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Gene: Naalad2 (N-acetylated alpha-linked acidic dipeptidase 2) Rattus norvegicus

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Symbol:

Naalad2

Name:

N-acetylated alpha-linked acidic dipeptidase 2

RGD ID:

1305872

Description:

Predicted to enable N-formylglutamate deformylase activity and carboxypeptidase activity. Predicted to be involved in carboxylic acid catabolic process. Predicted to act upstream of or within proteolysis. Predicted to be located in membrane. Orthologous to human NAALAD2 (N-acetylated alpha-linked acidic dipeptidase 2); INTERACTS WITH (R)-noradrenaline; 2,3,7,8-tetrachlorodibenzodioxine; bisphenol A.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

LOC300384; N-acetylated-alpha-linked acidic dipeptidase 2

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	NAALAD2 (N-acetylated alpha-linked acidic dipeptidase 2)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, Treefam
Mus musculus (house mouse):	Naalad2 (N-acetylated alpha-linked acidic dipeptidase 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Naalad2 (N-acetylated alpha-linked acidic dipeptidase 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	NAALAD2 (N-acetylated alpha-linked acidic dipeptidase 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	NAALAD2 (N-acetylated alpha-linked acidic dipeptidase 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Naalad2 (N-acetylated alpha-linked acidic dipeptidase 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	NAALAD2 (N-acetylated alpha-linked acidic dipeptidase 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	NAALAD2 (N-acetylated alpha-linked acidic dipeptidase 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Naalad2 (N-acetylated alpha-linked acidic dipeptidase 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Naalad2 (N-acetylated alpha-linked acidic dipeptidase 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	FOLH1 (folate hydrolase 1)	HGNC	OrthoDB
Homo sapiens (human):	FOLH1B (folate hydrolase 1B (pseudogene))	HGNC	OrthoDB
Alliance orthologs ³
Homo sapiens (human):	NAALAD2 (N-acetylated alpha-linked acidic dipeptidase 2)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Naalad2 (N-acetylated alpha-linked acidic dipeptidase 2)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	naalad2 (N-acetylated alpha-linked acidic dipeptidase 2)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	naalad2 (N-acetylated alpha-linked acidic dipeptidase 2)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Caenorhabditis elegans (roundworm):	gcp-2.1	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Saccharomyces cerevisiae (baker's yeast):	TRE1	Alliance	DIOPT (Ensembl Compara\|OrthoFinder\|PANTHER)
Saccharomyces cerevisiae (baker's yeast):	VPS70	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoInspector\|PANTHER\|SonicParanoid)
Saccharomyces cerevisiae (baker's yeast):	VPS70	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Caenorhabditis elegans (roundworm):	gcp-2.2	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	gcp-2.2	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Saccharomyces cerevisiae (baker's yeast):	TRE2	Alliance	DIOPT (Ensembl Compara\|OrthoFinder\|PANTHER)
Xenopus tropicalis (tropical clawed frog):	naalad2	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB)
Xenopus tropicalis (tropical clawed frog):	naalad2	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	8	23,682,499 - 23,756,066 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	8	23,683,395 - 23,756,060 (-)	Ensembl				GRCr8
mRatBN7.2	8	15,406,119 - 15,479,714 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	8	15,407,043 - 15,479,714 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	8	19,393,338 - 19,465,317 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	8	17,691,135 - 17,763,114 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	8	15,587,180 - 15,659,563 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	8	17,453,198 - 17,525,906 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	8	17,454,122 - 17,525,906 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	8	17,526,567 - 17,599,206 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	8	15,767,908 - 15,842,724 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	8	16,835,457 - 16,908,126 (-)	NCBI		Celera
RGSC_v3.1	8	15,767,911 - 15,836,496 (-)	NCBI
Cytogenetic Map	8	q13	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(R)-noradrenaline (EXP)

1,2-dichloroethane (ISO)

17alpha-ethynylestradiol (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

4-nonylphenol (ISO)

4-tert-Octylphenol (ISO)

acrylamide (ISO)

aflatoxin B1 (ISO)

aflatoxin M1 (ISO)

aristolochic acid A (ISO)

arsenite(3-) (ISO)

benzo[a]pyrene (ISO)

beta-naphthoflavone (ISO)

bis(2-ethylhexyl) phthalate (ISO)

bisphenol A (EXP,ISO)

CGP 52608 (ISO)

clofibrate (ISO)

copper(II) sulfate (ISO)

cyclosporin A (ISO)

D-mannitol (ISO)

dicrotophos (ISO)

dorsomorphin (ISO)

doxorubicin (ISO)

endosulfan (EXP)

entinostat (ISO)

fenvalerate (EXP)

folic acid (ISO)

fulvestrant (ISO)

mercury dichloride (ISO)

methylmercury chloride (ISO)

N,N-diethyl-m-toluamide (EXP)

nickel atom (ISO)

okadaic acid (ISO)

ozone (ISO)

p-tert-Amylphenol (ISO)

paracetamol (ISO)

perfluorooctanoic acid (ISO)

permethrin (EXP)

pioglitazone (ISO)

quercetin (ISO)

SB 431542 (ISO)

silicon dioxide (ISO)

sodium arsenite (ISO)

tamoxifen (ISO)

tetrachloromethane (ISO)

trichloroethene (EXP)

trichostatin A (ISO)

triphenyl phosphate (ISO)

urethane (ISO)

valproic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

proteolysis (IEA,ISO)

Cellular Component

membrane (IEA,ISO)

plasma membrane (IEA)

Molecular Function

carboxypeptidase activity (IBA,IEA,ISO)

catalytic activity (IEA)

dipeptidase activity (IEA)

hydrolase activity (IEA)

metal ion binding (IEA)

metallocarboxypeptidase activity (IEA)

metallopeptidase activity (IEA)

N-formylglutamate deformylase activity (IEA,ISO)

peptidase activity (IEA,ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Rat ISS GO annotations from GOA human gene data--August 2006	GOA data from the GO Consortium
3.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
4.	GOA pipeline	RGD automated data pipeline
5.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
6.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:12477932	PMID:15086519	PMID:21908619

Genomics

Comparative Map Data

Naalad2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	8	23,682,499 - 23,756,066 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	8	23,683,395 - 23,756,060 (-)	Ensembl				GRCr8
mRatBN7.2	8	15,406,119 - 15,479,714 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	8	15,407,043 - 15,479,714 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	8	19,393,338 - 19,465,317 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	8	17,691,135 - 17,763,114 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	8	15,587,180 - 15,659,563 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	8	17,453,198 - 17,525,906 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	8	17,454,122 - 17,525,906 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	8	17,526,567 - 17,599,206 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	8	15,767,908 - 15,842,724 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	8	16,835,457 - 16,908,126 (-)	NCBI		Celera
RGSC_v3.1	8	15,767,911 - 15,836,496 (-)	NCBI
Cytogenetic Map	8	q13	NCBI

