	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001434033	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001434034	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006235142	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006235143	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006235146	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006235147	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006235148	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006235150	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008762270	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008762271	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017591763	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017591764	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017591765	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017591766	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017591767	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017591768	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039105047	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063283805	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063283806	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063283807	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063283808	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	CH474026	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000003	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000064695 ⟹ ENSRNOP00000059327

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	3	153,540,214 - 153,756,889 (+)	Ensembl
mRatBN7.2 Ensembl	3	133,109,884 - 133,303,604 (+)	Ensembl
Rnor_6.0 Ensembl	3	139,894,331 - 140,087,678 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000086409 ⟹ ENSRNOP00000072197

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	3	153,692,938 - 153,756,890 (+)	Ensembl
mRatBN7.2 Ensembl	3	133,086,749 - 133,303,604 (+)	Ensembl
Rnor_6.0 Ensembl	3	140,024,043 - 140,087,672 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000096314 ⟹ ENSRNOP00000083107

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	3	153,666,281 - 153,756,897 (+)	Ensembl
mRatBN7.2 Ensembl	3	133,212,700 - 133,303,604 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000155461 ⟹ ENSRNOP00000106504

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	3	153,648,975 - 153,756,897 (+)	Ensembl

RefSeq Acc Id:

NM_001107786 ⟹ NP_001101256

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	153,563,185 - 153,756,896 (+)	NCBI
mRatBN7.2	3	133,109,884 - 133,303,604 (+)	NCBI
Rnor_6.0	3	139,894,331 - 140,087,678 (+)	NCBI
Rnor_5.0	3	146,294,631 - 146,510,343 (+)	NCBI
RGSC_v3.4	3	134,307,538 - 134,503,915 (+)	RGD
Celera	3	131,974,768 - 132,168,991 (+)	RGD

Sequence:

show sequence

AGCTGGGAAGGTTTAACTCTCCATTGCTTTTGGCCAAAGCAGACTGTTAGAACCATTTACTTCG
TACACAGATAGAACAAAGATGAAAGGGTCTGCAGTCCACTGCAGAGGATGGAGACCTGAGACAG
AAACTCCTGAACTTCCACTGGAAAAGCTCAAATGTGTGAGCCTTCAGAACTCTGCAGAAGACAA
GCCCAAGCTGAAGAGGAGAGAGAGATGCTGGTCTGACAGGAGTCCCCGGCATGCAGTAGAGCCT
CGCTGGGGGAAATGTCAGCTTGGACCATGGGCGCCCGAGGTCTGGACAAGCGAGGAAGTTTCTT
TAAGCTCATTGACACGATCGCCTCGGAGATCGGAGAACTGAAACGGGAGATGGTGCAGACAGAT
GTCAGCCTGGAAAATGGCCTGGAACCTTCTGAAACCTACAGCATGGTGAGACACAAGGATGGTG
GCTATCCTGAAGACAAGGACGGGAAGACATGTCCCCGAGACTCTGGCTATGACAGCCTCTCCAA
CAGGCTCAGCATTCTGGACAGGCTCCTGCATACCCATCCCATATGGCTGCAGCTCAGTCTGAGT
GAGGAGGAGGCAGCAGAGGTCCTGCAGGCCCAGCCTCCAGGGATCTTTTTGGTTCGTAAATCCT
CCAAAATGCAGAAGAAAGTCCTCTCCCTTCGCCTGCCCTGTGAATTTGGAGCACCTCTCAAAGA
GTTTACTATAAAGGAAAGCACGTACACCTTTTCCCTGGAAGGCTCGGGAATCAGCTTTGCAGAT
TTATTCCGGCTCATTGCTTTCTACTGCATCAGCAGGGATGTTCTGCCATTCACCTTGAAGCTGC
CTTATGCCATTTCAACAGCCAAGACGGAGTCTCAACTTGAAGAACTAGCCCAGCTGGGACTAAA
TTTTTGGAGCTCCTCGGCAGACAACAAACCCCCAAACTCCCCACCTCCCCATAGGCCTCTTTCC
TCAGCCGGCATCTGCCCTGCCTCCTTGCGTCAGCTCTGCCTTATAAATGGAGTGCATTCTATAA
AAACCAGGACGCCTTCAGAGTTGGAGTGCAGCCAGACCAACGGAGCCTTGTGTTTTATTAATCC
TCTTTTCTTGAAAGTGCACAGCCAGGACCTCAGCACAGGCCCAAAGCGGCCGAGCACAAGGACT
CCCAACGCGAATGGCACCGAGAGACCTCGGTCCCCGCCACCCAGGCCCCCGCCACCCGCTATTA
ATAGTCTGCACACAAGCCCTGGGCTATCCAGGACTGAACCCCAGACGAGCATGCCAGAAACAGT
CCACCATAGCAAACATGGGAACGTAGCTCTGCTTGGAACAAAACCAACTCCCATCCCTCCACCC
CGGCTGAAGAAGCAGGCTTCTTTTTTGGAAGCGGAAAGCAGCGCCAAGACCTTGACCGCCTGCC
GGCCCGGCCGGAGCCCGCCGGAGCCTGAGCTGGAGCTGGAGGTGGAGATGGGCACAGCTGGGCA
CGCAGGTGGAGCCCCGCCTAGGGACGCCCCCGGGGATTGCACAAGGGCGCCGCCGCCCGACTCT
GAATCACAGCCACCACCGTGCCATGGAGCCAGGCAGAGGCTGAGCGACATGAGCCTTTCCACTT
CCTCCTCGGACTCGCTGGAGTTCGACCGGAGCATGCCCCTGTATGGGTACGAGGCCGACACCAC
CAGCAGCCTGGAGGACTACGAAGGGGAGAGTGACCAGGAGACGATGGCACCTCCCATCAAGTCC
AAAAAGAAGAGGAACAGTTCTTTTGTGCTGCCCAAACTGGTCAAGTCCCAGTTGCGAAAGATGA
GCGGGGTGTTCAGCTCCTTCATGACCCCTGAGAAGCGCATGGTCCGCAGGATCGCCGAGCTGTC
CCGGGACAAATGCACCTATTTCGGGTGTCTGGTGCAGGACTACGTGAGCTTCCTGAAGGAGAAC
AAGGAATGCCATGTGTCCAGCACCGATATGCTGCAGACTATCCGGCAGTTTATGACCCAGGTCA
AGAACTATTTGTCTCAGAGCTCTGAACTGGACCCCCCTATCGAGTCACTGATCCCAGAAGACCA
AATTGATGTGGTGTTGGAGAAGGCCATGCACAAATGCATCTTGAAGCCCCTCAAGGGCCACGTG
GAGGCCATGCTGAAGGACTTCCACACGGCTGATGGCTCGTGGAAACAACTCAAGGAAAACCTAC
AGCTTGTGCGGCAGAGAAACCCGCAGGAGCTGGGGGTCTTTGCTCCAACCCCTGACTTGATGGA
GCTGGAGAAGATCAAGCTGAAATTCATGACCATGCAGAAGATGTATTCGCCAGAAAAGAAAGTC
ATGCTTTTGCTACGGGTCTGTAAGCTCATCTACACTGTCATGGAGAACAACTCAGGGAGGATGT
ACGGGGCGGACGACTTCTTGCCGGTCCTGACCTATGTCATAGCTCAGTGTGATATGCTTGAATT
GGACACTGAAATCGAGTACATGATGGAGCTCCTAGACCCATCACTGCTGCATGGAGAAGGAGGC
TATTACTTGACCAGTGCCTATGGGGCTCTATCTCTGATAAAGAACTTCCAAGAAGAACAGGCTG
CAAGACTGCTCAGCTCAGAAGCCAGGGACACTCTGAGGCAGTGGCACAAGCGGAGAACCACCAA
CCGGACTATCCCCTCCGTGGATGACTTTCAGAATTACCTCCGAGTTGCCTTCCAAGAGGTCAAC
AGTGGATGCACTGGGAAGACTCTCCTTGTGAGACCGTACATCACCACAGAGGATGTGTGTCAGC
TCTGTGCTGAGAAATTTAAGGTGGAGGACCCTGAAGAGTACAGTCTGTTTCTCTTTGTTGATGA
GACATGGCAGCAATTGGCAGAGGACACTTATCCTCAGAAGATCAAGGCTGAGCTGCACAGCCGG
CCTCAGCCCCACATCTTCCACTTTGTGTACAAGCGAATCAAGAGTGATCCTTATGGTGTGATTT
TCCAGAATGGAGATGATCTCACTCCCTCATAGGGGACACATGGGACTTCCTATTGATATATCCA
AAAGGGAGCTGAGAGTCTAGCTTTCTGGCTGCCGCCTGTTTGAGCTTAGAAGACAGCCACCTCC
TCAAGGATCCCTCAGTTCAGTGACTAAGCCATCCGTAGGCTGACTTGGCTAAGGGCATCCTTTA
GATACATTGCCCAGATGAGGTAGCTGTGATTTGGAAAATAGTAAGACTCTCCTCCAGAAATGGT
GAATTGCATTTAATGGTTCAGATGTCCTGAGTTCACTGGCTAGTTAACTAGTTAACCTTAGCCA
GCTTCGAGGTTGGCTTACACATGTGTATGTGTGCTGAGGAAACACTTAAGGTACAAATTCTTCT
CTTGGATTCGATATTAAGTGTTGACAAGACTGTCCGATGCAGTGCGTCCGATACCTCTCAGCTC
TGTGGATGGCTCCCTCCTTCCCTCTTTCCCTTCTTTCCTCCATCCTTCATCCTATACTTTTTTT
TTTTTACAAAGAGCCTTTGTGTTTTTATATATTTCATAGAAAAATTTATAGCAGTTGCAGGTAA
ACTGTCAGGATTGGTTTTTAAAATATTTTTGTAACTTTAAAAATATTCTATAAGTATGCATGTG
ATTTAACATTTAATATTTGAAGATGAATCTCTTGCTGGATTTGAGAGTACTGCATTTTAGACGC
CTCTTAGATGTCTCTCTTTTGTAACTGGATGTTTCTGCAAATTTGTGGGGAGAGACTTCTGATT
GTCTTAGAGCAATCCCTGACTGGCCACAGGCGGCCTTTGAAAAAATAAACCGGGTGTACTGTTA
CATTGTTCTCTTTTAGTGCTAGTGTACCTTTTGTTGTGTTTGTTTTTTAAGCAATCAATGTTGA
GAATTAGGAGAGAAACGAATGTAGAGAGAGGTAGAGAGAGAAACACAGACTCTAAGGAGGGGCT
GAGGAACGTAGTCTGCAGGTTCAGGCTCTTTGGAGGACATAGAGAAAAGGAGTCAGTACTGTAA
GATATGTGCTACAGTGAGTTTTGACAAAGACCTGTTCCATATGCTATGTGCTCTGGGAAACAAT
TTTAAAAACCCCGTAAGGAAAAGCAAATCAAGGATAACGATCCCTATGGCCGTTTGTAAGCCAC
CACTAAGGACATCCGTTTATTTGGAGGCAGAAACCAAGTAATGTAGGATATGGGTTTTGTTGAG
TTCGATGAGATGATGAGAAGAGAATGCACCAAAACCAAAACCAAACCAAAAGAAAGGAAACCCT
GTTCATTATAGGACTGGACAGTGGTGGGGGCGTGGCTCAGTGGTAGAGCTGGCATACACAGACC
AACATGCTGGGTTCCACCCTCAGCATGGCAAATATGAGCAAAGCCAGCATAAAACATGTCTGTA
TGGTGAAGTTAGATTTATGTTATATAAAATGAATTTACGGGCACGCATATTCTAGAAGGGTCAT
ATATTAGTGTAATACAGGTCATGGCAAAACAAAAACAAAAAAAATGTTACTGTCTTGTGTAAGG
ATGCATAGGCATCTGATTTGGGGGACCTTGTACCTTGTACCCCTGGCTTTTGTTGTACCCAAAC
CCTTGGCACATGCTGTGTTGTGCTTCCTTTTGTAAATGATTTTCAATGGAATTTTGCACATAAT
ACATTGTAATACTGTACAATAATCCTGTGTAAAACAATTTTTTTCAATATT

hide sequence

RefSeq Acc Id:

XM_006235142 ⟹ XP_006235204

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	153,540,147 - 153,756,897 (+)	NCBI
mRatBN7.2	3	133,086,858 - 133,303,590 (+)	NCBI
Rnor_6.0	3	139,871,330 - 140,087,679 (+)	NCBI
Rnor_5.0	3	146,294,631 - 146,510,343 (+)	NCBI

