Dnah3 (dynein, axonemal, heavy chain 3) - Rat Genome Database

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Gene: Dnah3 (dynein, axonemal, heavy chain 3) Rattus norvegicus
Analyze
Symbol: Dnah3
Name: dynein, axonemal, heavy chain 3
RGD ID: 1305855
Description: Predicted to enable several functions, including ATP binding activity; dynein intermediate chain binding activity; and dynein light intermediate chain binding activity. Predicted to be involved in cilium movement. Predicted to be located in cytoplasm; microtubule; and motile cilium. Predicted to be part of axonemal dynein complex. Orthologous to human DNAH3 (dynein axonemal heavy chain 3); PARTICIPATES IN Huntington's disease pathway; INTERACTS WITH bisphenol A; Cuprizon; glyphosate.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: AABR07005597.1; Dnahc3; Dnahc3l; dynein axonemal heavy chain 3; dynein heavy chain 3, axonemal; dynein heavy chain 3, axonemal-like; dynein, axonemal, heavy chain 3-like; dynein, axonemal, heavy polypeptide 3; LOC108349819; LOC293539; LOC685921; LOC685934; similar to dynein, axonemal, heavy polypeptide 3
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81183,738,013 - 183,910,831 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1183,738,013 - 183,910,432 (-)EnsemblGRCr8
mRatBN7.21174,305,929 - 174,479,490 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1174,306,644 - 174,479,474 (-)EnsemblmRatBN7.2
Rnor_6.01189,708,985 - 189,865,431 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1189,837,284 - 189,864,944 (-)NCBIrn6Rnor6.0
Rnor_5.01196,622,934 - 196,794,610 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41178,234,649 - 178,311,979 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1172,057,287 - 172,228,414 (-)NCBICelera
RGSC_v3.11178,373,939 - 178,451,225 (-)NCBI
Cytogenetic Map1q35-q36NCBI
JBrowse:




Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
2. GOA pipeline RGD automated data pipeline
3. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:7657712   PMID:21873635  


Genomics

Comparative Map Data
Dnah3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81183,738,013 - 183,910,831 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1183,738,013 - 183,910,432 (-)EnsemblGRCr8
mRatBN7.21174,305,929 - 174,479,490 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1174,306,644 - 174,479,474 (-)EnsemblmRatBN7.2
Rnor_6.01189,708,985 - 189,865,431 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1189,837,284 - 189,864,944 (-)NCBIrn6Rnor6.0
Rnor_5.01196,622,934 - 196,794,610 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41178,234,649 - 178,311,979 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1172,057,287 - 172,228,414 (-)NCBICelera
RGSC_v3.11178,373,939 - 178,451,225 (-)NCBI
Cytogenetic Map1q35-q36NCBI
DNAH3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381620,933,111 - 21,159,459 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1620,933,111 - 21,159,441 (-)Ensemblhg38GRCh38
GRCh371620,944,433 - 21,170,762 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361620,851,977 - 21,078,263 (-)NCBIBuild 36Build 36hg18NCBI36
Build 341620,851,976 - 21,078,263NCBI
Celera1620,254,356 - 20,480,595 (-)NCBICelera
Cytogenetic Map16p12.3NCBI
HuRef1619,479,757 - 19,706,105 (-)NCBIHuRef
CHM1_11621,031,719 - 21,258,004 (-)NCBICHM1_1
T2T-CHM13v2.01620,864,026 - 21,090,383 (-)NCBIT2T-CHM13v2.0
Dnah3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm397119,520,555 - 119,694,520 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl7119,521,894 - 119,694,503 (-)EnsemblGRCm39 EnsemblGRCm39
GRCm387119,921,332 - 120,095,297 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl7119,922,671 - 120,095,280 (-)Ensemblmm10GRCm38
MGSCv377127,066,185 - 127,238,691 (-)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv367119,713,820 - 119,886,326 (-)NCBIMGSCv36mm8
Celera7119,841,993 - 120,004,372 (-)NCBICelera
Cytogenetic Map7F2NCBI
cM Map764.34NCBI
