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Gene: Bicral (BICRA like chromatin remodeling complex associated protein) Rattus norvegicus

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Symbol:

Bicral

Name:

BICRA like chromatin remodeling complex associated protein

RGD ID:

1305680

Description:

Predicted to be involved in positive regulation of DNA-templated transcription. Predicted to be part of SWI/SNF complex. Orthologous to human BICRAL (BICRA like chromatin remodeling complex associated protein); INTERACTS WITH 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine; acetamide.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

BRD4 interacting chromatin remodeling complex associated protein like; BRD4 interacting chromatin remodelling complex associated protein like; BRD4-interacting chromatin-remodeling complex-associated protein-like; GLTSCR1-like; Gltscr1l; hypothetical protein LOC301235; LOC102555718; LOC301235; RGD1305680; similar to KIAA0240; uncharacterized LOC102555718; uncharacterized protein LOC301235

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	9	21,597,886 - 21,682,985 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	9	21,597,855 - 21,682,983 (+)	Ensembl				GRCr8
mRatBN7.2	9	14,100,253 - 14,185,368 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	9	14,154,209 - 14,183,671 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	9	22,736,059 - 22,765,623 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	9	27,799,500 - 27,829,255 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	9	26,099,428 - 26,128,995 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	9	16,406,577 - 16,495,751 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	9	16,302,578 - 16,494,054 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	9	15,369,213 - 15,403,045 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	9	9,349,439 - 9,379,804 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	9	11,902,331 - 11,931,773 (+)	NCBI		Celera
RGSC_v3.1	9	9,346,890 - 9,375,934 (+)	NCBI
Cytogenetic Map	9	q12	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

autism spectrum disorder (ISO)

prostate cancer (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dichloroethane (ISO)

17beta-estradiol (EXP)

2,3,7,8-tetrachlorodibenzodioxine (EXP)

3-isobutyl-1-methyl-7H-xanthine (ISO)

4,4'-sulfonyldiphenol (ISO)

acetamide (EXP)

aflatoxin B1 (ISO)

amitrole (EXP)

aristolochic acid A (ISO)

arsane (ISO)

arsenic atom (ISO)

arsenite(3-) (ISO)

atrazine (ISO)

benzo[a]pyrene (ISO)

benzo[e]pyrene (ISO)

bisphenol A (EXP,ISO)

bisphenol F (ISO)

butanal (ISO)

caffeine (ISO)

carbamazepine (ISO)

carbon nanotube (ISO)

cisplatin (ISO)

dexamethasone (ISO)

Dibutyl phosphate (ISO)

dicrotophos (ISO)

dorsomorphin (ISO)

fenthion (ISO)

FR900359 (ISO)

fulvestrant (ISO)

gentamycin (EXP)

glycidol (EXP)

indometacin (ISO)

iron dichloride (ISO)

leflunomide (ISO)

maneb (ISO)

methapyrilene (ISO)

paracetamol (EXP,ISO)

paraquat (ISO)

pentachlorophenol (ISO)

phenobarbital (ISO)

phenylmercury acetate (ISO)

resveratrol (ISO)

SB 431542 (ISO)

silicon dioxide (ISO)

sodium arsenate (ISO)

sodium arsenite (ISO)

sunitinib (ISO)

thioacetamide (EXP)

troglitazone (ISO)

tungsten (ISO)

valproic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

positive regulation of DNA-templated transcription (IBA)

Cellular Component

SWI/SNF complex (IBA,ISO)

Molecular Function

protein binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
3.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:12477932	PMID:29374058

Genomics

Comparative Map Data

Bicral
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	9	21,597,886 - 21,682,985 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	9	21,597,855 - 21,682,983 (+)	Ensembl				GRCr8
mRatBN7.2	9	14,100,253 - 14,185,368 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	9	14,154,209 - 14,183,671 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	9	22,736,059 - 22,765,623 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	9	27,799,500 - 27,829,255 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	9	26,099,428 - 26,128,995 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	9	16,406,577 - 16,495,751 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	9	16,302,578 - 16,494,054 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	9	15,369,213 - 15,403,045 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	9	9,349,439 - 9,379,804 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	9	11,902,331 - 11,931,773 (+)	NCBI		Celera
RGSC_v3.1	9	9,346,890 - 9,375,934 (+)	NCBI
Cytogenetic Map	9	q12	NCBI

BICRAL
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	6	42,746,339 - 42,868,556 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	6	42,781,931 - 42,868,560 (+)	Ensembl			hg38	GRCh38
GRCh37	6	42,714,725 - 42,836,294 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	6	42,896,772 - 42,944,274 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Celera	6	44,341,061 - 44,388,560 (+)	NCBI		Celera
Cytogenetic Map	6	p21.1	NCBI
HuRef	6	42,506,828 - 42,553,996 (+)	NCBI		HuRef
CHM1_1	6	42,791,270 - 42,838,765 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	6	42,575,724 - 42,697,274 (+)	NCBI		T2T-CHM13v2.0

Bicral
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	17	47,109,046 - 47,201,329 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	17	47,109,046 - 47,169,408 (-)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	17	46,798,116 - 46,890,442 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	17	46,798,120 - 46,858,482 (-)	Ensembl			mm10	GRCm38
MGSCv37	17	46,935,065 - 46,968,362 (-)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	17	46,261,307 - 46,351,027 (-)	NCBI		MGSCv36	mm8
Celera	17	50,234,333 - 50,267,695 (-)	NCBI		Celera
Cytogenetic Map	17	C	NCBI
cM Map	17	22.9	NCBI

Bicral
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955437	8,854,563 - 8,897,684 (+)	Ensembl
ChiLan1.0	NW_004955437	8,841,830 - 8,896,391 (+)	NCBI	ChiLan1.0	ChiLan1.0

BICRAL
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	5	57,244,633 - 57,365,860 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	6	53,114,629 - 53,235,867 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	6	42,338,441 - 42,457,989 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	6	43,695,490 - 43,753,013 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	6	43,695,491 - 43,756,892 (+)	Ensembl			panPan2	panpan1.1

BICRAL
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	12	11,358,790 - 11,436,002 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	12	11,358,650 - 11,435,112 (+)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	12	11,386,001 - 11,465,323 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	12	11,840,378 - 11,919,715 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	12	11,840,351 - 11,919,558 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	12	11,368,304 - 11,447,607 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	12	11,452,731 - 11,531,917 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	12	11,546,642 - 11,625,934 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Bicral
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404946	46,843,637 - 46,922,609 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936476	17,040,595 - 17,081,141 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936476	17,037,595 - 17,111,786 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

BICRAL
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	7	37,824,242 - 37,933,593 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	7	37,852,153 - 37,933,599 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	7	43,329,942 - 43,381,970 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

BICRAL
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	17	29,283,287 - 29,402,201 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	17	29,283,150 - 29,331,259 (-)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666044	42,782,889 - 42,905,000 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Bicral
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624754	16,578,918 - 16,619,993 (-)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624754	16,578,801 - 16,621,225 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Bicral
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	4	82,983,026 - 83,067,958 (+)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Bicral
678 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	464
Count of miRNA genes:	227
Interacting mature miRNAs:	276
Transcripts:	ENSRNOT00000021762
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
2303170	Bp332	Blood pressure QTL 332	3.73	0.027	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	9	6714888	84474983	Rat
631211	Bw4	Body weight QTL4	5.31		retroperitoneal fat pad mass (VT:0010430)	retroperitoneal fat pad weight to body weight ratio (CMO:0000635)	9	5346479	50346479	Rat
10054141	Gmadr4	Adrenal mass QTL 4	2.45	0.0074	adrenal gland mass (VT:0010420)	both adrenal glands wet weight (CMO:0000164)	9	1	21707400	Rat
2303559	Gluco54	Glucose level QTL 54	2		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	9	8750492	53750492	Rat
7207814	Bmd91	Bone mineral density QTL 91	3.5		femur size trait (VT:1000369)	femoral neck cross-sectional area (CMO:0001697)	9	1	31250552	Rat
9589055	Scfw5	Subcutaneous fat weight QTL 5	5.55	0.001	subcutaneous adipose mass (VT:1000472)	abdominal subcutaneous fat pad weight (CMO:0002069)	9	496645	45496645	Rat
1641911	Alcrsp13	Alcohol response QTL 13			response to alcohol trait (VT:0010489)	brain neurotensin receptor 1 density (CMO:0002068)	9	6214995	51214995	Rat
1354650	Despr5	Despair related QTL 5	4.01	0.0017	locomotor behavior trait (VT:0001392)	amount of time spent in voluntary immobility (CMO:0001043)	9	8750492	53750492	Rat
1300124	Cm4	Cardiac mass QTL 4	3.55		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	9	1	41763315	Rat
61425	Cia15	Collagen induced arthritis QTL 15	4.6		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	9	5346479	50416711	Rat
631643	Bp120	Blood pressure QTL 120	3	0.004	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	9	6714888	29567695	Rat
9589158	Gluco65	Glucose level QTL 65	6.82	0.001	blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	9	496645	45496645	Rat
1600365	Mcs20	Mammary carcinoma susceptibility QTL 20	3		mammary gland integrity trait (VT:0010552)	mammary tumor growth rate (CMO:0000344)	9	21031430	49025574	Rat
7411592	Foco8	Food consumption QTL 8	7.4	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	9	496645	45496645	Rat
1298088	Edpm11	Estrogen-dependent pituitary mass QTL 11	2.5		pituitary gland mass (VT:0010496)	pituitary gland wet weight (CMO:0000853)	9	6214995	51214995	Rat