Sequence:

show sequence

CCTGGGCGGAGAATCCTAGCCCAACTCGGTCACTGACCCGCCGGTCGCCCCCGCCTCCCGGATC
TGCACCAAGGGCGCAAGATGGAGACCTGAGACAGAAACTCCTGAACTTCCACTGGAAAAGCTCA
AATGTGTGAGCCTTCAGAACTCTGCAGAAGACAAGCCCAAGCTGAAGAGGAGAGAGAGATGCTG
GTCTGACAGTACAAGGAATTAAACCTAGGGCCTACCACCGAACTACAGACCCTGCCTGTTTTTC
AACTTTGTATTTGGAGACGGGGGGCATAATGAAGTTGCCTGGGCTATCCTTCAACTAAGTCTGC
AGCCCCCTTCAACCTCACTGACCTCTGTGAGGAACTGAAGTCCGACTCATTGACCTGAAGCAAC
CTCCCTCAGACATGGAGTGTCACCATGCTCAGAAACTCTGTGACAGGACCTGAGCCTGCTACCT
CTCTCTATCCTGGGCTCCACAGTAGCTGCACCTACACTGTCTAACTTCCCTTTTAAAGGAGTCC
CCGGCATGCAGTAGAGCCTCGCTGGGGGAAATGTCAGCTTGGACCATGGGCGCCCGAGGTCTGG
ACAAGCGAGGAAGTTTCTTTAAGCTCATTGACACGATCGCCTCGGAGATCGGAGAACTGAAACG
GGAGATGGTGCAGACAGATGTCAGCCTGGAAAATGGCCTGGAACCTTCTGAAACCTACAGCATG
GTGAGACACAAGGATGGTGGCTATCCTGAAGACAAGGACGGGAAGACATGTCCCCGAGACTCTG
GCTATGACAGCCTCTCCAACAGGCTCAGCATTCTGGACAGGCTCCTGCATACCCATCCCATATG
GCTGCAGCTCAGTCTGAGTGAGGAGGAGGCAGCAGAGGTCCTGCAGGCCCAGCCTCCAGGGATC
TTTTTGGTTCGTAAATCCTCCAAAATGCAGAAGAAAGTCCTCTCCCTTCGCCTGCCCTGTGAAT
TTGGAGCACCTCTCAAAGAGTTTACTATAAAGGAAAGCACGTACACCTTTTCCCTGGAAGGCTC
GGGAATCAGCTTTGCAGATTTATTCCGGCTCATTGCTTTCTACTGCATCAGCAGGGATGTTCTG
CCATTCACCTTGAAGCTGCCTTATGCCATTTCAACAGCCAAGACGGAGTCTCAACTTGAAGAAC
TAGCCCAGCTGGGACTAAATTTTTGGAGCTCCTCGGCAGACAACAAACCCCCAAACTCCCCACC
TCCCCATAGGCCTCTTTCCTCAGCCGGCATCTGCCCTGCCTCCTTGCGTCAGCTCTGCCTTATA
AATGGAGTGCATTCTATAAAAACCAGGACGCCTTCAGAGTTGGAGTGCAGCCAGACCAACGGAG
CCTTGTGTTTTATTAATCCTCTTTTCTTGAAAGTGCACAGCCAGGACCTCAGCACAGGCCCAAA
GCGGCCGAGCACAAGGACTCCCAACGCGAATGGCACCGAGAGACCTCGGTCCCCGCCACCCAGG
CCCCCGCCACCCGCTATTAATAGTCTGCACACAAGCCCTGGGCTATCCAGGACTGAACCCCAGA
CGAGCATGCCAGAAACAGTCCACCATAGCAAACATGGGAACGTAGCTCTGCTTGGAACAAAACC
AACTCCCATCCCTCCACCCCGGCTGAAGAAGCAGGCTTCTTTTTTGGAAGCGGAAAGCAGCGCC
AAGACCTTGACCGCCTGCCGGCCCGGCCGGAGCCCGCCGGAGCCTGAGCTGGAGCTGGAGGTGG
AGATGGGCACAGCTGGGCACGCAGGTGGAGCCCCGCCTAGGGACGCCCCCGGGGATTGCACAAG
GGCGCCGCCGCCCGACTCTGAATCACAGCCACCACCGTGCCATGGAGCCAGGCAGAGGCTGAGC
GACATGAGCCTTTCCACTTCCTCCTCGGACTCGCTGGAGTTCGACCGGAGCATGCCCCTGTATG
GGTACGAGGCCGACACCACCAGCAGCCTGGAGGACTACGAAGGGGAGAGTGACCAGGAGACGAT
GGCACCTCCCATCAAGTCCAAAAAGAAGAGGAACAGTTCTTTTGTGCTGCCCAAACTGGTCAAG
TCCCAGTTGCGAAAGATGAGCGGGGTGTTCAGCTCCTTCATGACCCCTGAGAAGCGCATGGTCC
GCAGGATCGCCGAGCTGTCCCGGGACAAATGCACCTATTTCGGGTGTCTGGTGCAGGACTACGT
GAGCTTCCTGAAGGAGAACAAGGAATGCCATGTGTCCAGCACCGATATGCTGCAGACTATCCGG
CAGTTTATGACCCAGGTCAAGAACTATTTGTCTCAGAGCTCTGAACTGGACCCCCCTATCGAGT
CACTGATCCCAGAAGACCAAATTGATGTGGTGTTGGAGAAGGCCATGCACAAATGCATCTTGAA
GCCCCTCAAGGGCCACGTGGAGGCCATGCTGAAGGACTTCCACACGGCTGATGGCTCGTGGAAA
CAACTCAAGGAAAACCTACAGCTTGTGCGGCAGAGAAACCCGCAGGAGCTGGGGGTCTTTGCTC
CAACCCCTGACTTGATGGAGCTGGAGAAGATCAAGCTGAAATTCATGACCATGCAGAAGATGTA
TTCGCCAGAAAAGAAAGTCATGCTTTTGCTACGGGTCTGTAAGCTCATCTACACTGTCATGGAG
AACAACTCAGGGAGGATGTACGGGGCGGACGACTTCTTGCCGGTCCTGACCTATGTCATAGCTC
AGTGTGATATGCTTGAATTGGACACTGAAATCGAGTACATGATGGAGCTCCTAGACCCATCACT
GCTGCATGGAGAAGGAGGCTATTACTTGACCAGTGCCTATGGGGCTCTATCTCTGATAAAGAAC
TTCCAAGAAGAACAGGCTGCAAGACTGCTCAGCTCAGAAGCCAGGGACACTCTGAGGCAGTGGC
ACAAGCGGAGAACCACCAACCGGACTATCCCCTCCGTGGATGACTTTCAGAATTACCTCCGAGT
TGCCTTCCAAGAGGTCAACAGTGGATGCACTGGGAAGACTCTCCTTGTGAGACCGTACATCACC
ACAGAGGATGTGTGTCAGCTCTGTGCTGAGAAATTTAAGGTGGAGGACCCTGAAGAGTACAGTC
TGTTTCTCTTTGTTGATGAGACATGGCAGCAATTGGCAGAGGACACTTATCCTCAGAAGATCAA
GGCTGAGCTGCACAGCCGGCCTCAGCCCCACATCTTCCACTTTGTGTACAAGCGAATCAAGAGT
GATCCTTATGGTGTGATTTTCCAGAATGGAGATGATCTCACTCCCTCATAGGGGACACATGGGA
CTTCCTATTGATATATCCAAAAGGGAGCTGAGAGTCTAGCTTTCTGGCTGCCGCCTGTTTGAGC
TTAGAAGACAGCCACCTCCTCAAGGATCCCTCAGTTCAGTGACTAAGCCATCCGTAGGCTGACT
TGGCTAAGGGCATCCTTTAGATACATTGCCCAGATGAGGTAGCTGTGATTTGGAAAATAGTAAG
ACTCTCCTCCAGAAATGGTGAATTGCATTTAATGGTTCAGATGTCCTGAGTTCACTGGCTAGTT
AACTAGTTAACCTTAGCCAGCTTCGAGGTTGGCTTACACATGTGTATGTGTGCTGAGGAAACAC
TTAAGGTACAAATTCTTCTCTTGGATTCGATATTAAGTGTTGACAAGACTGTCCGATGCAGTGC
GTCCGATACCTCTCAGCTCTGTGGATGGCTCCCTCCTTCCCTCTTTCCCTTCTTTCCTCCATCC
TTCATCCTATACTTTTTTTTTTTTACAAAGAGCCTTTGTGTTTTTATATATTTCATAGAAAAAT
TTATAGCAGTTGCAGGTAAACTGTCAGGATTGGTTTTTAAAATATTTTTGTAACTTTAAAAATA
TTCTATAAGTATGCATGTGATTTAACATTTAATATTTGAAGATGAATCTCTTGCTGGATTTGAG
AGTACTGCATTTTAGACGCCTCTTAGATGTCTCTCTTTTGTAACTGGATGTTTCTGCAAATTTG
TGGGGAGAGACTTCTGATTGTCTTAGAGCAATCCCTGACTGGCCACAGGCGGCCTTTGAAAAAA
TAAACCGGGTGTACTGTTACATTGTTCTCTTTTAGTGCTAGTGTACCTTTTGTTGTGTTTGTTT
TTTAAGCAATCAATGTTGAGAATTAGGAGAGAAACGAATGTAGAGAGAGGTAGAGAGAGAAACA
CAGACTCTAAGGAGGGGCTGAGGAACGTAGTCTGCAGGTTCAGGCTCTTTGGAGGACATAGAGA
AAAGGAGTCAGTACTGTAAGATATGTGCTACAGTGAGTTTTGACAAAGACCTGTTCCATATGCT
ATGTGCTCTGGGAAACAATTTTAAAAACCCCGTAAGGAAAAGCAAATCAAGGATAACGATCCCT
ATGGCCGTTTGTAAGCCACCACTAAGGACATCCGTTTATTTGGAGGCAGAAACCAAGTAATGTA
GGATATGGGTTTTGTTGAGTTCGATGAGATGATGAGAAGAGAATGCACCAAAACCAAAACCAAA
CCAAAAGAAAGGAAACCCTGTTCATTATAGGACTGGACAGTGGTGGGGGCGTGGCTCAGTGGTA
GAGCTGGCATACACAGACCAACATGCTGGGTTCCACCCTCAGCATGGCAAATATGAGCAAAGCC
AGCATAAAACATGTCTGTATGGTGAAGTTAGATTTATGTTATATAAAATGAATTTACGGGCACG
CATATTCTAGAAGGGTCATATATTAGTGTAATACAGGTCATGGCAAAACAAAAACAAAAAAAAT
GTTACTGTCTTGTGTAAGGATGCATAGGCATCTGATTTGGGGGACCTTGTACCTTGTACCCCTG
GCTTTTGTTGTACCCAAACCCTTGGCACATGCTGTGTTGTGCTTCCTTTTGTAAATGATTTTCA
ATGGAATTTTGCACATAATACATTGTAATACTGTACAATAATCCTGTGTAAAACAATTTTTTTC
AATATTC

hide sequence

RefSeq Acc Id:

XM_006235146 ⟹ XP_006235208

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	153,647,927 - 153,756,897 (+)	NCBI
mRatBN7.2	3	133,194,626 - 133,303,591 (+)	NCBI
Rnor_6.0	3	139,978,530 - 140,085,995 (+)	NCBI
Rnor_5.0	3	146,294,631 - 146,510,343 (+)	NCBI

