Naa25 (N(alpha)-acetyltransferase 25, NatB auxiliary subunit) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Behavioral & Substance Use Disorder Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)
Gene: Naa25 (N(alpha)-acetyltransferase 25, NatB auxiliary subunit) Rattus norvegicus
Analyze
Symbol: Naa25
Name: N(alpha)-acetyltransferase 25, NatB auxiliary subunit
RGD ID: 1305685
Description: Predicted to enable acetyltransferase activator activity. Predicted to be involved in cytoskeleton organization. Located in cytoplasm. Orthologous to human NAA25 (N-alpha-acetyltransferase 25, NatB auxiliary subunit); INTERACTS WITH (+)-schisandrin B; 2,2',4,4'-Tetrabromodiphenyl ether; 6-propyl-2-thiouracil.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: liver regeneration-related protein LRRGT00164; LOC360811; LRRGT00164; Mdm20; mitochondrial distribution and morphology protein 20; N-alpha-acetyltransferase 25, NatB auxiliary subunit; N-terminal acetyltransferase B complex subunit MDM20; N-terminal acetyltransferase B complex subunit NAA25; natB complex subunit MDM20; RGD1305685; similar to hypothetical protein FLJ13089
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81240,758,909 - 40,811,192 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1240,758,728 - 40,811,291 (-)EnsemblGRCr8
mRatBN7.21235,098,256 - 35,150,498 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1235,098,075 - 35,150,467 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1236,271,007 - 36,323,315 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01236,882,214 - 36,934,524 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01235,934,653 - 35,986,962 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01240,628,005 - 40,680,421 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1240,628,005 - 40,680,397 (-)Ensemblrn6Rnor6.0
Rnor_5.01242,495,120 - 42,547,564 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41236,233,484 - 36,286,678 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1236,762,841 - 36,815,235 (-)NCBICelera
RGSC_v3.11236,096,871 - 36,150,066 (-)NCBI
Cytogenetic Map12q16NCBI
JBrowse:




Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
cytoplasm  (IBA,IDA,IEA,ISO)
cytosol  (IEA,ISO)
NatB complex  (IBA)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Spatio-temporal expression pattern of the NatB complex, Nat5/Mdm20 in the developing mouse brain: implications for co-operative versus non-co-operative actions of Mdm20 and Nat5. Ohyama K, etal., Gene Expr Patterns. 2012 Jan-Feb;12(1-2):36-45. doi: 10.1016/j.gep.2011.11.001. Epub 2011 Nov 10.
3. GOA pipeline RGD automated data pipeline
4. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
5. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:24358196  