Markers in Region

BF388008

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	9	14,168,061 - 14,168,216 (+)	MAPPER	mRatBN7.2
Rnor_6.0	9	16,478,445 - 16,478,599	NCBI	Rnor6.0
Rnor_5.0	9	15,385,739 - 15,385,893	UniSTS	Rnor5.0
RGSC_v3.4	9	9,363,292 - 9,363,446	UniSTS	RGSC3.4
Celera	9	11,916,184 - 11,916,338	UniSTS
RH 3.4 Map	9	58.4	UniSTS
Cytogenetic Map	9	q12	UniSTS

BF388526

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	9	14,152,882 - 14,153,060 (+)	MAPPER	mRatBN7.2
Rnor_6.0	9	16,463,097 - 16,463,274	NCBI	Rnor6.0
Rnor_6.0	9	16,301,252 - 16,301,429	NCBI	Rnor6.0
Rnor_5.0	9	15,370,391 - 15,370,568	UniSTS	Rnor5.0
Rnor_5.0	9	15,216,749 - 15,216,926	UniSTS	Rnor5.0
RGSC_v3.4	9	9,348,113 - 9,348,290	UniSTS	RGSC3.4
Celera	9	11,901,005 - 11,901,182	UniSTS
RH 3.4 Map	3	1498.8	UniSTS
Cytogenetic Map	9	q12	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	165	91	90	59	92	59	6	356	192	11	144	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001106888	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001437649	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006244508	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008766846	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008766847	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017596326	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039083177	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039083178	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063266846	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063266847	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	BC088348	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473987	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ213043	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000009	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000021762 ⟹ ENSRNOP00000021762

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	9	21,650,969 - 21,680,463 (+)	Ensembl
mRatBN7.2 Ensembl	9	14,154,209 - 14,183,671 (+)	Ensembl
Rnor_6.0 Ensembl	9	16,302,578 - 16,494,054 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000091809 ⟹ ENSRNOP00000071303

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	9	21,597,855 - 21,682,982 (+)	Ensembl
mRatBN7.2 Ensembl	9	14,154,925 - 14,183,671 (+)	Ensembl
Rnor_6.0 Ensembl	9	16,427,589 - 16,493,490 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000121052 ⟹ ENSRNOP00000098604

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	9	21,597,855 - 21,682,982 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000121053 ⟹ ENSRNOP00000098605

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	9	21,652,675 - 21,682,983 (+)	Ensembl

RefSeq Acc Id:

NM_001106888 ⟹ NP_001100358

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	21,651,828 - 21,681,288 (+)	NCBI
mRatBN7.2	9	14,154,209 - 14,183,671 (+)	NCBI
Rnor_6.0	9	16,464,423 - 16,494,054 (+)	NCBI
Rnor_5.0	9	15,369,213 - 15,403,045 (+)	NCBI
RGSC_v3.4	9	9,349,439 - 9,379,804 (+)	RGD
Celera	9	11,902,331 - 11,931,773 (+)	RGD

Sequence:

show sequence

TTATTCCACGCATGGCTTGAAATGGGTGAGAAGCAGGGTTGCCAGGTGTCGATCACTAGTTTGT
CATGGATGATGACGATGACTCCTGTCTCCTCGATCTTATTGGAGACCCACAAGCATTGAACTAT
TTTCTGCACGGACCTAGCAGTAAATCGAGCGGCGATGACGTGACGAACGCAGGGTATTCTGCAG
CCAATTCTAATTCAATTTTCGCCAACTCCACGAACGCTGACCCTAAGTCATCCCTCAAAGGTGT
AAGTAACCAGCTCGGAGAAGGGCCCAGTGACGGGCTGCCGCTTGCAAGCAGCCTTCAGTTTCTT
GAAGATGAACTTGAGTCTTCTCCTCTCCCTGATCTCAGTGAGGACCAACCCTTTGACATTCTTC
AGAAATCCTTGCAGGAGGCTAATATCACTGAACAGACGCTGGCAGAAGAGGCATATCTGGATGC
CAGTATAGGCTCGAGCCAACAGTTTGCACAAGCCCAGCTTCATCCTTCTTCATCAGCATCCTTT
ACTCAGGCTTCTAATGTTTCTAATTACTCAGGTCAGACACTGCAGCCTATCGGGGTGACTCACG
TGCCTGTCGGAGCATCGTTTGCAAGCAATACAGTGGGTGTACAGCATGGCTTTATGCAACACGT
GGGGATCAGTGTTCCCAGCCAGCATTTGCCCAATAGCAGCCAGATCAGTGGCTCCGGTCAGATT
CAGTTAATCGGGTCCTTTGGTAATCAGCCTTCCATGATGACTATTAATAACCTAGATGGCTCTC
AAATCATATTGAAAGGCAGTGGGCAGCAAGCCCCGTCCAGTGTGAGTGGGGGGCTTCTGGTTCA
CAGACAGACTCCTAACGGCAACTCTTTGTTTGGGAACCCCACTTCCAGCCCCGGAGCACAGCCT
GTCACCGTCCCATTTAACAGCACAAATTTTCAAGCATCTCTACCTGTGCATAACATCATTATTC
AAAGGGGTCTCGCACCAAATTCAAATAAAGTCCCAATTAATATCCAGCCAAAGCCGATCCAGAT
GGGTCAGCAGAGTACATACAATGTGAACAGCCTTGGACTCCAGCAGCACCACGTCCAGCAAGGG
ATCTCCTTCGCCTCTGCAAGCTCGCCCCAGGGCTCCGTGGTTGGTCCACACATGTCTGTGAACA
TTGTCAACCAACAGAACGCGAGGAAGCCTGTCACCTCACAGGCGGTGAGCAGCGCAGGGGGCAG
CATTGTTATTCACTCCCCCATGGGCCAGCCTCACACACCCCAAAGTCAGTTCCTTATACCCACA
AGCCTTTCTGTCAGCTCCAACTCGGTCCACCATGTCCAGACTATAAATGGGCAACTTGTTCAGA
CTCAGCCCTCCCAGCTCATCTCTGGCCAAGTGGCCTCAGAGCATGTCATGTTGAATAGGAATTC
TTCTAACATGCTCAGGACCAACCAACCATATGCCGGACAGATGCTCAACAACCAGAGTGCCGCT
GTCCAGCTGGTGTCTGGGCAGACTTTTGCCACCTCTGGAAGCCCAGTGATCGTCAACCATGCCT
CTCCTCAGATCGTGGGAGGACAGATGCCCTTGCAGCAGGCCTCACCAACTGTGCTACACCTGTC
GCCTGGGCAGAGCAGTGTTTCCCAAGGAAGGCCAGGCTTCGCCACCATGGCCTCGGTGAGCAGC
ATGTCAGGACCTGCTCGGTTCCCCGCCGTCAGCTCAGCTAGTACTGCCCACCCTACTCTTGGGC
CTGCAGTACAGTCTGGGGCATCAGGATCAAACTTTACGGGAGACCAGCTGACACAGGCAAACAG
AACTCCGGTACCCGTCAGTGTGTCCCACCGTCTTCCAGTCTCTGCTTCCAAATCTCCCAGCACC
TTGAGCAGCACCCCGGGGACTCAGCAGCAGTTCTTCTGTCAGGCTCCGAAGAAGTGTTTGAACC
AGACCGCCCCCATTCCCACCCCCATTCCCACGTCCAAGACCACAGACAGCCTGCGGCAACCACA
GATCCCTGGGCTCTTGAGCACAGCACTGCCAGGACAGGATTGTGGAAGCAAAATTATGCCAGCA
CCCTTGGGGACCACACAGCCACAGCAGGAAAACTCAGTTGGATCTTCCCCGAGCCAGACAGCCG
TGCAGGTGGACAGTCATTCAGGACAGAAGAGGCCTGCTGCCAAACAGCTGACTAAAGGAGCTTT
CATCCTCCAGCAGTTACAGAGGGACCAAGCCCATGCTGTGACACCCGACAAAAGCCAGTTCCGA
TCACTGACTGACACCGTGCAGAGACTGCTCTCCTACCACGTGTGCCAAGGCTCCATGCCCACGG
AGGAAGACCTGAGCAAAGTGGACAGTGAATTTGAAGAAGTCGCCACTCAGCTCCTCAAAAGGAC
CCACGCTATGCTGAACAAATACAGATCCCTGCTCCTCGAAGACGCCATGAGGATCAACCCCTCT
GCAGAGATGGTGATGATTGATAGGATGTTCAACCAGGAGGAAAGAGCTTCCCTGTCACGGGACA
AGCGTCTGGCGCTCGTAGATCCTGAGGGTTTTCAGGCCGATTTCTGTTGTTCCTTTAAACTTGA
CGAAGCTGCACCTGAGACACCGCTTGACAGGAGTGACCAGCATCGCAGCAAAACCAGCTCGCTC
CATCAGGTGCCCAGGGCCCAAAGCAGAGACCGAGCCAAGCCAGGCGTGGCAGAAGCAACGAATC
ATGACCAGTTTCATCTAGTGCCTAACCACATAGTGGTCTCTGCAGAGGGAAACATTTCTAAAAA
GTCAGAAGGCCACAGTAGAACACTGAAATTTGACAAAGGGGTCTTAGGCCAATACCGGGGTCCG
CCTGAGGACAAGGGCGGCCGGAGGGACCCTGCCAAGGCCAGCGGGTGCTCTCCAGGCCCTGAAG
GCCACCGCAAAACTTTGCCCAGGCCAGACCATGGCTCTGAGAGCAAGCTCCCGGGTATCCTGGC
CAGCTCGCACATGGAGATGCCGTGCCTCGACTCCTTCCAGGACAAAGCCCTGAGGAATTCCCCA
AAGAATGAGGTTTTACACACAGACATCATGAAAGGGTCGGGTGAACCCCAGCCAGATCTCCAGC
TCACCAAGAGCCTAGAGAAAACCTTTAAGAACATCCTGGAACTCAAGAATGCGGGGCGGCCGCA
GAACGACCCAGCGGCCAGCGGCGCGGTGGACCTGGACTTCCCCAGCTTTTCTCCAATGGCTTCG
CAGGAAAACTGCCTGGAAAAGTTCATCCCGGACCACAGCGAAGGCGTTGTAGAAACGGACTCCA
TTTTAGAAGCAGCTGTAAATAGTATCCTAGAGTGTTAATAGCAGCCGTCCTCCCCCAGACCCTG
CCCTGGACCAGTTACATTCTCTCCCAGCAAAGCAAATGGAAACGTCTCCTGTCCCCAGCCTGCT
TGGTCCTCCGTCACAGGTTATCTTTCTAATCTCCACCCTGTTCTTTTGAAGAGCAATACATGTC
TTCGTGGCTGCAGAGAGACCCTCAGTAAACCCCCCTCTCTAGAAAGCAGTCCGATAGGCCCTCC
ACATTTCAAGTGTCATGGAAGTTTTATGGCCATTGTTGGTTAATTTGTTTTGTGGTTTGTTTCT
TAGCACTGTCACTCGAGACCACAGTACACTTGGCCCTGGGTAACATTTTGACAATCATAAGTCA
TTTCAAAAGAACAGACTTATTAAAGAAAAATCAAACAGGACTGATAGAAGCCACTTTTTTAAAG
ACTCTCTCACTGCAGCTCCAAAGTAGTGGTTTGCTTTTGTTCTGTTTTGGGGGAGAGGGTATTT
GCGTAGGGAAGACCCCATGACTCTCCTCCATGCTCGGCCCTCTGAGCAGTGACAGCCAGTGCTC
TGCCTGGAACCCCACAGGCCTGGCCTTAGACGCCAGTAGCACAGCGCAGAGCACCCTCAGACTG
CCAGTGCTGTGTGACGCTGCTGAAGCAAAGCCTTTTGGGTTTGTTGTTTTTTTTTTTTTTTTAA
GCATATTTATGTTGAATTCTGTCTGCCAATGTTCTGTTCTTAACCCCAGGTGTACGCCTTGAAA
TTCTCACGAGCTCAGTAGGGAACAATGGGAGCCAGTTCTAAGGCAGCAAGCTGGGGAGGCTGCT
GGAGCCCCCAGGGTCTTGGTGCGTGCAGCTTAAAGAGTTTTGCGTTTTATAACCGGGTAAAGGC
AACGTAACCTATGTTCTTTAGTGTTGCTGACTCCGTTCCATTTAGCCTCTGTGTCTCCTCTCCC
TCAGCCCACAGCCAAGGATCAAAAGGCTTTCAACTTGAAAATCACGCTGTGCTCTCTCAGTTGA
CGCTTTTGAAGGGTTCGCTGGCCTCGTTTGTGAGAATAGTAGTCAGCAGTGTGTCATTTATTCC
CAAACACAGTAAACCAAAGGTCACAACCAGCAGGCCACTAAAGGAAGGAACTGAGGCAGGAGAC
GGGCATGTCCTGGCCCCGCCTCGCCGTGGGTGCTCCTCGCTCACCCGTGGAGCCTTCCTCTTTT
TTATTTATGTTCTT

hide sequence

RefSeq Acc Id:

XM_006244508 ⟹ XP_006244570

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	21,648,964 - 21,682,985 (+)	NCBI
mRatBN7.2	9	14,152,440 - 14,185,368 (+)	NCBI
Rnor_6.0	9	16,463,773 - 16,495,751 (+)	NCBI
Rnor_5.0	9	15,369,213 - 15,403,045 (+)	NCBI

Sequence:

show sequence

TGCCTCCCAAGGGCTAAGAACACAGATGTCATCATGTCACCATGCCTGGCTTGTGTAACAGATC
ACATATCCATTTGATGATAGTTTTCCTGTTTCCCTCCCAGTCTTGTTTCCAGAAGTCATGTGTG
CAGGAACATCGGTGCCAGTATGACCTCAAATGACTCAGCCTGGGTCCTAAAGAGCCCGTTTCTC
ATGGCTGACTGCTCTTAGCCTCAGTGGCCAGCAGCCTCTTCTGCTTCACTTCTCCCATCTCCAT
CTCCCTCACCCATCCTCTCTCCTCACCCTGCGCTCTGCTCGGTGGATTGAAATCAGCCTGGCCA
CTCAGCAACCCTGCCAATCCAGCACCCCCAGGAGGGTCCCACTTCGGGGAAACTTACCCTTCCA
CTCTTCTAGAGCAGAGAAAGCGCCCTTCCCGGCAGGAGGGAATTCCACATCTGTTAGCCCTGTG
ATTGGTTTGGGGGAACTAATGGGAGCAGGGAGTTTGAACAGAGAAAAATCTCTCCGTCTGACTC
GTCCTTCCCTCTGCCATCCCTGGGCATGCCCCTCCTCTGGGCATCTCTACAGGATTTCATTCCT
CCGTCCAACTGCCGTTCACAACTGCCCTTTCCAACTGCTCCAGAACTCTTGGCCCTGGCGTTCT
GTGATGTAAATTATTCCACGCATGGCTTGAAATGGGTGAGAAGCAGGGTTGCCAGGTGTCGATC
ACTAGTGTAAGTTGACTGGCTCTCGGGGAGAACCACTCCTGGAATTTGTTCAGTTGTTACAGTC
TGGGCCAGAGCTATGCTGGCTGTGCGTGTGGCTGCTGCGGGCAGGGAGAGGGAGCTCCAAGCTG
CAGTGGGGCGAGCTTGGGCTGCAGTTTCTACTTTAAACATTCCTGGTCCAGCTATGGACTATTC
AGCATTGAACTTAGACAGTATTGCTGCACTGGGAAGCACTCAGGCCCCGCTCCTGGAGCCCGTA
TGGCCTGCACCACACGGCCTCCTGGTCTGTCTCCAGATGTGGAGAGAACCCGCTTTTTGCCTTC
CTAGAGATCATCAAAATATGTTGAGAAATCGGAATTGCTCTCAGTGTTTAGAAGTATCCAGTTA
CAACACTGAAAGACTTAAGAGTCTGAGAGCTTTTCTAAACCAAAATTTGTTCTCTGCCCGTGCT
CATTCTCCATTTGATGGCGTCACTCCGTCCTTCATGGTCCTCTCGGGAGTCTGCACATGGGAGG
TGGCTACAGCTGTCTTAGATGTGTGTGAGCCTCTGGACCTCTAAGTTGAAAACTGACTTACAGT
GAAAACACCTTTAAGTCAAAAACGTATCCAAGTAACTTAATTTTATAGTTTCTACCTTTATTTT
GATTAACTTTGTTTTTGACATGGGATCTCATGTAGCCCAGGCTGGCCTTAACCTTGTCATGTAG
GCAAGGATAGCCTTCACTTCCTGATCCTCCTGTCTCTGCCTTCCAACTCCTGGGATCACAGGTG
TTTGCCAGCATACCTGGCTTGCTCGGTTGTATTTGGTATTTGGTGTTTACTATTTATGAACTGG
GGATCTTGCTGTTGCCCAGGCTGGCCTTGAACTCTTAGACTCAAGTTCCCTTCCCTTCTCAGTC
CTAATTGAGTAGCCAGGACTTCTGGCAAATGACTGTGCCCAACAGCCACAACGTTTTGCAAATG
GCAAACTTGACAGGCGACTAGAGGAAGCTCCCATGATGACAGTTCCTCTGCAGAAGGAGGCTCA
GCGCGCAGCAGCCCCGCTGCGTCCACACTGCCAGTCGCTCTGCTCAGACTCACTGTCCTCTTTC
CTTGCAGTTGTCATGGATGATGACGATGACTCCTGTCTCCTCGATCTTATTGGAGACCCACAAG
CATTGAACTATTTTCTGCACGGACCTAGCAGTAAATCGAGCGGCGATGACGTGACGAACGCAGG
GTATTCTGCAGCCAATTCTAATTCAATTTTCGCCAACTCCACGAACGCTGACCCTAAGTCATCC
CTCAAAGGTGTAAGTAACCAGCTCGGAGAAGGGCCCAGTGACGGGCTGCCGCTTGCAAGCAGCC
TTCAGTTTCTTGAAGATGAACTTGAGTCTTCTCCTCTCCCTGATCTCAGTGAGGACCAACCCTT
TGACATTCTTCAGAAATCCTTGCAGGAGGCTAATATCACTGAACAGACGCTGGCAGAAGAGGCA
TATCTGGATGCCAGTATAGGCTCGAGCCAACAGTTTGCACAAGCCCAGCTTCATCCTTCTTCAT
CAGCATCCTTTACTCAGGCTTCTAATGTTTCTAATTACTCAGGTCAGACACTGCAGCCTATCGG
GGTGACTCACGTGCCTGTCGGAGCATCGTTTGCAAGCAATACAGTGGGTGTACAGCATGGCTTT
ATGCAACACGTGGGGATCAGTGTTCCCAGCCAGCATTTGCCCAATAGCAGCCAGATCAGTGGCT
CCGGTCAGATTCAGTTAATCGGGTCCTTTGGTAATCAGCCTTCCATGATGACTATTAATAACCT
AGATGGCTCTCAAATCATATTGAAAGGCAGTGGGCAGCAAGCCCCGTCCAGTGTGAGTGGGGGG
CTTCTGGTTCACAGACAGACTCCTAACGGCAACTCTTTGTTTGGGAACCCCACTTCCAGCCCCG
GAGCACAGCCTGTCACCGTCCCATTTAACAGCACAAATTTTCAAGCATCTCTACCTGTGCATAA
CATCATTATTCAAAGGGGTCTCGCACCAAATTCAAATAAAGTCCCAATTAATATCCAGCCAAAG
CCGATCCAGATGGGTCAGCAGAGTACATACAATGTGAACAGCCTTGGACTCCAGCAGCACCACG
TCCAGCAAGGGATCTCCTTCGCCTCTGCAAGCTCGCCCCAGGGCTCCGTGGTTGGTCCACACAT
GTCTGTGAACATTGTCAACCAACAGAACGCGAGGAAGCCTGTCACCTCACAGGCGGTGAGCAGC
GCAGGGGGCAGCATTGTTATTCACTCCCCCATGGGCCAGCCTCACACACCCCAAAGTCAGTTCC
TTATACCCACAAGCCTTTCTGTCAGCTCCAACTCGGTCCACCATGTCCAGACTATAAATGGGCA
ACTTGTTCAGACTCAGCCCTCCCAGCTCATCTCTGGCCAAGTGGCCTCAGAGCATGTCATGTTG
AATAGGAATTCTTCTAACATGCTCAGGACCAACCAACCATATGCCGGACAGATGCTCAACAACC
AGAGTGCCGCTGTCCAGCTGGTGTCTGGGCAGACTTTTGCCACCTCTGGAAGCCCAGTGATCGT
CAACCATGCCTCTCCTCAGATCGTGGGAGGACAGATGCCCTTGCAGCAGGCCTCACCAACTGTG
CTACACCTGTCGCCTGGGCAGAGCAGTGTTTCCCAAGGAAGGCCAGGCTTCGCCACCATGGCCT
CGGTGAGCAGCATGTCAGGACCTGCTCGGTTCCCCGCCGTCAGCTCAGCTAGTACTGCCCACCC
TACTCTTGGGCCTGCAGTACAGTCTGGGGCATCAGGATCAAACTTTACGGGAGACCAGCTGACA
CAGGCAAACAGAACTCCGGTACCCGTCAGTGTGTCCCACCGTCTTCCAGTCTCTGCTTCCAAAT
CTCCCAGCACCTTGAGCAGCACCCCGGGGACTCAGCAGCAGTTCTTCTGTCAGGCTCCGAAGAA
GTGTTTGAACCAGACCGCCCCCATTCCCACCCCCATTCCCACGTCCAAGACCACAGACAGCCTG
CGGCAACCACAGATCCCTGGGCTCTTGAGCACAGCACTGCCAGGACAGGATTGTGGAAGCAAAA
TTATGCCAGCACCCTTGGGGACCACACAGCCACAGCAGGAAAACTCAGTTGGATCTTCCCCGAG
CCAGACAGCCGTGCAGGTGGACAGTCATTCAGGACAGAAGAGGCCTGCTGCCAAACAGCTGACT
AAAGGAGCTTTCATCCTCCAGCAGTTACAGAGGGACCAAGCCCATGCTGTGACACCCGACAAAA