Sequence:

show sequence

GTGTTCATGTCTTGGAGAAGCCTTGCAAATAAGGAAAGGACATCACCTTCATCCTTTAAAGAAA
GACAATCTGCAGGCCCCACAGAATCTAAACTGGGCGTTAAATCAGGACTGAGTTACACGTGTAT
GTGTGTATCAGCAGCTAATTCAATCTCCAGCAAACTTCAGGAATTCAGACAACTCCATTGCCAA
AAGCAGAGTTCCTTGTGAGCTCATCAGCAAAGGATTGTATATGGAAAACCCTGGAACAGAACAA
AGAAGCTGTTCTGGATGAGGAATGAAGTCTTGGCTCTCTCTTAGCATTTCCTGAATTGTCAGGC
TATGTGGCCTCTCCTGCCAGGAAAACGTCCAGAAGTGAAAAGGATGACCCGCTTTAGGTTTATT
TACAGTGTACTCTTCGTTAGAGCGCCTGTGCTTCTGGGTATAAACGGTTAATCATCTGCTGCCC
AAGGTTCCCATCGCACTCCAGTTCTGAACACAGTGCTGTGTTTTCTCTCTGGAGGGATGCCAGT
CTCTGGACGTTGCAAATAAGGATGGACTTCAAAGGCCTTGGAGCGAGGCTTCCACTCAGATGCT
GAGCCGGGAACTTGAACCTCTGGAATAAGCAGGTTGCCATGAAGCCTGCCATCTCTCCAGGAGG
GTTTTGGGACACTGGCTTTCATCCCAGCAGGATCACACATGGAACAGAATACCGGAGAGAAAGT
GACCAAGACATGGTGCAGCCCTTCAACTAGAGGAGGTTTTGGACGGAAGGCTGGGAGTCCCCGG
CATGCAGTAGAGCCTCGCTGGGGGAAATGTCAGCTTGGACCATGGGCGCCCGAGGTCTGGACAA
GCGAGGAAGTTTCTTTAAGCTCATTGACACGATCGCCTCGGAGATCGGAGAACTGAAACGGGAG
ATGGTGCAGACAGATGTCAGCCTGGAAAATGGCCTGGAACCTTCTGAAACCTACAGCATGGTGA
GACACAAGGATGGTGGCTATCCTGAAGACAAGGACGGGAAGACATGTCCCCGAGACTCTGGCTA
TGACAGCCTCTCCAACAGGCTCAGCATTCTGGACAGGCTCCTGCATACCCATCCCATATGGCTG
CAGCTCAGTCTGAGTGAGGAGGAGGCAGCAGAGGTCCTGCAGGCCCAGCCTCCAGGGATCTTTT
TGGTTCGTAAATCCTCCAAAATGCAGAAGAAAGTCCTCTCCCTTCGCCTGCCCTGTGAATTTGG
AGCACCTCTCAAAGAGTTTACTATAAAGGAAAGCACGTACACCTTTTCCCTGGAAGGCTCGGGA
ATCAGCTTTGCAGATTTATTCCGGCTCATTGCTTTCTACTGCATCAGCAGGGATGTTCTGCCAT
TCACCTTGAAGCTGCCTTATGCCATTTCAACAGCCAAGACGGAGTCTCAACTTGAAGAACTAGC
CCAGCTGGGACTAAATTTTTGGAGCTCCTCGGCAGACAACAAACCCCCAAACTCCCCACCTCCC
CATAGGCCTCTTTCCTCAGCCGGCATCTGCCCTGCCTCCTTGCGTCAGCTCTGCCTTATAAATG
GAGTGCATTCTATAAAAACCAGGACGCCTTCAGAGTTGGAGTGCAGCCAGACCAACGGAGCCTT
GTGTTTTATTAATCCTCTTTTCTTGAAAGTGCACAGCCAGGACCTCAGCACAGGCCCAAAGCGG
CCGAGCACAAGGACTCCCAACGCGAATGGCACCGAGAGACCTCGGTCCCCGCCACCCAGGCCCC
CGCCACCCGCTATTAATAGTCTGCACACAAGCCCTGGGCTATCCAGGACTGAACCCCAGACGAG
CATGCCAGAAACAGTCCACCATAGCAAACATGGGAACGTAGCTCTGCTTGGAACAAAACCAACT
CCCATCCCTCCACCCCGGCTGAAGAAGCAGGCTTCTTTTTTGGAAGCGGAAAGCAGCGCCAAGA
CCTTGACCGCCTGCCGGCCCGGCCGGAGCCCGCCGGAGCCTGAGCTGGAGCTGGAGGTGGAGAT
GGGCACAGCTGGGCACGCAGGTGGAGCCCCGCCTAGGGACGCCCCCGGGGATTGCACAAGGGCG
CCGCCGCCCGACTCTGAATCACAGCCACCACCGTGCCATGGAGCCAGGCAGAGGCTGAGCGACA
TGAGCCTTTCCACTTCCTCCTCGGACTCGCTGGAGTTCGACCGGAGCATGCCCCTGTATGGGTA
CGAGGCCGACACCACCAGCAGCCTGGAGGACTACGAAGGGGAGAGTGACCAGGAGACGATGGCA
CCTCCCATCAAGTCCAAAAAGAAGAGGAACAGTTCTTTTGTGCTGCCCAAACTGGTCAAGTCCC
AGTTGCGAAAGATGAGCGGGGTGTTCAGCTCCTTCATGACCCCTGAGAAGCGCATGGTCCGCAG
GATCGCCGAGCTGTCCCGGGACAAATGCACCTATTTCGGGTGTCTGGTGCAGGACTACGTGAGC
TTCCTGAAGGAGAACAAGGAATGCCATGTGTCCAGCACCGATATGCTGCAGACTATCCGGCAGT
TTATGACCCAGGTCAAGAACTATTTGTCTCAGAGCTCTGAACTGGACCCCCCTATCGAGTCACT
GATCCCAGAAGACCAAATTGATGTGGTGTTGGAGAAGGCCATGCACAAATGCATCTTGAAGCCC
CTCAAGGGCCACGTGGAGGCCATGCTGAAGGACTTCCACACGGCTGATGGCTCGTGGAAACAAC
TCAAGGAAAACCTACAGCTTGTGCGGCAGAGAAACCCGCAGGAGCTGGGGGTCTTTGCTCCAAC
CCCTGACTTGATGGAGCTGGAGAAGATCAAGCTGAAATTCATGACCATGCAGAAGATGTATTCG
CCAGAAAAGAAAGTCATGCTTTTGCTACGGGTCTGTAAGCTCATCTACACTGTCATGGAGAACA
ACTCAGGGAGGATGTACGGGGCGGACGACTTCTTGCCGGTCCTGACCTATGTCATAGCTCAGTG
TGATATGCTTGAATTGGACACTGAAATCGAGTACATGATGGAGCTCCTAGACCCATCACTGCTG
CATGGAGAAGGAGGCTATTACTTGACCAGTGCCTATGGGGCTCTATCTCTGATAAAGAACTTCC
AAGAAGAACAGGCTGCAAGACTGCTCAGCTCAGAAGCCAGGGACACTCTGAGGCAGTGGCACAA
GCGGAGAACCACCAACCGGACTATCCCCTCCGTGGATGACTTTCAGAATTACCTCCGAGTTGCC
TTCCAAGAGGTCAACAGTGGATGCACTGGGAAGACTCTCCTTGTGAGACCGTACATCACCACAG
AGGATGTGTGTCAGCTCTGTGCTGAGAAATTTAAGGTGGAGGACCCTGAAGAGTACAGTCTGTT
TCTCTTTGTTGATGAGACATGGCAGCAATTGGCAGAGGACACTTATCCTCAGAAGATCAAGGCT
GAGCTGCACAGCCGGCCTCAGCCCCACATCTTCCACTTTGTGTACAAGCGAATCAAGAGTGATC
CTTATGGTGTGATTTTCCAGAATGGAGATGATCTCACTCCCTCATAG

hide sequence

RefSeq Acc Id:

XM_006235148 ⟹ XP_006235210

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	153,666,408 - 153,756,897 (+)	NCBI
mRatBN7.2	3	133,213,124 - 133,303,591 (+)	NCBI
Rnor_6.0	3	139,996,907 - 140,085,995 (+)	NCBI
Rnor_5.0	3	146,294,631 - 146,510,343 (+)	NCBI

Sequence:

show sequence

TCATGGGGGAGTATACTCACACACATTCCTGTGTGCTGATGATCTCACACACTCTGTGGCTGCC
CCCACCAGTGGCTTGGGCTGACTTTGGCTGGGGCCTTGGGCCCACAAAATGCTGGATATATTTC
TCACACTAGCTTCCTTCATTTTTCCACCAAACTACCATTGCCCATTGTCCCTTTTACAGGTAAG
CAAACAGAGGCATAGGCCAGTTACAGTCTTGCCCCAGGGGTCACACAAGAGCAAGAGCCAGAGA
AGACTTCATACCATAGCTATGGGTCCCAATTCATTAGGAAGCTAAAGGTTAACCTCTCTTTGGA
ACAAGAAGTCCTGCCTGGTGGCCACTGGCACTGATCCCCATGCCCAGGAAACTGCCAGTCTGAG
CAGGAATGGGTGCGGCTCCCCAAGCAGCTGGCTACACTTCCGCTGTGCCAGGGGTACATTATTA
ACAGATTTTGAGGGCAAGGAACAGAATTGGCAGAACTTTCCAGAAGAGAGAGCTCCCAACAGGA
ATGTGCAAACTCATTGACACGATCGCCTCGGAGATCGGAGAACTGAAACGGGAGATGGTGCAGA
CAGATGTCAGCCTGGAAAATGGCCTGGAACCTTCTGAAACCTACAGCATGGTGAGACACAAGGA
TGGTGGCTATCCTGAAGACAAGGACGGGAAGACATGTCCCCGAGACTCTGGCTATGACAGCCTC
TCCAACAGGCTCAGCATTCTGGACAGGCTCCTGCATACCCATCCCATATGGCTGCAGCTCAGTC
TGAGTGAGGAGGAGGCAGCAGAGGTCCTGCAGGCCCAGCCTCCAGGGATCTTTTTGGTTCGTAA
ATCCTCCAAAATGCAGAAGAAAGTCCTCTCCCTTCGCCTGCCCTGTGAATTTGGAGCACCTCTC
AAAGAGTTTACTATAAAGGAAAGCACGTACACCTTTTCCCTGGAAGGCTCGGGAATCAGCTTTG
CAGATTTATTCCGGCTCATTGCTTTCTACTGCATCAGCAGGGATGTTCTGCCATTCACCTTGAA
GCTGCCTTATGCCATTTCAACAGCCAAGACGGAGTCTCAACTTGAAGAACTAGCCCAGCTGGGA
CTAAATTTTTGGAGCTCCTCGGCAGACAACAAACCCCCAAACTCCCCACCTCCCCATAGGCCTC
TTTCCTCAGCCGGCATCTGCCCTGCCTCCTTGCGTCAGCTCTGCCTTATAAATGGAGTGCATTC
TATAAAAACCAGGACGCCTTCAGAGTTGGAGTGCAGCCAGACCAACGGAGCCTTGTGTTTTATT
AATCCTCTTTTCTTGAAAGTGCACAGCCAGGACCTCAGCACAGGCCCAAAGCGGCCGAGCACAA
GGACTCCCAACGCGAATGGCACCGAGAGACCTCGGTCCCCGCCACCCAGGCCCCCGCCACCCGC
TATTAATAGTCTGCACACAAGCCCTGGGCTATCCAGGACTGAACCCCAGACGAGCATGCCAGAA
ACAGTCCACCATAGCAAACATGGGAACGTAGCTCTGCTTGGAACAAAACCAACTCCCATCCCTC
CACCCCGGCTGAAGAAGCAGGCTTCTTTTTTGGAAGCGGAAAGCAGCGCCAAGACCTTGACCGC
CTGCCGGCCCGGCCGGAGCCCGCCGGAGCCTGAGCTGGAGCTGGAGGTGGAGATGGGCACAGCT
GGGCACGCAGGTGGAGCCCCGCCTAGGGACGCCCCCGGGGATTGCACAAGGGCGCCGCCGCCCG
ACTCTGAATCACAGCCACCACCGTGCCATGGAGCCAGGCAGAGGCTGAGCGACATGAGCCTTTC
CACTTCCTCCTCGGACTCGCTGGAGTTCGACCGGAGCATGCCCCTGTATGGGTACGAGGCCGAC
ACCACCAGCAGCCTGGAGGACTACGAAGGGGAGAGTGACCAGGAGACGATGGCACCTCCCATCA
AGTCCAAAAAGAAGAGGAACAGTTCTTTTGTGCTGCCCAAACTGGTCAAGTCCCAGTTGCGAAA
GATGAGCGGGGTGTTCAGCTCCTTCATGACCCCTGAGAAGCGCATGGTCCGCAGGATCGCCGAG
CTGTCCCGGGACAAATGCACCTATTTCGGGTGTCTGGTGCAGGACTACGTGAGCTTCCTGAAGG
AGAACAAGGAATGCCATGTGTCCAGCACCGATATGCTGCAGACTATCCGGCAGTTTATGACCCA
GGTCAAGAACTATTTGTCTCAGAGCTCTGAACTGGACCCCCCTATCGAGTCACTGATCCCAGAA
GACCAAATTGATGTGGTGTTGGAGAAGGCCATGCACAAATGCATCTTGAAGCCCCTCAAGGGCC
ACGTGGAGGCCATGCTGAAGGACTTCCACACGGCTGATGGCTCGTGGAAACAACTCAAGGAAAA
CCTACAGCTTGTGCGGCAGAGAAACCCGCAGGAGCTGGGGGTCTTTGCTCCAACCCCTGACTTG
ATGGAGCTGGAGAAGATCAAGCTGAAATTCATGACCATGCAGAAGATGTATTCGCCAGAAAAGA
AAGTCATGCTTTTGCTACGGGTCTGTAAGCTCATCTACACTGTCATGGAGAACAACTCAGGGAG
GATGTACGGGGCGGACGACTTCTTGCCGGTCCTGACCTATGTCATAGCTCAGTGTGATATGCTT
GAATTGGACACTGAAATCGAGTACATGATGGAGCTCCTAGACCCATCACTGCTGCATGGAGAAG
GAGGCTATTACTTGACCAGTGCCTATGGGGCTCTATCTCTGATAAAGAACTTCCAAGAAGAACA
GGCTGCAAGACTGCTCAGCTCAGAAGCCAGGGACACTCTGAGGCAGTGGCACAAGCGGAGAACC
ACCAACCGGACTATCCCCTCCGTGGATGACTTTCAGAATTACCTCCGAGTTGCCTTCCAAGAGG
TCAACAGTGGATGCACTGGGAAGACTCTCCTTGTGAGACCGTACATCACCACAGAGGATGTGTG
TCAGCTCTGTGCTGAGAAATTTAAGGTGGAGGACCCTGAAGAGTACAGTCTGTTTCTCTTTGTT
GATGAGACATGGCAGCAATTGGCAGAGGACACTTATCCTCAGAAGATCAAGGCTGAGCTGCACA
GCCGGCCTCAGCCCCACATCTTCCACTTTGTGTACAAGCGAATCAAGAGTGATCCTTATGGTGT
GATTTTCCAGAATGGAGATGATCTCACTCCCTCATAG