Genomics

Comparative Map Data
Naa25
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81240,758,909 - 40,811,192 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1240,758,728 - 40,811,291 (-)EnsemblGRCr8
mRatBN7.21235,098,256 - 35,150,498 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1235,098,075 - 35,150,467 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1236,271,007 - 36,323,315 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01236,882,214 - 36,934,524 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01235,934,653 - 35,986,962 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01240,628,005 - 40,680,421 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1240,628,005 - 40,680,397 (-)Ensemblrn6Rnor6.0
Rnor_5.01242,495,120 - 42,547,564 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41236,233,484 - 36,286,678 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1236,762,841 - 36,815,235 (-)NCBICelera
RGSC_v3.11236,096,871 - 36,150,066 (-)NCBI
Cytogenetic Map12q16NCBI
NAA25
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3812112,026,689 - 112,108,783 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl12112,026,689 - 112,109,434 (-)Ensemblhg38GRCh38
GRCh3712112,464,493 - 112,546,587 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 3612110,948,876 - 111,030,980 (-)NCBIBuild 36Build 36hg18NCBI36
Celera12112,089,963 - 112,172,115 (-)NCBICelera
Cytogenetic Map12q24.13NCBI
HuRef12109,477,779 - 109,559,771 (-)NCBIHuRef
CHM1_112112,432,742 - 112,514,869 (-)NCBICHM1_1
T2T-CHM13v2.012112,003,594 - 112,085,687 (-)NCBIT2T-CHM13v2.0
Naa25
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm395121,535,977 - 121,580,612 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl5121,535,999 - 121,582,441 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm385121,397,914 - 121,442,549 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl5121,397,936 - 121,444,378 (+)Ensemblmm10GRCm38
MGSCv375121,847,991 - 121,890,122 (+)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv365121,658,599 - 121,700,730 (+)NCBIMGSCv36mm8
Celera5118,487,719 - 118,529,976 (+)NCBICelera
Cytogenetic Map5FNCBI
cM Map561.79NCBI
Naa25
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554828,583,802 - 8,660,501 (-)Ensembl
ChiLan1.0NW_0049554828,583,802 - 8,659,626 (-)NCBIChiLan1.0ChiLan1.0
NAA25
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v210120,117,990 - 120,200,807 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan112120,114,384 - 120,197,200 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v012109,623,532 - 109,706,094 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.112113,017,371 - 113,101,415 (-)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl12113,020,213 - 113,100,935 (-)EnsemblpanPan2panpan1.1
NAA25
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1269,620,812 - 9,699,671 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl269,623,575 - 9,699,139 (-)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha269,739,399 - 9,818,044 (-)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.0269,858,552 - 9,937,149 (-)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl269,858,851 - 9,937,091 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1269,835,630 - 9,914,223 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0269,899,033 - 9,977,629 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0269,946,410 - 10,025,029 (-)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Naa25
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118154,865,496 - 154,940,195 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365584,539,042 - 4,613,925 (-)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049365584,541,097 - 4,613,923 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
NAA25
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1439,606,882 - 39,682,470 (+)EnsemblsusScr11Sscrofa11.1
Sscrofa11.11439,606,799 - 39,682,787 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21442,103,192 - 42,174,847 (+)NCBISscrofa10.2Sscrofa10.2susScr3
NAA25
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.111107,258,813 - 107,345,333 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl11107,258,810 - 107,345,714 (-)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_023666037137,745,973 - 137,829,697 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Naa25
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462474720,082,907 - 20,160,107 (+)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_00462474720,082,870 - 20,159,488 (+)NCBIHetGla 1.0HetGla 1.0hetGla2
Naa25