GCCAGTTCCGATCACTGACTGACACCGTGCAGAGACTGCTCTCCTACCACGTGTGCCAAGGCTC
CATGCCCACGGAGGAAGACCTGAGCAAAGTGGACAGTGAATTTGAAGAAGTCGCCACTCAGCTC
CTCAAAAGGACCCACGCTATGCTGAACAAATACAGATCCCTGCTCCTCGAAGACGCCATGAGGA
TCAACCCCTCTGCAGAGATGGTGATGATTGATAGGATGTTCAACCAGGAGGAAAGAGCTTCCCT
GTCACGGGACAAGCGTCTGGCGCTCGTAGATCCTGAGGGTTTTCAGGCCGATTTCTGTTGTTCC
TTTAAACTTGACGAAGCTGCACCTGAGACACCGCTTGACAGGAGTGACCAGCATCGCAGCAAAA
CCAGCTCGCTCCATCAGGTGCCCAGGGCCCAAAGCAGAGACCGAGCCAAGCCAGGCGTGGCAGA
AGCAACGAATCATGACCAGTTTCATCTAGTGCCTAACCACATAGTGGTCTCTGCAGAGGGAAAC
ATTTCTAAAAAGTCAGAAGGCCACAGTAGAACACTGAAATTTGACAAAGGGGTCTTAGGCCAAT
ACCGGGGTCCGCCTGAGGACAAGGGCGGCCGGAGGGACCCTGCCAAGGCCAGCGGGTGCTCTCC
AGGCCCTGAAGGCCACCGCAAAACTTTGCCCAGGCCAGACCATGGCTCTGAGAGCAAGCTCCCG
GGTATCCTGGCCAGCTCGCACATGGAGATGCCGTGCCTCGACTCCTTCCAGGACAAAGCCCTGA
GGAATTCCCCAAAGAATGAGGTTTTACACACAGACATCATGAAAGGGTCGGGTGAACCCCAGCC
AGATCTCCAGCTCACCAAGAGCCTAGAGAAAACCTTTAAGAACATCCTGGAACTCAAGAATGCG
GGGCGGCCGCAGAACGACCCAGCGGCCAGCGGCGCGGTGGACCTGGACTTCCCCAGCTTTTCTC
CAATGGCTTCGCAGGAAAACTGCCTGGAAAAGTTCATCCCGGACCACAGCGAAGGCGTTGTAGA
AACGGACTCCATTTTAGAAGCAGCTGTAAATAGTATCCTAGAGTGTTAATAGCAGCCGTCCTCC
CCCAGACCCTGCCCTGGACCAGTTACATTCTCTCCCAGCAAAGCAAATGGAAACGTCTCCTGTC
CCCAGCCTGCTTGGTCCTCCGTCACAGGTTATCTTTCTAATCTCCACCCTGTTCTTTTGAAGAG
CAATACATGTCTTCGTGGCTGCAGAGAGACCCTCAGTAAACCCCCCTCTCTAGAAAGCAGTCCG
ATAGGCCCTCCACATTTCAAGTGTCATGGAAGTTTTATGGCCATTGTTGGTTAATTTGTTTTGT
GGTTTGTTTCTTAGCACTGTCACTCGAGACCACAGTACACTTGGCCCTGGGTAACATTTTGACA
ATCATAAGTCATTTCAAAAGAACAGACTTATTAAAGAAAAATCAAACAGGACTGATAGAAGCCA
CTTTTTTAAAGACTCTCTCACTGCAGCTCCAAAGTAGTGGTTTGCTTTTGTTCTGTTTTGGGGG
AGAGGGTATTTGCGTAGGGAAGACCCCATGACTCTCCTCCATGCTCGGCCCTCTGAGCAGTGAC
AGCCAGTGCTCTGCCTGGAACCCCACAGGCCTGGCCTTAGACGCCAGTAGCACAGCGCAGAGCA
CCCTCAGACTGCCAGTGCTGTGTGACGCTGCTGAAGCAAAGCCTTTTGGGTTTGTTGTTTTTTT
TTTTTTTTTAAGCATATTTATGTTGAATTCTGTCTGCCAATGTTCTGTTCTTAACCCCAGGTGT
ACGCCTTGAAATTCTCACGAGCTCAGTAGGGAACAATGGGAGCCAGTTCTAAGGCAGCAAGCTG
GGGAGGCTGCTGGAGCCCCCAGGGTCTTGGTGCGTGCAGCTTAAAGAGTTTTGCGTTTTATAAC
CGGGTAAAGGCAACGTAACCTATGTTCTTTAGTGTTGCTGACTCCGTTCCATTTAGCCTCTGTG
TCTCCTCTCCCTCAGCCCACAGCCAAGGATCAAAAGGCTTTCAACTTGAAAATCACGCTGTGCT
CTCTCAGTTGACGCTTTTGAAGGGTTCGCTGGCCTCGTTTGTGAGAATAGTAGTCAGCAGTGTG
TCATTTATTCCCAAACACAGTAAACCAAAGGTCACAACCAGCAGGCCACTAAAGGAAGGAACTG
AGGCAGGAGACGGGCATGTCCTGGCCCCGCCTCGCCGTGGGTGCTCCTCGCTCACCCGTGGAGC
CTTCCTCTTTTTTATTTATGTTCTTTGCGGGGAGCGTTCCCTGTTTTCCGCTCCTGTGGGCCTG
TACCAGGCATGATGCTTCTGTTGCTACTGGCTCTCTTCCTGCCGTAGTAACAGGTCATGGTGCT
GCTGTTTGCTGCCTCCCCACCACCTCCACCCCAGCCGTCAGCGGGGATCGGAGGTCGTTTTGGT
TACTGTGAGGGCTCGTTCCCTCCGGCCATCCCTCTGGCTGTGTAAATGTACCCGTTGATTTCTG
CTTCGTCATCCCCCAACGCAGTTGTCCCTTCGGTCATCATGTGGAGTGTTTCTTTTCCAGATTG
GCCTGCAGTGGAAAGGAAGGCTTTTGATTTTGACTTTGATCTTTTTTTCAAATAACACAGCAGC
AATCTAGGCATGTTGGCATACACCTGTAATCCCAGCAGTCAGGTGACTGAAGCAGGAGTCACAG
GTTCAAGGCCAAACAAGAAAAAAAGCTGAGAAATAGCAGAGTGTGTGGACCCTTTCTACCCCTG
TGTCCACTACATAGACAAACTCTGCGAGACAGACAGACAGCCTTTGAGAGCAATGTACCTTCTC
CCACCCACAACCCAGCCAACCGAAACAGAAAACTCTGGGCTGTCTTAGAGTTGCCCTTTTCTTC
CTTCTCTGTGCCAATATCCAAGTTGCTGACTTCCTTCCTGTATTGTAACACATTAGAAAGATGA
GTTATGTGCCAGTTAGGACTCTGTCTGGGCTTCCCTGGGTTACCAGCCTGCCCTGCTCTCTCTG
GCGTCACAGGCTCTTCTCATAGCCTCATGACCGCCTGCACACGGCTAGTGATGAATTACTTTAA
TTATTGCAAATCAGTGGAATTCTTAAGAAGTCTCGTGTATATTCCTTACCTCTTCCCTCCCGCT
CCAGCCCCAGCTTTCTTTCCTGTCTGTCAAATCACAGGGCTTCTCATCCCTGACATTGGTCCCA
CACACCGAGAGCCTACCGTACCAAAATGAAACTTGTAAATTTTTGTGTCCTTGTATGTAAGTTT
ACTTTCTATGGAGGAAAGACTCTAGATAATGACAAATGAAGATTACAAAGTGTATTTTACTCCT
GTGATCAGGTTACACCACATGGGTCATAACTCACTCACGAGCCCCCGCTGGTGAAGGGAAATGC
TCTGCCTCAGTGGCCAACGGTTGGTGGTTCAGGGTCATTAGTCAGTTGAGTTTTAGAACGCGTG
CTCAGTAACAAAAATCATTTTTCCTTCCCTTTGTTTTTAATCTGTTTGTTGTTGTGGAAAAGTA
TGAATTTGTTATTACGCATTGATTTTCTGTGTCCTTAAGTACTGCCTAAAGATGAAGCAAATTT
TGAAGTGGCAATTACTATAAGGAAATCCTTTAGCTCTGGAGAATTTAGTGGGCTCTGTTAGATT
GGGAGGCCTCACAGGCTGGCCGGCTCCGAGGACGGTCACTCACTGTCAGTGTGGTGTGGGCTTT
ATTTGCTTAAATACCTTCATTTGTATAGTATGTCTCACTTGAAATTGCTTTGTATACATTTTGT
AAAAATATTTATAAAATGTTTTGTAAAAAAAAAGTATAAGAAATTGCAGTTTATTTTGTTATGT
TGGATAAATACTGTTAAACCAGTCAGTACCTATATTGTTAATCCATGGTTAGGAAATGTTCAGT
TGGAGATTACAGAATGAAACAACCATTGCAATACAGCCAAAGATTTGGGAAAATGTAA