hide sequence

RefSeq Acc Id:

XM_006235150 ⟹ XP_006235212

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	153,692,736 - 153,756,897 (+)	NCBI
mRatBN7.2	3	133,239,437 - 133,303,591 (+)	NCBI
Rnor_6.0	3	140,023,324 - 140,085,995 (+)	NCBI
Rnor_5.0	3	146,294,631 - 146,510,343 (+)	NCBI

Sequence:

show sequence

GCCTCTACCTCACAGAGATCCTTGAAATATTTCTTTTGACAAAAATGAGTTTGGAGGCCTGGTT
TGATCAGGATTTATTTATTCTTCTATTTTCATGTTGAGCAACCCAAACTGGGTGTCAAAACCTT
TTCCTTATTACAATACTTAAAGCCCTAGGTCTTTCTCAATATCAAAACCTAAGTTCTTCCTCTT
TTTAACGGGGAGCTGCTCCTCCCCCTTTATTTTTTCCTCTTGTTAGAGGAAACTCGCAGAGCCA
AGACTTAAAACTGGGGGTGGAGTTGGGGGGGGTCATTTGTTAAGGGCAGGAGCTCCCTGGCTTT
AGGAACATGACCCGCCTCCTCACTTCCTGACGTCATGCTATTTTTGTCTCTGTATAGCTCATTG
ACACGATCGCCTCGGAGATCGGAGAACTGAAACGGGAGATGGTGCAGACAGATGTCAGCCTGGA
AAATGGCCTGGAACCTTCTGAAACCTACAGAACTGGGAAATTGTCAGTGCCATGTCACAGTGAT
GGAAAGAGTAACACAGCGGACCTTCAATGCATGAAGTAGAATTCAGTATAGCCCTCGCAGTCTC
CAGAAGGTTTAAAGGGGAGCAACTAAAGAGGATGGACCCATTTTGCATTCTCAGCATGGTGAGA
CACAAGGATGGTGGCTATCCTGAAGACAAGGACGGGAAGACATGTCCCCGAGACTCTGGCTATG
ACAGCCTCTCCAACAGGCTCAGCATTCTGGACAGGCTCCTGCATACCCATCCCATATGGCTGCA
GCTCAGTCTGAGTGAGGAGGAGGCAGCAGAGGTCCTGCAGGCCCAGCCTCCAGGGATCTTTTTG
GTTCGTAAATCCTCCAAAATGCAGAAGAAAGTCCTCTCCCTTCGCCTGCCCTGTGAATTTGGAG
CACCTCTCAAAGAGTTTACTATAAAGGAAAGCACGTACACCTTTTCCCTGGAAGGCTCGGGAAT
CAGCTTTGCAGATTTATTCCGGCTCATTGCTTTCTACTGCATCAGCAGGGATGTTCTGCCATTC
ACCTTGAAGCTGCCTTATGCCATTTCAACAGCCAAGACGGAGTCTCAACTTGAAGAACTAGCCC
AGCTGGGACTAAATTTTTGGAGCTCCTCGGCAGACAACAAACCCCCAAACTCCCCACCTCCCCA
TAGGCCTCTTTCCTCAGCCGGCATCTGCCCTGCCTCCTTGCGTCAGCTCTGCCTTATAAATGGA
GTGCATTCTATAAAAACCAGGACGCCTTCAGAGTTGGAGTGCAGCCAGACCAACGGAGCCTTGT
GTTTTATTAATCCTCTTTTCTTGAAAGTGCACAGCCAGGACCTCAGCACAGGCCCAAAGCGGCC
GAGCACAAGGACTCCCAACGCGAATGGCACCGAGAGACCTCGGTCCCCGCCACCCAGGCCCCCG
CCACCCGCTATTAATAGTCTGCACACAAGCCCTGGGCTATCCAGGACTGAACCCCAGACGAGCA
TGCCAGAAACAGTCCACCATAGCAAACATGGGAACGTAGCTCTGCTTGGAACAAAACCAACTCC
CATCCCTCCACCCCGGCTGAAGAAGCAGGCTTCTTTTTTGGAAGCGGAAAGCAGCGCCAAGACC
TTGACCGCCTGCCGGCCCGGCCGGAGCCCGCCGGAGCCTGAGCTGGAGCTGGAGGTGGAGATGG
GCACAGCTGGGCACGCAGGTGGAGCCCCGCCTAGGGACGCCCCCGGGGATTGCACAAGGGCGCC
GCCGCCCGACTCTGAATCACAGCCACCACCGTGCCATGGAGCCAGGCAGAGGCTGAGCGACATG
AGCCTTTCCACTTCCTCCTCGGACTCGCTGGAGTTCGACCGGAGCATGCCCCTGTATGGGTACG
AGGCCGACACCACCAGCAGCCTGGAGGACTACGAAGGGGAGAGTGACCAGGAGACGATGGCACC
TCCCATCAAGTCCAAAAAGAAGAGGAACAGTTCTTTTGTGCTGCCCAAACTGGTCAAGTCCCAG
TTGCGAAAGATGAGCGGGGTGTTCAGCTCCTTCATGACCCCTGAGAAGCGCATGGTCCGCAGGA
TCGCCGAGCTGTCCCGGGACAAATGCACCTATTTCGGGTGTCTGGTGCAGGACTACGTGAGCTT
CCTGAAGGAGAACAAGGAATGCCATGTGTCCAGCACCGATATGCTGCAGACTATCCGGCAGTTT
ATGACCCAGGTCAAGAACTATTTGTCTCAGAGCTCTGAACTGGACCCCCCTATCGAGTCACTGA
TCCCAGAAGACCAAATTGATGTGGTGTTGGAGAAGGCCATGCACAAATGCATCTTGAAGCCCCT
CAAGGGCCACGTGGAGGCCATGCTGAAGGACTTCCACACGGCTGATGGCTCGTGGAAACAACTC
AAGGAAAACCTACAGCTTGTGCGGCAGAGAAACCCGCAGGAGCTGGGGGTCTTTGCTCCAACCC
CTGACTTGATGGAGCTGGAGAAGATCAAGCTGAAATTCATGACCATGCAGAAGATGTATTCGCC
AGAAAAGAAAGTCATGCTTTTGCTACGGGTCTGTAAGCTCATCTACACTGTCATGGAGAACAAC
TCAGGGAGGATGTACGGGGCGGACGACTTCTTGCCGGTCCTGACCTATGTCATAGCTCAGTGTG
ATATGCTTGAATTGGACACTGAAATCGAGTACATGATGGAGCTCCTAGACCCATCACTGCTGCA
TGGAGAAGGAGGCTATTACTTGACCAGTGCCTATGGGGCTCTATCTCTGATAAAGAACTTCCAA
GAAGAACAGGCTGCAAGACTGCTCAGCTCAGAAGCCAGGGACACTCTGAGGCAGTGGCACAAGC
GGAGAACCACCAACCGGACTATCCCCTCCGTGGATGACTTTCAGAATTACCTCCGAGTTGCCTT
CCAAGAGGTCAACAGTGGATGCACTGGGAAGACTCTCCTTGTGAGACCGTACATCACCACAGAG
GATGTGTGTCAGCTCTGTGCTGAGAAATTTAAGGTGGAGGACCCTGAAGAGTACAGTCTGTTTC
TCTTTGTTGATGAGACATGGCAGCAATTGGCAGAGGACACTTATCCTCAGAAGATCAAGGCTGA
GCTGCACAGCCGGCCTCAGCCCCACATCTTCCACTTTGTGTACAAGCGAATCAAGAGTGATCCT
TATGGTGTGATTTTCCAGAATGGAGATGATCTCACTCCCTCATAG

hide sequence

RefSeq Acc Id:

XM_017591763 ⟹ XP_017447252

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	153,540,147 - 153,756,897 (+)	NCBI
mRatBN7.2	3	133,086,858 - 133,303,590 (+)	NCBI
Rnor_6.0	3	139,871,330 - 140,085,995 (+)	NCBI

Sequence:

show sequence

CCTGGGCGGAGAATCCTAGCCCAACTCGGTCACTGACCCGCCGGTCGCCCCCGCCTCCCGGATC
TGCACCAAGGGCGCAAGATGGAGACCTGAGACAGAAACTCCTGAACTTCCACTGGAAAAGCTCA
AATGTGTGAGCCTTCAGAACTCTGCAGAAGACAAGCCCAAGCTGAAGAGGAGAGAGAGATGCTG
GTCTGACAGAAGTCCGACTCATTGACCTGAAGCAACCTCCCTCAGACATGGAGTGTCACCATGC
TCAGAAACTCTGTGACAGGACCTGAGCCTGCTACCTCTCTCTATCCTGGGCTCCACAGTAGCTG
CACCTACACTGTCTAACTTCCCTTTTAAAGGAGTCCCCGGCATGCAGTAGAGCCTCGCTGGGGG
AAATGTCAGCTTGGACCATGGGCGCCCGAGGTCTGGACAAGCGAGGAAGTTTCTTTAAGCTCAT
TGACACGATCGCCTCGGAGATCGGAGAACTGAAACGGGAGATGGTGCAGACAGATGTCAGCCTG
GAAAATGGCCTGGAACCTTCTGAAACCTACAGCATGGTGAGACACAAGGATGGTGGCTATCCTG
AAGACAAGGACGGGAAGACATGTCCCCGAGACTCTGGCTATGACAGCCTCTCCAACAGGCTCAG
CATTCTGGACAGGCTCCTGCATACCCATCCCATATGGCTGCAGCTCAGTCTGAGTGAGGAGGAG
GCAGCAGAGGTCCTGCAGGCCCAGCCTCCAGGGATCTTTTTGGTTCGTAAATCCTCCAAAATGC
AGAAGAAAGTCCTCTCCCTTCGCCTGCCCTGTGAATTTGGAGCACCTCTCAAAGAGTTTACTAT
AAAGGAAAGCACGTACACCTTTTCCCTGGAAGGCTCGGGAATCAGCTTTGCAGATTTATTCCGG
CTCATTGCTTTCTACTGCATCAGCAGGGATGTTCTGCCATTCACCTTGAAGCTGCCTTATGCCA
TTTCAACAGCCAAGACGGAGTCTCAACTTGAAGAACTAGCCCAGCTGGGACTAAATTTTTGGAG
CTCCTCGGCAGACAACAAACCCCCAAACTCCCCACCTCCCCATAGGCCTCTTTCCTCAGCCGGC
ATCTGCCCTGCCTCCTTGCGTCAGCTCTGCCTTATAAATGGAGTGCATTCTATAAAAACCAGGA
CGCCTTCAGAGTTGGAGTGCAGCCAGACCAACGGAGCCTTGTGTTTTATTAATCCTCTTTTCTT
GAAAGTGCACAGCCAGGACCTCAGCACAGGCCCAAAGCGGCCGAGCACAAGGACTCCCAACGCG
AATGGCACCGAGAGACCTCGGTCCCCGCCACCCAGGCCCCCGCCACCCGCTATTAATAGTCTGC
ACACAAGCCCTGGGCTATCCAGGACTGAACCCCAGACGAGCATGCCAGAAACAGTCCACCATAG
CAAACATGGGAACGTAGCTCTGCTTGGAACAAAACCAACTCCCATCCCTCCACCCCGGCTGAAG
AAGCAGGCTTCTTTTTTGGAAGCGGAAAGCAGCGCCAAGACCTTGACCGCCTGCCGGCCCGGCC
GGAGCCCGCCGGAGCCTGAGCTGGAGCTGGAGGTGGAGATGGGCACAGCTGGGCACGCAGGTGG
AGCCCCGCCTAGGGACGCCCCCGGGGATTGCACAAGGGCGCCGCCGCCCGACTCTGAATCACAG
CCACCACCGTGCCATGGAGCCAGGCAGAGGCTGAGCGACATGAGCCTTTCCACTTCCTCCTCGG
ACTCGCTGGAGTTCGACCGGAGCATGCCCCTGTATGGGTACGAGGCCGACACCACCAGCAGCCT
GGAGGACTACGAAGGGGAGAGTGACCAGGAGACGATGGCACCTCCCATCAAGTCCAAAAAGAAG
AGGAACAGTTCTTTTGTGCTGCCCAAACTGGTCAAGTCCCAGTTGCGAAAGATGAGCGGGGTGT
TCAGCTCCTTCATGACCCCTGAGAAGCGCATGGTCCGCAGGATCGCCGAGCTGTCCCGGGACAA
ATGCACCTATTTCGGGTGTCTGGTGCAGGACTACGTGAGCTTCCTGAAGGAGAACAAGGAATGC
CATGTGTCCAGCACCGATATGCTGCAGACTATCCGGCAGTTTATGACCCAGGTCAAGAACTATT
TGTCTCAGAGCTCTGAACTGGACCCCCCTATCGAGTCACTGATCCCAGAAGACCAAATTGATGT
GGTGTTGGAGAAGGCCATGCACAAATGCATCTTGAAGCCCCTCAAGGGCCACGTGGAGGCCATG
CTGAAGGACTTCCACACGGCTGATGGCTCGTGGAAACAACTCAAGGAAAACCTACAGCTTGTGC
GGCAGAGAAACCCGCAGGAGCTGGGGGTCTTTGCTCCAACCCCTGACTTGATGGAGCTGGAGAA
GATCAAGCTGAAATTCATGACCATGCAGAAGATGTATTCGCCAGAAAAGAAAGTCATGCTTTTG
CTACGGGTCTGTAAGCTCATCTACACTGTCATGGAGAACAACTCAGGGAGGATGTACGGGGCGG
ACGACTTCTTGCCGGTCCTGACCTATGTCATAGCTCAGTGTGATATGCTTGAATTGGACACTGA
AATCGAGTACATGATGGAGCTCCTAGACCCATCACTGCTGCATGGAGAAGGAGGCTATTACTTG
ACCAGTGCCTATGGGGCTCTATCTCTGATAAAGAACTTCCAAGAAGAACAGGCTGCAAGACTGC
TCAGCTCAGAAGCCAGGGACACTCTGAGGCAGTGGCACAAGCGGAGAACCACCAACCGGACTAT
CCCCTCCGTGGATGACTTTCAGAATTACCTCCGAGTTGCCTTCCAAGAGGTCAACAGTGGATGC
ACTGGGAAGACTCTCCTTGTGAGACCGTACATCACCACAGAGGATGTGTGTCAGCTCTGTGCTG
AGAAATTTAAGGTGGAGGACCCTGAAGAGTACAGTCTGTTTCTCTTTGTTGATGAGACATGGCA
GCAATTGGCAGAGGACACTTATCCTCAGAAGATCAAGGCTGAGCTGCACAGCCGGCCTCAGCCC
CACATCTTCCACTTTGTGTACAAGCGAATCAAGAGTGATCCTTATGGTGTGATTTTCCAGAATG
GAGATGATCTCACTCCCTCATAG

hide sequence

RefSeq Acc Id:

XM_017591764 ⟹ XP_017447253

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	153,540,147 - 153,756,897 (+)	NCBI
mRatBN7.2	3	133,086,858 - 133,303,590 (+)	NCBI
Rnor_6.0	3	139,871,330 - 140,087,665 (+)	NCBI

Sequence:

show sequence

CCTGGGCGGAGAATCCTAGCCCAACTCGGTCACTGACCCGCCGGTCGCCCCCGCCTCCCGGATC
TGCACCAAGGGCGCAAGATGGAGACCTGAGACAGAAACTCCTGAACTTCCACTGGAAAAGCTCA
AATGTGTGAGCCTTCAGAACTCTGCAGAAGACAAGCCCAAGCTGAAGAGGAGAGAGAGATGCTG
GTCTGACAGGAGTCCCCGGCATGCAGTAGAGCCTCGCTGGGGGAAATGTCAGCTTGGACCATGG
GCGCCCGAGGTCTGGACAAGCGAGGAAGTTTCTTTAAGCTCATTGACACGATCGCCTCGGAGAT
CGGAGAACTGAAACGGGAGATGGTGCAGACAGATGTCAGCCTGGAAAATGGCCTGGAACCTTCT
GAAACCTACAGCATGGTGAGACACAAGGATGGTGGCTATCCTGAAGACAAGGACGGGAAGACAT
GTCCCCGAGACTCTGGCTATGACAGCCTCTCCAACAGGCTCAGCATTCTGGACAGGCTCCTGCA
TACCCATCCCATATGGCTGCAGCTCAGTCTGAGTGAGGAGGAGGCAGCAGAGGTCCTGCAGGCC
CAGCCTCCAGGGATCTTTTTGGTTCGTAAATCCTCCAAAATGCAGAAGAAAGTCCTCTCCCTTC
GCCTGCCCTGTGAATTTGGAGCACCTCTCAAAGAGTTTACTATAAAGGAAAGCACGTACACCTT
TTCCCTGGAAGGCTCGGGAATCAGCTTTGCAGATTTATTCCGGCTCATTGCTTTCTACTGCATC
AGCAGGGATGTTCTGCCATTCACCTTGAAGCTGCCTTATGCCATTTCAACAGCCAAGACGGAGT
CTCAACTTGAAGAACTAGCCCAGCTGGGACTAAATTTTTGGAGCTCCTCGGCAGACAACAAACC
CCCAAACTCCCCACCTCCCCATAGGCCTCTTTCCTCAGCCGGCATCTGCCCTGCCTCCTTGCGT
CAGCTCTGCCTTATAAATGGAGTGCATTCTATAAAAACCAGGACGCCTTCAGAGTTGGAGTGCA
GCCAGACCAACGGAGCCTTGTGTTTTATTAATCCTCTTTTCTTGAAAGTGCACAGCCAGGACCT
CAGCACAGGCCCAAAGCGGCCGAGCACAAGGACTCCCAACGCGAATGGCACCGAGAGACCTCGG
TCCCCGCCACCCAGGCCCCCGCCACCCGCTATTAATAGTCTGCACACAAGCCCTGGGCTATCCA
GGACTGAACCCCAGACGAGCATGCCAGAAACAGTCCACCATAGCAAACATGGGAACGTAGCTCT
GCTTGGAACAAAACCAACTCCCATCCCTCCACCCCGGCTGAAGAAGCAGGCTTCTTTTTTGGAA
GCGGAAAGCAGCGCCAAGACCTTGACCGCCTGCCGGCCCGGCCGGAGCCCGCCGGAGCCTGAGC
TGGAGCTGGAGGTGGAGATGGGCACAGCTGGGCACGCAGGTGGAGCCCCGCCTAGGGACGCCCC
CGGGGATTGCACAAGGGCGCCGCCGCCCGACTCTGAATCACAGCCACCACCGTGCCATGGAGCC
AGGCAGAGGCTGAGCGACATGAGCCTTTCCACTTCCTCCTCGGACTCGCTGGAGTTCGACCGGA
GCATGCCCCTGTATGGGTACGAGGCCGACACCACCAGCAGCCTGGAGGACTACGAAGGGGAGAG
TGACCAGGAGACGATGGCACCTCCCATCAAGTCCAAAAAGAAGAGGAACAGTTCTTTTGTGCTG
CCCAAACTGGTCAAGTCCCAGTTGCGAAAGATGAGCGGGGTGTTCAGCTCCTTCATGACCCCTG
AGAAGCGCATGGTCCGCAGGATCGCCGAGCTGTCCCGGGACAAATGCACCTATTTCGGGTGTCT
GGTGCAGGACTACGTGAGCTTCCTGAAGGAGAACAAGGAATGCCATGTGTCCAGCACCGATATG
CTGCAGACTATCCGGCAGTTTATGACCCAGGTCAAGAACTATTTGTCTCAGAGCTCTGAACTGG
ACCCCCCTATCGAGTCACTGATCCCAGAAGACCAAATTGATGTGGTGTTGGAGAAGGCCATGCA
CAAATGCATCTTGAAGCCCCTCAAGGGCCACGTGGAGGCCATGCTGAAGGACTTCCACACGGCT
GATGGCTCGTGGAAACAACTCAAGGAAAACCTACAGCTTGTGCGGCAGAGAAACCCGCAGGAGC
TGGGGGTCTTTGCTCCAACCCCTGACTTGATGGAGCTGGAGAAGATCAAGCTGAAATTCATGAC
CATGCAGAAGATGTATTCGCCAGAAAAGAAAGTCATGCTTTTGCTACGGGTCTGTAAGCTCATC
TACACTGTCATGGAGAACAACTCAGGGAGGATGTACGGGGCGGACGACTTCTTGCCGGTCCTGA
CCTATGTCATAGCTCAGTGTGATATGCTTGAATTGGACACTGAAATCGAGTACATGATGGAGCT
CCTAGACCCATCACTGCTGCATGGAGAAGGAGGCTATTACTTGACCAGTGCCTATGGGGCTCTA
TCTCTGATAAAGAACTTCCAAGAAGAACAGGCTGCAAGACTGCTCAGCTCAGAAGCCAGGGACA
CTCTGAGGCAGTGGCACAAGCGGAGAACCACCAACCGGACTATCCCCTCCGTGGATGACTTTCA
GAATTACCTCCGAGTTGCCTTCCAAGAGGTCAACAGTGGATGCACTGGGAAGACTCTCCTTGTG
AGACCGTACATCACCACAGAGGATGTGTGTCAGCTCTGTGCTGAGAAATTTAAGGTGGAGGACC
CTGAAGAGTACAGTCTGTTTCTCTTTGTTGATGAGACATGGCAGCAATTGGCAGAGGACACTTA
TCCTCAGAAGATCAAGGCTGAGCTGCACAGCCGGCCTCAGCCCCACATCTTCCACTTTGTGTAC
AAGCGAATCAAGAGTGATCCTTATGGTGTGATTTTCCAGAATGGAGATGATCTCACTCCCTCAT
AGGGGACACATGGGACTTCCTATTGATATATCCAAAAGGGAGCTGAGAGTCTAGCTTTCTGGCT
GCCGCCTGTTTGAGCTTAGAAGACAGCCACCTCCTCAAGGATCCCTCAGTTCAGTGACTAAGCC
ATCCGTAGGCTGACTTGGCTAAGGGCATCCTTTAGATACATTGCCCAGATGAGGTAGCTGTGAT
TTGGAAAATAGTAAGACTCTCCTCCAGAAATGGTGAATTGCATTTAATGGTTCAGATGTCCTGA
GTTCACTGGCTAGTTAACTAGTTAACCTTAGCCAGCTTCGAGGTTGGCTTACACATGTGTATGT
GTGCTGAGGAAACACTTAAGGTACAAATTCTTCTCTTGGATTCGATATTAAGTGTTGACAAGAC
TGTCCGATGCAGTGCGTCCGATACCTCTCAGCTCTGTGGATGGCTCCCTCCTTCCCTCTTTCCC
TTCTTTCCTCCATCCTTCATCCTATACTTTTTTTTTTTTACAAAGAGCCTTTGTGTTTTTATAT
ATTTCATAGAAAAATTTATAGCAGTTGCAGGTAAACTGTCAGGATTGGTTTTTAAAATATTTTT
GTAACTTTAAAAATATTCTATAAGTATGCATGTGATTTAACATTTAATATTTGAAGATGAATCT
CTTGCTGGATTTGAGAGTACTGCATTTTAGACGCCTCTTAGATGTCTCTCTTTTGTAACTGGAT
GTTTCTGCAAATTTGTGGGGAGAGACTTCTGATTGTCTTAGAGCAATCCCTGACTGGCCACAGG
CGGCCTTTGAAAAAATAAACCGGGTGTACTGTTACATTGTTCTCTTTTAGTGCTAGTGTACCTT
TTGTTGTGTTTGTTTTTTAAGCAATCAATGTTGAGAATTAGGAGAGAAACGAATGTAGAGAGAG
GTAGAGAGAGAAACACAGACTCTAAGGAGGGGCTGAGGAACGTAGTCTGCAGGTTCAGGCTCTT
TGGAGGACATAGAGAAAAGGAGTCAGTACTGTAAGATATGTGCTACAGTGAGTTTTGACAAAGA
CCTGTTCCATATGCTATGTGCTCTGGGAAACAATTTTAAAAACCCCGTAAGGAAAAGCAAATCA
AGGATAACGATCCCTATGGCCGTTTGTAAGCCACCACTAAGGACATCCGTTTATTTGGAGGCAG
AAACCAAGTAATGTAGGATATGGGTTTTGTTGAGTTCGATGAGATGATGAGAAGAGAATGCACC
AAAACCAAAACCAAACCAAAAGAAAGGAAACCCTGTTCATTATAGGACTGGACAGTGGTGGGGG
CGTGGCTCAGTGGTAGAGCTGGCATACACAGACCAACATGCTGGGTTCCACCCTCAGCATGGCA
AATATGAGCAAAGCCAGCATAAAACATGTCTGTATGGTGAAGTTAGATTTATGTTATATAAAAT
GAATTTACGGGCACGCATATTCTAGAAGGGTCATATATTAGTGTAATACAGGTCATGGCAAAAC
AAAAACAAAAAAAATGTTACTGTCTTGTGTAAGGATGCATAGGCATCTGATTTGGGGGACCTTG
TACCTTGTACCCCTGGCTTTTGTTGTACCCAAACCCTTGGCACATGCTGTGTTGTGCTTCCTTT
TGTAAATGATTTTCAATGGAATTTTGCACATAATACATTGTAATACTGTACAATAATCCTGTGT
AAAACAAT

