Cndp2 (carnosine dipeptidase 2) - Rat Genome Database

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Gene: Cndp2 (carnosine dipeptidase 2) Rattus norvegicus
Analyze
Symbol: Cndp2
Name: carnosine dipeptidase 2
RGD ID: 1305827
Description: Predicted to enable dipeptidase activity. Predicted to be involved in proteolysis. Predicted to be located in cytoplasm and nucleoplasm. Predicted to be active in cytosol. Orthologous to human CNDP2 (carnosine dipeptidase 2); PARTICIPATES IN histidine metabolic pathway; histidinemia pathway; INTERACTS WITH 17alpha-ethynylestradiol; 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: CNDP dipeptidase 2 (metallopeptidase M20 family); cytosolic non-specific dipeptidase; cytosolic nonspecific dipeptidase 2; LOC291394; threonyl dipeptidase
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81880,314,799 - 80,331,900 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1880,314,801 - 80,331,900 (-)EnsemblGRCr8
mRatBN7.21878,039,924 - 78,057,030 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1878,039,932 - 78,056,922 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1880,142,709 - 80,159,761 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01880,814,783 - 80,831,835 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01878,650,467 - 78,667,521 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01881,521,966 - 81,539,065 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1881,521,968 - 81,539,065 (-)Ensemblrn6Rnor6.0
Rnor_5.01880,566,927 - 80,584,026 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41881,215,851 - 81,232,949 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1876,656,181 - 76,673,279 (-)NCBICelera
RGSC_v3.11881,289,302 - 81,306,399 (-)NCBI
Cytogenetic Map18q12.3NCBI
JBrowse:




Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
1,2-dimethylhydrazine  (ISO)
17alpha-ethynylestradiol  (EXP)
17beta-estradiol  (EXP,ISO)
17beta-hydroxy-17-methylestra-4,9,11-trien-3-one  (ISO)
2,2',4,4'-Tetrabromodiphenyl ether  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4,6-tribromophenol  (ISO)
2,4,6-trinitrotoluene  (EXP)
2,6-dimethoxyphenol  (ISO)
2,6-dinitrotoluene  (EXP)
3-isobutyl-1-methyl-7H-xanthine  (ISO)
4,4'-sulfonyldiphenol  (ISO)
4-hydroxyphenyl retinamide  (ISO)
4-nonylphenol  (ISO)
4-tert-Octylphenol  (ISO)
7,12-dimethyltetraphene  (ISO)
aflatoxin B1  (ISO)
alpha-Zearalanol  (EXP)
amitrole  (EXP)
amphetamine  (EXP)
ampicillin  (EXP)
antirheumatic drug  (ISO)
atrazine  (EXP,ISO)
azoxystrobin  (EXP)
benzo[a]pyrene  (ISO)
beta-lapachone  (ISO)
beta-naphthoflavone  (ISO)
bis(2-ethylhexyl) phthalate  (ISO)
bisphenol A  (EXP,ISO)
bisphenol AF  (ISO)
Bisphenol B  (ISO)
bisphenol F  (ISO)
Brodifacoum  (EXP)
Butylbenzyl phthalate  (ISO)
caffeine  (ISO)
captan  (ISO)
carbon nanotube  (ISO)
CGP 52608  (ISO)
chloropicrin  (ISO)
chlorpyrifos  (EXP)
ciguatoxin CTX1B  (ISO)
cobalt dichloride  (ISO)
cyclosporin A  (ISO)
decabromodiphenyl ether  (EXP,ISO)
dexamethasone  (ISO)
diazinon  (ISO)
Dibutyl phosphate  (ISO)
dibutyl phthalate  (ISO)
dicrotophos  (ISO)
diethylstilbestrol  (ISO)
dimethyl sulfoxide  (ISO)
diquat  (ISO)
diuron  (EXP)
ethanol  (ISO)
finasteride  (EXP)
folic acid  (ISO)
folpet  (ISO)
furfural  (ISO)
genistein  (ISO)
gentamycin  (EXP)
glyphosate  (EXP)
imidacloprid  (EXP)
indometacin  (EXP,ISO)
isotretinoin  (ISO)
ivermectin  (ISO)
lead diacetate  (ISO)
lead(0)  (ISO)
methapyrilene  (EXP)
methimazole  (EXP)
metronidazole  (EXP)
mono(2-ethylhexyl) phthalate  (ISO)
neomycin  (EXP)
nimesulide  (EXP)
p-tert-Amylphenol  (ISO)
paracetamol  (ISO)
perfluorooctanoic acid  (EXP)
progesterone  (ISO)
quinoline  (ISO)
resveratrol  (ISO)
sodium arsenate  (ISO)
sodium arsenite  (ISO)
sodium chloride  (ISO)
sulfadimethoxine  (EXP)
temozolomide  (ISO)
tert-butyl hydroperoxide  (ISO)
tetrachloromethane  (ISO)
thapsigargin  (EXP)
thiabendazole  (EXP)
thioacetamide  (EXP)
thiram  (ISO)
titanium dioxide  (ISO)
triphenyl phosphate  (EXP,ISO)
urethane  (ISO)
valdecoxib  (EXP)
valproic acid  (ISO)
vancomycin  (EXP)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
cytoplasm  (IEA)
cytosol  (IBA,IEA,ISO,ISS)
nucleoplasm  (IEA,ISO)