hide sequence

RefSeq Acc Id:

XM_008766846 ⟹ XP_008765068

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	21,597,906 - 21,682,985 (+)	NCBI
mRatBN7.2	9	14,100,299 - 14,185,368 (+)	NCBI
Rnor_6.0	9	16,406,577 - 16,495,751 (+)	NCBI

Sequence:

show sequence

TTTTTTTTTCCTTCTTAAAGGGGCAGGACTTATATCCGGGATTGTGGGCAGTCTACTGCCTGGA
TGATCACGTGACTGACTTCTTGCCTTGTACCATCCCCCGTCCTTCTGGGTGCCTGGAGTGGAAG
GATCTGCCTAAGACAGTTGTCATGGATGATGACGATGACTCCTGTCTCCTCGATCTTATTGGAG
ACCCACAAGCATTGAACTATTTTCTGCACGGACCTAGCAGTAAATCGAGCGGCGATGACGTGAC
GAACGCAGGGTATTCTGCAGCCAATTCTAATTCAATTTTCGCCAACTCCACGAACGCTGACCCT
AAGTCATCCCTCAAAGGTGTAAGTAACCAGCTCGGAGAAGGGCCCAGTGACGGGCTGCCGCTTG
CAAGCAGCCTTCAGTTTCTTGAAGATGAACTTGAGTCTTCTCCTCTCCCTGATCTCAGTGAGGA
CCAACCCTTTGACATTCTTCAGAAATCCTTGCAGGAGGCTAATATCACTGAACAGACGCTGGCA
GAAGAGGCATATCTGGATGCCAGTATAGGCTCGAGCCAACAGTTTGCACAAGCCCAGCTTCATC
CTTCTTCATCAGCATCCTTTACTCAGGCTTCTAATGTTTCTAATTACTCAGGTCAGACACTGCA
GCCTATCGGGGTGACTCACGTGCCTGTCGGAGCATCGTTTGCAAGCAATACAGTGGGTGTACAG
CATGGCTTTATGCAACACGTGGGGATCAGTGTTCCCAGCCAGCATTTGCCCAATAGCAGCCAGA
TCAGTGGCTCCGGTCAGATTCAGTTAATCGGGTCCTTTGGTAATCAGCCTTCCATGATGACTAT
TAATAACCTAGATGGCTCTCAAATCATATTGAAAGGCAGTGGGCAGCAAGCCCCGTCCAGTGTG
AGTGGGGGGCTTCTGGTTCACAGACAGACTCCTAACGGCAACTCTTTGTTTGGGAACCCCACTT
CCAGCCCCGGAGCACAGCCTGTCACCGTCCCATTTAACAGCACAAATTTTCAAGCATCTCTACC
TGTGCATAACATCATTATTCAAAGGGGTCTCGCACCAAATTCAAATAAAGTCCCAATTAATATC
CAGCCAAAGCCGATCCAGATGGGTCAGCAGAGTACATACAATGTGAACAGCCTTGGACTCCAGC
AGCACCACGTCCAGCAAGGGATCTCCTTCGCCTCTGCAAGCTCGCCCCAGGGCTCCGTGGTTGG
TCCACACATGTCTGTGAACATTGTCAACCAACAGAACGCGAGGAAGCCTGTCACCTCACAGGCG
GTGAGCAGCGCAGGGGGCAGCATTGTTATTCACTCCCCCATGGGCCAGCCTCACACACCCCAAA
GTCAGTTCCTTATACCCACAAGCCTTTCTGTCAGCTCCAACTCGGTCCACCATGTCCAGACTAT
AAATGGGCAACTTGTTCAGACTCAGCCCTCCCAGCTCATCTCTGGCCAAGTGGCCTCAGAGCAT
GTCATGTTGAATAGGAATTCTTCTAACATGCTCAGGACCAACCAACCATATGCCGGACAGATGC
TCAACAACCAGAGTGCCGCTGTCCAGCTGGTGTCTGGGCAGACTTTTGCCACCTCTGGAAGCCC
AGTGATCGTCAACCATGCCTCTCCTCAGATCGTGGGAGGACAGATGCCCTTGCAGCAGGCCTCA
CCAACTGTGCTACACCTGTCGCCTGGGCAGAGCAGTGTTTCCCAAGGAAGGCCAGGCTTCGCCA
CCATGGCCTCGGTGAGCAGCATGTCAGGACCTGCTCGGTTCCCCGCCGTCAGCTCAGCTAGTAC
TGCCCACCCTACTCTTGGGCCTGCAGTACAGTCTGGGGCATCAGGATCAAACTTTACGGGAGAC
CAGCTGACACAGGCAAACAGAACTCCGGTACCCGTCAGTGTGTCCCACCGTCTTCCAGTCTCTG
CTTCCAAATCTCCCAGCACCTTGAGCAGCACCCCGGGGACTCAGCAGCAGTTCTTCTGTCAGGC
TCCGAAGAAGTGTTTGAACCAGACCGCCCCCATTCCCACCCCCATTCCCACGTCCAAGACCACA
GACAGCCTGCGGCAACCACAGATCCCTGGGCTCTTGAGCACAGCACTGCCAGGACAGGATTGTG
GAAGCAAAATTATGCCAGCACCCTTGGGGACCACACAGCCACAGCAGGAAAACTCAGTTGGATC
TTCCCCGAGCCAGACAGCCGTGCAGGTGGACAGTCATTCAGGACAGAAGAGGCCTGCTGCCAAA
CAGCTGACTAAAGGAGCTTTCATCCTCCAGCAGTTACAGAGGGACCAAGCCCATGCTGTGACAC
CCGACAAAAGCCAGTTCCGATCACTGACTGACACCGTGCAGAGACTGCTCTCCTACCACGTGTG
CCAAGGCTCCATGCCCACGGAGGAAGACCTGAGCAAAGTGGACAGTGAATTTGAAGAAGTCGCC
ACTCAGCTCCTCAAAAGGACCCACGCTATGCTGAACAAATACAGATCCCTGCTCCTCGAAGACG
CCATGAGGATCAACCCCTCTGCAGAGATGGTGATGATTGATAGGATGTTCAACCAGGAGGAAAG
AGCTTCCCTGTCACGGGACAAGCGTCTGGCGCTCGTAGATCCTGAGGGTTTTCAGGCCGATTTC
TGTTGTTCCTTTAAACTTGACGAAGCTGCACCTGAGACACCGCTTGACAGGAGTGACCAGCATC
GCAGCAAAACCAGCTCGCTCCATCAGGTGCCCAGGGCCCAAAGCAGAGACCGAGCCAAGCCAGG
CGTGGCAGAAGCAACGAATCATGACCAGTTTCATCTAGTGCCTAACCACATAGTGGTCTCTGCA
GAGGGAAACATTTCTAAAAAGTCAGAAGGCCACAGTAGAACACTGAAATTTGACAAAGGGGTCT
TAGGCCAATACCGGGGTCCGCCTGAGGACAAGGGCGGCCGGAGGGACCCTGCCAAGGCCAGCGG
GTGCTCTCCAGGCCCTGAAGGCCACCGCAAAACTTTGCCCAGGCCAGACCATGGCTCTGAGAGC
AAGCTCCCGGGTATCCTGGCCAGCTCGCACATGGAGATGCCGTGCCTCGACTCCTTCCAGGACA
AAGCCCTGAGGAATTCCCCAAAGAATGAGGTTTTACACACAGACATCATGAAAGGGTCGGGTGA
ACCCCAGCCAGATCTCCAGCTCACCAAGAGCCTAGAGAAAACCTTTAAGAACATCCTGGAACTC
AAGAATGCGGGGCGGCCGCAGAACGACCCAGCGGCCAGCGGCGCGGTGGACCTGGACTTCCCCA
GCTTTTCTCCAATGGCTTCGCAGGAAAACTGCCTGGAAAAGTTCATCCCGGACCACAGCGAAGG
CGTTGTAGAAACGGACTCCATTTTAGAAGCAGCTGTAAATAGTATCCTAGAGTGTTAATAGCAG
CCGTCCTCCCCCAGACCCTGCCCTGGACCAGTTACATTCTCTCCCAGCAAAGCAAATGGAAACG
TCTCCTGTCCCCAGCCTGCTTGGTCCTCCGTCACAGGTTATCTTTCTAATCTCCACCCTGTTCT
TTTGAAGAGCAATACATGTCTTCGTGGCTGCAGAGAGACCCTCAGTAAACCCCCCTCTCTAGAA
AGCAGTCCGATAGGCCCTCCACATTTCAAGTGTCATGGAAGTTTTATGGCCATTGTTGGTTAAT
TTGTTTTGTGGTTTGTTTCTTAGCACTGTCACTCGAGACCACAGTACACTTGGCCCTGGGTAAC
ATTTTGACAATCATAAGTCATTTCAAAAGAACAGACTTATTAAAGAAAAATCAAACAGGACTGA
TAGAAGCCACTTTTTTAAAGACTCTCTCACTGCAGCTCCAAAGTAGTGGTTTGCTTTTGTTCTG
TTTTGGGGGAGAGGGTATTTGCGTAGGGAAGACCCCATGACTCTCCTCCATGCTCGGCCCTCTG
AGCAGTGACAGCCAGTGCTCTGCCTGGAACCCCACAGGCCTGGCCTTAGACGCCAGTAGCACAG
CGCAGAGCACCCTCAGACTGCCAGTGCTGTGTGACGCTGCTGAAGCAAAGCCTTTTGGGTTTGT
TGTTTTTTTTTTTTTTTTAAGCATATTTATGTTGAATTCTGTCTGCCAATGTTCTGTTCTTAAC
CCCAGGTGTACGCCTTGAAATTCTCACGAGCTCAGTAGGGAACAATGGGAGCCAGTTCTAAGGC
AGCAAGCTGGGGAGGCTGCTGGAGCCCCCAGGGTCTTGGTGCGTGCAGCTTAAAGAGTTTTGCG
TTTTATAACCGGGTAAAGGCAACGTAACCTATGTTCTTTAGTGTTGCTGACTCCGTTCCATTTA
GCCTCTGTGTCTCCTCTCCCTCAGCCCACAGCCAAGGATCAAAAGGCTTTCAACTTGAAAATCA
CGCTGTGCTCTCTCAGTTGACGCTTTTGAAGGGTTCGCTGGCCTCGTTTGTGAGAATAGTAGTC
AGCAGTGTGTCATTTATTCCCAAACACAGTAAACCAAAGGTCACAACCAGCAGGCCACTAAAGG
AAGGAACTGAGGCAGGAGACGGGCATGTCCTGGCCCCGCCTCGCCGTGGGTGCTCCTCGCTCAC
CCGTGGAGCCTTCCTCTTTTTTATTTATGTTCTTTGCGGGGAGCGTTCCCTGTTTTCCGCTCCT
GTGGGCCTGTACCAGGCATGATGCTTCTGTTGCTACTGGCTCTCTTCCTGCCGTAGTAACAGGT
CATGGTGCTGCTGTTTGCTGCCTCCCCACCACCTCCACCCCAGCCGTCAGCGGGGATCGGAGGT
CGTTTTGGTTACTGTGAGGGCTCGTTCCCTCCGGCCATCCCTCTGGCTGTGTAAATGTACCCGT
TGATTTCTGCTTCGTCATCCCCCAACGCAGTTGTCCCTTCGGTCATCATGTGGAGTGTTTCTTT
TCCAGATTGGCCTGCAGTGGAAAGGAAGGCTTTTGATTTTGACTTTGATCTTTTTTTCAAATAA
CACAGCAGCAATCTAGGCATGTTGGCATACACCTGTAATCCCAGCAGTCAGGTGACTGAAGCAG
GAGTCACAGGTTCAAGGCCAAACAAGAAAAAAAGCTGAGAAATAGCAGAGTGTGTGGACCCTTT
CTACCCCTGTGTCCACTACATAGACAAACTCTGCGAGACAGACAGACAGCCTTTGAGAGCAATG
TACCTTCTCCCACCCACAACCCAGCCAACCGAAACAGAAAACTCTGGGCTGTCTTAGAGTTGCC
CTTTTCTTCCTTCTCTGTGCCAATATCCAAGTTGCTGACTTCCTTCCTGTATTGTAACACATTA
GAAAGATGAGTTATGTGCCAGTTAGGACTCTGTCTGGGCTTCCCTGGGTTACCAGCCTGCCCTG
CTCTCTCTGGCGTCACAGGCTCTTCTCATAGCCTCATGACCGCCTGCACACGGCTAGTGATGAA
TTACTTTAATTATTGCAAATCAGTGGAATTCTTAAGAAGTCTCGTGTATATTCCTTACCTCTTC
CCTCCCGCTCCAGCCCCAGCTTTCTTTCCTGTCTGTCAAATCACAGGGCTTCTCATCCCTGACA
TTGGTCCCACACACCGAGAGCCTACCGTACCAAAATGAAACTTGTAAATTTTTGTGTCCTTGTA
TGTAAGTTTACTTTCTATGGAGGAAAGACTCTAGATAATGACAAATGAAGATTACAAAGTGTAT
TTTACTCCTGTGATCAGGTTACACCACATGGGTCATAACTCACTCACGAGCCCCCGCTGGTGAA
GGGAAATGCTCTGCCTCAGTGGCCAACGGTTGGTGGTTCAGGGTCATTAGTCAGTTGAGTTTTA
GAACGCGTGCTCAGTAACAAAAATCATTTTTCCTTCCCTTTGTTTTTAATCTGTTTGTTGTTGT
GGAAAAGTATGAATTTGTTATTACGCATTGATTTTCTGTGTCCTTAAGTACTGCCTAAAGATGA
AGCAAATTTTGAAGTGGCAATTACTATAAGGAAATCCTTTAGCTCTGGAGAATTTAGTGGGCTC
TGTTAGATTGGGAGGCCTCACAGGCTGGCCGGCTCCGAGGACGGTCACTCACTGTCAGTGTGGT
GTGGGCTTTATTTGCTTAAATACCTTCATTTGTATAGTATGTCTCACTTGAAATTGCTTTGTAT
ACATTTTGTAAAAATATTTATAAAATGTTTTGTAAAAAAAAAGTATAAGAAATTGCAGTTTATT
TTGTTATGTTGGATAAATACTGTTAAACCAGTCAGTACCTATATTGTTAATCCATGGTTAGGAA
ATGTTCAGTTGGAGATTACAGAATGAAACAACCATTGCAATACAGCCAAAGATTTGGGAAAATG
TAA