hide sequence

RefSeq Acc Id:

XM_017591766 ⟹ XP_017447255

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	153,692,736 - 153,756,897 (+)	NCBI
mRatBN7.2	3	133,194,629 - 133,303,591 (+)	NCBI
Rnor_6.0	3	139,978,530 - 140,085,995 (+)	NCBI

Sequence:

show sequence

GTGTTCATGTCTTGGAGAAGCCTTGCAAATAAGGAAAGGACATCACCTTCATCCTTTAAAGAAA
GACAATCTGCAGGCCCCACAGAATCTAAACTGGGCGTTAAATCAGGACTGAGTTACACGTGTAT
GTGTGTATCAGCAGCTAATTCAATCTCCAGCAAACTTCAGGAATTCAGACAACTCCATTGCCAA
AAGCAGAGTTCCTTGTGAGCTCATCAGCAAAGGATTGTATATGGAAAACCCTGGAACAGAACAA
AGAAGCTGTTCTGGATGAGGAATGAAGTCTTGGCTCTCTCTTAGCATTTCCTGAATTGTCAGGC
TATGTGGCCTCTCCTGCCAGGAAAACGTCCAGAAGTGAAAAGGATGACCCGCTTTAGGTTTATT
TACAGTGTACTCTTCGTTAGAGCGCCTGTGCTTCTGGGTATAAACGGTTAATCATCTGCTGCCC
AAGGTTCCCATCGCACTCCAGTTCTGAACACAGTGCTGTGTTTTCTCTCTGGAGGGATGCCAGT
CTCTGGACGTTGCAAATAAGGATGGACTTCAAAGGCCTTGGAGCGAGGCTTCCACTCAGATGCT
GAGCCGGGAACTTGAACCTCTGGAATAAGCAGGTTGCCATGAAGCCTGCCATCTCTCCAGGAGG
GTTTTGGGACACTGGCTTTCATCCCAGCAGGATCACACATGGAACAGAATACCGGAGAGAAAGT
GACCAAGACATGGTGCAGCCCTTCAACTAGAGGAGGTTTTGGACGGAAGGCTGGGTATGTGAGA
TGCTGTTTTGCTTAGGAGTCCCCGGCATGCAGTAGAGCCTCGCTGGGGGAAATGTCAGCTTGGA
CCATGGGCGCCCGAGGTCTGGACAAGCGAGGAAGTTTCTTTAAGCTCATTGACACGATCGCCTC
GGAGATCGGAGAACTGAAACGGGAGATGGTGCAGACAGATGTCAGCCTGGAAAATGGCCTGGAA
CCTTCTGAAACCTACAGGTGATCAAAGACGAAGCTAGGTGCTGGTTTCAAGTTGGGGGACTCAG
AGAAGCTTGTGAAAGAAGAGGGATGACATCCCGTCACTCCTTCAAAGATTGGGCTTTGGGAGTG
TGGTGACACGACTGGATGAAATTCTCTGTAGGAGGTGGGAGTGGCCTAGAAGCTCCTTGCCTGC
TTGTTTATTTTAATTGCTTTGAAGGCACTTGAACTTTGTACCTTCTTGATTCCTCCTGGCACCA
GAACTGGGAAATTGTCAGTGCCATGTCACAGTGATGGAAAGAGTAACACAGCGGACCTTCAATG
CATGAAGTAGAATTCAGTATAGCCCTCGCAGTCTCCAGAAGGTTTAAAGGGGAGCAACTAAAGA
GGATGGACCCATTTTGCATTCTCAGGTTCTGATCAGAAAGTGAAAGAGCGTCTCTCCTTGAATC
TGCTGTACAGCCACAGTTTCTCAGAGATGAGCCTAATCCTGCTGATTCTAATGAAACATGGTGA
GACACAAGGATGGTGGCTATCCTGAAGACAAGGACGGGAAGACATGTCCCCGAGACTCTGGCTA
TGACAGCCTCTCCAACAGGCTCAGCATTCTGGACAGGCTCCTGCATACCCATCCCATATGGCTG
CAGCTCAGTCTGAGTGAGGAGGAGGCAGCAGAGGTCCTGCAGGCCCAGCCTCCAGGGATCTTTT
TGGTTCGTAAATCCTCCAAAATGCAGAAGAAAGTCCTCTCCCTTCGCCTGCCCTGTGAATTTGG
AGCACCTCTCAAAGAGTTTACTATAAAGGAAAGCACGTACACCTTTTCCCTGGAAGGCTCGGGA
ATCAGCTTTGCAGATTTATTCCGGCTCATTGCTTTCTACTGCATCAGCAGGGATGTTCTGCCAT
TCACCTTGAAGCTGCCTTATGCCATTTCAACAGCCAAGACGGAGTCTCAACTTGAAGAACTAGC
CCAGCTGGGACTAAATTTTTGGAGCTCCTCGGCAGACAACAAACCCCCAAACTCCCCACCTCCC
CATAGGCCTCTTTCCTCAGCCGGCATCTGCCCTGCCTCCTTGCGTCAGCTCTGCCTTATAAATG
GAGTGCATTCTATAAAAACCAGGACGCCTTCAGAGTTGGAGTGCAGCCAGACCAACGGAGCCTT
GTGTTTTATTAATCCTCTTTTCTTGAAAGTGCACAGCCAGGACCTCAGCACAGGCCCAAAGCGG
CCGAGCACAAGGACTCCCAACGCGAATGGCACCGAGAGACCTCGGTCCCCGCCACCCAGGCCCC
CGCCACCCGCTATTAATAGTCTGCACACAAGCCCTGGGCTATCCAGGACTGAACCCCAGACGAG
CATGCCAGAAACAGTCCACCATAGCAAACATGGGAACGTAGCTCTGCTTGGAACAAAACCAACT
CCCATCCCTCCACCCCGGCTGAAGAAGCAGGCTTCTTTTTTGGAAGCGGAAAGCAGCGCCAAGA
CCTTGACCGCCTGCCGGCCCGGCCGGAGCCCGCCGGAGCCTGAGCTGGAGCTGGAGGTGGAGAT
GGGCACAGCTGGGCACGCAGGTGGAGCCCCGCCTAGGGACGCCCCCGGGGATTGCACAAGGGCG
CCGCCGCCCGACTCTGAATCACAGCCACCACCGTGCCATGGAGCCAGGCAGAGGCTGAGCGACA
TGAGCCTTTCCACTTCCTCCTCGGACTCGCTGGAGTTCGACCGGAGCATGCCCCTGTATGGGTA
CGAGGCCGACACCACCAGCAGCCTGGAGGACTACGAAGGGGAGAGTGACCAGGAGACGATGGCA
CCTCCCATCAAGTCCAAAAAGAAGAGGAACAGTTCTTTTGTGCTGCCCAAACTGGTCAAGTCCC
AGTTGCGAAAGATGAGCGGGGTGTTCAGCTCCTTCATGACCCCTGAGAAGCGCATGGTCCGCAG
GATCGCCGAGCTGTCCCGGGACAAATGCACCTATTTCGGGTGTCTGGTGCAGGACTACGTGAGC
TTCCTGAAGGAGAACAAGGAATGCCATGTGTCCAGCACCGATATGCTGCAGACTATCCGGCAGT
TTATGACCCAGGTCAAGAACTATTTGTCTCAGAGCTCTGAACTGGACCCCCCTATCGAGTCACT
GATCCCAGAAGACCAAATTGATGTGGTGTTGGAGAAGGCCATGCACAAATGCATCTTGAAGCCC
CTCAAGGGCCACGTGGAGGCCATGCTGAAGGACTTCCACACGGCTGATGGCTCGTGGAAACAAC
TCAAGGAAAACCTACAGCTTGTGCGGCAGAGAAACCCGCAGGAGCTGGGGGTCTTTGCTCCAAC
CCCTGACTTGATGGAGCTGGAGAAGATCAAGCTGAAATTCATGACCATGCAGAAGATGTATTCG
CCAGAAAAGAAAGTCATGCTTTTGCTACGGGTCTGTAAGCTCATCTACACTGTCATGGAGAACA
ACTCAGGGAGGATGTACGGGGCGGACGACTTCTTGCCGGTCCTGACCTATGTCATAGCTCAGTG
TGATATGCTTGAATTGGACACTGAAATCGAGTACATGATGGAGCTCCTAGACCCATCACTGCTG
CATGGAGAAGGAGGCTATTACTTGACCAGTGCCTATGGGGCTCTATCTCTGATAAAGAACTTCC
AAGAAGAACAGGCTGCAAGACTGCTCAGCTCAGAAGCCAGGGACACTCTGAGGCAGTGGCACAA
GCGGAGAACCACCAACCGGACTATCCCCTCCGTGGATGACTTTCAGAATTACCTCCGAGTTGCC
TTCCAAGAGGTCAACAGTGGATGCACTGGGAAGACTCTCCTTGTGAGACCGTACATCACCACAG
AGGATGTGTGTCAGCTCTGTGCTGAGAAATTTAAGGTGGAGGACCCTGAAGAGTACAGTCTGTT
TCTCTTTGTTGATGAGACATGGCAGCAATTGGCAGAGGACACTTATCCTCAGAAGATCAAGGCT
GAGCTGCACAGCCGGCCTCAGCCCCACATCTTCCACTTTGTGTACAAGCGAATCAAGAGTGATC
CTTATGGTGTGATTTTCCAGAATGGAGATGATCTCACTCCCTCATAG

hide sequence

RefSeq Acc Id:

XM_039105047 ⟹ XP_038960975

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	153,700,022 - 153,756,897 (+)	NCBI
mRatBN7.2	3	133,246,723 - 133,303,591 (+)	NCBI

RefSeq Acc Id:

XM_063283805 ⟹ XP_063139875

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	153,649,207 - 153,756,897 (+)	NCBI

RefSeq Acc Id:

XM_063283806 ⟹ XP_063139876

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	153,540,147 - 153,756,897 (+)	NCBI

RefSeq Acc Id:

XM_063283807 ⟹ XP_063139877

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	153,614,668 - 153,756,897 (+)	NCBI

RefSeq Acc Id:

XM_063283808 ⟹ XP_063139878

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	153,692,736 - 153,756,897 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001101256	(Get FASTA)	NCBI Sequence Viewer
	NP_001420962	(Get FASTA)	NCBI Sequence Viewer
	NP_001420963	(Get FASTA)	NCBI Sequence Viewer
	XP_006235204	(Get FASTA)	NCBI Sequence Viewer
	XP_006235208	(Get FASTA)	NCBI Sequence Viewer
	XP_006235210	(Get FASTA)	NCBI Sequence Viewer
	XP_006235212	(Get FASTA)	NCBI Sequence Viewer
	XP_017447252	(Get FASTA)	NCBI Sequence Viewer
	XP_017447253	(Get FASTA)	NCBI Sequence Viewer
	XP_017447255	(Get FASTA)	NCBI Sequence Viewer
	XP_038960975	(Get FASTA)	NCBI Sequence Viewer
	XP_063139875	(Get FASTA)	NCBI Sequence Viewer
	XP_063139876	(Get FASTA)	NCBI Sequence Viewer
	XP_063139877	(Get FASTA)	NCBI Sequence Viewer
	XP_063139878	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDL95142	(Get FASTA)	NCBI Sequence Viewer
	EDL95143	(Get FASTA)	NCBI Sequence Viewer
	EDL95144	(Get FASTA)	NCBI Sequence Viewer
	EDL95145	(Get FASTA)	NCBI Sequence Viewer
	EDL95146	(Get FASTA)	NCBI Sequence Viewer
	EDL95147	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000059327
	ENSRNOP00000059327.1
	ENSRNOP00000072197
	ENSRNOP00000072197.1
	ENSRNOP00000083107
	ENSRNOP00000083107.1
	ENSRNOP00000106504
	ENSRNOP00000106504.1

RefSeq Acc Id:

NP_001101256 ⟸ NM_001107786

- UniProtKB:

D4A6C4 (UniProtKB/TrEMBL), A6K774 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MSAWTMGARGLDKRGSFFKLIDTIASEIGELKREMVQTDVSLENGLEPSETYSMVRHKDGGYPE
DKDGKTCPRDSGYDSLSNRLSILDRLLHTHPIWLQLSLSEEEAAEVLQAQPPGIFLVRKSSKMQ
KKVLSLRLPCEFGAPLKEFTIKESTYTFSLEGSGISFADLFRLIAFYCISRDVLPFTLKLPYAI
STAKTESQLEELAQLGLNFWSSSADNKPPNSPPPHRPLSSAGICPASLRQLCLINGVHSIKTRT
PSELECSQTNGALCFINPLFLKVHSQDLSTGPKRPSTRTPNANGTERPRSPPPRPPPPAINSLH
TSPGLSRTEPQTSMPETVHHSKHGNVALLGTKPTPIPPPRLKKQASFLEAESSAKTLTACRPGR
SPPEPELELEVEMGTAGHAGGAPPRDAPGDCTRAPPPDSESQPPPCHGARQRLSDMSLSTSSSD
SLEFDRSMPLYGYEADTTSSLEDYEGESDQETMAPPIKSKKKRNSSFVLPKLVKSQLRKMSGVF
SSFMTPEKRMVRRIAELSRDKCTYFGCLVQDYVSFLKENKECHVSSTDMLQTIRQFMTQVKNYL
SQSSELDPPIESLIPEDQIDVVLEKAMHKCILKPLKGHVEAMLKDFHTADGSWKQLKENLQLVR
QRNPQELGVFAPTPDLMELEKIKLKFMTMQKMYSPEKKVMLLLRVCKLIYTVMENNSGRMYGAD
DFLPVLTYVIAQCDMLELDTEIEYMMELLDPSLLHGEGGYYLTSAYGALSLIKNFQEEQAARLL
SSEARDTLRQWHKRRTTNRTIPSVDDFQNYLRVAFQEVNSGCTGKTLLVRPYITTEDVCQLCAE
KFKVEDPEEYSLFLFVDETWQQLAEDTYPQKIKAELHSRPQPHIFHFVYKRIKSDPYGVIFQNG
DDLTPS

hide sequence

RefSeq Acc Id:	XP_006235204 ⟸ XM_006235142
- Peptide Label:	isoform X1
- UniProtKB:	D4A6C4 (UniProtKB/TrEMBL), A6K774 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSAWTMGARGLDKRGSFFKLIDTIASEIGELKREMVQTDVSLENGLEPSETYSMVRHKDGGYPE DKDGKTCPRDSGYDSLSNRLSILDRLLHTHPIWLQLSLSEEEAAEVLQAQPPGIFLVRKSSKMQ KKVLSLRLPCEFGAPLKEFTIKESTYTFSLEGSGISFADLFRLIAFYCISRDVLPFTLKLPYAI STAKTESQLEELAQLGLNFWSSSADNKPPNSPPPHRPLSSAGICPASLRQLCLINGVHSIKTRT PSELECSQTNGALCFINPLFLKVHSQDLSTGPKRPSTRTPNANGTERPRSPPPRPPPPAINSLH TSPGLSRTEPQTSMPETVHHSKHGNVALLGTKPTPIPPPRLKKQASFLEAESSAKTLTACRPGR SPPEPELELEVEMGTAGHAGGAPPRDAPGDCTRAPPPDSESQPPPCHGARQRLSDMSLSTSSSD SLEFDRSMPLYGYEADTTSSLEDYEGESDQETMAPPIKSKKKRNSSFVLPKLVKSQLRKMSGVF SSFMTPEKRMVRRIAELSRDKCTYFGCLVQDYVSFLKENKECHVSSTDMLQTIRQFMTQVKNYL SQSSELDPPIESLIPEDQIDVVLEKAMHKCILKPLKGHVEAMLKDFHTADGSWKQLKENLQLVR QRNPQELGVFAPTPDLMELEKIKLKFMTMQKMYSPEKKVMLLLRVCKLIYTVMENNSGRMYGAD DFLPVLTYVIAQCDMLELDTEIEYMMELLDPSLLHGEGGYYLTSAYGALSLIKNFQEEQAARLL SSEARDTLRQWHKRRTTNRTIPSVDDFQNYLRVAFQEVNSGCTGKTLLVRPYITTEDVCQLCAE KFKVEDPEEYSLFLFVDETWQQLAEDTYPQKIKAELHSRPQPHIFHFVYKRIKSDPYGVIFQNG DDLTPS hide sequence

RefSeq Acc Id:	XP_006235208 ⟸ XM_006235146
- Peptide Label:	isoform X1
- UniProtKB:	D4A6C4 (UniProtKB/TrEMBL), A6K774 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSAWTMGARGLDKRGSFFKLIDTIASEIGELKREMVQTDVSLENGLEPSETYSMVRHKDGGYPE DKDGKTCPRDSGYDSLSNRLSILDRLLHTHPIWLQLSLSEEEAAEVLQAQPPGIFLVRKSSKMQ KKVLSLRLPCEFGAPLKEFTIKESTYTFSLEGSGISFADLFRLIAFYCISRDVLPFTLKLPYAI STAKTESQLEELAQLGLNFWSSSADNKPPNSPPPHRPLSSAGICPASLRQLCLINGVHSIKTRT PSELECSQTNGALCFINPLFLKVHSQDLSTGPKRPSTRTPNANGTERPRSPPPRPPPPAINSLH TSPGLSRTEPQTSMPETVHHSKHGNVALLGTKPTPIPPPRLKKQASFLEAESSAKTLTACRPGR SPPEPELELEVEMGTAGHAGGAPPRDAPGDCTRAPPPDSESQPPPCHGARQRLSDMSLSTSSSD SLEFDRSMPLYGYEADTTSSLEDYEGESDQETMAPPIKSKKKRNSSFVLPKLVKSQLRKMSGVF SSFMTPEKRMVRRIAELSRDKCTYFGCLVQDYVSFLKENKECHVSSTDMLQTIRQFMTQVKNYL SQSSELDPPIESLIPEDQIDVVLEKAMHKCILKPLKGHVEAMLKDFHTADGSWKQLKENLQLVR QRNPQELGVFAPTPDLMELEKIKLKFMTMQKMYSPEKKVMLLLRVCKLIYTVMENNSGRMYGAD DFLPVLTYVIAQCDMLELDTEIEYMMELLDPSLLHGEGGYYLTSAYGALSLIKNFQEEQAARLL SSEARDTLRQWHKRRTTNRTIPSVDDFQNYLRVAFQEVNSGCTGKTLLVRPYITTEDVCQLCAE KFKVEDPEEYSLFLFVDETWQQLAEDTYPQKIKAELHSRPQPHIFHFVYKRIKSDPYGVIFQNG DDLTPS hide sequence

RefSeq Acc Id:	XP_006235210 ⟸ XM_006235148
- Peptide Label:	isoform X2
- UniProtKB:	A0A8I5ZUT7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MCKLIDTIASEIGELKREMVQTDVSLENGLEPSETYSMVRHKDGGYPEDKDGKTCPRDSGYDSL SNRLSILDRLLHTHPIWLQLSLSEEEAAEVLQAQPPGIFLVRKSSKMQKKVLSLRLPCEFGAPL KEFTIKESTYTFSLEGSGISFADLFRLIAFYCISRDVLPFTLKLPYAISTAKTESQLEELAQLG LNFWSSSADNKPPNSPPPHRPLSSAGICPASLRQLCLINGVHSIKTRTPSELECSQTNGALCFI NPLFLKVHSQDLSTGPKRPSTRTPNANGTERPRSPPPRPPPPAINSLHTSPGLSRTEPQTSMPE TVHHSKHGNVALLGTKPTPIPPPRLKKQASFLEAESSAKTLTACRPGRSPPEPELELEVEMGTA GHAGGAPPRDAPGDCTRAPPPDSESQPPPCHGARQRLSDMSLSTSSSDSLEFDRSMPLYGYEAD TTSSLEDYEGESDQETMAPPIKSKKKRNSSFVLPKLVKSQLRKMSGVFSSFMTPEKRMVRRIAE LSRDKCTYFGCLVQDYVSFLKENKECHVSSTDMLQTIRQFMTQVKNYLSQSSELDPPIESLIPE DQIDVVLEKAMHKCILKPLKGHVEAMLKDFHTADGSWKQLKENLQLVRQRNPQELGVFAPTPDL MELEKIKLKFMTMQKMYSPEKKVMLLLRVCKLIYTVMENNSGRMYGADDFLPVLTYVIAQCDML ELDTEIEYMMELLDPSLLHGEGGYYLTSAYGALSLIKNFQEEQAARLLSSEARDTLRQWHKRRT TNRTIPSVDDFQNYLRVAFQEVNSGCTGKTLLVRPYITTEDVCQLCAEKFKVEDPEEYSLFLFV DETWQQLAEDTYPQKIKAELHSRPQPHIFHFVYKRIKSDPYGVIFQNGDDLTPS hide sequence