NAALAD2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	11	90,131,699 - 90,192,894 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	11	90,131,515 - 90,192,894 (+)	Ensembl			hg38	GRCh38
GRCh37	11	89,867,831 - 89,926,062 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	11	89,507,530 - 89,565,424 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	11	89,507,529 - 89,565,418	NCBI
Celera	11	87,168,325 - 87,226,293 (+)	NCBI		Celera
Cytogenetic Map	11	q14.3	NCBI
HuRef	11	85,952,467 - 86,010,505 (+)	NCBI		HuRef
CHM1_1	11	89,750,836 - 89,808,679 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	11	90,051,780 - 90,112,974 (+)	NCBI		T2T-CHM13v2.0

Naalad2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	9	18,233,247 - 18,308,834 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	9	18,233,247 - 18,314,291 (-)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	9	18,321,951 - 18,397,538 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	9	18,321,951 - 18,402,995 (-)	Ensembl			mm10	GRCm38
MGSCv37	9	18,127,465 - 18,190,372 (-)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	9	18,073,423 - 18,136,330 (-)	NCBI		MGSCv36	mm8
Celera	9	15,606,315 - 15,669,553 (-)	NCBI		Celera
Cytogenetic Map	9	A2	NCBI
cM Map	9	7.02	NCBI

Naalad2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955414	3,728,596 - 3,791,706 (-)	Ensembl
ChiLan1.0	NW_004955414	3,728,596 - 3,789,265 (-)	NCBI	ChiLan1.0	ChiLan1.0

NAALAD2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	9	90,948,253 - 91,006,340 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	11	92,034,951 - 92,093,003 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	11	85,105,296 - 85,163,280 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	11	88,600,918 - 88,658,985 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	11	88,600,918 - 88,658,985 (+)	Ensembl			panPan2	panpan1.1

NAALAD2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	21	10,162,323 - 10,222,990 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	21	10,162,578 - 10,253,015 (-)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	21	10,054,329 - 10,119,513 (-)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	21	10,339,550 - 10,404,777 (-)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	21	10,343,608 - 10,435,065 (-)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	21	10,138,437 - 10,197,311 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	21	10,193,157 - 10,258,556 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	21	10,243,380 - 10,308,589 (-)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Naalad2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404947	75,689,202 - 75,735,773 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936893	673,030 - 721,588 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936893	672,380 - 716,440 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

NAALAD2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	9	23,111,059 - 23,161,832 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	9	23,106,795 - 23,161,825 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	9	25,890,099 - 25,941,320 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

NAALAD2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	1	81,259,005 - 81,319,255 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	1	81,259,083 - 81,318,092 (+)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666043	44,430,673 - 44,489,885 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Naalad2
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624845	252,042 - 298,864 (-)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624845	252,172 - 295,263 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Naalad2
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	8	14,077,948 - 14,146,428 (-)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Naalad2
331 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	62
Count of miRNA genes:	54
Interacting mature miRNAs:	59
Transcripts:	ENSRNOT00000007855
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1357398	Slep3	Serum leptin concentration QTL 3	3.43		blood leptin amount (VT:0005667)	serum leptin level (CMO:0000780)	8	17994105	50763951	Rat
2317030	Wbc5	White blood cell count QTL 5	3.21	0.005	leukocyte quantity (VT:0000217)	white blood cell count (CMO:0000027)	8	16994642	61994642	Rat
12880044	Am9	Aortic mass QTL 9		0.007	aorta mass (VT:0002845)	aorta weight to aorta length to body weight ratio (CMO:0002722)	8	10382540	55382540	Rat
2317032	Ginf2	Gastrointestinal inflammation QTL 2	3.21	0.005	liver integrity trait (VT:0010547)	liver granuloma severity score (CMO:0002157)	8	12964165	57964165	Rat
2301416	Bp315	Blood pressure QTL 315		0.008	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	8	15952279	60952279	Rat
2317036	Livw3	Liver weight QTL 3	2.43	0.01	liver mass (VT:0003402)	liver weight to body weight ratio (CMO:0000633)	8	12964165	57964165	Rat
1598824	Memor4	Memory QTL 4	2.5		exploratory behavior trait (VT:0010471)	total horizontal distance resulting from voluntary locomotion in an experimental apparatus (CMO:0001443)	8	17993862	62252873	Rat
12880023	Bw184	Body weight QTL 184		0.001	body mass (VT:0001259)	body weight (CMO:0000012)	8	10382540	55382540	Rat
9590084	Insglur5	Insulin/glucose ratio QTL 5	18.54	0.001	blood insulin amount (VT:0001560)	calculated plasma insulin level (CMO:0002170)	8	1	32882639	Rat
12880028	Cm103	Cardiac mass QTL 103		0.02	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	8	10382540	55382540	Rat
2317051	Aia18	Adjuvant induced arthritis QTL 18	2.42		joint integrity trait (VT:0010548)	left rear ankle joint diameter (CMO:0002149)	8	16994642	61994642	Rat
2317048	Ginf1	Gastrointestinal inflammation QTL 1	3.52	0.005	cecum mucosa thickness (VT:0010234)	enterocolitis severity score (CMO:0002138)	8	12964165	57964165	Rat
2302367	Slep5	Serum leptin concentration QTL 5	3.43		blood leptin amount (VT:0005667)	serum leptin level (CMO:0000780)	8	17994105	50763951	Rat
12880025	Cm102	Cardiac mass QTL 102		0.044	heart mass (VT:0007028)	heart wet weight to body weight ratio (CMO:0002408)	8	10382540	55382540	Rat

Markers in Region

RH132617

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	8	15,406,210 - 15,406,394 (+)	MAPPER	mRatBN7.2
Rnor_6.0	8	17,453,290 - 17,453,473	NCBI	Rnor6.0
Rnor_5.0	8	17,526,659 - 17,526,842	UniSTS	Rnor5.0
RGSC_v3.4	8	15,767,076 - 15,767,259	UniSTS	RGSC3.4
Celera	8	16,834,625 - 16,834,808	UniSTS
RH 3.4 Map	8	142.1	UniSTS
Cytogenetic Map	8	q12	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
12	11	67	146	77	76	45	61	45	6	292	160	9	125	67	92	31	13	13