hide sequence

RefSeq Acc Id:

XM_039083177 ⟹ XP_038939105

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	21,597,886 - 21,682,985 (+)	NCBI
mRatBN7.2	9	14,100,253 - 14,185,368 (+)	NCBI

RefSeq Acc Id:

XM_039083178 ⟹ XP_038939106

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	21,597,962 - 21,682,985 (+)	NCBI
mRatBN7.2	9	14,100,308 - 14,185,368 (+)	NCBI

RefSeq Acc Id:

XM_063266846 ⟹ XP_063122916

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	21,651,739 - 21,682,985 (+)	NCBI

RefSeq Acc Id:

XM_063266847 ⟹ XP_063122917

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	21,636,542 - 21,682,985 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001100358	(Get FASTA)	NCBI Sequence Viewer
	NP_001424578	(Get FASTA)	NCBI Sequence Viewer
	XP_006244570	(Get FASTA)	NCBI Sequence Viewer
	XP_008765068	(Get FASTA)	NCBI Sequence Viewer
	XP_038939105	(Get FASTA)	NCBI Sequence Viewer
	XP_038939106	(Get FASTA)	NCBI Sequence Viewer
	XP_063122916	(Get FASTA)	NCBI Sequence Viewer
	XP_063122917	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDM18865	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000021762
	ENSRNOP00000021762.6
	ENSRNOP00000071303
	ENSRNOP00000071303.3
	ENSRNOP00000098604.2
	ENSRNOP00000098605.2

RefSeq Acc Id:

NP_001100358 ⟸ NM_001106888

- UniProtKB:

D4A240 (UniProtKB/TrEMBL), A6JIL7 (UniProtKB/TrEMBL), A0A0G2K049 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MDDDDDSCLLDLIGDPQALNYFLHGPSSKSSGDDVTNAGYSAANSNSIFANSTNADPKSSLKGV
SNQLGEGPSDGLPLASSLQFLEDELESSPLPDLSEDQPFDILQKSLQEANITEQTLAEEAYLDA
SIGSSQQFAQAQLHPSSSASFTQASNVSNYSGQTLQPIGVTHVPVGASFASNTVGVQHGFMQHV
GISVPSQHLPNSSQISGSGQIQLIGSFGNQPSMMTINNLDGSQIILKGSGQQAPSSVSGGLLVH
RQTPNGNSLFGNPTSSPGAQPVTVPFNSTNFQASLPVHNIIIQRGLAPNSNKVPINIQPKPIQM
GQQSTYNVNSLGLQQHHVQQGISFASASSPQGSVVGPHMSVNIVNQQNARKPVTSQAVSSAGGS
IVIHSPMGQPHTPQSQFLIPTSLSVSSNSVHHVQTINGQLVQTQPSQLISGQVASEHVMLNRNS
SNMLRTNQPYAGQMLNNQSAAVQLVSGQTFATSGSPVIVNHASPQIVGGQMPLQQASPTVLHLS
PGQSSVSQGRPGFATMASVSSMSGPARFPAVSSASTAHPTLGPAVQSGASGSNFTGDQLTQANR
TPVPVSVSHRLPVSASKSPSTLSSTPGTQQQFFCQAPKKCLNQTAPIPTPIPTSKTTDSLRQPQ
IPGLLSTALPGQDCGSKIMPAPLGTTQPQQENSVGSSPSQTAVQVDSHSGQKRPAAKQLTKGAF
ILQQLQRDQAHAVTPDKSQFRSLTDTVQRLLSYHVCQGSMPTEEDLSKVDSEFEEVATQLLKRT
HAMLNKYRSLLLEDAMRINPSAEMVMIDRMFNQEERASLSRDKRLALVDPEGFQADFCCSFKLD
EAAPETPLDRSDQHRSKTSSLHQVPRAQSRDRAKPGVAEATNHDQFHLVPNHIVVSAEGNISKK
SEGHSRTLKFDKGVLGQYRGPPEDKGGRRDPAKASGCSPGPEGHRKTLPRPDHGSESKLPGILA
SSHMEMPCLDSFQDKALRNSPKNEVLHTDIMKGSGEPQPDLQLTKSLEKTFKNILELKNAGRPQ
NDPAASGAVDLDFPSFSPMASQENCLEKFIPDHSEGVVETDSILEAAVNSILEC