Dnah3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955493208,559 - 362,432 (-)Ensembl
ChiLan1.0NW_004955493211,458 - 363,988 (-)NCBIChiLan1.0ChiLan1.0
DNAH3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21822,098,483 - 22,318,418 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11626,618,996 - 26,838,924 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01617,258,456 - 17,476,027 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11620,964,186 - 21,188,542 (-)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1620,964,186 - 21,188,542 (-)EnsemblpanPan2panpan1.1
DNAH3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1624,268,272 - 24,437,556 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl624,277,981 - 24,437,511 (+)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha625,705,990 - 25,877,487 (+)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.0624,419,584 - 24,593,545 (+)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl624,424,482 - 24,593,553 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1624,222,952 - 24,394,421 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0624,118,000 - 24,289,665 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0624,502,122 - 24,673,628 (+)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Dnah3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024409344118,096,149 - 118,254,471 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365016,194,054 - 6,351,842 (-)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049365016,194,009 - 6,351,842 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
DNAH3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl324,920,284 - 25,126,092 (+)EnsemblsusScr11Sscrofa11.1
Sscrofa11.1324,911,160 - 25,127,017 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2325,693,032 - 25,776,713 (-)NCBISscrofa10.2Sscrofa10.2susScr3
DNAH3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1519,068,468 - 19,274,958 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl519,068,515 - 19,279,417 (-)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_02366606810,607,035 - 10,837,720 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Dnah3
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247827,074,710 - 7,239,551 (-)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_0046247827,072,258 - 7,244,308 (-)NCBIHetGla 1.0HetGla 1.0hetGla2
Dnah3
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v1281,588,788 - 81,758,452 (+)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Dnah3
1477 total Variants

QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1578778Pur4Proteinuria QTL 43.30.003urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)1160111531262090437Rat
1354646Kidm18Kidney mass QTL 185.7kidney mass (VT:0002707)calculated kidney weight (CMO:0000160)1160573753266453731Rat
2302378Insul11Insulin level QTL 113.25blood insulin amount (VT:0001560)serum insulin level (CMO:0000358)1153679879198679879Rat
1354653Despr9Despair related QTL 90.00019locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)1177339686222339686Rat
1578770Stresp23Stress response QTL 23kidney sympathetic nerve activity (VT:0004050)stimulated renal sympathetic nerve activity to basal renal sympathetic nerve activity ratio (CMO:0001786)1132760429191848948Rat
2293673Bss27Bone structure and strength QTL 2718.630.0001femur morphology trait (VT:0000559)femur midshaft cortical cross-sectional area (CMO:0001663)1181059071226059071Rat
61326Eae6Experimental allergic encephalomyelitis QTL 65.3body mass (VT:0001259)change in body weight (CMO:0002045)1182383862191260518Rat
2293677Bss41Bone structure and strength QTL 419.380.0001lumbar vertebra size trait (VT:0010518)lumbar vertebra cross-sectional area (CMO:0001689)1181059071226059071Rat
70160Bw18Body weight QTL 185.7body mass (VT:0001259)body weight (CMO:0000012)1153679879205813246Rat
1549830Bss1Bone structure and strength QTL 14.8femur strength trait (VT:0010010)femur ultimate force (CMO:0001675)1182039247227039247Rat