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v11632,366,270 - 32,418,189 (-)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Naa25
530 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:33
Count of miRNA genes:29
Interacting mature miRNAs:31
Transcripts:ENSRNOT00000048984
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
631560Apr1Acute phase response QTL 16.1orosomucoid 1 amount (VT:0010541)plasma orosomucoid 1 level (CMO:0001467)122480502252308831Rat
70213Niddm27Non-insulin dependent diabetes mellitus QTL 273.72blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)121120049452308831Rat
8552964Pigfal17Plasma insulin-like growth factor 1 level QTL 173.5blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)121120049452308831Rat
8693635Alc28Alcohol consumption QTL 282.70.439drinking behavior trait (VT:0001422)calculated ethanol drink intake rate (CMO:0001615)122871771850386405Rat
7411641Foco19Food consumption QTL 1927.70.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)121120049452308831Rat
7411643Foco20Food consumption QTL 200.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)122598935552308831Rat
5684888Pia42Pristane induced arthritis QTL 42joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)12348941648489416Rat
1300162Bp188Blood pressure QTL 1883.19arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)123776414551558799Rat
1641928Alcrsp5Alcohol response QTL 5response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)121847304152308831Rat
1549829Scl48Serum cholesterol level QTL 485blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)121526424852308831Rat
8552912Pigfal6Plasma insulin-like growth factor 1 level QTL 65blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)121120049752308831Rat
10059594Kidm46Kidney mass QTL 463.790.025kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)121174352852308831Rat
8552918Pigfal7Plasma insulin-like growth factor 1 level QTL 7blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)121120049452308831Rat
70169Eae13Experimental allergic encephalomyelitis QTL 130.032nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis incidence/prevalence measurement (CMO:0001046)122977552242298555Rat
1600386Calcic2Intracellular calcium level QTL 20.001platelet physiology trait (VT:0005464)platelet intracellular calcium level (CMO:0000922)123370043246784661Rat
1300175Cm5Cardiac mass QTL 53.78heart mass (VT:0007028)heart left ventricle weight to body weight ratio (CMO:0000530)123370043251558799Rat
1556747Calcic1Intracellular calcium level QTL 13.6platelet calcium amount (VT:0010500)platelet intracellular calcium level (CMO:0000922)123370043246784661Rat
631829Alc6Alcohol consumption QTL 64.7consumption behavior trait (VT:0002069)ethanol drink intake rate (CMO:0001407)123424347543352593Rat
61404Bw120Body weight QTL 1205.1body mass (VT:0001259)body mass index (BMI) (CMO:0000105)121746497946784661Rat
1331786Kidm11Kidney mass QTL 113.571kidney mass (VT:0002707)right kidney wet weight (CMO:0000082)121618743852308831Rat
8693658Alc33Alcohol consumption QTL 332.10.68drinking behavior trait (VT:0001422)calculated ethanol drink intake rate (CMO:0001615)122871771849212240Rat
2293699Bss49Bone structure and strength QTL 495.610.0001lumbar vertebra size trait (VT:0010518)lumbar vertebra trabecular cross-sectional area (CMO:0001692)121613502952308831Rat
1331761Bp218Blood pressure QTL 2182.973arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)121618743851213550Rat
1331763Wbc2White blood cell count QTL 23.162leukocyte quantity (VT:0000217)total white blood cell count (CMO:0000365)121120049452308831Rat
7411547Bw129Body weight QTL 1290.001body mass (VT:0001259)body weight gain (CMO:0000420)61120049452308831Rat
7387292Kidm42Kidney mass QTL 423.030.0004kidney mass (VT:0002707)left kidney wet weight (CMO:0000083)12141361854Rat
2303569Gluco44Glucose level QTL 442blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)121847304152308831Rat
1298081Cia25Collagen induced arthritis QTL 254.7joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)12274769447747694Rat
2303575Insul14Insulin level QTL 144blood insulin amount (VT:0001560)blood insulin level (CMO:0000349)12308718048087180Rat
7411588Foco6Food consumption QTL 60.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)121120049452308831Rat
7243862Mcs30Mammary carcinoma susceptibility QTL 308.62mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)12563330650633306Rat
2300186Bmd59Bone mineral density QTL 597.10.0001lumbar vertebra mineral mass (VT:0010511)volumetric bone mineral density (CMO:0001553)121613502952308831Rat
7411597Foco10Food consumption QTL 100.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)121120049452308831Rat