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001106802	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001433038	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001433047	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001433048	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001433049	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006242568	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008765922	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008765923	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008765924	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017595523	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017595524	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017595525	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039080986	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039080987	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039080989	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039080990	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039080992	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039080993	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063265044	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063265045	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005487751	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	BC086439	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC168965	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473993	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000008	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000007855 ⟹ ENSRNOP00000007855

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	8	23,683,395 - 23,756,060 (-)	Ensembl
mRatBN7.2 Ensembl	8	15,407,043 - 15,479,714 (-)	Ensembl
Rnor_6.0 Ensembl	8	17,454,122 - 17,525,906 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000081679 ⟹ ENSRNOP00000072956

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	8	23,683,395 - 23,756,060 (-)	Ensembl
mRatBN7.2 Ensembl	8	15,407,408 - 15,478,647 (-)	Ensembl
Rnor_6.0 Ensembl	8	17,454,487 - 17,524,839 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000118338 ⟹ ENSRNOP00000079123

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	8	23,683,395 - 23,756,060 (-)	Ensembl
mRatBN7.2 Ensembl	8	15,407,408 - 15,469,720 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000133053 ⟹ ENSRNOP00000108654

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	8	23,714,500 - 23,754,993 (-)	Ensembl

RefSeq Acc Id:

NM_001106802 ⟹ NP_001100272

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	23,683,395 - 23,756,060 (-)	NCBI
mRatBN7.2	8	15,407,043 - 15,479,714 (-)	NCBI
Rnor_6.0	8	17,454,122 - 17,525,906 (-)	NCBI
Rnor_5.0	8	17,526,567 - 17,599,206 (-)	NCBI
RGSC_v3.4	8	15,767,908 - 15,842,724 (-)	RGD
Celera	8	16,835,457 - 16,908,126 (-)	RGD

Sequence:

show sequence

TCCTTAAGGAAGCTTCTTCGTGAAGGGAGGTGAAGCTTAAAAGTAGATCTTGTGGACTTTGAAA
AATTTCAGGAAAAGGATGCAAACAGCTGGTTTTAGATTGAAGAATTATTGCAGTTTTTTGAAGG
TTTAGATATGGGATGTGAAGGAAACTGAGGAGTAATATGAGGAACTGGTGTCAAAGATGAGATT
CACTACCAATAAAAGGCCCAAGACTCTGGAACCAGCGAATCACACTTTTTACAATGGATTTTCA
GGACTCAGGCTGTAGATGCCGTAAGATAGGGCTTCAGCGATGTTCATATTGCAGACCCCAGGCC
TGCAGTTGCAGTCAGAGGCACTCTCTGACCCAAAAAGGCATGGCCAGACCTAGGCAACTCCGGG
GCCTAGGAATGTGCATTACTGCGGTGCTGGCCTCCTTCATCATGGGCTTTACTGTGGGTTGGTT
TACTAAGCCTCTCAAAGAAACAACTACTTCATCTGCTTATCATCAAAGTATACAACAGAAACTC
TTGTCTGAAATGAAAGCTGAAAATATTAGATCATTTCTTCGTTCCTTTACAAAACTTCCCCATC
TGGCAGGAACGGAACAAAATTTACTACTTGCCAAGAAAATCCAAACACAATGGAAGAAATTCGG
ATTAGATTCAGCCAACCTGGTTCATTATGATGTTCTCTTGTCTTACCCAAATGAGACAAATGCA
AACTATGTATCCATTGTGGATGAACATGGAGCTGAGATTTTTAAAACATCATACCTTGAGCCAC
CACCAGATGGATATGAGAATGTCACAAACATCGTACCACCATATAATGCATTTTCAGCCCATGG
GATGCCAGAGGGAGAGCTTGTGTATGTCAACTATGCTCGTACTGAGGACTTCTTCAAACTAGAA
AGAGAGATGCACATCAACTGCACTGGCAAGATTGTTATTGCAAGATATGGGAAAATCTTTAGAG
GAAACAAAGTCAAAAATGCCATGCTAGCTGGAGCCATGGGAATCATTCTGTACTCTGATCCAGC
TGACTACTTTGCCCCTGGTGTACAGCCATATCCCAAAGGATGGAACCTTCCTGGAGCTGCAGCC
CAGAGAGGAAATGTCTTAAATCTGAATGGGGCAGGTGACCCACTCACTCCAGGTTATCCAGCTA
AAGAATATACCTTCAGACTTCCTGTTGAAGAAGCAGTGGGGATTCCAAACATACCTGTACATCC
AATTGGATATAATGATGCAGAGAGACTGTTACGCAACTTGGGAGGAACTGCTCCACCAGACCAA
AGCTGGAAGGGAAGTCTAAATGTTAGTTACAATATTGGGCCTGGCTTTTCAGGAAGTGAATATT
CCAGGAAAGTTCGAATGCATGTTCATAATATTAACAAAATCACAAGAATTTACAATGTAATTGG
AACTATCAGAGGGTCTACAGAGCCTGACAGGTATGTCATTCTCGGAGGTCATCGTGACTCCTGG
GTGTTTGGAGGGATTGACCCTACGACTGGGACAGCAGTTTTGCAAGAGATTGCGCGAAGTTTTG
GAAAACTGGTGAATGGAGGTTGGAAACCTAGGAGAACTATTATTTTTGCCAGCTGGGATGCAGA
AGAGTTTGGGCTGCTGGGTTCAACAGAATGGGCTGAAGAGAATGCAAAGATCCTACAGGAGAGA
AGCATTGCTTACATCAACTCAGATTCGGCTATAGAAGGTAATTACACTCTCCGAGTTGATTGCA
CTCCTCTTCTCCACCAGTTGGTGTATAAAGTGGCAAGAGAGATTTCCAGTCCTGATGATGGTTT
TGAAAGTAAATCACTTTATGAAAGCTGGCTGGAAAAAGACCCTTCACCTGAAAATAAAGAACGT
CCTAGAATCAATAAGTTGGGATCTGGGAGTGATTTTGAGGCTTACTTTCAAAGACTTGGAATTG
CTTCAGGCAGAGCTCGCTACACTAAGAACAAGAAAACAGATAAATACAGTAGCTATCCTGTATA
CCATACCATCTATGAGACGTTTGAATTAGTACAGAATTTTTATGATCCCACATTTAAAAAGCAG
CTTTCTGTGGCTCAGTTACGAGGAGCATTGGTATATGAGCTTGCGGACTGTGTAGTCATTCCTT
TCAACATTCAAGACTATGCGAAAGCCTTGAAAAACTATGCAGCAAGTATCTTCAATTTATCCAA
GAAACATGACCAGCAATTGAGAGATCATGGAGTATCATTTGATCCCTTATTTTCTGCTGTGAAA
AACTTTTCAGAAGCTGCTTCAGACTTTCACAGAAGACTTACACAAGTTGATCTTAATAATCCTA
CTGCAGTGAGAATTATGAATGACCAACAGATGCTTCTTGAAAGAGCATTCATAGATCCTCTTGG
TTTACCGGGGAGGCCGTTCTACAGGCACATCATCTTTGCTCCAAGCAGCCACAACAAATATGCT
GGAGAATCATTCCCTGGGATTTATGATGCCATGTTTGATATTGAAAATAAGGCAGACACTCACC
TGGCCTGGGCAGAAGTAAAGAAACACATTTCTATTGCAGCTTTCACAATTCAAGCAGCAGCAGG
GACCCTGACAGATGTGTTATAGGAACTTTTCTGTCAAGTAGCTTCATCACTAAACTAAACTAAA
GCTCAGTGTCTGAGAGTGAAATTGTTGGGGAGTGGGTCTTGGCCAAATGGATTCCCTGCAAAAG
GTGCTGCTGAGAATCTGAAGAAAAAGGCATCTTTTTCTTTGATGATTTACAAAGGCAGACAATC
CTAAAACTGTGATTGTCGTGACAGGTTTTATCCTCCTACCTTATTTATCTGTAAAGAGGGTACT
TTTTTAAACTCATATGCATATCCAGTGAAAGTGAAAGAGGAAGCAAGCCCAGTGCTCTCAGGCA
GATGATTGCATTTGCTGTGGTATGTACACATACATGAATGCATTCTCATATCAGGTAAGCTTGG
TTCTTTACTTCATCAAATAAGTGAAAATAAAAAGTTATTTAATTTACTC

hide sequence

RefSeq Acc Id:

XM_006242568 ⟹ XP_006242630

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	23,682,499 - 23,755,955 (-)	NCBI
mRatBN7.2	8	15,406,119 - 15,478,997 (-)	NCBI
Rnor_6.0	8	17,453,198 - 17,525,112 (-)	NCBI
Rnor_5.0	8	17,526,567 - 17,599,206 (-)	NCBI

Sequence:

show sequence

AGGAATGTCTGCTTGACAGGAACCATGAGGCAGGGGACCCCCATCTCCACTTTATATTTGTAGT
GAAAATTGGACCCAGAATCTTAGAAGTGCTCAGCTGGAATACATCTCTTCTCATGAACTGCAGA
ACTCAAGATACTAAACATTTGCTTTTTGGAAAATTCACTACCAATAAAAGGCCCAAGACTCTGG
AACCAGCGAATCACACTTTTTACAATGGATTTTCAGGACTCAGGCTGTAGATGCCGTAAGATAG
GGCTTCAGCGATGTTCATATTGCAGGTTGGTTTACTAAGCCTCTCAAAGAAACAACTACTTCAT
CTGCTTATCATCAAAGTATACAACAGAAACTCTTGTCTGAAATGAAAGCTGAAAATATTAGATC
ATTTCTTCGTTCCTTTACAAAACTTCCCCATCTGGCAGGAACGGAACAAAATTTACTACTTGCC
AAGAAAATCCAAACACAATGGAAGAAATTCGGATTAGATTCAGCCAACCTGGTTCATTATGATG
TTCTCTTGTCTTACCCAAATGAGACAAATGCAAACTATGTATCCATTGTGGATGAACATGGAGC
TGAGATTTTTAAAACATCATACCTTGAGCCACCACCAGATGGATATGAGAATGTCACAAACATC
GTACCACCATATAATGCATTTTCAGCCCATGGGATGCCAGAGGGAGAGCTTGTGTATGTCAACT
ATGCTCGTACTGAGGACTTCTTCAAACTAGAAAGAGAGATGCACATCAACTGCACTGGCAAGAT
TGTTATTGCAAGATATGGGAAAATCTTTAGAGGAAACAAAGTCAAAAATGCCATGCTAGCTGGA
GCCATGGGAATCATTCTGTACTCTGATCCAGCTGACTACTTTGCCCCTGGTGTACAGCCATATC
CCAAAGGATGGAACCTTCCTGGAGCTGCAGCCCAGAGAGGAAATGTCTTAAATCTGAATGGGGC
AGGTGACCCACTCACTCCAGGTTATCCAGCTAAAGAATATACCTTCAGACTTCCTGTTGAAGAA
GCAGTGGGGATTCCAAACATACCTGTACATCCAATTGGATATAATGATGCAGAGAGACTGTTAC
GCAACTTGGGAGGAACTGCTCCACCAGACCAAAGCTGGAAGGGAAGTCTAAATGTTAGTTACAA
TATTGGGCCTGGCTTTTCAGGAAGTGAATATTCCAGGAAAGTTCGAATGCATGTTCATAATATT
AACAAAATCACAAGAATTTACAATGTAATTGGAACTATCAGAGGGTCTACAGAGCCTGACAGGT
ATGTCATTCTCGGAGGTCATCGTGACTCCTGGGTGTTTGGAGGGATTGACCCTACGACTGGGAC
AGCAGTTTTGCAAGAGATTGCGCGAAGTTTTGGAAAACTGGTGAATGGAGGTTGGAAACCTAGG
AGAACTATTATTTTTGCCAGCTGGGATGCAGAAGAGTTTGGGCTGCTGGGTTCAACAGAATGGG
CTGAAGAGAATGCAAAGATCCTACAGGAGAGAAGCATTGCTTACATCAACTCAGATTCGGCTAT
AGAAGGTAATTACACTCTCCGAGTTGATTGCACTCCTCTTCTCCACCAGTTGGTGTATAAAGTG
GCAAGAGAGATTTCCAGTCCTGATGATGGTTTTGAAAGTAAATCACTTTATGAAAGCTGGCTGG
AAAAAGACCCTTCACCTGAAAATAAAGAACGTCCTAGAATCAATAAGTTGGGATCTGGGAGTGA
TTTTGAGGCTTACTTTCAAAGACTTGGAATTGCTTCAGGCAGAGCTCGCTACACTAAGAACAAG
AAAACAGATAAATACAGTAGCTATCCTGTATACCATACCATCTATGAGACGTTTGAATTAGTAC
AGAATTTTTATGATCCCACATTTAAAAAGCAGCTTTCTGTGGCTCAGTTACGAGGAGCATTGGT
ATATGAGCTTGCGGACTGTGTAGTCATTCCTTTCAACATTCAAGACTATGCGAAAGCCTTGAAA
AACTATGCAGCAAGTATCTTCAATTTATCCAAGAAACATGACCAGCAATTGAGAGATCATGGAG
TATCATTTGATCCCTTATTTTCTGCTGTGAAAAACTTTTCAGAAGCTGCTTCAGACTTTCACAG
AAGACTTACACAAGTTGATCTTAATAATCCTACTGCAGTGAGAATTATGAATGACCAACAGATG
CTTCTTGAAAGAGCATTCATAGATCCTCTTGGTTTACCGGGGAGGCCGTTCTACAGGCACATCA
TCTTTGCTCCAAGCAGCCACAACAAATATGCTGGAGAATCATTCCCTGGGATTTATGATGCCAT
GTTTGATATTGAAAATAAGGCAGACACTCACCTGGCCTGGGCAGAAGTAAAGAAACACATTTCT
ATTGCAGCTTTCACAATTCAAGCAGCAGCAGGGACCCTGACAGATGTGTTATAGGAACTTTTCT
GTCAAGTAGCTTCATCACTAAACTAAACTAAAGCTCAGTGTCTGAGAGTGAAATTGTTGGGGAG
TGGGTCTTGGCCAAATGGATTCCCTGCAAAAGGTGCTGCTGAGAATCTGAAGAAAAAGGCATCT
TTTTCTTTGATGATTTACAAAGGCAGACAATCCTAAAACTGTGATTGTCGTGACAGGTTTTATC
CTCCTACCTTATTTATCTGTAAAGAGGGTACTTTTTTAAACTCATATGCATATCCAGTGAAAGT
GAAAGAGGAAGCAAGCCCAGTGCTCTCAGGCAGATGATTGCATTTGCTGTGGTATGTACACATA
CATGAATGCATTCTCATATCAGGTAAGCTTGGTTCTTTACTTCATCAAATAAGTGAAAATAAAA
AGTTATTTAATTTACTCTGTTGGCATCGAGAAGCATCAAAGGAGAGGTATGAGCAGAATATAAG
GGCTGGAGGATGGGAAGGAGTGCTGTGACATGGTCATCTGCATATTATTGTTGCACACATGAAC
TACAACTGTGTTATATGCACAAGATCAAGCAAAAGATTCCAGAACCAACCGGAGATGGACTCAT
GGGGTTCCACCTGCAAATGAACAAACTACTGGTAGTTAATGGCTAGGAGAGAAGCAGCCATGGT
AAATTGCCCAGTCCAGTAAACAGACGCATTACCATGCACATGCAAGCAAATCTGGTTAAATTCA
GTGTTTTTTTGTCTTTAAGACATGAAAGTAGTAGAAGGTGTTGGGAAGAGGATAGGTTTTGAAG
GGAATGGGAGAGTGGTAAGAGAAGGGATTTGGGTGAATATGCTCAAAATATATTATGCACATGC
AGGAAATTATCAAAGAATAAAAAATGAACCTCAGAGGAGCACAGTAACTAAAATAGTAAACAGC
TCTGTTTGAGCACTATTCTTCCATCCTGGCTAACAAGACAGTCTGATTTAATGAGTGGAGTATT
AGGTGAACACAAAACTTGCTGAACCCCATACTGTGTGCACGAGACAGGGCCGAAAGACAAGGGC
AAGGCAACATGGAGAAGAAAGCGAGCCCTCATGTCAGAGTCTGGTTGAAGTCTTGAAGAATTAC
ACAATAACAGAATTTGCTATTAATGTTGTCAAAATGGATATTTTTTATAGAGAGATATTTTAAG
AATGTTAAAATGGTATTAAGACATGCTTAAATTTAGGATGCGAATAAATGACTCTTGAATTTGG
GTTTATTCCTTTCCCACTTATAAACCTGTAATTTTTCAAGGATTCCACAGGACTATAATAAACT
GTGTTTGTAGTAAAAAATGTATATAAATTTTATTGTGATATAAAA

hide sequence

RefSeq Acc Id:

XM_017595525 ⟹ XP_017451014

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	23,682,499 - 23,755,264 (-)	NCBI
mRatBN7.2	8	15,406,119 - 15,478,918 (-)	NCBI
Rnor_6.0	8	17,453,198 - 17,525,010 (-)	NCBI

Sequence:

show sequence

TTGTGACATCAGAAGAAAACCATCCAATCATAGTTGCTGCTTTTTTCTCTAAATTTCTTCTCCC
TTTTGCTAGTCTTTTCTCACTACCACAGTTTCATCTCTCGTCTGTCCAGTAGGTCTCTGTACAT
TATTTAGTATGCTAACACTATAACACTTCAGTTTATATTTGTAGTGAAAATTGGACCCAGAATC
TTAGAAGTGCTCAGCTGGAATACATCTCTTCTCATGAACTGCAGAACTCAAGATACTAAACATT
TGCTTTTTGGAAAATTCACTACCAATAAAAGGCCCAAGACTCTGGAACCAGCGAATCACACTTT
TTACAATGGATTTTCAGGACTCAGGCTGTAGATGCCGTAAGATAGGGCTTCAGCGATGTTCATA
TTGCAGACCCCAGGCCTGCAGTTGCAGTCAGAGGCACTCTCTGACCCAAAAAGGCATGGCCAGA
CCTAGGCAACTCCGGGGCCTAGGAATGTGCATTACTGCGGTGCTGGCCTCCTTCATCATGGGCT
TTACTGTGGGTTGGTTTACTAAGCCTCTCAAAGAAACAACTACTTCATCTGCTTATCATCAAAG
TATACAACAGAAACTCTTGTCTGAAATGAAAGCTGAAAATATTAGATCATTTCTTCGTTCCTTT
ACAAAACTTCCCCATCTGGCAGGAACGGAACAAAATTTACTACTTGCCAAGAAAATCCAAACAC
AATGGAAGAAATTCGGATTAGATTCAGCCAACCTGGTTCATTATGATGTTCTCTTGTCTTACCC
AAATGAGACAAATGCAAACTATGTATCCATTGTGGATGAACATGGAGCTGAGATTTTTAAAACA
TCATACCTTGAGCCACCACCAGATGGATATGAGAATGTCACAAACATCGTACCACCATATAATG
CATTTTCAGCCCATGGGATGCCAGAGGGAGAGCTTGTGTATGTCAACTATGCTCGTACTGAGGA
CTTCTTCAAACTAGAAAGAGAGATGCACATCAACTGCACTGGCAAGATTGTTATTGCAAGATAT
GGGAAAATCTTTAGAGGAAACAAAGTCAAAAATGCCATGCTAGCTGGAGCCATGGGAATCATTC
TGTACTCTGATCCAGCTGACTACTTTGCCCCTGGTGTACAGCCATATCCCAAAGGATGGAACCT
TCCTGGAGCTGCAGCCCAGAGAGGAAATGTCTTAAATCTGAATGGGGCAGGTGACCCACTCACT
CCAGGTTATCCAGCTAAAGAATATACCTTCAGACTTCCTGTTGAAGAAGCAGTGGGGATTCCAA
ACATACCTGTACATCCAATTGGATATAATGATGCAGAGAGACTGTTACGCAACTTGGGAGGAAC
TGCTCCACCAGACCAAAGCTGGAAGGGAAGTCTAAATGTTAGTTACAATATTGGGCCTGGCTTT
TCAGGAAGTGAATATTCCAGGAAAGTTCGAATGCATGTTCATAATATTAACAAAATCACAAGAA
TTTACAATGTAATTGGAACTATCAGAGGGTCTACAGAGCCTGACAGGTATGTCATTCTCGGAGG
TCATCGTGACTCCTGGGTGTTTGGAGGGATTGACCCTACGACTGGGACAGCAGTTTTGCAAGAG
ATTGCGCGAAGTTTTGGAAAACTGGTGAATGGAGGTTGGAAACCTAGGAGAACTATTATTTTTG
CCAGCTGGGATGCAGAAGAGTTTGGGCTGCTGGGTTCAACAGAATGGGCTGAAGAGAATGCAAA
GATCCTACAGGAGAGAAGCATTGCTTACATCAACTCAGATTCGGCTATAGAAGGTAATTACACT
CTCCGAGTTGATTGCACTCCTCTTCTCCACCAGTTGGTGTATAAAGTGGCAAGAGAGATTTCCA
GTCCTGATGATGGTTTTGAAAGTAAATCACTTTATGAAAGCTGGCTGGAAAAAGACCCTTCACC
TGAAAATAAAGAACGTCCTAGAATCAATAAGTTGGGATCTGGGAGTGATTTTGAGGCTTACTTT
CAAAGACTTGGAATTGCTTCAGGCAGAGCTCGCTACACTAAGAACAAGAAAACAGATAAATACA
GTAGCTATCCTGTATACCATACCATCTATGAGACGTTTGAATTAGTACAGAATTTTTATGATCC
CACATTTAAAAAGCAGCTTTCTGTGGCTCAGTTACGAGGAGCATTGGTATATGAGCTTGCGGAC
TGTGTAGTCATTCCTTTCAACATTCAAGACTATGCGAAAGCCTTGAAAAACTATGCAGCAAGTA
TCTTCAATTTATCCAAGAAACATGACCAGCAATTGAGAGATCATGGAGTATCATTTGATCCCTT
ATTTTCTGCTGTGAAAAACTTTTCAGAAGCTGCTTCAGACTTTCACAGAAGACTTACACAAGTT
GATCTTAATAATCCTACTGCAGTGAGAATTATGAATGACCAACAGATGCTTCTTGAAAGAGCAT
TCATAGATCCTCTTGGTTTACCGGGGAGGCCGTTCTACAGGCACATCATCTTTGCTCCAAGCAG
CCACAACAAATATGCTGGAGAATCATTCCCTGGGATTTATGATGCCATGTTTGATATTGAAAAT
AAGGCAGACACTCACCTGGCCTGGGCAGAAGTAAAGAAACACATTTCTATTGCAGCTTTCACAA
TTCAAGCAGCAGCAGGGACCCTGACAGATGTGTTATAGGAACTTTTCTGTCAAGTAGCTTCATC
ACTAAACTAAACTAAAGCTCAGTGTCTGAGAGTGAAATTGTTGGGGAGTGGGTCTTGGCCAAAT
GGATTCCCTGCAAAAGGTGCTGCTGAGAATCTGAAGAAAAAGGCATCTTTTTCTTTGATGATTT
ACAAAGGCAGACAATCCTAAAACTGTGATTGTCGTGACAGGTTTTATCCTCCTACCTTATTTAT
CTGTAAAGAGGGTACTTTTTTAAACTCATATGCATATCCAGTGAAAGTGAAAGAGGAAGCAAGC
CCAGTGCTCTCAGGCAGATGATTGCATTTGCTGTGGTATGTACACATACATGAATGCATTCTCA
TATCAGGTAAGCTTGGTTCTTTACTTCATCAAATAAGTGAAAATAAAAAGTTATTTAATTTACT
CTGTTGGCATCGAGAAGCATCAAAGGAGAGGTATGAGCAGAATATAAGGGCTGGAGGATGGGAA
GGAGTGCTGTGACATGGTCATCTGCATATTATTGTTGCACACATGAACTACAACTGTGTTATAT
GCACAAGATCAAGCAAAAGATTCCAGAACCAACCGGAGATGGACTCATGGGGTTCCACCTGCAA
ATGAACAAACTACTGGTAGTTAATGGCTAGGAGAGAAGCAGCCATGGTAAATTGCCCAGTCCAG
TAAACAGACGCATTACCATGCACATGCAAGCAAATCTGGTTAAATTCAGTGTTTTTTTGTCTTT
AAGACATGAAAGTAGTAGAAGGTGTTGGGAAGAGGATAGGTTTTGAAGGGAATGGGAGAGTGGT
AAGAGAAGGGATTTGGGTGAATATGCTCAAAATATATTATGCACATGCAGGAAATTATCAAAGA
ATAAAAAATGAACCTCAGAGGAGCACAGTAACTAAAATAGTAAACAGCTCTGTTTGAGCACTAT
TCTTCCATCCTGGCTAACAAGACAGTCTGATTTAATGAGTGGAGTATTAGGTGAACACAAAACT
TGCTGAACCCCATACTGTGTGCACGAGACAGGGCCGAAAGACAAGGGCAAGGCAACATGGAGAA
GAAAGCGAGCCCTCATGTCAGAGTCTGGTTGAAGTCTTGAAGAATTACACAATAACAGAATTTG
CTATTAATGTTGTCAAAATGGATATTTTTTATAGAGAGATATTTTAAGAATGTTAAAATGGTAT
TAAGACATGCTTAAATTTAGGATGCGAATAAATGACTCTTGAATTTGGGTTTATTCCTTTCCCA
CTTATAAACCTGTAATTTTTCAAGGATTCCACAGGACTATAATAAACTGTGTTTGTAGTAAAAA
ATGTATATAAATTTTATTGTGATATAAAA

hide sequence

RefSeq Acc Id:

XM_039080986 ⟹ XP_038936914

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	23,682,499 - 23,756,050 (-)	NCBI
mRatBN7.2	8	15,406,119 - 15,479,711 (-)	NCBI

RefSeq Acc Id:

XM_039080987 ⟹ XP_038936915

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	23,682,499 - 23,756,066 (-)	NCBI
mRatBN7.2	8	15,406,119 - 15,479,709 (-)	NCBI

RefSeq Acc Id:

XM_039080989 ⟹ XP_038936917

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	23,682,499 - 23,755,264 (-)	NCBI
mRatBN7.2	8	15,406,119 - 15,478,918 (-)	NCBI

RefSeq Acc Id:

XM_039080990 ⟹ XP_038936918

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	23,682,499 - 23,754,737 (-)	NCBI
mRatBN7.2	8	15,406,119 - 15,478,388 (-)	NCBI

RefSeq Acc Id:

XM_039080992 ⟹ XP_038936920

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	23,682,499 - 23,723,163 (-)	NCBI
mRatBN7.2	8	15,406,119 - 15,446,670 (-)	NCBI

RefSeq Acc Id:

XM_039080993 ⟹ XP_038936921

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	23,682,499 - 23,740,437 (-)	NCBI
mRatBN7.2	8	15,406,119 - 15,464,100 (-)	NCBI

RefSeq Acc Id:

XM_063265044 ⟹ XP_063121114

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	23,682,499 - 23,755,182 (-)	NCBI

RefSeq Acc Id:

XM_063265045 ⟹ XP_063121115

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	23,695,462 - 23,755,187 (-)	NCBI

RefSeq Acc Id:

XR_005487751

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	23,712,345 - 23,755,184 (-)	NCBI
mRatBN7.2	8	15,435,993 - 15,478,997 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_001100272	(Get FASTA)	NCBI Sequence Viewer
	NP_001419967	(Get FASTA)	NCBI Sequence Viewer
	NP_001419976	(Get FASTA)	NCBI Sequence Viewer
	NP_001419977	(Get FASTA)	NCBI Sequence Viewer
	NP_001419978	(Get FASTA)	NCBI Sequence Viewer
	XP_006242630	(Get FASTA)	NCBI Sequence Viewer
	XP_017451014	(Get FASTA)	NCBI Sequence Viewer
	XP_038936914	(Get FASTA)	NCBI Sequence Viewer
	XP_038936915	(Get FASTA)	NCBI Sequence Viewer
	XP_038936917	(Get FASTA)	NCBI Sequence Viewer
	XP_038936918	(Get FASTA)	NCBI Sequence Viewer
	XP_038936920	(Get FASTA)	NCBI Sequence Viewer
	XP_038936921	(Get FASTA)	NCBI Sequence Viewer
	XP_063121114	(Get FASTA)	NCBI Sequence Viewer
	XP_063121115	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAI68965	(Get FASTA)	NCBI Sequence Viewer
	EDL78416	(Get FASTA)	NCBI Sequence Viewer
	EDL78417	(Get FASTA)	NCBI Sequence Viewer
	EDL78418	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000007855
	ENSRNOP00000007855.5
	ENSRNOP00000072956
	ENSRNOP00000072956.2
	ENSRNOP00000079123.2
	ENSRNOP00000108654.1

RefSeq Acc Id:

NP_001100272 ⟸ NM_001106802

- UniProtKB:

D4A2Y7 (UniProtKB/TrEMBL), A6JNE9 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MDFQDSGCRCRKIGLQRCSYCRPQACSCSQRHSLTQKGMARPRQLRGLGMCITAVLASFIMGFT
VGWFTKPLKETTTSSAYHQSIQQKLLSEMKAENIRSFLRSFTKLPHLAGTEQNLLLAKKIQTQW
KKFGLDSANLVHYDVLLSYPNETNANYVSIVDEHGAEIFKTSYLEPPPDGYENVTNIVPPYNAF
SAHGMPEGELVYVNYARTEDFFKLEREMHINCTGKIVIARYGKIFRGNKVKNAMLAGAMGIILY
SDPADYFAPGVQPYPKGWNLPGAAAQRGNVLNLNGAGDPLTPGYPAKEYTFRLPVEEAVGIPNI
PVHPIGYNDAERLLRNLGGTAPPDQSWKGSLNVSYNIGPGFSGSEYSRKVRMHVHNINKITRIY
NVIGTIRGSTEPDRYVILGGHRDSWVFGGIDPTTGTAVLQEIARSFGKLVNGGWKPRRTIIFAS
WDAEEFGLLGSTEWAEENAKILQERSIAYINSDSAIEGNYTLRVDCTPLLHQLVYKVAREISSP
DDGFESKSLYESWLEKDPSPENKERPRINKLGSGSDFEAYFQRLGIASGRARYTKNKKTDKYSS
YPVYHTIYETFELVQNFYDPTFKKQLSVAQLRGALVYELADCVVIPFNIQDYAKALKNYAASIF
NLSKKHDQQLRDHGVSFDPLFSAVKNFSEAASDFHRRLTQVDLNNPTAVRIMNDQQMLLERAFI
DPLGLPGRPFYRHIIFAPSSHNKYAGESFPGIYDAMFDIENKADTHLAWAEVKKHISIAAFTIQ
AAAGTLTDVL

hide sequence

RefSeq Acc Id:

XP_006242630 ⟸ XM_006242568

- Peptide Label:

isoform X3

- Sequence:

show sequence

MKAENIRSFLRSFTKLPHLAGTEQNLLLAKKIQTQWKKFGLDSANLVHYDVLLSYPNETNANYV
SIVDEHGAEIFKTSYLEPPPDGYENVTNIVPPYNAFSAHGMPEGELVYVNYARTEDFFKLEREM
HINCTGKIVIARYGKIFRGNKVKNAMLAGAMGIILYSDPADYFAPGVQPYPKGWNLPGAAAQRG
NVLNLNGAGDPLTPGYPAKEYTFRLPVEEAVGIPNIPVHPIGYNDAERLLRNLGGTAPPDQSWK
GSLNVSYNIGPGFSGSEYSRKVRMHVHNINKITRIYNVIGTIRGSTEPDRYVILGGHRDSWVFG
GIDPTTGTAVLQEIARSFGKLVNGGWKPRRTIIFASWDAEEFGLLGSTEWAEENAKILQERSIA
YINSDSAIEGNYTLRVDCTPLLHQLVYKVAREISSPDDGFESKSLYESWLEKDPSPENKERPRI
NKLGSGSDFEAYFQRLGIASGRARYTKNKKTDKYSSYPVYHTIYETFELVQNFYDPTFKKQLSV
AQLRGALVYELADCVVIPFNIQDYAKALKNYAASIFNLSKKHDQQLRDHGVSFDPLFSAVKNFS
EAASDFHRRLTQVDLNNPTAVRIMNDQQMLLERAFIDPLGLPGRPFYRHIIFAPSSHNKYAGES
FPGIYDAMFDIENKADTHLAWAEVKKHISIAAFTIQAAAGTLTDVL

hide sequence

RefSeq Acc Id:	XP_017451014 ⟸ XM_017595525
- Peptide Label:	isoform X1
- UniProtKB:	D4A2Y7 (UniProtKB/TrEMBL), A6JNE9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MDFQDSGCRCRKIGLQRCSYCRPQACSCSQRHSLTQKGMARPRQLRGLGMCITAVLASFIMGFT VGWFTKPLKETTTSSAYHQSIQQKLLSEMKAENIRSFLRSFTKLPHLAGTEQNLLLAKKIQTQW KKFGLDSANLVHYDVLLSYPNETNANYVSIVDEHGAEIFKTSYLEPPPDGYENVTNIVPPYNAF SAHGMPEGELVYVNYARTEDFFKLEREMHINCTGKIVIARYGKIFRGNKVKNAMLAGAMGIILY SDPADYFAPGVQPYPKGWNLPGAAAQRGNVLNLNGAGDPLTPGYPAKEYTFRLPVEEAVGIPNI PVHPIGYNDAERLLRNLGGTAPPDQSWKGSLNVSYNIGPGFSGSEYSRKVRMHVHNINKITRIY NVIGTIRGSTEPDRYVILGGHRDSWVFGGIDPTTGTAVLQEIARSFGKLVNGGWKPRRTIIFAS WDAEEFGLLGSTEWAEENAKILQERSIAYINSDSAIEGNYTLRVDCTPLLHQLVYKVAREISSP DDGFESKSLYESWLEKDPSPENKERPRINKLGSGSDFEAYFQRLGIASGRARYTKNKKTDKYSS YPVYHTIYETFELVQNFYDPTFKKQLSVAQLRGALVYELADCVVIPFNIQDYAKALKNYAASIF NLSKKHDQQLRDHGVSFDPLFSAVKNFSEAASDFHRRLTQVDLNNPTAVRIMNDQQMLLERAFI DPLGLPGRPFYRHIIFAPSSHNKYAGESFPGIYDAMFDIENKADTHLAWAEVKKHISIAAFTIQ AAAGTLTDVL hide sequence

Ensembl Acc Id:

ENSRNOP00000072956 ⟸ ENSRNOT00000081679

Ensembl Acc Id:

ENSRNOP00000007855 ⟸ ENSRNOT00000007855

RefSeq Acc Id:	XP_038936914 ⟸ XM_039080986
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038936915 ⟸ XM_039080987
- Peptide Label:	isoform X1
- UniProtKB:	D4A2Y7 (UniProtKB/TrEMBL), A6JNE9 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038936917 ⟸ XM_039080989
- Peptide Label:	isoform X1
- UniProtKB:	D4A2Y7 (UniProtKB/TrEMBL), A6JNE9 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038936918 ⟸ XM_039080990
- Peptide Label:	isoform X1
- UniProtKB:	D4A2Y7 (UniProtKB/TrEMBL), A6JNE9 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038936921 ⟸ XM_039080993
- Peptide Label:	isoform X6

RefSeq Acc Id:	XP_038936920 ⟸ XM_039080992
- Peptide Label:	isoform X5

Ensembl Acc Id:

ENSRNOP00000079123 ⟸ ENSRNOT00000118338

RefSeq Acc Id:	XP_063121114 ⟸ XM_063265044
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_063121115 ⟸ XM_063265045
- Peptide Label:	isoform X4

Ensembl Acc Id:

ENSRNOP00000108654 ⟸ ENSRNOT00000133053

Protein Domains

PA Peptidase M28 Transferrin receptor-like dimerisation

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-D4A2Y7-F1-model_v2	AlphaFold	D4A2Y7	1-778	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1305872	AgrOrtholog
BioCyc Gene	G2FUF-31604	BioCyc
Ensembl Genes	ENSRNOG00000005955	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000007855	ENTREZGENE
	ENSRNOT00000007855.8	UniProtKB/TrEMBL
	ENSRNOT00000081679	ENTREZGENE
	ENSRNOT00000081679.3	UniProtKB/TrEMBL
	ENSRNOT00000118338.2	UniProtKB/TrEMBL
	ENSRNOT00000133053	ENTREZGENE
	ENSRNOT00000133053.1	UniProtKB/TrEMBL
Gene3D-CATH	1.20.930.40	UniProtKB/TrEMBL
	3.50.30.30	UniProtKB/TrEMBL
	Zn peptidases	UniProtKB/TrEMBL
InterPro	IPR003137	UniProtKB/TrEMBL
	PA_dom_sf	UniProtKB/TrEMBL
	Peptidase_M28	UniProtKB/TrEMBL
	Peptidase_M28B	UniProtKB/TrEMBL
	TFR-like_dimer_dom_sf	UniProtKB/TrEMBL
	Transferrin_rcpt-like_dimerise	UniProtKB/TrEMBL
KEGG Report	rno:300384	UniProtKB/TrEMBL
NCBI Gene	300384	ENTREZGENE
PANTHER	N-ACETYLATED-ALPHA-LINKED ACIDIC DIPEPTIDASE 2	UniProtKB/TrEMBL
	PTHR10404	UniProtKB/TrEMBL
Pfam	Peptidase_M28	UniProtKB/TrEMBL
	PF02225	UniProtKB/TrEMBL
	TFR_dimer	UniProtKB/TrEMBL
PhenoGen	Naalad2	PhenoGen
RatGTEx	ENSRNOG00000005955	RatGTEx
Superfamily-SCOP	PA domain	UniProtKB/TrEMBL
	Transferrin_rcpt-like_dimerise	UniProtKB/TrEMBL
	Zn-dependent exopeptidases	UniProtKB/TrEMBL
UniProt	A0A0G2K495_RAT	UniProtKB/TrEMBL
	A0A8I5ZMS5_RAT	UniProtKB/TrEMBL
	A6JNE9	ENTREZGENE, UniProtKB/TrEMBL
	A6JNF0	ENTREZGENE, UniProtKB/TrEMBL
	B5DF85_RAT	UniProtKB/TrEMBL
	D4A2Y7	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2008-04-30	Naalad2	N-acetylated alpha-linked acidic dipeptidase 2	Naalad2_predicted	N-acetylated alpha-linked acidic dipeptidase 2 (predicted)	'predicted' is removed	2292626	APPROVED
2005-01-12	Naalad2_predicted	N-acetylated alpha-linked acidic dipeptidase 2 (predicted)			Symbol and Name status set to approved	70820	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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