8694166Bw147Body weight QTL 1476.830.001body mass (VT:0001259)body weight gain (CMO:0000420)1153788989198788989Rat
70163Bw20Body weight QTL 205.1body mass (VT:0001259)body weight (CMO:0000012)1183564652228564652Rat
1600397Edcs4Endometrial carcinoma susceptibility QTL 42.2uterus morphology trait (VT:0001120)percentage of study population developing endometrioid carcinoma during a period of time (CMO:0001759)1176288899270518180Rat
1354636Lmblg1Limb length QTL 16.4tibia length (VT:0004357)tibia length (CMO:0000450)1160573753210707719Rat
1549837Hcar15Hepatocarcinoma resistance QTL 150.05liver integrity trait (VT:0010547)liver tumorous lesion number (CMO:0001068)1162548015270518180Rat
2293689Bss47Bone structure and strength QTL 477.250.0001lumbar vertebra size trait (VT:0010518)lumbar vertebra trabecular cross-sectional area (CMO:0001692)1181059071226059071Rat
152025235Bw194Body weight QTL 1944.86body mass (VT:0001259)1132966869252856240Rat
61341Bp26Blood pressure QTL 26arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1139442053223964440Rat
1598853Memor3Memory QTL 34.5exploratory behavior trait (VT:0010471)total horizontal distance resulting from voluntary locomotion in an experimental apparatus (CMO:0001443)1152919152268496042Rat
1354634Kidm12Kidney mass QTL 123.9kidney mass (VT:0002707)right kidney wet weight (CMO:0000082)1160573753210707719Rat
4889428Stresp24Stress response QTL 240.05heart pumping trait (VT:2000009)absolute change in electrocardiographic low frequency R-R spectral component to high frequency R-R spectral component ratio (CMO:0002162)1165278545210278545Rat
152025232Bw192Body weight QTL 1923.93body mass (VT:0001259)1127329268206393015Rat
1578759Uae30Urinary albumin excretion QTL 303.30.003urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)1160111531262090437Rat
61343Bp28Blood pressure QTL 28arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1161077990206077990Rat
2293693Bss22Bone structure and strength QTL 2233.520.0001femur morphology trait (VT:0000559)femur cross-sectional area (CMO:0001661)1181059071226059071Rat
1358902Bw47Body weight QTL 471.67body mass (VT:0001259)body weight (CMO:0000012)199645382221502378Rat
2300161Bmd43Bone mineral density QTL 438.40.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)1181059071226059071Rat
61347Bp197Blood pressure QTL 1974.2arterial blood pressure trait (VT:2000000)blood pressure measurement (CMO:0000003)1168063662213063662Rat
61348Bp30Blood pressure QTL 302.4arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1159894717207261263Rat
8655649Arrd1Age-related retinal degeneration QTL 14.89retinal layer morphology trait (VT:0003727)percentage of study population developing retinopathy during a period of time (CMO:0002453)1109493780193400781Rat
2303622Vencon6Ventilatory control QTL 60.001respiration trait (VT:0001943)respiration rate (CMO:0000289)1163992710208992710Rat
631214Bw61Body weight QTL613.40.0001intramuscular adipose amount (VT:0010044)intramuscular fat area (CMO:0001162)1182535316227535316Rat
7771612Cm80Cardiac mass QTL 808.4heart left ventricle mass (VT:0007031)heart left ventricle weight (CMO:0000776)1146080545243492863Rat
731168Bp154Blood pressure QTL 1543.4arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1103779152223964440Rat
631205Bp196Blood pressure QTL 19640.0001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)198879955208479939Rat
1300158Bp173Blood pressure QTL 1733.48arterial blood pressure trait (VT:2000000)blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)1155359438194575574Rat
2300174Bmd42Bone mineral density QTL 428.40.0001lumbar vertebra mineral mass (VT:0010511)bone mineral density (CMO:0001226)1181059071226059071Rat
631206Niddm40Non-insulin dependent diabetes mellitus QTL 40blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)1140833106185833106Rat
737828Hcas3Hepatocarcinoma susceptibility QTL 34.9liver integrity trait (VT:0010547)liver tumorous lesion volume to total liver volume ratio (CMO:0001082)1153679879232414077Rat
1354661Bw33Body weight QTL 335.2body mass (VT:0001259)body weight (CMO:0000012)1160573753266453731Rat
1358886Bp260Blood pressure QTL 2603.67arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1160574007235238518Rat
1331751Bp199Blood pressure QTL 1993.60022arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)1116099376191260518Rat
2293654Bss30Bone structure and strength QTL 3032.650.0001femur strength trait (VT:0010010)femur midshaft polar moment of inertia (CMO:0001669)1181059071226059071Rat
724531Uae5Urinary albumin excretion QTL 54urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)1160111426262090599Rat
2300187Bmd41Bone mineral density QTL 418.90.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)1181059071226059071Rat
1641895Bp298Blood pressure QTL 298arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1132760429191848948Rat
1354580Scort1Serum corticosterone level QTL 13.4blood corticosterone amount (VT:0005345)blood corticosterone level (CMO:0001172)1154961463266453731Rat
70209Niddm23Non-insulin dependent diabetes mellitus QTL 232.82blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)1162753891207753891Rat
1358294Bw37Body weight QTL 3750.000011body mass (VT:0001259)body weight (CMO:0000012)1180739993225739993Rat
634314Niddm44Non-insulin dependent diabetes mellitus QTL 44blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)151941022208479811Rat
2312420Pur17Proteinuria QTL 177.10.0001urine protein amount (VT:0005160)urine total protein excretion rate (CMO:0000756)1172718770228180370Rat
6893347Bw98Body weight QTL 980.20.53body mass (VT:0001259)body weight (CMO:0000012)1143092939188092939Rat
1354591Cm36Cardiac mass QTL 364.1heart left ventricle mass (VT:0007031)calculated heart weight (CMO:0000073)1111949780210707719Rat
2312558Glom17Glomerulus QTL 173.90.001kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)1175967553200707874Rat
10059597Bp377Blood pressure QTL 3773.420.025arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)134565911208798288Rat
631519Pia11Pristane induced arthritis QTL 115.3joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)193903998191260518Rat
619614Bp78Blood pressure QTL 780.001arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)1178547286206690557Rat
6893361Bw104Body weight QTL 1040.590.27body mass (VT:0001259)body weight (CMO:0000012)1143092939188092939Rat
724562Rends1Renal damage susceptibility QTL 10.05kidney glomerulus integrity trait (VT:0010546)index of glomerular damage (CMO:0001135)1139442053223964440Rat
738006Anxrr14Anxiety related response QTL 1440.00035locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)1140048073185048073Rat
1558645Bw55Body weight QTL 553.20.004body mass (VT:0001259)body weight (CMO:0000012)1143092939188092939Rat
1354615Cm32Cardiac mass QTL 325.2heart left ventricle mass (VT:0007031)heart left ventricle wet weight (CMO:0000071)1111949780210707719Rat
1354610Bw34Body weight QTL 344.1body mass (VT:0001259)body weight (CMO:0000012)1160573753266453731Rat
738028Anxrr12Anxiety related response QTL 124.90.00001locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)1140048073185048073Rat
1354620Kidm19Kidney mass QTL 194kidney mass (VT:0002707)calculated kidney weight (CMO:0000160)1160573753210707719Rat
1576310Schws2Schwannoma susceptibility QTL 20.029nervous system integrity trait (VT:0010566)percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017)1153788989198788989Rat
1354618Kidm15Kidney mass QTL 155kidney mass (VT:0002707)left kidney wet weight (CMO:0000083)1165707719210707719Rat
6903303Scl34Serum cholesterol QTL 342.50.0033blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)1173363824227535316Rat
631544Bp84Blood pressure QTL 845.6arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1132760429191190115Rat
152025212Bw190Body weight QTL 1905.7body mass (VT:0001259)1132966869206393015Rat
631548Bp88Blood pressure QTL 8850.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1140915717185915717Rat
1358189Cstrr1Cold stress response QTL 10.0001catecholamine amount (VT:0010543)urine norepinephrine level (CMO:0001629)1132760429191848948Rat
1354606Bp246Blood pressure QTL 2463.6arterial blood pressure trait (VT:2000000)pulse pressure (CMO:0000292)1111949780228180370Rat
7411599Foco11Food consumption QTL 1118.50.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)1153788989198788989Rat
1354602Bw35Body weight QTL 3512.2body mass (VT:0001259)body weight (CMO:0000012)1160573753210707719Rat
631670Iddm10Insulin dependent diabetes mellitus QTL 101.9blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)1183564652205813246Rat

Markers in Region
D1Rat363  
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr81183,845,288 - 183,845,505 (+)Marker Load Pipeline
mRatBN7.21174,413,943 - 174,414,160 (+)MAPPERmRatBN7.2
Rnor_6.01189,793,704 - 189,793,920NCBIRnor6.0
Rnor_5.01196,726,308 - 196,726,524UniSTSRnor5.0
Celera1172,162,990 - 172,163,206UniSTS
SHRSP x BN Map189.1199RGD
SHRSP x BN Map189.1199UniSTS
Cytogenetic Map1q35UniSTS
D1Got387  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21174,342,927 - 174,343,223 (+)MAPPERmRatBN7.2
Rnor_6.01189,723,029 - 189,723,324NCBIRnor6.0
Rnor_5.01196,657,301 - 196,657,596UniSTSRnor5.0
RGSC_v3.41178,269,860 - 178,270,155UniSTSRGSC3.4
Celera1172,091,961 - 172,092,256UniSTS
Cytogenetic Map1q35UniSTS
RH126502  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21174,474,868 - 174,475,112 (+)MAPPERmRatBN7.2
Rnor_6.01189,860,827 - 189,861,070NCBIRnor6.0
Rnor_5.01196,790,279 - 196,790,522UniSTSRnor5.0
Celera1172,223,818 - 172,224,061UniSTS
Cytogenetic Map1q35UniSTS
fj55b09.x1  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21174,318,892 - 174,319,352 (+)MAPPERmRatBN7.2
Rnor_6.01189,699,786 - 189,700,245NCBIRnor6.0
Rnor_5.01196,634,058 - 196,634,517UniSTSRnor5.0
RGSC_v3.41178,245,502 - 178,245,961UniSTSRGSC3.4
Celera1172,068,133 - 172,068,592UniSTS
Cytogenetic Map1q35UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
hemolymphoid system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
sensory system
visual system
4 1 11 39 9 48 28 8 40 16 29 9 9

Sequence


Ensembl Acc Id: ENSRNOT00000073205   ⟹   ENSRNOP00000066464
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1183,882,607 - 183,905,842 (-)Ensembl
mRatBN7.2 Ensembl1174,451,263 - 174,474,498 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000109805   ⟹   ENSRNOP00000095701
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1183,738,013 - 183,910,432 (-)Ensembl
mRatBN7.2 Ensembl1174,306,644 - 174,479,474 (-)Ensembl
RefSeq Acc Id: NM_001427640   ⟹   NP_001414569
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81183,738,013 - 183,910,432 (-)NCBI
RefSeq Acc Id: XM_039101168   ⟹   XP_038957096
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81183,739,386 - 183,910,831 (-)NCBI
mRatBN7.21174,305,929 - 174,479,489 (-)NCBI
Protein Sequences
Protein RefSeqs NP_001414569 (Get FASTA)   NCBI Sequence Viewer  
  XP_038957096 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein BAA05502 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000066464.2
  ENSRNOP00000095701
  ENSRNOP00000095701.1
RefSeq Acc Id: XP_038957096   ⟸   XM_039101168
- Peptide Label: isoform X1
- UniProtKB: A0A8I6GLR7 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSRNOP00000095701   ⟸   ENSRNOT00000109805
Ensembl Acc Id: ENSRNOP00000066464   ⟸   ENSRNOT00000073205
RefSeq Acc Id: NP_001414569   ⟸   NM_001427640
- UniProtKB: A0A8I6GLR7 (UniProtKB/TrEMBL)
Protein Domains
AAA+ ATPase

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-M0RAB9-F1-model_v2 AlphaFold M0RAB9 1-642 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1305855 AgrOrtholog
BioCyc Gene G2FUF-57635 BioCyc
Ensembl Genes ENSRNOG00000050426 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000073205.3 UniProtKB/TrEMBL
  ENSRNOT00000109805 ENTREZGENE
  ENSRNOT00000109805.2 UniProtKB/TrEMBL
Gene3D-CATH 1.10.287.2620 UniProtKB/TrEMBL
  1.10.472.130 UniProtKB/TrEMBL
  1.10.8.1220 UniProtKB/TrEMBL
  1.10.8.710 UniProtKB/TrEMBL
  1.10.8.720 UniProtKB/TrEMBL
  1.20.1270.280 UniProtKB/TrEMBL
  1.20.140.100 UniProtKB/TrEMBL
  1.20.58.1120 UniProtKB/TrEMBL
  1.20.920.20 UniProtKB/TrEMBL
  1.20.920.30 UniProtKB/TrEMBL
  3.10.490.20 UniProtKB/TrEMBL
  3.20.180.20 UniProtKB/TrEMBL
  3.40.50.300 UniProtKB/TrEMBL
  6.10.140.1060 UniProtKB/TrEMBL
InterPro AAA+_ATPase UniProtKB/TrEMBL
  AAA_6 UniProtKB/TrEMBL
  AAA_9 UniProtKB/TrEMBL
  AAA_lid_11 UniProtKB/TrEMBL
  AAA_lid_11_sf UniProtKB/TrEMBL
  DHC_fam UniProtKB/TrEMBL
  DNAH3_AAA_lid_1 UniProtKB/TrEMBL
  Dynein_2_N UniProtKB/TrEMBL
  Dynein_AAA1S UniProtKB/TrEMBL
  Dynein_AAA5_ext UniProtKB/TrEMBL
  Dynein_C UniProtKB/TrEMBL
  Dynein_C_barrel UniProtKB/TrEMBL
  Dynein_HC_stalk UniProtKB/TrEMBL
  Dynein_heavy_chain_D4_dom UniProtKB/TrEMBL
  Dynein_heavy_D6_P-loop UniProtKB/TrEMBL
  Dynein_heavy_linker UniProtKB/TrEMBL
  Dynein_linker_3 UniProtKB/TrEMBL
  P-loop_NTPase UniProtKB/TrEMBL
NCBI Gene Dnah3 ENTREZGENE
PANTHER DYNEIN HEAVY CHAIN 6, AXONEMAL-LIKE-RELATED UniProtKB/TrEMBL
  DYNEIN, AXONEMAL, HEAVY CHAIN 3 UniProtKB/TrEMBL
Pfam AAA_6 UniProtKB/TrEMBL
  AAA_7 UniProtKB/TrEMBL
  AAA_8 UniProtKB/TrEMBL
  AAA_9 UniProtKB/TrEMBL
  AAA_lid_1 UniProtKB/TrEMBL
  AAA_lid_11 UniProtKB/TrEMBL
  DHC_N2 UniProtKB/TrEMBL
  Dynein_AAA_lid UniProtKB/TrEMBL
  Dynein_C UniProtKB/TrEMBL
  Dynein_heavy UniProtKB/TrEMBL
  PF12777 UniProtKB/TrEMBL
PhenoGen Dnah3 PhenoGen
RatGTEx ENSRNOG00000050426 RatGTEx
SMART AAA UniProtKB/TrEMBL
Superfamily-SCOP SSF52540 UniProtKB/TrEMBL
UniProt A0A8I6GLR7 ENTREZGENE, UniProtKB/TrEMBL
  M0RAB9_RAT UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2022-06-02 Dnah3  dynein, axonemal, heavy chain 3  AABR07005597.1    Data merged from RGD:15005963 737654 PROVISIONAL
2021-09-02 AABR07005597.1    Dnah3  dynein, axonemal, heavy chain 3  Symbol and/or name change 19259462 PROVISIONAL
2021-08-09 Dnah3  dynein, axonemal, heavy chain 3  AABR07005597.1    Symbol and/or name change 19259462 PROVISIONAL
2021-03-09 Dnah3  dynein, axonemal, heavy chain 3  LOC108349819  dynein heavy chain 3, axonemal-like  Data merged from RGD:11490434 737654 PROVISIONAL
2019-11-08 AABR07005597.1        Symbol and Name status set to provisional 45752 PROVISIONAL
2016-08-02 LOC108349819  dynein heavy chain 3, axonemal-like      Symbol and Name status set to provisional 70820 PROVISIONAL
2015-07-29 Dnah3  dynein, axonemal, heavy chain 3  LOC685934  similar to dynein, axonemal, heavy polypeptide 3  Data merged from RGD:1587840 737654 PROVISIONAL
2013-04-17 Dnah3  dynein, axonemal, heavy chain 3  LOC685921  similar to dynein, axonemal, heavy polypeptide 3  Data merged from RGD:1587853 737654 PROVISIONAL
2013-02-19 Dnah3  dynein, axonemal, heavy chain 3  Dnahc3l  dynein, axonemal, heavy chain 3-like  Data merged from RGD:621796 737654 APPROVED
2008-10-17 Dnah3  dynein, axonemal, heavy chain 3  Dnahc3  dynein, axonemal, heavy chain 3  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-03-04 Dnahc3l  dynein, axonemal, heavy chain 3-like  Dnahc3  dynein, axonemal, heavy chain 3  Symbol and Name updated 1299863 APPROVED
2008-03-04 Dnahc3  dynein, axonemal, heavy chain 3  Dnah3_predicted  dynein, axonemal, heavy polypeptide 3 (predicted)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2006-11-19 LOC685934  similar to dynein, axonemal, heavy polypeptide 3      Symbol and Name status set to provisional 70820 PROVISIONAL
2006-11-19 LOC685921  similar to dynein, axonemal, heavy polypeptide 3      Symbol and Name status set to provisional 70820 PROVISIONAL
2005-01-12 Dnah3_predicted  dynein, axonemal, heavy polypeptide 3 (predicted)      Symbol and Name status set to approved 70820 APPROVED
2004-09-10 Dnahc3  dynein, axonemal, heavy chain 3  Dnah3  dynein, axonemal, heavy polypeptide 3  Symbol and Name updated 1299863 APPROVED
2002-08-07 Dnah3  dynein, axonemal, heavy polypeptide 3      Symbol and Name status set to provisional 70820 PROVISIONAL