Markers in Region
RH140786  
Rat AssemblyChrPosition (strand)SourceJBrowse
RH 3.4 Map12619.5UniSTS
Cytogenetic Map12q16UniSTS
AA945300  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21235,098,324 - 35,098,526 (+)MAPPERmRatBN7.2
Rnor_6.01240,628,255 - 40,628,456NCBIRnor6.0
Rnor_5.01242,495,370 - 42,495,571UniSTSRnor5.0
RGSC_v3.41236,233,734 - 36,233,935UniSTSRGSC3.4
Celera1236,763,091 - 36,763,292UniSTS
RH 3.4 Map12610.1UniSTS
Cytogenetic Map12q16UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 67 162 91 90 59 92 59 6 356 192 11 141 81 92 31 17 17

Sequence


Ensembl Acc Id: ENSRNOT00000048984   ⟹   ENSRNOP00000049175
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1240,758,728 - 40,811,145 (-)Ensembl
mRatBN7.2 Ensembl1235,098,075 - 35,150,467 (-)Ensembl
Rnor_6.0 Ensembl1240,628,005 - 40,680,374 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000080418   ⟹   ENSRNOP00000075085
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1240,758,909 - 40,811,291 (-)Ensembl
mRatBN7.2 Ensembl1235,098,763 - 35,150,467 (-)Ensembl
Rnor_6.0 Ensembl1240,630,817 - 40,680,397 (-)Ensembl
RefSeq Acc Id: NM_001413582   ⟹   NP_001400511
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81240,758,909 - 40,811,145 (-)NCBI
mRatBN7.21235,098,256 - 35,150,498 (-)NCBI
RefSeq Acc Id: XM_039089597   ⟹   XP_038945525
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81240,774,152 - 40,811,191 (-)NCBI
mRatBN7.21235,113,499 - 35,150,478 (-)NCBI
RefSeq Acc Id: XM_039089598   ⟹   XP_038945526
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81240,775,248 - 40,811,192 (-)NCBI
mRatBN7.21235,114,595 - 35,150,478 (-)NCBI
RefSeq Acc Id: XM_063271535   ⟹   XP_063127605
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81240,762,196 - 40,811,190 (-)NCBI
RefSeq Acc Id: XR_005491649
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81240,774,154 - 40,811,191 (-)NCBI
mRatBN7.21235,113,500 - 35,150,478 (-)NCBI
Ensembl Acc Id: ENSRNOP00000075085   ⟸   ENSRNOT00000080418
Ensembl Acc Id: ENSRNOP00000049175   ⟸   ENSRNOT00000048984
RefSeq Acc Id: XP_038945525   ⟸   XM_039089597
- Peptide Label: isoform X2
- UniProtKB: A6J1F2 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038945526   ⟸   XM_039089598
- Peptide Label: isoform X2
- UniProtKB: A6J1F2 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001400511   ⟸   NM_001413582
- UniProtKB: Q6QI44 (UniProtKB/Swiss-Prot),   A0A0G2K9Q3 (UniProtKB/TrEMBL),   A6J1F1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063127605   ⟸   XM_063271535
- Peptide Label: isoform X1
- UniProtKB: Q6QI44 (UniProtKB/Swiss-Prot)

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q6QI44-F1-model_v2 AlphaFold Q6QI44 1-970 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13698656
Promoter ID:EPDNEW_R9181
Type:initiation region
Name:Naa25_1
Description:N-acetyltransferase 25, NatB auxiliary subunit
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01240,680,380 - 40,680,440EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1305685 AgrOrtholog
BioCyc Gene G2FUF-19208 BioCyc
Ensembl Genes ENSRNOG00000001350 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSRNOT00000048984 ENTREZGENE
  ENSRNOT00000048984.3 UniProtKB/Swiss-Prot
  ENSRNOT00000080418 ENTREZGENE
Gene3D-CATH 1.25.40.1040 UniProtKB/Swiss-Prot
InterPro N-acetylTrfase_B_cplx_non-cat UniProtKB/Swiss-Prot
  TPR-like_helical_dom_sf UniProtKB/Swiss-Prot
NCBI Gene 360811 ENTREZGENE
PANTHER N-TERMINAL ACETYLTRANSFERASE-RELATED UniProtKB/Swiss-Prot
  PTHR22767:SF3 UniProtKB/Swiss-Prot
Pfam NatB_MDM20 UniProtKB/Swiss-Prot
PhenoGen Naa25 PhenoGen
PROSITE TPR_REGION UniProtKB/Swiss-Prot
RatGTEx ENSRNOG00000001350 RatGTEx
Superfamily-SCOP SSF48452 UniProtKB/Swiss-Prot
UniProt A0A0G2K9Q3 ENTREZGENE, UniProtKB/TrEMBL
  A6J1F1 ENTREZGENE, UniProtKB/TrEMBL
  A6J1F2 ENTREZGENE, UniProtKB/TrEMBL
  NAA25_RAT UniProtKB/Swiss-Prot, ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2010-04-23 Naa25  N(alpha)-acetyltransferase 25, NatB auxiliary subunit  RGD1305685  similar to hypothetical protein FLJ13089  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2005-12-06 RGD1305685  similar to hypothetical protein FLJ13089  RGD1305685_predicted  similar to hypothetical protein FLJ13089 (predicted)  Symbol and Name updated 1559027 APPROVED
2005-01-20 RGD1305685_predicted  similar to hypothetical protein FLJ13089 (predicted)  LOC360811_predicted    Symbol and Name status set to approved 1331353 APPROVED
2005-01-12 LOC360811_predicted  similar to hypothetical protein FLJ13089 (predicted)      Symbol and Name status set to provisional 70820 PROVISIONAL