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. GOA pipeline RGD automated data pipeline
3. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:198184   PMID:204065   PMID:736882   PMID:1235912   PMID:4187938   PMID:7444718   PMID:12477932   PMID:15326124   PMID:19056867   PMID:20458337   PMID:23376485   PMID:23533145  
PMID:29476059  


Genomics

Comparative Map Data
Cndp2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81880,314,799 - 80,331,900 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1880,314,801 - 80,331,900 (-)EnsemblGRCr8
mRatBN7.21878,039,924 - 78,057,030 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1878,039,932 - 78,056,922 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1880,142,709 - 80,159,761 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01880,814,783 - 80,831,835 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01878,650,467 - 78,667,521 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01881,521,966 - 81,539,065 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1881,521,968 - 81,539,065 (-)Ensemblrn6Rnor6.0
Rnor_5.01880,566,927 - 80,584,026 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41881,215,851 - 81,232,949 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1876,656,181 - 76,673,279 (-)NCBICelera
RGSC_v3.11881,289,302 - 81,306,399 (-)NCBI
Cytogenetic Map18q12.3NCBI
CNDP2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381874,496,363 - 74,523,454 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1874,494,112 - 74,523,557 (+)Ensemblhg38GRCh38
GRCh371872,163,598 - 72,190,689 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361870,314,577 - 70,339,336 (+)NCBIBuild 36Build 36hg18NCBI36
Build 341870,314,576 - 70,339,336NCBI
Celera1869,030,559 - 69,057,800 (+)NCBICelera
Cytogenetic Map18q22.3NCBI
HuRef1868,895,464 - 68,922,779 (+)NCBIHuRef
CHM1_11872,158,824 - 72,186,014 (+)NCBICHM1_1
T2T-CHM13v2.01874,723,735 - 74,750,816 (+)NCBIT2T-CHM13v2.0
Cndp2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391884,685,590 - 84,703,827 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1884,685,590 - 84,703,827 (-)EnsemblGRCm39 EnsemblGRCm39
GRCm381884,667,465 - 84,685,702 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1884,667,465 - 84,685,702 (-)Ensemblmm10GRCm38
MGSCv371884,836,861 - 84,855,025 (-)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv361884,801,662 - 84,819,826 (-)NCBIMGSCv36mm8
Celera1885,734,462 - 85,752,580 (-)NCBICelera
Cytogenetic Map18E4NCBI
cM Map1857.53NCBI
Cndp2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540257,938,276 - 57,960,056 (+)Ensembl
ChiLan1.0NW_00495540257,939,003 - 57,960,056 (+)NCBIChiLan1.0ChiLan1.0
CNDP1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21792,070,643 - 92,132,773 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11877,763,264 - 77,825,396 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01867,920,453 - 67,982,843 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11871,162,331 - 71,262,787 (+)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1871,162,331 - 71,188,879 (+)EnsemblpanPan2panpan1.1
PanPan1.1 Ensembl1871,199,916 - 71,250,847 (+)EnsemblpanPan2panpan1.1
CNDP2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.114,914,739 - 4,931,700 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl14,914,737 - 4,929,449 (-)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha15,922,186 - 5,939,148 (-)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.014,725,237 - 4,742,206 (-)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl14,725,241 - 4,742,200 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.114,764,150 - 4,781,110 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.014,717,626 - 4,734,583 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.014,888,578 - 4,905,557 (-)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Cndp2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494418,676,542 - 18,694,968 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366163,998,289 - 4,012,904 (-)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049366163,997,670 - 4,016,077 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CNDP2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1149,565,335 - 149,583,998 (-)EnsemblsusScr11Sscrofa11.1
Sscrofa11.11149,565,327 - 149,584,319 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21165,529,517 - 165,548,510 (+)NCBISscrofa10.2Sscrofa10.2susScr3
CNDP2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1185,376,201 - 5,400,778 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl185,375,729 - 5,397,100 (-)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_02366606020,483,123 - 20,507,916 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Cndp2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248066,172,809 - 6,195,644 (-)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_0046248066,174,621 - 6,196,039 (-)NCBIHetGla 1.0HetGla 1.0hetGla2
Cndp2
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v11547,684,254 - 47,701,339 (+)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Cndp2
163 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:226
Count of miRNA genes:163
Interacting mature miRNAs:178
Transcripts:ENSRNOT00000021400
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1331733Bp233Blood pressure QTL 2333.97196arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)182507112683910656Rat
2303584Gluco55Glucose level QTL 552blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)185079521286134022Rat
1331730Scl27Serum cholesterol level QTL 273.826blood HDL cholesterol amount (VT:0000184)serum high density lipoprotein cholesterol level (CMO:0000361)185449080186134022Rat
1331741Bp232Blood pressure QTL 2323.59112arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)182349405785487725Rat
631834Sach3Saccharin preference QTL 33.90.01consumption behavior trait (VT:0002069)calculated saccharin drink intake volume (CMO:0001600)183857591983575919Rat
738008Hcar14Hepatocarcinoma resistance QTL 144.3liver integrity trait (VT:0010547)liver nonremodeling tumorous lesion number (CMO:0001462)185782524385493247Rat
634333Pia19Pristane induced arthritis QTL 193.4joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)187627210481806852Rat
631518Bw11Body weight QTL 112.8body mass (VT:0001259)body weight (CMO:0000012)183612162681121626Rat
6893683Bw110Body weight QTL 1102.70.002body mass (VT:0001259)body weight (CMO:0000012)184562030686134022Rat
8694366Abfw8Abdominal fat weight QTL 86.380.001visceral adipose mass (VT:0010063)abdominal fat pad weight to body weight ratio (CMO:0000095)184891573786134022Rat
70172Eae15Experimental allergic encephalomyelitis QTL 150.001nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis incidence/prevalence measurement (CMO:0001046)187948431184129249Rat
7794793Mcs34Mammary carcinoma susceptibility QTL 341.54mammary gland integrity trait (VT:0010552)mammary tumor incidence/prevalence measurement (CMO:0000946)186563556785897775Rat
9589041Epfw12Epididymal fat weight QTL 1217.080.001epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)184891573786134022Rat
8694432Bw165Body weight QTL 1653.810.001body lean mass (VT:0010483)lean tissue morphological measurement (CMO:0002184)184891573786134022Rat
1358193Emca2Estrogen-induced mammary cancer QTL 21.6mammary gland integrity trait (VT:0010552)post-insult time to mammary tumor formation (CMO:0000345)186584644786134022Rat
1598832Glom11Glomerulus QTL 112.9kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)185326667186134022Rat
1600373Mamtr6Mammary tumor resistance QTL 6mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)181955353285493247Rat
1331770Bp234Blood pressure QTL 2343.807arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)184562030686134022Rat
2303571Bw92Body weight QTL 923body mass (VT:0001259)body weight (CMO:0000012)185079521286134022Rat
1578667Bss21Bone structure and strength QTL 213.5femur morphology trait (VT:0000559)femoral neck cortical cross-sectional area (CMO:0001702)181206648285493247Rat
2303120Mamtr8Mammary tumor resistance QTL 80.001mammary gland integrity trait (VT:0010552)mammary tumor growth rate (CMO:0000344)183161050585493247Rat
724542Kidm2Kidney mass QTL 22.6kidney mass (VT:0002707)calculated kidney weight (CMO:0000160)186144685386134022Rat
61367Iddm4Insulin dependent diabetes mellitus QTL 42.330.0074blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)184046238385462383Rat
1578661Bss20Bone structure and strength QTL 203.7femur morphology trait (VT:0000559)femoral neck cross-sectional area (CMO:0001697)181206648285493247Rat
1331754Bp230Blood pressure QTL 2304.61609arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)181564228086134022Rat

Markers in Region
BI283655  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21878,040,254 - 78,040,455 (+)MAPPERmRatBN7.2
Rnor_6.01881,522,297 - 81,522,497NCBIRnor6.0
Rnor_5.01880,567,258 - 80,567,458UniSTSRnor5.0
RGSC_v3.41881,216,182 - 81,216,382UniSTSRGSC3.4
Celera1876,656,512 - 76,656,712UniSTS
Cytogenetic Map18q12.3UniSTS
RH139733  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21878,056,328 - 78,056,547 (+)MAPPERmRatBN7.2
Rnor_6.01881,538,364 - 81,538,582NCBIRnor6.0
Rnor_5.01880,583,325 - 80,583,543UniSTSRnor5.0
RGSC_v3.41881,232,248 - 81,232,466UniSTSRGSC3.4
Celera1876,672,578 - 76,672,796UniSTS
Cytogenetic Map18q12.3UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 67 165 91 90 59 92 59 6 356 192 11 144 81 92 31 17 17

Sequence


Ensembl Acc Id: ENSRNOT00000021400   ⟹   ENSRNOP00000021400
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1880,314,801 - 80,331,900 (-)Ensembl
mRatBN7.2 Ensembl1878,039,932 - 78,056,922 (-)Ensembl
Rnor_6.0 Ensembl1881,521,968 - 81,539,065 (-)Ensembl
RefSeq Acc Id: NM_001010920   ⟹   NP_001010920
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81880,314,799 - 80,331,900 (-)NCBI
mRatBN7.21878,039,924 - 78,057,030 (-)NCBI
Rnor_6.01881,521,966 - 81,539,065 (-)NCBI
Rnor_5.01880,566,927 - 80,584,026 (-)NCBI
RGSC_v3.41881,215,851 - 81,232,949 (-)RGD
Celera1876,656,181 - 76,673,279 (-)RGD
Sequence:
RefSeq Acc Id: XM_006254999   ⟹   XP_006255061
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81880,314,799 - 80,331,845 (-)NCBI
mRatBN7.21878,039,924 - 78,056,970 (-)NCBI
Rnor_6.01881,521,966 - 81,538,979 (-)NCBI
Rnor_5.01880,566,927 - 80,584,026 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001010920 (Get FASTA)   NCBI Sequence Viewer  
  XP_006255061 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAH95904 (Get FASTA)   NCBI Sequence Viewer  
  AAS75316 (Get FASTA)   NCBI Sequence Viewer  
  EDL75185 (Get FASTA)   NCBI Sequence Viewer  
  EDL75186 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000021400
  ENSRNOP00000021400.3
GenBank Protein Q6Q0N1 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_001010920   ⟸   NM_001010920
- UniProtKB: Q6Q0N1 (UniProtKB/Swiss-Prot),   A6K5L5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006255061   ⟸   XM_006254999
- Peptide Label: isoform X1
- UniProtKB: Q6Q0N1 (UniProtKB/Swiss-Prot),   A6K5L5 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000021400   ⟸   ENSRNOT00000021400
Protein Domains
Peptidase M20 dimerisation

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q6Q0N1-F1-model_v2 AlphaFold Q6Q0N1 1-475 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13700894
Promoter ID:EPDNEW_R11418
Type:single initiation site
Name:Cndp2_1
Description:carnosine dipeptidase 2
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01881,539,025 - 81,539,085EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1305827 AgrOrtholog
BioCyc Gene G2FUF-6749 BioCyc
Ensembl Genes ENSRNOG00000015591 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSRNOT00000021400 ENTREZGENE
  ENSRNOT00000021400.5 UniProtKB/Swiss-Prot
Gene3D-CATH 3.30.70.360 UniProtKB/Swiss-Prot
  Zn peptidases UniProtKB/Swiss-Prot
IMAGE_CLONE IMAGE:7110846 IMAGE-MGC_LOAD
InterPro ArgE/DapE_CS UniProtKB/Swiss-Prot
  CNDP/DUG1 UniProtKB/Swiss-Prot
  Cyt/Met_Dipeptidase UniProtKB/Swiss-Prot
  Peptidase_M20 UniProtKB/Swiss-Prot
  Peptidase_M20_dimer UniProtKB/Swiss-Prot
KEGG Report rno:291394 UniProtKB/Swiss-Prot
MGC_CLONE MGC:93824 IMAGE-MGC_LOAD
NCBI Gene 291394 ENTREZGENE
PANTHER BETA-ALA-HIS DIPEPTIDASE UniProtKB/Swiss-Prot
  CYTOSOLIC NON-SPECIFIC DIPEPTIDASE UniProtKB/Swiss-Prot
Pfam M20_dimer UniProtKB/Swiss-Prot
  Peptidase_M20 UniProtKB/Swiss-Prot
PhenoGen Cndp2 PhenoGen
PIRSF CNDP_dipeptidase UniProtKB/Swiss-Prot
PROSITE ARGE_DAPE_CPG2_2 UniProtKB/Swiss-Prot
RatGTEx ENSRNOG00000015591 RatGTEx
Superfamily-SCOP Zn-dependent exopeptidases UniProtKB/Swiss-Prot
UniProt A6K5L5 ENTREZGENE, UniProtKB/TrEMBL
  CNDP2_RAT UniProtKB/Swiss-Prot, ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2017-03-29 Cndp2  carnosine dipeptidase 2  Cndp2  CNDP dipeptidase 2 (metallopeptidase M20 family)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2005-12-06 Cndp2  CNDP dipeptidase 2 (metallopeptidase M20 family)  Cndp2_predicted  CNDP dipeptidase 2 (metallopeptidase M20 family) (predicted)  Symbol and Name updated 1559027 APPROVED
2005-01-12 Cndp2_predicted  CNDP dipeptidase 2 (metallopeptidase M20 family) (predicted)      Symbol and Name status set to approved 70820 APPROVED