hide sequence

RefSeq Acc Id:	XP_006244570 ⟸ XM_006244508
- Peptide Label:	isoform X2
- UniProtKB:	D4A240 (UniProtKB/TrEMBL), A6JIL7 (UniProtKB/TrEMBL), A0A0G2K049 (UniProtKB/TrEMBL)
- Sequence:	show sequence MMTVPLQKEAQRAAAPLRPHCQSLCSDSLSSFLAVVMDDDDDSCLLDLIGDPQALNYFLHGPSS KSSGDDVTNAGYSAANSNSIFANSTNADPKSSLKGVSNQLGEGPSDGLPLASSLQFLEDELESS PLPDLSEDQPFDILQKSLQEANITEQTLAEEAYLDASIGSSQQFAQAQLHPSSSASFTQASNVS NYSGQTLQPIGVTHVPVGASFASNTVGVQHGFMQHVGISVPSQHLPNSSQISGSGQIQLIGSFG NQPSMMTINNLDGSQIILKGSGQQAPSSVSGGLLVHRQTPNGNSLFGNPTSSPGAQPVTVPFNS TNFQASLPVHNIIIQRGLAPNSNKVPINIQPKPIQMGQQSTYNVNSLGLQQHHVQQGISFASAS SPQGSVVGPHMSVNIVNQQNARKPVTSQAVSSAGGSIVIHSPMGQPHTPQSQFLIPTSLSVSSN SVHHVQTINGQLVQTQPSQLISGQVASEHVMLNRNSSNMLRTNQPYAGQMLNNQSAAVQLVSGQ TFATSGSPVIVNHASPQIVGGQMPLQQASPTVLHLSPGQSSVSQGRPGFATMASVSSMSGPARF PAVSSASTAHPTLGPAVQSGASGSNFTGDQLTQANRTPVPVSVSHRLPVSASKSPSTLSSTPGT QQQFFCQAPKKCLNQTAPIPTPIPTSKTTDSLRQPQIPGLLSTALPGQDCGSKIMPAPLGTTQP QQENSVGSSPSQTAVQVDSHSGQKRPAAKQLTKGAFILQQLQRDQAHAVTPDKSQFRSLTDTVQ RLLSYHVCQGSMPTEEDLSKVDSEFEEVATQLLKRTHAMLNKYRSLLLEDAMRINPSAEMVMID RMFNQEERASLSRDKRLALVDPEGFQADFCCSFKLDEAAPETPLDRSDQHRSKTSSLHQVPRAQ SRDRAKPGVAEATNHDQFHLVPNHIVVSAEGNISKKSEGHSRTLKFDKGVLGQYRGPPEDKGGR RDPAKASGCSPGPEGHRKTLPRPDHGSESKLPGILASSHMEMPCLDSFQDKALRNSPKNEVLHT DIMKGSGEPQPDLQLTKSLEKTFKNILELKNAGRPQNDPAASGAVDLDFPSFSPMASQENCLEK FIPDHSEGVVETDSILEAAVNSILEC hide sequence

RefSeq Acc Id:	XP_008765068 ⟸ XM_008766846
- Peptide Label:	isoform X2
- UniProtKB:	D4A240 (UniProtKB/TrEMBL), A6JIL7 (UniProtKB/TrEMBL), A0A0G2K049 (UniProtKB/TrEMBL)
- Sequence:	show sequence MDDDDDSCLLDLIGDPQALNYFLHGPSSKSSGDDVTNAGYSAANSNSIFANSTNADPKSSLKGV SNQLGEGPSDGLPLASSLQFLEDELESSPLPDLSEDQPFDILQKSLQEANITEQTLAEEAYLDA SIGSSQQFAQAQLHPSSSASFTQASNVSNYSGQTLQPIGVTHVPVGASFASNTVGVQHGFMQHV GISVPSQHLPNSSQISGSGQIQLIGSFGNQPSMMTINNLDGSQIILKGSGQQAPSSVSGGLLVH RQTPNGNSLFGNPTSSPGAQPVTVPFNSTNFQASLPVHNIIIQRGLAPNSNKVPINIQPKPIQM GQQSTYNVNSLGLQQHHVQQGISFASASSPQGSVVGPHMSVNIVNQQNARKPVTSQAVSSAGGS IVIHSPMGQPHTPQSQFLIPTSLSVSSNSVHHVQTINGQLVQTQPSQLISGQVASEHVMLNRNS SNMLRTNQPYAGQMLNNQSAAVQLVSGQTFATSGSPVIVNHASPQIVGGQMPLQQASPTVLHLS PGQSSVSQGRPGFATMASVSSMSGPARFPAVSSASTAHPTLGPAVQSGASGSNFTGDQLTQANR TPVPVSVSHRLPVSASKSPSTLSSTPGTQQQFFCQAPKKCLNQTAPIPTPIPTSKTTDSLRQPQ IPGLLSTALPGQDCGSKIMPAPLGTTQPQQENSVGSSPSQTAVQVDSHSGQKRPAAKQLTKGAF ILQQLQRDQAHAVTPDKSQFRSLTDTVQRLLSYHVCQGSMPTEEDLSKVDSEFEEVATQLLKRT HAMLNKYRSLLLEDAMRINPSAEMVMIDRMFNQEERASLSRDKRLALVDPEGFQADFCCSFKLD EAAPETPLDRSDQHRSKTSSLHQVPRAQSRDRAKPGVAEATNHDQFHLVPNHIVVSAEGNISKK SEGHSRTLKFDKGVLGQYRGPPEDKGGRRDPAKASGCSPGPEGHRKTLPRPDHGSESKLPGILA SSHMEMPCLDSFQDKALRNSPKNEVLHTDIMKGSGEPQPDLQLTKSLEKTFKNILELKNAGRPQ NDPAASGAVDLDFPSFSPMASQENCLEKFIPDHSEGVVETDSILEAAVNSILEC hide sequence

Ensembl Acc Id:

ENSRNOP00000021762 ⟸ ENSRNOT00000021762

Ensembl Acc Id:

ENSRNOP00000071303 ⟸ ENSRNOT00000091809

RefSeq Acc Id:	XP_038939105 ⟸ XM_039083177
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038939106 ⟸ XM_039083178
- Peptide Label:	isoform X2
- UniProtKB:	D4A240 (UniProtKB/TrEMBL), A6JIL7 (UniProtKB/TrEMBL), A0A0G2K049 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063122917 ⟸ XM_063266847
- Peptide Label:	isoform X2
- UniProtKB:	A0A0G2K049 (UniProtKB/TrEMBL), A6JIL7 (UniProtKB/TrEMBL), D4A240 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063122916 ⟸ XM_063266846
- Peptide Label:	isoform X1
- UniProtKB:	A0A0G2K049 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000098604 ⟸ ENSRNOT00000121052

Ensembl Acc Id:

ENSRNOP00000098605 ⟸ ENSRNOT00000121053

Protein Domains

GLTSCR protein conserved

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-D4A240-F1-model_v2	AlphaFold	D4A240	1-1078	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1305680	AgrOrtholog
BioCyc Gene	G2FUF-28249	BioCyc
Ensembl Genes	ENSRNOG00000016229	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000021762	ENTREZGENE
	ENSRNOT00000021762.10	UniProtKB/TrEMBL
	ENSRNOT00000091809	ENTREZGENE
	ENSRNOT00000091809.4	UniProtKB/TrEMBL
	ENSRNOT00000121052.2	UniProtKB/TrEMBL
	ENSRNOT00000121053.2	UniProtKB/TrEMBL
InterPro	Chromatin_remod/trans_coact	UniProtKB/TrEMBL
	GSCR1_dom	UniProtKB/TrEMBL
KEGG Report	rno:301235	UniProtKB/TrEMBL
NCBI Gene	301235	ENTREZGENE
PANTHER	GLIOMA TUMOR SUPPRESSOR CANDIDATE REGION GENE 1	UniProtKB/TrEMBL
	PTHR15572:SF2	UniProtKB/TrEMBL
Pfam	GLTSCR1	UniProtKB/TrEMBL
PhenoGen	Bicral	PhenoGen
RatGTEx	ENSRNOG00000016229	RatGTEx
UniProt	A0A0G2K049	ENTREZGENE, UniProtKB/TrEMBL
	A0ABK0L4W7_RAT	UniProtKB/TrEMBL
	A0ABK0L5S6_RAT	UniProtKB/TrEMBL
	A6JIL7	ENTREZGENE, UniProtKB/TrEMBL
	D4A240	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2021-07-16	Bicral	BICRA like chromatin remodeling complex associated protein	Bicral	BRD4 interacting chromatin remodeling complex associated protein like	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2021-03-09	Bicral	BRD4 interacting chromatin remodeling complex associated protein like	LOC102555718	uncharacterized LOC102555718	Data merged from RGD:7619312	737654	PROVISIONAL
2017-04-26	Bicral	BRD4 interacting chromatin remodeling complex associated protein like	Bicral	BRD4 interacting chromatin remodelling complex associated protein like	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2017-03-29	Bicral	BRD4 interacting chromatin remodelling complex associated protein like	Gltscr1l	GLTSCR1-like	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2013-12-18	LOC102555718	uncharacterized LOC102555718			Symbol and Name status set to provisional	70820	PROVISIONAL
2012-12-10	Gltscr1l	GLTSCR1-like	RGD1305680	similar to KIAA0240	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-04-30	RGD1305680	similar to KIAA0240	RGD1305680_predicted	similar to KIAA0240 (predicted)	'predicted' is removed	2292626	APPROVED
2005-01-20	RGD1305680_predicted	similar to KIAA0240 (predicted)	LOC301235_predicted		Symbol and Name status set to approved	1331353	APPROVED
2005-01-12	LOC301235_predicted	similar to KIAA0240 (predicted)			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar