Osr2 (odd-skipped related transcription factor 2) - Rat Genome Database

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Gene: Osr2 (odd-skipped related transcription factor 2) Rattus norvegicus
Analyze
Symbol: Osr2
Name: odd-skipped related transcription factor 2 (Ensembl:odd-skipped related transciption factor 2)
RGD ID: 1305812
Description: Predicted to enable DNA-binding transcription activator activity, RNA polymerase II-specific and RNA polymerase II transcription regulatory region sequence-specific DNA binding activity. Predicted to be involved in several processes, including embryonic limb morphogenesis; kidney development; and regulation of transcription by RNA polymerase II. Predicted to act upstream of or within positive regulation of stem cell proliferation. Predicted to be active in nucleus. Orthologous to human OSR2 (odd-skipped related transciption factor 2); INTERACTS WITH 17alpha-ethynylestradiol; 17beta-estradiol 3-benzoate; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: LOC315039; odd-skipped related 2; odd-skipped related 2 (Drosophila); odd-skipped related transciption factor 2; protein odd-skipped-related 2
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8768,372,500 - 68,380,195 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl768,373,049 - 68,380,805 (+)EnsemblGRCr8
mRatBN7.2766,487,841 - 66,495,003 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl766,487,839 - 66,495,224 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx768,376,405 - 68,383,532 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0770,579,039 - 70,586,164 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0770,446,883 - 70,454,008 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0774,047,820 - 74,055,096 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl774,047,814 - 74,055,256 (+)Ensemblrn6Rnor6.0
Rnor_5.0774,213,945 - 74,221,077 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4770,769,123 - 70,776,248 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera763,576,550 - 63,583,675 (+)NCBICelera
RGSC_v3.1770,789,852 - 70,796,977 (+)NCBI
Cytogenetic Map7q22NCBI
JBrowse:




Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
17alpha-ethynylestradiol  (EXP)
17beta-estradiol  (ISO)
17beta-estradiol 3-benzoate  (EXP)
17beta-hydroxy-17-methylestra-4,9,11-trien-3-one  (ISO)
2,2',5,5'-tetrachlorobiphenyl  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP)
2,3,7,8-Tetrachlorodibenzofuran  (EXP)
2,4-dibromophenyl 2,4,5-tribromophenyl ether  (ISO)
3,3',4,4',5-pentachlorobiphenyl  (EXP)
3-chloropropane-1,2-diol  (EXP)
3-isobutyl-1-methyl-7H-xanthine  (ISO)
3-methylcholanthrene  (ISO)
4,4'-sulfonyldiphenol  (ISO)
acrylamide  (EXP)
actinomycin D  (ISO)
aflatoxin B1  (ISO)
aldrin  (ISO)
amphetamine  (EXP)
aristolochic acid A  (ISO)
Azaspiracid  (ISO)
benzo[a]pyrene  (ISO)
benzo[a]pyrene diol epoxide I  (ISO)
beta-lapachone  (ISO)
bisphenol A  (EXP,ISO)
bisphenol F  (ISO)
butanal  (ISO)
cadmium atom  (ISO)
cadmium dichloride  (ISO)
calcitriol  (ISO)
carbamazepine  (ISO)
choline  (ISO)
cisplatin  (ISO)
copper atom  (EXP,ISO)
copper(0)  (EXP,ISO)
copper(II) sulfate  (ISO)
cyclosporin A  (ISO)
dexamethasone  (ISO)
diallyl trisulfide  (EXP)
dibutyl phthalate  (EXP)
dimethylarsinic acid  (ISO)
dinophysistoxin 1  (ISO)
ethyl methanesulfonate  (ISO)
folic acid  (ISO)
formaldehyde  (ISO)
gentamycin  (EXP)
hydrogen peroxide  (ISO)
indometacin  (ISO)
L-methionine  (ISO)
Licochalcone B  (ISO)
lipopolysaccharide  (ISO)
manganese(II) chloride  (EXP)
methyl methanesulfonate  (ISO)
methylarsonic acid  (ISO)
methylisothiazolinone  (ISO)
mono(2-ethylhexyl) phthalate  (ISO)
N-methyl-4-phenylpyridinium  (EXP)
nickel atom  (ISO)
Nutlin-3  (ISO)
okadaic acid  (ISO)
paclitaxel  (ISO)
paracetamol  (EXP)
perfluorooctanoic acid  (ISO)
potassium chromate  (ISO)
progesterone  (ISO)
quercetin  (ISO)
S-(1,2-dichlorovinyl)-L-cysteine  (ISO)
silicon dioxide  (ISO)
sodium arsenate  (ISO)
sodium arsenite  (ISO)
tert-butyl hydroperoxide  (ISO)
testosterone  (EXP,ISO)
titanium dioxide  (ISO)
urethane  (ISO)
valproic acid  (ISO)
vinclozolin  (EXP)
vitamin E  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
nucleus  (IBA,IEA,ISO,ISS)