RefSeq Acc Id:	XP_006235212 ⟸ XM_006235150
- Peptide Label:	isoform X3
- UniProtKB:	A0A0G2K2D2 (UniProtKB/TrEMBL), A6K775 (UniProtKB/TrEMBL)
- Sequence:	show sequence MHEVEFSIALAVSRRFKGEQLKRMDPFCILSMVRHKDGGYPEDKDGKTCPRDSGYDSLSNRLSI LDRLLHTHPIWLQLSLSEEEAAEVLQAQPPGIFLVRKSSKMQKKVLSLRLPCEFGAPLKEFTIK ESTYTFSLEGSGISFADLFRLIAFYCISRDVLPFTLKLPYAISTAKTESQLEELAQLGLNFWSS SADNKPPNSPPPHRPLSSAGICPASLRQLCLINGVHSIKTRTPSELECSQTNGALCFINPLFLK VHSQDLSTGPKRPSTRTPNANGTERPRSPPPRPPPPAINSLHTSPGLSRTEPQTSMPETVHHSK HGNVALLGTKPTPIPPPRLKKQASFLEAESSAKTLTACRPGRSPPEPELELEVEMGTAGHAGGA PPRDAPGDCTRAPPPDSESQPPPCHGARQRLSDMSLSTSSSDSLEFDRSMPLYGYEADTTSSLE DYEGESDQETMAPPIKSKKKRNSSFVLPKLVKSQLRKMSGVFSSFMTPEKRMVRRIAELSRDKC TYFGCLVQDYVSFLKENKECHVSSTDMLQTIRQFMTQVKNYLSQSSELDPPIESLIPEDQIDVV LEKAMHKCILKPLKGHVEAMLKDFHTADGSWKQLKENLQLVRQRNPQELGVFAPTPDLMELEKI KLKFMTMQKMYSPEKKVMLLLRVCKLIYTVMENNSGRMYGADDFLPVLTYVIAQCDMLELDTEI EYMMELLDPSLLHGEGGYYLTSAYGALSLIKNFQEEQAARLLSSEARDTLRQWHKRRTTNRTIP SVDDFQNYLRVAFQEVNSGCTGKTLLVRPYITTEDVCQLCAEKFKVEDPEEYSLFLFVDETWQQ LAEDTYPQKIKAELHSRPQPHIFHFVYKRIKSDPYGVIFQNGDDLTPS hide sequence

RefSeq Acc Id:

XP_017447253 ⟸ XM_017591764

- Peptide Label:

isoform X1

- Sequence:

show sequence

MSAWTMGARGLDKRGSFFKLIDTIASEIGELKREMVQTDVSLENGLEPSETYSMVRHKDGGYPE
DKDGKTCPRDSGYDSLSNRLSILDRLLHTHPIWLQLSLSEEEAAEVLQAQPPGIFLVRKSSKMQ
KKVLSLRLPCEFGAPLKEFTIKESTYTFSLEGSGISFADLFRLIAFYCISRDVLPFTLKLPYAI
STAKTESQLEELAQLGLNFWSSSADNKPPNSPPPHRPLSSAGICPASLRQLCLINGVHSIKTRT
PSELECSQTNGALCFINPLFLKVHSQDLSTGPKRPSTRTPNANGTERPRSPPPRPPPPAINSLH
TSPGLSRTEPQTSMPETVHHSKHGNVALLGTKPTPIPPPRLKKQASFLEAESSAKTLTACRPGR
SPPEPELELEVEMGTAGHAGGAPPRDAPGDCTRAPPPDSESQPPPCHGARQRLSDMSLSTSSSD
SLEFDRSMPLYGYEADTTSSLEDYEGESDQETMAPPIKSKKKRNSSFVLPKLVKSQLRKMSGVF
SSFMTPEKRMVRRIAELSRDKCTYFGCLVQDYVSFLKENKECHVSSTDMLQTIRQFMTQVKNYL
SQSSELDPPIESLIPEDQIDVVLEKAMHKCILKPLKGHVEAMLKDFHTADGSWKQLKENLQLVR
QRNPQELGVFAPTPDLMELEKIKLKFMTMQKMYSPEKKVMLLLRVCKLIYTVMENNSGRMYGAD
DFLPVLTYVIAQCDMLELDTEIEYMMELLDPSLLHGEGGYYLTSAYGALSLIKNFQEEQAARLL
SSEARDTLRQWHKRRTTNRTIPSVDDFQNYLRVAFQEVNSGCTGKTLLVRPYITTEDVCQLCAE
KFKVEDPEEYSLFLFVDETWQQLAEDTYPQKIKAELHSRPQPHIFHFVYKRIKSDPYGVIFQNG
DDLTPS

hide sequence

RefSeq Acc Id:

XP_017447252 ⟸ XM_017591763

- Peptide Label:

isoform X1

- Sequence:

show sequence

MSAWTMGARGLDKRGSFFKLIDTIASEIGELKREMVQTDVSLENGLEPSETYSMVRHKDGGYPE
DKDGKTCPRDSGYDSLSNRLSILDRLLHTHPIWLQLSLSEEEAAEVLQAQPPGIFLVRKSSKMQ
KKVLSLRLPCEFGAPLKEFTIKESTYTFSLEGSGISFADLFRLIAFYCISRDVLPFTLKLPYAI
STAKTESQLEELAQLGLNFWSSSADNKPPNSPPPHRPLSSAGICPASLRQLCLINGVHSIKTRT
PSELECSQTNGALCFINPLFLKVHSQDLSTGPKRPSTRTPNANGTERPRSPPPRPPPPAINSLH
TSPGLSRTEPQTSMPETVHHSKHGNVALLGTKPTPIPPPRLKKQASFLEAESSAKTLTACRPGR
SPPEPELELEVEMGTAGHAGGAPPRDAPGDCTRAPPPDSESQPPPCHGARQRLSDMSLSTSSSD
SLEFDRSMPLYGYEADTTSSLEDYEGESDQETMAPPIKSKKKRNSSFVLPKLVKSQLRKMSGVF
SSFMTPEKRMVRRIAELSRDKCTYFGCLVQDYVSFLKENKECHVSSTDMLQTIRQFMTQVKNYL
SQSSELDPPIESLIPEDQIDVVLEKAMHKCILKPLKGHVEAMLKDFHTADGSWKQLKENLQLVR
QRNPQELGVFAPTPDLMELEKIKLKFMTMQKMYSPEKKVMLLLRVCKLIYTVMENNSGRMYGAD
DFLPVLTYVIAQCDMLELDTEIEYMMELLDPSLLHGEGGYYLTSAYGALSLIKNFQEEQAARLL
SSEARDTLRQWHKRRTTNRTIPSVDDFQNYLRVAFQEVNSGCTGKTLLVRPYITTEDVCQLCAE
KFKVEDPEEYSLFLFVDETWQQLAEDTYPQKIKAELHSRPQPHIFHFVYKRIKSDPYGVIFQNG
DDLTPS

hide sequence

RefSeq Acc Id:

XP_017447255 ⟸ XM_017591766

- Peptide Label:

isoform X4

- Sequence:

show sequence

MVRHKDGGYPEDKDGKTCPRDSGYDSLSNRLSILDRLLHTHPIWLQLSLSEEEAAEVLQAQPPG
IFLVRKSSKMQKKVLSLRLPCEFGAPLKEFTIKESTYTFSLEGSGISFADLFRLIAFYCISRDV
LPFTLKLPYAISTAKTESQLEELAQLGLNFWSSSADNKPPNSPPPHRPLSSAGICPASLRQLCL
INGVHSIKTRTPSELECSQTNGALCFINPLFLKVHSQDLSTGPKRPSTRTPNANGTERPRSPPP
RPPPPAINSLHTSPGLSRTEPQTSMPETVHHSKHGNVALLGTKPTPIPPPRLKKQASFLEAESS
AKTLTACRPGRSPPEPELELEVEMGTAGHAGGAPPRDAPGDCTRAPPPDSESQPPPCHGARQRL
SDMSLSTSSSDSLEFDRSMPLYGYEADTTSSLEDYEGESDQETMAPPIKSKKKRNSSFVLPKLV
KSQLRKMSGVFSSFMTPEKRMVRRIAELSRDKCTYFGCLVQDYVSFLKENKECHVSSTDMLQTI
RQFMTQVKNYLSQSSELDPPIESLIPEDQIDVVLEKAMHKCILKPLKGHVEAMLKDFHTADGSW
KQLKENLQLVRQRNPQELGVFAPTPDLMELEKIKLKFMTMQKMYSPEKKVMLLLRVCKLIYTVM
ENNSGRMYGADDFLPVLTYVIAQCDMLELDTEIEYMMELLDPSLLHGEGGYYLTSAYGALSLIK
NFQEEQAARLLSSEARDTLRQWHKRRTTNRTIPSVDDFQNYLRVAFQEVNSGCTGKTLLVRPYI
TTEDVCQLCAEKFKVEDPEEYSLFLFVDETWQQLAEDTYPQKIKAELHSRPQPHIFHFVYKRIK
SDPYGVIFQNGDDLTPS

hide sequence

Ensembl Acc Id:

ENSRNOP00000072197 ⟸ ENSRNOT00000086409

Ensembl Acc Id:

ENSRNOP00000059327 ⟸ ENSRNOT00000064695

RefSeq Acc Id:	XP_038960975 ⟸ XM_039105047
- Peptide Label:	isoform X4

Ensembl Acc Id:

ENSRNOP00000083107 ⟸ ENSRNOT00000096314

RefSeq Acc Id:	XP_063139876 ⟸ XM_063283806
- Peptide Label:	isoform X1
- UniProtKB:	A6K774 (UniProtKB/TrEMBL), D4A6C4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063139877 ⟸ XM_063283807
- Peptide Label:	isoform X1
- UniProtKB:	A6K774 (UniProtKB/TrEMBL), D4A6C4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063139875 ⟸ XM_063283805
- Peptide Label:	isoform X1
- UniProtKB:	A6K774 (UniProtKB/TrEMBL), D4A6C4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063139878 ⟸ XM_063283808
- Peptide Label:	isoform X3
- UniProtKB:	A0A0G2K2D2 (UniProtKB/TrEMBL), A6K775 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000106504 ⟸ ENSRNOT00000155461

Protein Domains

Ras-associating SH2 VPS9

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-D4A6C4-F1-model_v2	AlphaFold	D4A6C4	1-902	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13692489

Promoter ID:

EPDNEW_R3014

Type:

multiple initiation site

Name:

Rin2_1

Description:

Ras and Rab interactor 2

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	3	139,980,565 - 139,980,625	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1305873	AgrOrtholog
BioCyc Gene	G2FUF-47582	BioCyc
Ensembl Genes	ENSRNOG00000010131	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000064695	ENTREZGENE
	ENSRNOT00000064695.4	UniProtKB/TrEMBL
	ENSRNOT00000086409	ENTREZGENE
	ENSRNOT00000086409.3	UniProtKB/TrEMBL
	ENSRNOT00000096314	ENTREZGENE
	ENSRNOT00000096314.2	UniProtKB/TrEMBL
	ENSRNOT00000155461	ENTREZGENE
	ENSRNOT00000155461.1	UniProtKB/TrEMBL
Gene3D-CATH	1.20.1050.80	UniProtKB/TrEMBL
	3.30.505.10	UniProtKB/TrEMBL
InterPro	Ras-assoc	UniProtKB/TrEMBL
	RIN2_SH2	UniProtKB/TrEMBL
	SH2	UniProtKB/TrEMBL
	SH2_dom_sf	UniProtKB/TrEMBL
	Ubiquitin-rel_dom	UniProtKB/TrEMBL
	VPS9	UniProtKB/TrEMBL
	Vps9-like	UniProtKB/TrEMBL
	VPS9_dom_sf	UniProtKB/TrEMBL
KEGG Report	rno:311494	UniProtKB/TrEMBL
NCBI Gene	311494	ENTREZGENE
PANTHER	PTHR23101	UniProtKB/TrEMBL
	RAS AND RAB INTERACTOR 2	UniProtKB/TrEMBL
Pfam	PF00788	UniProtKB/TrEMBL
	RIN1	UniProtKB/TrEMBL
	VPS9	UniProtKB/TrEMBL
PhenoGen	Rin2	PhenoGen
PROSITE	PS50200	UniProtKB/TrEMBL
	SH2	UniProtKB/TrEMBL
	VPS9	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000010131	RatGTEx
SMART	SH2	UniProtKB/TrEMBL
	SM00314	UniProtKB/TrEMBL
	VPS9	UniProtKB/TrEMBL
Superfamily-SCOP	SSF109993	UniProtKB/TrEMBL
	SSF54236	UniProtKB/TrEMBL
	SSF55550	UniProtKB/TrEMBL
UniProt	A0A0G2K2D2	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I5ZUT7	ENTREZGENE, UniProtKB/TrEMBL
	A0ABK0LNS3_RAT	UniProtKB/TrEMBL
	A6K774	ENTREZGENE, UniProtKB/TrEMBL
	A6K775	ENTREZGENE, UniProtKB/TrEMBL
	D4A6C4	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2008-04-30	Rin2	Ras and Rab interactor 2	Rin2_predicted	Ras and Rab interactor 2 (predicted)	'predicted' is removed	2292626	APPROVED
2005-01-12	Rin2_predicted	Ras and Rab interactor 2 (predicted)			Symbol and Name status set to approved	70820	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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