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
3. GOA pipeline RGD automated data pipeline
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:11520675   PMID:12477932   PMID:15175245   PMID:15489334   PMID:15670784   PMID:17547533   PMID:19389375   PMID:21262216   PMID:21281489  


Genomics

Comparative Map Data
Osr2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8768,372,500 - 68,380,195 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl768,373,049 - 68,380,805 (+)EnsemblGRCr8
mRatBN7.2766,487,841 - 66,495,003 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl766,487,839 - 66,495,224 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx768,376,405 - 68,383,532 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0770,579,039 - 70,586,164 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0770,446,883 - 70,454,008 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0774,047,820 - 74,055,096 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl774,047,814 - 74,055,256 (+)Ensemblrn6Rnor6.0
Rnor_5.0774,213,945 - 74,221,077 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4770,769,123 - 70,776,248 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera763,576,550 - 63,583,675 (+)NCBICelera
RGSC_v3.1770,789,852 - 70,796,977 (+)NCBI
Cytogenetic Map7q22NCBI
OSR2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38898,944,442 - 98,952,100 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl898,940,116 - 98,952,336 (+)Ensemblhg38GRCh38
GRCh37899,956,670 - 99,964,328 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 368100,025,862 - 100,033,504 (+)NCBIBuild 36Build 36hg18NCBI36
Build 348100,025,861 - 100,033,500NCBI
Celera896,142,339 - 96,150,050 (+)NCBICelera
Cytogenetic Map8q22.2NCBI
HuRef895,159,407 - 95,167,108 (+)NCBIHuRef
CHM1_1899,997,298 - 100,004,995 (+)NCBICHM1_1
T2T-CHM13v2.08100,069,165 - 100,076,821 (+)NCBIT2T-CHM13v2.0
Osr2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391535,296,244 - 35,303,451 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1535,296,244 - 35,303,451 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm381535,296,098 - 35,303,305 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1535,296,098 - 35,303,305 (+)Ensemblmm10GRCm38
MGSCv371535,225,867 - 35,233,060 (+)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv361535,240,701 - 35,247,894 (+)NCBIMGSCv36mm8
Celera1535,916,195 - 35,923,389 (+)NCBICelera
Cytogenetic Map15B3.1NCBI
cM Map1514.46NCBI
Osr2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541714,502,451 - 14,510,160 (+)Ensembl
ChiLan1.0NW_00495541714,502,450 - 14,510,015 (+)NCBIChiLan1.0ChiLan1.0
OSR2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v27116,295,551 - 116,303,223 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1891,837,037 - 91,844,694 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0895,590,753 - 95,598,491 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1897,768,980 - 97,776,663 (+)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl897,768,980 - 97,776,669 (+)EnsemblpanPan2panpan1.1
OSR2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1131,019,167 - 1,031,622 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl131,023,879 - 1,031,225 (+)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha131,014,427 - 1,026,867 (+)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.0131,171,210 - 1,183,651 (+)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl131,176,087 - 1,183,648 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1131,013,686 - 1,026,136 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0131,121,661 - 1,134,096 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0131,128,475 - 1,140,925 (+)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Osr2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440530336,598,337 - 36,606,291 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493647044,024,439 - 44,032,429 (-)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_00493647044,024,497 - 44,032,429 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
OSR2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl437,890,203 - 37,897,929 (-)EnsemblsusScr11Sscrofa11.1
Sscrofa11.1437,890,200 - 37,897,935 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2440,894,623 - 40,902,347 (-)NCBISscrofa10.2Sscrofa10.2susScr3
OSR2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1893,831,218 - 93,839,098 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl893,831,480 - 93,839,263 (+)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_02366603946,882,598 - 46,890,563 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Osr2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247636,035,953 - 6,043,437 (+)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_0046247636,035,923 - 6,043,682 (+)NCBIHetGla 1.0HetGla 1.0hetGla2
Osr2
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v11208,885,056 - 208,892,469 (+)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Osr2
66 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:212
Count of miRNA genes:142
Interacting mature miRNAs:151
Transcripts:ENSRNOT00000014879
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
7411569Bw137Body weight QTL 1370.001body mass (VT:0001259)body weight gain (CMO:0000420)72380760668807606Rat
10053722Scort27Serum corticosterone level QTL 272.410.0083blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)74511390390113903Rat
1549840Bss5Bone structure and strength QTL 59.8femur strength trait (VT:0010010)femur midshaft polar moment of inertia (CMO:0001669)72663805771638057Rat
1300127Srn1Serum renin concentration QTL 13.87blood renin amount (VT:0003349)plasma renin activity level (CMO:0000116)72417947886817926Rat
1357336Gluco6Glucose level QTL 63.4blood glucose amount (VT:0000188)serum glucose level (CMO:0000543)75170064396700643Rat
1358361Sradr5Stress Responsive Adrenal Weight QTL 55.55adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)731770293110435881Rat
1298525Cm1Cardiac mass QTL 12.7heart mass (VT:0007028)heart wet weight (CMO:0000069)756625161101625161Rat
631513Scl7Serum cholesterol level QTL 74.1blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)73984590284845902Rat
10755453Coatc12Coat color QTL 120coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)73299870277998702Rat
631504Cm27Cardiac mass QTL 273.45heart left ventricle mass (VT:0007031)heart left ventricle wet weight (CMO:0000071)746307490127866166Rat
7411605Foco14Food consumption QTL 1424.10.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)73617876481178764Rat
1300151Bp181Blood pressure QTL 1813.36arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)755498584105834451Rat
1559283Emca4Estrogen-induced mammary cancer QTL 43.7mammary gland integrity trait (VT:0010552)percentage of study population developing mammary tumors during a period of time (CMO:0000948)763889858108889858Rat
1643004Pain2Pain QTL 21mechanical nociception trait (VT:0002734)self mutilation severity score (CMO:0002145)71011291699900612Rat
738030Anxrr8Anxiety related response QTL 84.1exploratory behavior trait (VT:0010471)number of entries into a discrete space in an experimental apparatus (CMO:0000960)74847504993475049Rat
1300149Cm6Cardiac mass QTL 64.09heart mass (VT:0007028)heart left ventricle weight to body weight ratio (CMO:0000530)71104117804Rat
631534Lnnr1Liver neoplastic nodule remodeling QTL 13.850.001liver integrity trait (VT:0010547)liver remodeling tumorous lesion number to liver total tumorous lesion number ratio (CMO:0001705)73617876481178764Rat
634336Anxrr17Anxiety related response QTL 173.66locomotor behavior trait (VT:0001392)number of entries into a discrete space in an experimental apparatus (CMO:0000960)71509236116977875Rat
61357Bp38Blood pressure QTL 381.60.052arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)740540077123682549Rat
2316947Rf58Renal function QTL 587.8kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)749682832115766396Rat
1298528Bp169Blood pressure QTL 1690.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)762963207107963207Rat
1300132Bp182Blood pressure QTL 1823.49arterial blood pressure trait (VT:2000000)blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)72154197786817926Rat
1576303Ept7Estrogen-induced pituitary tumorigenesis QTL 73.7pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)763889858108889858Rat
2316955Stl24Serum triglyceride level QTL 247.1blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)749682832115766396Rat
2316952Pur22Proteinuria QTL 225.2urine protein amount (VT:0005160)urine protein level (CMO:0000591)749682832115766396Rat
2303582Gluco53Glucose level QTL 533blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)74860308793603087Rat
61439Cia8Collagen induced arthritis QTL 85.1joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)72718291472182914Rat

Markers in Region
BI289743  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2766,494,759 - 66,494,932 (+)MAPPERmRatBN7.2
Rnor_6.0774,054,703 - 74,054,875NCBIRnor6.0
Rnor_5.0774,220,834 - 74,221,006UniSTSRnor5.0
RGSC_v3.4770,776,006 - 70,776,178UniSTSRGSC3.4
Celera763,583,433 - 63,583,605UniSTS
RH 3.4 Map7640.29UniSTS
Cytogenetic Map7q22UniSTS
RH137384  
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr8768,379,941 - 68,380,123 (+)Marker Load Pipeline
mRatBN7.2766,494,749 - 66,494,930 (+)MAPPERmRatBN7.2
Rnor_6.0774,054,693 - 74,054,873NCBIRnor6.0
Rnor_5.0774,220,824 - 74,221,004UniSTSRnor5.0
RGSC_v3.4770,775,996 - 70,776,176UniSTSRGSC3.4
Celera763,583,423 - 63,583,603UniSTS
RH 3.4 Map7640.2UniSTS
Cytogenetic Map7q22UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
14 11 66 118 56 55 27 39 27 6 266 137 9 97 80 92 28 10 10

Sequence


Ensembl Acc Id: ENSRNOT00000014879   ⟹   ENSRNOP00000014879
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl768,373,049 - 68,380,805 (+)Ensembl
mRatBN7.2 Ensembl766,487,839 - 66,495,224 (+)Ensembl
Rnor_6.0 Ensembl774,047,814 - 74,055,256 (+)Ensembl
RefSeq Acc Id: NM_001012118   ⟹   NP_001012118
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8768,373,069 - 68,380,194 (+)NCBI
mRatBN7.2766,487,877 - 66,495,002 (+)NCBI
Rnor_6.0774,047,820 - 74,054,945 (+)NCBI
Rnor_5.0774,213,945 - 74,221,077 (+)NCBI
RGSC_v3.4770,769,123 - 70,776,248 (+)RGD
Celera763,576,550 - 63,583,675 (+)RGD
Sequence:
RefSeq Acc Id: XM_017594862   ⟹   XP_017450351
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8768,372,500 - 68,380,195 (+)NCBI
mRatBN7.2766,487,841 - 66,495,003 (+)NCBI
Rnor_6.0774,051,958 - 74,055,096 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001012118 (Get FASTA)   NCBI Sequence Viewer  
  NP_001421603 (Get FASTA)   NCBI Sequence Viewer  
  XP_017450351 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAH79211 (Get FASTA)   NCBI Sequence Viewer  
  EDM16410 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000014879
  ENSRNOP00000014879.4
GenBank Protein Q6AY34 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_001012118   ⟸   NM_001012118
- UniProtKB: Q6AY34 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_017450351   ⟸   XM_017594862
- Peptide Label: isoform X1
- Sequence:
Ensembl Acc Id: ENSRNOP00000014879   ⟸   ENSRNOT00000014879
Protein Domains
C2H2-type

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q6AY34-F1-model_v2 AlphaFold Q6AY34 1-276 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13695287
Promoter ID:EPDNEW_R5812
Type:single initiation site
Name:Osr2_1
Description:odd-skipped related transciption factor 2
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0774,047,800 - 74,047,860EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1305812 AgrOrtholog
BioCyc Gene G2FUF-33666 BioCyc
Ensembl Genes ENSRNOG00000011136 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSRNOT00000014879 ENTREZGENE
  ENSRNOT00000014879.7 UniProtKB/Swiss-Prot
Gene3D-CATH Classic Zinc Finger UniProtKB/Swiss-Prot
IMAGE_CLONE IMAGE:7131819 IMAGE-MGC_LOAD
InterPro C2H2-ZF_Transcription_Reg UniProtKB/Swiss-Prot
  Znf_C2H2_sf UniProtKB/Swiss-Prot
  Znf_C2H2_type UniProtKB/Swiss-Prot
KEGG Report rno:315039 UniProtKB/Swiss-Prot
MGC_CLONE MGC:94273 IMAGE-MGC_LOAD
NCBI Gene 315039 ENTREZGENE
PANTHER ODD-SKIPPED - RELATED UniProtKB/Swiss-Prot
  PROTEIN ODD-SKIPPED-RELATED 2 UniProtKB/Swiss-Prot
Pfam zf-C2H2 UniProtKB/Swiss-Prot
PhenoGen Osr2 PhenoGen
PROSITE ZINC_FINGER_C2H2_1 UniProtKB/Swiss-Prot
  ZINC_FINGER_C2H2_2 UniProtKB/Swiss-Prot
RatGTEx ENSRNOG00000011136 RatGTEx
SMART ZnF_C2H2 UniProtKB/Swiss-Prot
Superfamily-SCOP SSF57667 UniProtKB/Swiss-Prot
UniProt A6HR12 ENTREZGENE, UniProtKB/TrEMBL
  OSR2_RAT UniProtKB/Swiss-Prot, ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2025-01-24 Osr2  odd-skipped related transcription factor 2  Osr2  odd-skipped related transciption factor 2  Name changed 629549 APPROVED
2013-11-19 Osr2  odd-skipped related transciption factor 2  Osr2  odd-skipped related 2 (Drosophila)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2005-12-06 Osr2  odd-skipped related 2 (Drosophila)  Osr2_predicted  odd-skipped related 2 (Drosophila) (predicted)  Symbol and Name updated 1559027 APPROVED
2005-01-12 Osr2_predicted  odd-skipped related 2 (Drosophila) (predicted)      Symbol and Name status set to approved 70820 APPROVED