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Gene: Ccdc15 (coiled-coil domain containing 15) Rattus norvegicus

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Symbol:

Ccdc15 (Ensembl: Slc37a2)

Name:

coiled-coil domain containing 15 (Ensembl:solute carrier family 37 member 2)

RGD ID:

1305591

Description:

Predicted to be involved in cilium assembly and positive regulation of centriole elongation. Predicted to be located in centriole. Predicted to be active in centrosome. Orthologous to human CCDC15 (coiled-coil domain containing 15); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; amphetamine; bisphenol A.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

coiled-coil domain-containing protein 15; LOC367056; Slc37a2; solute carrier family 37 (glycerol-3-phosphate transporter), member 2

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	CCDC15 (coiled-coil domain containing 15)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, Treefam
Mus musculus (house mouse):	Ccdc15 (coiled-coil domain containing 15)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Ccdc15 (coiled-coil domain containing 15)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	CCDC15 (coiled-coil domain containing 15)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	CCDC15 (coiled-coil domain containing 15)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Ccdc15 (coiled-coil domain containing 15)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	CCDC15 (coiled-coil domain containing 15)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	CCDC15 (coiled-coil domain containing 15)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Ccdc15 (coiled-coil domain containing 15)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Ccdc15 (coiled-coil domain containing 15)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	CCDC15 (coiled-coil domain containing 15)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Ccdc15 (coiled-coil domain containing 15)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	ccdc15 (coiled-coil domain containing 15)	Alliance	DIOPT (Ensembl Compara\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	ccdc15	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	ccdc15	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	8	45,165,297 - 45,257,641 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	8	45,134,596 - 45,277,989 (-)	Ensembl				GRCr8
mRatBN7.2	8	36,991,147 - 37,068,849 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	8	36,998,867 - 37,068,919 (-)	Ensembl				mRatBN7.2
Dahl_SR_JrHsd	8	45,232,673 - 45,310,319 (-)	NCBI		Dahl_SR_JrHsd
Lyon_Normotensive	8	47,403,036 - 47,480,680 (-)	NCBI		Lyon_Normotensive
Lyon_Hypertensive	8	45,945,610 - 46,023,252 (-)	NCBI		Lyon_Hypertensive
F344_StmMcwi	8	37,278,687 - 37,356,348 (-)	NCBI		F344_StmMcwi
Rnor_6.0	8	39,759,077 - 39,830,235 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	8	39,762,035 - 39,830,306 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	8	39,757,789 - 39,846,057 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	8	38,534,697 - 38,603,744 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	8	37,382,910 - 37,453,937 (+)	NCBI		Celera
RGSC_v3.1	8	38,572,522 - 38,612,510 (-)	NCBI
Cytogenetic Map	8	q22	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Neurodevelopmental Disorders (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

17beta-hydroxy-5alpha-androstan-3-one (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2-hydroxypropanoic acid (ISO)

2-methylcholine (ISO)

4,4'-sulfonyldiphenol (ISO)

aflatoxin B1 (ISO)

amphetamine (EXP)

azathioprine (ISO)

benzo[a]pyrene (ISO)

bisphenol A (EXP,ISO)

bisphenol F (ISO)

cadmium atom (ISO)

cadmium dichloride (ISO)

calcitriol (ISO)

CGP 52608 (ISO)

chlorpyrifos (ISO)

cisplatin (ISO)

copper(II) sulfate (ISO)

cyclosporin A (ISO)

cytarabine (ISO)

epoxiconazole (ISO)

ethyl methanesulfonate (ISO)

formaldehyde (ISO)

gentamycin (EXP)

leflunomide (ISO)

manganese(II) chloride (EXP)

methyl methanesulfonate (ISO)

methylmercury chloride (ISO)

N-methyl-4-phenylpyridinium (EXP)

okadaic acid (ISO)

paracetamol (EXP)

potassium chromate (ISO)

propanal (ISO)

quercetin (ISO)

rac-lactic acid (ISO)

resveratrol (ISO)

testosterone (ISO)

titanium dioxide (ISO)

trichloroethene (EXP)

trichostatin A (ISO)

triphenyl phosphate (ISO)

Triptolide (ISO)

triptonide (ISO)

trovafloxacin (ISO)

urethane (ISO)

valproic acid (ISO)

vorinostat (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cilium assembly (ISO)

glucose-6-phosphate transport (IEA)

positive regulation of centriole elongation (ISO)

transmembrane transport (IEA)

Cellular Component

centriole (ISO)

centrosome (IBA,ISO)

endomembrane system (IEA)

endoplasmic reticulum membrane (IEA)

membrane (IEA)

organelle membrane (IEA)

Molecular Function

antiporter activity (IEA)

glucose 6-phosphate:phosphate antiporter activity (IEA)

transmembrane transporter activity (IEA)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
3.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:21399614

Genomics

Comparative Map Data

Ccdc15
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	8	45,165,297 - 45,257,641 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	8	45,134,596 - 45,277,989 (-)	Ensembl				GRCr8
mRatBN7.2	8	36,991,147 - 37,068,849 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	8	36,998,867 - 37,068,919 (-)	Ensembl				mRatBN7.2
Dahl_SR_JrHsd	8	45,232,673 - 45,310,319 (-)	NCBI		Dahl_SR_JrHsd
Lyon_Normotensive	8	47,403,036 - 47,480,680 (-)	NCBI		Lyon_Normotensive
Lyon_Hypertensive	8	45,945,610 - 46,023,252 (-)	NCBI		Lyon_Hypertensive
F344_StmMcwi	8	37,278,687 - 37,356,348 (-)	NCBI		F344_StmMcwi
Rnor_6.0	8	39,759,077 - 39,830,235 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	8	39,762,035 - 39,830,306 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	8	39,757,789 - 39,846,057 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	8	38,534,697 - 38,603,744 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	8	37,382,910 - 37,453,937 (+)	NCBI		Celera
RGSC_v3.1	8	38,572,522 - 38,612,510 (-)	NCBI
Cytogenetic Map	8	q22	NCBI

CCDC15
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	11	124,954,202 - 125,041,489 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	11	124,954,095 - 125,041,649 (+)	Ensembl			hg38	GRCh38
GRCh37	11	124,824,098 - 124,911,385 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	11	124,329,227 - 124,416,595 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Celera	11	121,984,158 - 122,071,427 (+)	NCBI		Celera
Cytogenetic Map	11	q24.2	NCBI
HuRef	11	120,766,209 - 120,853,474 (+)	NCBI		HuRef
CHM1_1	11	124,710,126 - 124,797,386 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	11	124,982,721 - 125,070,161 (+)	NCBI		T2T-CHM13v2.0

Ccdc15
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	9	37,178,758 - 37,262,508 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	9	37,187,131 - 37,259,728 (-)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	9	37,267,462 - 37,350,218 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	9	37,275,835 - 37,348,432 (-)	Ensembl			mm10	GRCm38
MGSCv37	9	37,083,420 - 37,155,977 (-)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	9	37,025,506 - 37,098,105 (-)	NCBI		MGSCv36	mm8
Celera	9	34,490,165 - 34,562,711 (-)	NCBI		Celera
Cytogenetic Map	9	A4	NCBI
cM Map	9	20.74	NCBI

Ccdc15
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955412	26,005,090 - 26,089,615 (+)	Ensembl
ChiLan1.0	NW_004955412	26,014,842 - 26,089,556 (+)	NCBI	ChiLan1.0	ChiLan1.0

CCDC15
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	9	125,650,094 - 125,750,743 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	11	126,754,989 - 126,850,884 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	11	119,781,702 - 119,872,629 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	11	123,696,106 - 123,783,190 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	11	123,696,718 - 123,782,549 (+)	Ensembl			panPan2	panpan1.1

CCDC15
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	5	9,425,436 - 9,505,370 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	5	9,425,997 - 9,504,919 (-)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	5	9,467,551 - 9,550,498 (-)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	5	9,361,883 - 9,444,671 (-)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	5	9,364,705 - 9,444,598 (-)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	5	9,434,680 - 9,517,431 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	5	9,405,174 - 9,487,965 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	5	9,441,819 - 9,524,807 (-)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Ccdc15
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404947	107,140,521 - 107,214,867 (+)	NCBI		HiC_Itri_2
SpeTri2.0	NW_004936743	1,441,967 - 1,462,462 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

CCDC15
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	9	52,147,082 - 52,217,674 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	9	52,146,298 - 52,217,679 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	9	57,654,393 - 57,731,500 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

CCDC15
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	1	116,086,222 - 116,203,398 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
Vero_WHO_p1.0	NW_023666043	9,917,198 - 10,020,384 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Ccdc15
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624927	962,958 - 1,084,156 (+)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624927	963,083 - 1,105,668 (+)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Ccdc15
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	8	33,459,027 - 33,532,961 (-)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Ccdc15
406 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	150
Count of miRNA genes:	117
Interacting mature miRNAs:	128
Transcripts:	ENSRNOT00000040901, ENSRNOT00000071320
Prediction methods:	Microtar, Miranda, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1357398	Slep3	Serum leptin concentration QTL 3	3.43		blood leptin amount (VT:0005667)	serum leptin level (CMO:0000780)	8	17994105	50763951	Rat
2313057	Bss76	Bone structure and strength QTL 76	3	0.0001	tibia size trait (VT:0100001)	tibia midshaft cross-sectional area (CMO:0001717)	8	39106258	91341052	Rat
1298065	Scl16	Serum cholesterol level QTL 16	3.8		blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	8	39752803	84752803	Rat
2317030	Wbc5	White blood cell count QTL 5	3.21	0.005	leukocyte quantity (VT:0000217)	white blood cell count (CMO:0000027)	8	16994642	61994642	Rat
2313067	Bss77	Bone structure and strength QTL 77	3.1	0.0001	tibia size trait (VT:0100001)	tibia midshaft endosteal cross-sectional area (CMO:0001716)	8	39106258	91341052	Rat
1578769	Uae31	Urinary albumin excretion QTL 31	3.3	0.001	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	8	39106363	103375781	Rat
2317032	Ginf2	Gastrointestinal inflammation QTL 2	3.21	0.005	liver integrity trait (VT:0010547)	liver granuloma severity score (CMO:0002157)	8	12964165	57964165	Rat
2301416	Bp315	Blood pressure QTL 315		0.008	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	8	15952279	60952279	Rat
11556286	Cm81	Cardiac mass QTL 81		0.01	heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	8	39106258	84106258	Rat
2317036	Livw3	Liver weight QTL 3	2.43	0.01	liver mass (VT:0003402)	liver weight to body weight ratio (CMO:0000633)	8	12964165	57964165	Rat
12880023	Bw184	Body weight QTL 184		0.001	body mass (VT:0001259)	body weight (CMO:0000012)	8	10382540	55382540	Rat
1578765	Klgr1	Kidney lesion grade QTL 1	3.3	0.0001	kidney morphology trait (VT:0002135)	organ lesion measurement (CMO:0000677)	8	39106363	103375781	Rat
12880028	Cm103	Cardiac mass QTL 103		0.02	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	8	10382540	55382540	Rat
2317051	Aia18	Adjuvant induced arthritis QTL 18	2.42		joint integrity trait (VT:0010548)	left rear ankle joint diameter (CMO:0002149)	8	16994642	61994642	Rat
61464	Niddm11	Non-insulin dependent diabetes mellitus QTL 11	3.1	0.001	blood insulin amount (VT:0001560)	plasma insulin level (CMO:0000342)	8	44477926	89477926	Rat
61337	Bp22	Blood pressure QTL 22	5.1		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	8	39106258	51589833	Rat
2317048	Ginf1	Gastrointestinal inflammation QTL 1	3.52	0.005	cecum mucosa thickness (VT:0010234)	enterocolitis severity score (CMO:0002138)	8	12964165	57964165	Rat
1578755	Pur5	Proteinuria QTL 5	3.3	0.0001	urine total protein amount (VT:0000032)	urine total protein excretion rate (CMO:0000756)	8	39106258	103375958	Rat
12880025	Cm102	Cardiac mass QTL 102		0.044	heart mass (VT:0007028)	heart wet weight to body weight ratio (CMO:0002408)	8	10382540	55382540	Rat
2313088	Bss75	Bone structure and strength QTL 75	3.1	0.0001	body length (VT:0001256)	body length, nose to rump (CMO:0000079)	8	39106258	91341052	Rat
1358896	Bp262	Blood pressure QTL 262	2.89		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	8	35464071	107982864	Rat
2302278	Gluco36	Glucose level QTL 36	4.2		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	8	37760859	58991895	Rat
12880044	Am9	Aortic mass QTL 9		0.007	aorta mass (VT:0002845)	aorta weight to aorta length to body weight ratio (CMO:0002722)	8	10382540	55382540	Rat
631648	Stl5	Serum triglyceride level QTL 5	4	0.0003	blood triglyceride amount (VT:0002644)	plasma triglyceride level (CMO:0000548)	8	35464071	71842899	Rat
724514	Uae15	Urinary albumin excretion QTL 15	2.9		urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	8	37760859	61459705	Rat
61353	Bp35	Blood pressure QTL 35		0.001	arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	8	39106258	84106258	Rat
631842	Inf1	Infertility severity QTL 1	4.1	0.001	seminal gland mass (VT:0010524)	seminal vesicle wet weight (CMO:0001603)	8	31543661	76543661	Rat
1359033	Bp273	Blood pressure QTL 273			arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	8	39106258	84106258	Rat
61358	Bp39	Blood pressure QTL 39	2		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	8	44447837	89447837	Rat
1358907	Cm40	Cardiac mass QTL 40	1.89		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	8	35464071	107982864	Rat
1598824	Memor4	Memory QTL 4	2.5		exploratory behavior trait (VT:0010471)	total horizontal distance resulting from voluntary locomotion in an experimental apparatus (CMO:0001443)	8	17993862	62252873	Rat
1331744	Bp217	Blood pressure QTL 217	3.398		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	8	39106258	67378345	Rat
2313046	Bss78	Bone structure and strength QTL 78	3.5	0.0001	tibia strength trait (VT:1000284)	tibia total energy absorbed before break (CMO:0001736)	8	39106258	91341052	Rat
2316950	Scl66	Serum cholesterol level QTL 66	4.1		blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	8	39106363	114525825	Rat
724540	Uae8	Urinary albumin excretion QTL 8	5		urine albumin amount (VT:0002871)	urine albumin level (CMO:0000130)	8	39106258	103375958	Rat
1358892	Kidm26	Kidney mass QTL 26	3.69		kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	8	35464071	107982864	Rat
1359021	Bp271	Blood pressure QTL 271	1.8		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	8	34125902	55607752	Rat
2302367	Slep5	Serum leptin concentration QTL 5	3.43		blood leptin amount (VT:0005667)	serum leptin level (CMO:0000780)	8	17994105	50763951	Rat
61373	Mcs4	Mammary carcinoma susceptibility QTL 4	1.1		mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	8	44475043	89475043	Rat
70206	Alc20	Alcohol consumption QTL 20	2		drinking behavior trait (VT:0001422)	ethanol intake volume to total fluid intake volume ratio (CMO:0001591)	8	39106258	49610361	Rat

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

adipose tissue	alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
10	16	12	150	248	90	89	64	138	58	22	483	330	11	227	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001191912	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006226366	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006226367	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006242815	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008766078	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008776690	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017596005	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017596006	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017596008	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017603606	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017603607	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017603608	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039082303	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JAXUCZ010000008	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000040106 ⟹ ENSRNOP00000051047

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	8	45,138,716 - 45,147,601 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000040901 ⟹ ENSRNOP00000051521

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	8	45,189,202 - 45,257,685 (-)	Ensembl
mRatBN7.2 Ensembl	8	36,998,867 - 37,068,919 (-)	Ensembl
Rnor_6.0 Ensembl	8	39,762,035 - 39,830,306 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000076872 ⟹ ENSRNOP00000068265

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	8	45,134,596 - 45,160,432 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000089662 ⟹ ENSRNOP00000073837

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	8	45,134,596 - 45,149,674 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000115568 ⟹ ENSRNOP00000093063

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	8	45,134,596 - 45,189,356 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000126302 ⟹ ENSRNOP00000107303

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	8	45,138,461 - 45,160,189 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000173703 ⟹ ENSRNOP00000109612

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	8	45,189,202 - 45,277,989 (-)	Ensembl

RefSeq Acc Id:

NM_001191912 ⟹ NP_001178841

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	45,179,970 - 45,257,568 (-)	NCBI
mRatBN7.2	8	36,991,163 - 37,068,767 (-)	NCBI
Dahl_SR_JrHsd	8	45,232,673 - 45,310,319 (-)	NCBI
Lyon_Normotensive	8	47,403,036 - 47,480,680 (-)	NCBI
Lyon_Hypertensive	8	45,945,610 - 46,023,252 (-)	NCBI
F344_StmMcwi	8	37,278,687 - 37,356,348 (-)	NCBI

RefSeq Acc Id:

XM_006242815 ⟹ XP_006242877

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	45,165,297 - 45,257,641 (-)	NCBI
mRatBN7.2	8	36,991,147 - 37,068,848 (-)	NCBI
Rnor_6.0	8	39,759,077 - 39,830,234 (-)	NCBI
Rnor_5.0	8	39,757,789 - 39,846,057 (-)	NCBI

Sequence:

show sequence

CCCAGCCCAGGATGCGTGACGAATGCGGAAGGGGCAGGGCAGGCCCGGTGTGTCAGTTTGCTGT
TTGTCCTTTGCGAAGCAGCCCGCGGAGTTTGAGTGTGAGAAGAAGTCAATGCCAGGAGGTATGA
CCCCCCTCAAGAAGCCTCGGAATCCCACAAAACTGCCCCTGACTTTAAACCCCACGAAGAGCAA
GGATGTTTTGGCAGTGCTGGCTGAGAGGAACCAGGCCATAGTACCAGTTGGGGCTTGGGTGGAA
CCTGCCTCACCAAATTGGTCGGGAATTCCAGCGCACACTTCAGCATACATACTTGAAGAGGAAA
TTAAGGAACAGCAGCGAAGGAAGCAAGAGTCTCTGAGACACTTTCAGAGACAAGTCAAACACCG
GGTCAATCAGCAGGCTAAGCTGAGGAAAAAGCAACAACTTGACAAGTCTTACAAAGCAGCAGAA
AAGGAAGGCTCTATAGCCATACGGTATTCAGACTCAGCACATTTAACTTCTAAAAGGACAAGTG
TTTTCCCTCGCAATCTGAATGCTGCTGTTGGAAGTTTTAGGTTACCCACTTCCCTGGTGCTTGG
TAATGCAACAGATGATGCAGAGAATCAGAATCAGTTGTTTGAACAACAAGCTCAAGCTCTTAGT
CAAACTATGAAGCAGGCACGTCACCAGCTGGCGTCCTTTAAAACTGTGAGTGAAAAAAAGACAT
CAGTGTTTCTAAATGGTGGAAAGAAAAGCTCTCCTACCCAAGAGGACCTTGGCTGTGGGAAAAT
TTCATCTGTTGTGGTAAGTGAGGAGAGAGACAATTTGTTTGAGAGCTGCCAGCAGGATCTCCTT
TCTGAAGACAAAGAAAAGGCTCTCAGCAAAGTTCAGAAAGTAAAATTCAAAAATCCATTATCTG
TTGTAATAAAGGAAGATGAAGGAAAGCAATTGTATCCCCATAGCCTTCAGCCTGTTCTTCCAGA
AGCCCAGGGTTATTTTGTAGAAGTTAAAAGCTGCCTTCCGGAATCTCAGAGTGATGTGATAGAT
GTCCAGGCTGTTGAGCCTAAAGCTTCAAGAATTGAACCTAAAGAGCCAGGTGGTGAGCCTGACA
CCCAGGCCGCTGGAATGGAGTTTCAGACCACAGAGCCAGACGGCCAGGCTGTGAAGACGGAAAT
TCAGGACACTCTTAAAGTCCAGACTGTTGAGCTAGACGGGGATACTGAGCTGGAAGCCCAGGAT
TCTCTACCCTCACACCAGGCCTTTCTATCCAGAGACCAAGATTTTCTGCTCAATTGTCAATACC
AGGGTTCTTTACCCAAAGATCACTGTGTTCTCCCTAATTACCAGAATGTTTTACCTAAATACCA
GGACCAGCATTTTCTACCTGTAGCCCAGGAATTTCTACCTACAAACCAACTTGCTTTACCCAAA
GAACAGAATCATCCACTCAAATGTCAGAAGCAGGATCTCCCACCTGAAGACCAGTTTCCCCTGC
CCAGACATCAGTATATTTTACCTATATATCAGGACCGAAGAGATCCACATGTTCTTCCTAAATG
TCAGGATCATGATGTTCTTTCCAAAGCCCAGAACTATCTACACAGTTATCAGGAGCAGGATCTT
CCACTGCAAAGTCAGAGCCAGCAGCCATCTGTTAGGACAGCTGAAAGGTGGCAAGAGGATTTGT
ATCTCAGTGGCCATGAATGTCTTCCACCCAGACAACGGAGAGACACGTGCAGCAGGCGACAGCA
GCTCTGTGAGGAGTATCGGTCAGGACCGAGCACTGAACAGCAAGCTCTGCTGCCATTTCAGTCT
GGAGTGGATCAAGAAGAAGACAAAAAAGAGCGTCAGAAGCAATATCTGAGACACAGAAGGATTT
TCATGGATATTGAAAGAGAACAAGTGAAAGAACAGAACAGACAAAGGGAGCAAAAGAGGAGGGC
TGAAAAAATTAAGAAAAGGAAAGAACAAGAGCGCTACGCTGAAGAGCAGAGACTCCTAAGAGTG
AACTGTCCTGAAGAACCTTGTTCAGAAGAGAACATAAGTGATGTGTTAGCTCAGTTACAGCTGC
AAGAAATAAAAGGAGCCAGAGAAAAACAGCAACAGAGAGAGAAAGAATATGTAAGATATGTAGA
AGCTTTACGAGCCCAGGTCCAGGAGAAAATGAAGCTTTATAATATCACTTTACCTCCGCTGTGC
TGTTGTGGTCCTGATTTTTGGGATGCTCATCCTGACACCTGTGCCAACAATTGCATTTTCTATA
AAAACTATAGAGCATATAATCGGGCATTGCATTCGGTCATCAATTCTTCTGATATCTCTGAGGG
GAACGCAACTCTTCGAAATGCCATTCGTAATTTTGCTTCTGCACATAGACGGAACTTCAAAACA
AAGTCTCCAGTAAGAGGATGAAGTCAGTGACGATGACTGGTAAAGAGTGTGAGCAGAATGCTAT
GTCATACAGAAAACCACAGGGCAGCCTGAAGCTATTGGAAGCTACCACAGTGTCCACGGTTCCA
GCCTTACAGTGCACCCAGTGCTACAGCCCTCCAAAGTCCTTTTCTCTACCCCAAGCAAGGCACA
TCAAGAGTTTGTTACTGTTGTTTTGTTTACCTTATAAGCTATAGATATGCTTTATGTCCACTTT
TCATATTTAGAGCCAATAATGATGCTCAGATCAACTCACAAACTAAACACATAATGCTAGAAAC
ATCTTCAACTGCCTTGTCATACCAAAAGCAAAATGCAAAGTAAGGAGAACACAAGAGCACCTTT
TCATTTTAAAGTGTTTGGAAACATGTACAACTTGGATACAATTTCAGGAGCTCCAGACACATAT
GTCCACTTCATGTAAACATAGATGCTTTGAGAAGCCACGGTGTGATTGGTCAGATTCTAAATTA
AACCCCTGAGGGCAATAGACACAGCTCAACTAAGATGTGTGGATCATGGTACTCCCCTCTTTAT
AGTGTTTGCAAGGAGATAGATAAACATTCTTAGTTGAGCATGGTGGTTCATGTCTTTAATCCCA
CTACTATGGAGGCTGATGCAGAAGGATTAAGAGTTTGAGGCCAGCTGAGCTGCATGAAACTGTC
TCAAAAATTTTTAACCCAAATAAAATAATTGTTTCTCCTTCTGCTTCTGTTGCTACTCCTCATC
TTCTTTCTCTTTCTTGTGAACAAATCAACAGGATCCTTTTTATTGTCAGATTTTCCCATCGATT
TGTACTTGGGACATCCTTCTCATAATTCTCCCTCTGCTTCACCACCTCACTGATGCAGGCCTGC
TTTTCTCTGTTACTTAAGCTGTTCACCATCTCACTCAACTGTTGTGTGTGCTTGTTTTAACAAC
ATTTACAAATAGAGACTCCCAGGATTTGTGGCTTTGATCTTGGGCCAGAATTCTGAATGCAGAC
AGAATGAAACAAGAATGCAGACAGTAGTCTGTGGCAGCCATAGTACCTGTGTCCTTCAGGCCTC
CTGGAAGATGGTCTGTAGTCCTTCATTTTCCAAATGGAGGGATTTTTATCCAATTTTGTCATTT
CATAATTTTAAATTTCCCTTCCCAGGCATTGTCTCCATTTCTTAGAGCACTATTGAGAAGGACT
GCAATATTGAGAAGGACATTGGCTCTTCTTGTGGTCGTCTCTGCCTGTCTACATAAAGAAGGCA
TAAGCAGCCTTAAGCCTTTGGTTTCTTGAGTCACTTTTAGTCATCCTGATCTATTGTTCTCTAG
GAAATGCAGAACACAGCACAAGGCTCCCTGCCCTCAAACTAGCTCTCCATGACAAGCAATTTTT
ATATAATTGTTACTAATTAAAAATGTTAACAATAAAACACAAGGAACCCATAATGCCAGTCACT
TTGGAGACTTCCTACTCTAAAAATCCCTTTCTAATCCTAGGTAACCATTAATCTTATTTTTTAA
TGTATAAATAAGCCTATATGTGATTCCTCTTATAAGTGGAATATACAGTATGAGCTCTTTTTGA
CTGAACTTCCTCAGTTAGCCTGATGCCAACACTCACCTGCATTGTCAGATTCATTGGTGTATTG
AATAGTACTGAGTAATCGTAACAATAAAACCATTTATTAATTTATCCTCTTAGGCATTTGGGGG
GTTTTCTACATGGCTCTTATGAATTCTGCTATGAGAATTGTTCTCGGGATTCTGTAGTACATGT
TTTCATTTCATGGTCTATGGGAGTGAGACTCTGGAGTCACATAGCAGCTTTGTGTTTCACTTTT
GACAAACTGTTTTCCAAAGGAGCCACACTACTTTTCATTCCCCAGAACATGTAAAGAAAGGCTC
AGCGTTCTTCACCAACATTCATCTCTTAGACAGGTGGTTGTGCTGTGGTATTTCATTGTGGTTT
TAAAATTCCTCCTAGCAGTTGATGTTGGTTATCTTTTTCATGTGCCTGTTGGCCGTGTGGGTCT
GTCTTTTGAAGATGCTAGTCAGATATTTTGCCAGCTTCATAATTGGGTTGTCTTTTTATTATGG
CATTATGTTGTAGAAATTTTAATCCTGATTTGGAATTTCTACATTGCCTTTGACCATTTAGCTC
CCAGATAAAA

hide sequence

RefSeq Acc Id:

XM_008766078 ⟹ XP_008764300

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	45,179,954 - 45,257,641 (-)	NCBI
mRatBN7.2	8	36,991,147 - 37,068,849 (-)	NCBI
Rnor_6.0	8	39,759,077 - 39,830,234 (-)	NCBI

Sequence:

show sequence

CCCAGCCCAGGATGCGTGACGAATGCGGAAGGGGCAGGGCAGGCCCGGTGTGTCAGTTTGCTGT
TTGTCCTTTGCGAAGCAGCCCGCGGAGTTTGAGTGTGAGAAGAAGTCAATGCCAGGAGGTATGA
CCCCCCTCAAGAAGCCTCGGAATCCCACAAAACTGCCCCTGACTTTAAACCCCACGAAGAGCAA
GGATGTTTTGGCAGTGCTGGCTGAGAGGAACCAGGCCATAGTACCAGTTGGGGCTTGGGTGGAA
CCTGCCTCACCAAATTGGTCGGGAATTCCAGCGCACACTTCAGCATACATACTTGAAGAGGAAA
TTAAGGAACAGCAGCGAAGGAAGCAAGAGTCTCTGAGACACTTTCAGAGACAAGTCAAACACCG
GGTCAATCAGCAGGCTAAGCTGAGGAAAAAGCAACAACTTGACAAGTCTTACAAAGCAGCAGAA
AAGGAAGGCTCTATAGCCATACGGTATTCAGACTCAGCACATTTAACTTCTAAAAGGACAAGTG
TTTTCCCTCGCAATCTGAATGCTGCTGTTGGAAGTTTTAGGTTACCCACTTCCCTGGTGCTTGG
TAATGCAACAGATGATGCAGAGAATCAGAATCAGTTGTTTGAACAACAAGCTCAAGCTCTTAGT
CAAACTATGAAGCAGGCACGTCACCAGCTGGCGTCCTTTAAAACTGTGAGTGAAAAAAAGACAT
CAGTGTTTCTAAATGGTGGAAAGAAAAGCTCTCCTACCCAAGAGGACCTTGGCTGTGGGAAAAT
TTCATCTGTTGTGGTAAGTGAGGAGAGAGACAATTTGTTTGAGAGCTGCCAGCAGGATCTCCTT
TCTGAAGACAAAGAAAAGGCTCTCAGCAAAGTTCAGAAAGTAAAATTCAAAAATCCATTATCTG
TTGTAATAAAGGAAGATGAAGGAAAGCAATTGTATCCCCATAGCCTTCAGCCTGTTCTTCCAGA
AGCCCAGGGTTATTTTGTAGAAGTTAAAAGCTGCCTTCCGGAATCTCAGAGTGATGTGATAGAT
GTCCAGGCTGTTGAGCCTAAAGCTTCAAGAATTGAACCTAAAGAGCCAGGTGGTGAGCCTGACA
CCCAGGCCGCTGGAATGGAGTTTCAGACCACAGAGCCAGACGGCCAGGCTGTGAAGACGGAAAT
TCAGGACACTCTTAAAGTCCAGACTGTTGAGCTAGACGGGGATACTGAGCTGGAAGCCCAGGAT
TCTCTACCCTCACACCAGGCCTTTCTATCCAGAGACCAAGATTTTCTGCTCAATTGTCAATACC
AGGGTTCTTTACCCAAAGATCACTGTGTTCTCCCTAATTACCAGAATGTTTTACCTAAATACCA
GGACCAGCATTTTCTACCTGTAGCCCAGGAATTTCTACCTACAAACCAACTTGCTTTACCCAAA
GAACAGAATCATCCACTCAAATGTCAGAAGCAGGATCTCCCACCTGAAGACCAGTTTCCCCTGC
CCAGACATCAGTATATTTTACCTATATATCAGGACCGAAGAGATCCACATGTTCTTCCTAAATG
TCAGGATCATGATGTTCTTTCCAAAGCCCAGAACTATCTACACAGTTATCAGGAGCAGGATCTT
CCACTGCAAAGTCAGAGCCAGCAGCCATCTGTTAGGACAGCTGAAAGGTGGCAAGAGGATTTGT
ATCTCAGTGGCCATGAATGTCTTCCACCCAGACAACGGAGAGACACGTGCAGCAGGCGACAGCA
GCTCTGTGAGGAGTATCGGTCAGGACCGAGCACTGAACAGCAAGCTCTGCTGCCATTTCAGTCT
GGAGTGGATCAAGAAGAAGACAAAAAAGAGCGTCAGAAGCAATATCTGAGACACAGAAGGATTT
TCATGGATATTGAAAGAGAACAAGTGAAAGAACAGAACAGACAAAGGGAGCAAAAGAGGAGGGC
TGAAAAAATTAAGAAAAGGAAAGAACAAGAGCGCTACGCTGAAGAGCAGAGACTCCTAAGAGTG
AACTGTCCTGAAGAACCTTGTTCAGAAGAGAACATAAGTGATGTGTTAGCTCAGTTACAGCTGC
AAGAAATAAAAGGAGCCAGAGAAAAACAGCAACAGAGAGAGAAAGAATATGTAAGATATGTAGA
AGCTTTACGAGCCCAGGTCCAGGAGAAAATGAAGCTTTATAATATCACTTTACCTCCGCTGTGC
TGTTGTGGTCCTGATTTTTGGGATGCTCATCCTGACACCTGTGCCAACAATTGCATTTTCTATA
AAAACTATAGAGCATATAATCGGGCATTGCATTCGGTCATCAATTCTTCTGATATCTCTGAGGG
GAACGCAACTCTTCGAAATGCCATTCGTAATTTTGCTTCTGCACATAGACGGAACTTCAAAACA
AAGTCTCCAGTAAGAGGATGAAGTAAAGAGTGTGAGCAGAATGCTATGTCATACAGAAAACCAC
AGGGCAGCCTGAAGCTATTGGAAGCTACCACAGTGTCCACGGTTCCAGCCTTACAGTGCACCCA
GTGCTACAGCCCTCCAAAGTCCTTTTCTCTACCCCAAGCAAGGCACATCAAGAGTTTGTTACTG
TTGTTTTGTTTACCTTATAAGCTATAGATATGCTTTATGTCCACTTTTCATATTTAGAGCCAAT
AATGATGCTCAGATCAACTCACAAACTAAACACATAATGCTAGAAACATCTTCAACTGCCTTGT
CATACCAAAAGCAAAATGCAAAGTAAGGAGAACACAAGAGCACCTTTTCATTTTAAAGTGTTTG
GAAACATGTACAACTTGGATACAATTTCAGGAGCTCCAGACACATATGTCCACTTCATGTAAAC
ATAGATGCTTTGAGAAGCCACGGTGTGATTGGTCAGATTCTAAATTAAACCCCTGAGGGCAATA
GACACAGCTCAACTAAGATGTGTGGATCATGGTACTCCCCTCTTTATAGTGTTTGCAAGGAGAT
AGATAAACATTCTTAGTTGAGCATGGTGGTTCATGTCTTTAATCCCACTACTATGGAGGCTGAT
GCAGAAGGATTAAGAGTTTGAGGCCAGCTGAGCTGCATGAAACTGTCTCAAAAATTTTTAACCC
AAATAAAATAATTGTTTCTCCTTCTGCTTCTGTTGCTACTCCTCATCTTCTTTCTCTTTCTTGT
GAACAAATCAACAGGATCCTTTTTATTGTCAGATTTTCCCATCGATTTGTACTTGGGACATCCT
TCTCATAATTCTCCCTCTGCTTCACCACCTCACTGATGCAGGCCTGCTTTTCTCTGTTACTTAA
GCTGTTCACCATCTCACTCAACTGTTGTGTGTGCTTGTTTTAACAACATTTACAAATAGAGACT
CCCAGGATTTGTGGCTTTGATCTTGGGCCAGAATTCTGAATGCAGACAGAATGAAACAAGAATG
CAGACAGTAGTCTGTGGCAGCCATAGTACCTGTGTCCTTCAGGCCTCCTGGAAGATGGTCTGTA
GTCCTTCATTTTCCAAATGGAGGGATTTTTATCCAATTTTGTCATTTCATAATTTTAAATTTCC
CTTCCCAGGCATTGTCTCCATTTCTTAGAGCACTATTGAGAAGGACTGCAATATTGAGAAGGAC
ATTGGCTCTTCTTGTGGTCGTCTCTGCCTGTCTACATAAAGAAGGCATAAGCAGCCTTAAGCCT
TTGGTTTCTTGAGTCACTTTTAGTCATCCTGATCTATTGTTCTCTAGGAAATGCAGAACACAGC
ACAAGGCTCCCTGCCCTCAAACTAGCTCTCCATGACAAGCAATTTTTATATAATTGTTACTAAT
TAAAAATGTTAACAATAAAACACAAGGAACCCATAATGCCAGTCACTTTGGAGACTTCCTACTC
TAAAAATCCCTTTCTAATCCTAGGTAACCATTAATCTTATTTTTTAATGTATAAATAAGCCTAT
ATGTGATTCCTCTTATAAGTGGAATATACAGTATGAGCTCTTTTTGACTGAACTTCCTCAGTTA
GCCTGATGCCAACACTCACCTGCATTGTCAGATTCATTGGTGTATTGAATAGTACTGAGTAATC
GTAACAATAAAACCATTTATTAATTTATCCTCTTAGGCATTTGGGGGGTTTTCTACATGGCTCT
TATGAATTCTGCTATGAGAATTGTTCTCGGGATTCTGTAGTACATGTTTTCATTTCATGGTCTA
TGGGAGTGAGACTCTGGAGTCACATAGCAGCTTTGTGTTTCACTTTTGACAAACTGTTTTCCAA
AGGAGCCACACTACTTTTCATTCCCCAGAACATGTAAAGAAAGGCTCAGCGTTCTTCACCAACA
TTCATCTCTTAGACAGGTGGTTGTGCTGTGGTATTTCATTGTGGTTTTAAAATTCCTCCTAGCA
GTTGATGTTGGTTATCTTTTTCATGTGCCTGTTGGCCGTGTGGGTCTGTCTTTTGAAGATGCTA
GTCAGATATTTTGCCAGCTTCATAATTGGGTTGTCTTTTTATTATGGCATTATGTTGTAGAAAT
TTTAATCCTGATTTGGAATTTCTACATTGCCTTTGACCATTTAGCTCCCAGATAAAA

hide sequence

RefSeq Acc Id:

XM_017596005 ⟹ XP_017451494

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	45,179,954 - 45,257,641 (-)	NCBI
mRatBN7.2	8	36,991,147 - 37,068,849 (-)	NCBI
Rnor_6.0	8	39,759,077 - 39,830,234 (-)	NCBI

Sequence:

show sequence

CCCAGCCCAGGATGCGTGACGAATGCGGAAGGGGCAGGGCAGGCCCGGTGTGTCAGTTTGCTGT
TTGTCCTTTGCGAAGCAGCCCGCGGAGTTTGAGTGTGAGAAGAAGTCAATGCCAGGAGGTATGA
CCCCCCTCAAGAAGCCTCGGAATCCCACAAAACTGCCCCTGACTTTAAACCCCACGAAGAGCAA
GGATGTTTTGGCAGTGCTGGCTGAGAGGAACCAGGCCATAGTACCAGTTGGGGCTTGGGTGGAA
CCTGCCTCACCAAATTGGTCGGGAATTCCAGCGCACACTTCAGCATACATACTTGAAGAGGAAA
TTAAGGAACAGCAGCGAAGGAAGCAAGAGTCTCTGAGACACTTTCAGAGACAAGTCAAACACCG
GGTCAATCAGCAGGCTAAGCTGAGGAAAAAGCAACAACTTGACAAGTCTTACAAAGCAGCAGAA
AAGGAAGGCTCTATAGCCATACGGTATTCAGACTCAGCACATTTAACTTCTAAAAGGACAAGTG
TTTTCCCTCGCAATCTGAATGCTGCTGTTGGAAGTTTTAGGTTACCCACTTCCCTGGTGCTTGG
TAATGCAACAGATGATGCAGAGAATCAGAATCAGTTGTTTGAACAACAAGCTCAAGCTCTTAGT
CAAACTATGAAGCAGGCACGTCACCAGCTGGCGTCCTTTAAAACTGTGAGTGAAAAAAAGACAT
CAGTGTTTCTAAATGGTGGAAAGAAAAGCTCTCCTACCCAAGAGGACCTTGGCTGTGGGAAAAT
TTCATCTGTTGTGGTAAGTGAGGAGAGAGACAATTTGTTTGAGAGCTGCCAGCAGGATCTCCTT
TCTGAAGACAAAGAAAAGGCTCTCAGCAAAGTTCAGAAAGTAAAATTCAAAAATCCATTATCTG
TTGTAATAAAGGAAGATGAAGGAAAGCAATTGTATCCCCATAGCCTTCAGCCTGTTCTTCCAGA
AGCCCAGGGTTATTTTGTAGAAGTTAAAAGCTGCCTTCCGGAATCTCAGAGTGATGTGATAGAT
GTCCAGGCTGTTGAGCCTAAAGCTTCAAGAATTGAACCTAAAGAGCCAGGTGGTGAGCCTGACA
CCCAGGCCGCTGGAATGGAGTTTCAGACCACAGAGCCAGACGGCCAGGCTGTGAAGACGGAAAT
TCAGGACACTCTTAAAGTCCAGACTGTTGAGCTAGACGGGGATACTGAGCTGGAAGCCCAGGAT
TCTCTACCCTCACACCAGGCCTTTCTATCCAGAGACCAAGATTTTCTGCTCAATTGTCAATACC
AGGGTTCTTTACCCAAAGATCACTGTGTTCTCCCTAATTACCAGAATGTTTTACCTAAATACCA
GGACCAGCATTTTCTACCTGTAGCCCAGGAATTTCTACCTACAAACCAACTTGCTTTACCCAAA
GAACAGAATCATCCACTCAAATGTCAGAAGCAGGATCTCCCACCTGAAGACCAGTTTCCCCTGC
CCAGACATCAGTATATTTTACCTATATATCAGGACCGAAGAGATCCACATGTTCTTCCTAAATG
TCAGGATCATGATGTTCTTTCCAAAGCCCAGAACTATCTACACAGTTATCAGGAGCAGGATCTT
CCACTGCAAAGTCAGAGCCAGCAGCCATCTGTTAGGACAGCTGAAAGGTGGCAAGAGGATTTGT
ATCTCAGTGGCCATGAATGTCTTCCACCCAGACAACGGAGAGACACGTGCAGCAGGCGACAGCT
CTGTGAGGAGTATCGGTCAGGACCGAGCACTGAACAGCAAGCTCTGCTGCCATTTCAGTCTGGA
GTGGATCAAGAAGAAGACAAAAAAGAGCGTCAGAAGCAATATCTGAGACACAGAAGGATTTTCA
TGGATATTGAAAGAGAACAAGTGAAAGAACAGAACAGACAAAGGGAGCAAAAGAGGAGGGCTGA
AAAAATTAAGAAAAGGAAAGAACAAGAGCGCTACGCTGAAGAGCAGAGACTCCTAAGAGTGAAC
TGTCCTGAAGAACCTTGTTCAGAAGAGAACATAAGTGATGTGTTAGCTCAGTTACAGCTGCAAG
AAATAAAAGGAGCCAGAGAAAAACAGCAACAGAGAGAGAAAGAATATGTAAGATATGTAGAAGC
TTTACGAGCCCAGGTCCAGGAGAAAATGAAGCTTTATAATATCACTTTACCTCCGCTGTGCTGT
TGTGGTCCTGATTTTTGGGATGCTCATCCTGACACCTGTGCCAACAATTGCATTTTCTATAAAA
ACTATAGAGCATATAATCGGGCATTGCATTCGGTCATCAATTCTTCTGATATCTCTGAGGGGAA
CGCAACTCTTCGAAATGCCATTCGTAATTTTGCTTCTGCACATAGACGGAACTTCAAAACAAAG
TCTCCAGTAAGAGGATGAAGTCAGTGACGATGACTGGTAAAGAGTGTGAGCAGAATGCTATGTC
ATACAGAAAACCACAGGGCAGCCTGAAGCTATTGGAAGCTACCACAGTGTCCACGGTTCCAGCC
TTACAGTGCACCCAGTGCTACAGCCCTCCAAAGTCCTTTTCTCTACCCCAAGCAAGGCACATCA
AGAGTTTGTTACTGTTGTTTTGTTTACCTTATAAGCTATAGATATGCTTTATGTCCACTTTTCA
TATTTAGAGCCAATAATGATGCTCAGATCAACTCACAAACTAAACACATAATGCTAGAAACATC
TTCAACTGCCTTGTCATACCAAAAGCAAAATGCAAAGTAAGGAGAACACAAGAGCACCTTTTCA
TTTTAAAGTGTTTGGAAACATGTACAACTTGGATACAATTTCAGGAGCTCCAGACACATATGTC
CACTTCATGTAAACATAGATGCTTTGAGAAGCCACGGTGTGATTGGTCAGATTCTAAATTAAAC
CCCTGAGGGCAATAGACACAGCTCAACTAAGATGTGTGGATCATGGTACTCCCCTCTTTATAGT
GTTTGCAAGGAGATAGATAAACATTCTTAGTTGAGCATGGTGGTTCATGTCTTTAATCCCACTA
CTATGGAGGCTGATGCAGAAGGATTAAGAGTTTGAGGCCAGCTGAGCTGCATGAAACTGTCTCA
AAAATTTTTAACCCAAATAAAATAATTGTTTCTCCTTCTGCTTCTGTTGCTACTCCTCATCTTC
TTTCTCTTTCTTGTGAACAAATCAACAGGATCCTTTTTATTGTCAGATTTTCCCATCGATTTGT
ACTTGGGACATCCTTCTCATAATTCTCCCTCTGCTTCACCACCTCACTGATGCAGGCCTGCTTT
TCTCTGTTACTTAAGCTGTTCACCATCTCACTCAACTGTTGTGTGTGCTTGTTTTAACAACATT
TACAAATAGAGACTCCCAGGATTTGTGGCTTTGATCTTGGGCCAGAATTCTGAATGCAGACAGA
ATGAAACAAGAATGCAGACAGTAGTCTGTGGCAGCCATAGTACCTGTGTCCTTCAGGCCTCCTG
GAAGATGGTCTGTAGTCCTTCATTTTCCAAATGGAGGGATTTTTATCCAATTTTGTCATTTCAT
AATTTTAAATTTCCCTTCCCAGGCATTGTCTCCATTTCTTAGAGCACTATTGAGAAGGACTGCA
ATATTGAGAAGGACATTGGCTCTTCTTGTGGTCGTCTCTGCCTGTCTACATAAAGAAGGCATAA
GCAGCCTTAAGCCTTTGGTTTCTTGAGTCACTTTTAGTCATCCTGATCTATTGTTCTCTAGGAA
ATGCAGAACACAGCACAAGGCTCCCTGCCCTCAAACTAGCTCTCCATGACAAGCAATTTTTATA
TAATTGTTACTAATTAAAAATGTTAACAATAAAACACAAGGAACCCATAATGCCAGTCACTTTG
GAGACTTCCTACTCTAAAAATCCCTTTCTAATCCTAGGTAACCATTAATCTTATTTTTTAATGT
ATAAATAAGCCTATATGTGATTCCTCTTATAAGTGGAATATACAGTATGAGCTCTTTTTGACTG
AACTTCCTCAGTTAGCCTGATGCCAACACTCACCTGCATTGTCAGATTCATTGGTGTATTGAAT
AGTACTGAGTAATCGTAACAATAAAACCATTTATTAATTTATCCTCTTAGGCATTTGGGGGGTT
TTCTACATGGCTCTTATGAATTCTGCTATGAGAATTGTTCTCGGGATTCTGTAGTACATGTTTT
CATTTCATGGTCTATGGGAGTGAGACTCTGGAGTCACATAGCAGCTTTGTGTTTCACTTTTGAC
AAACTGTTTTCCAAAGGAGCCACACTACTTTTCATTCCCCAGAACATGTAAAGAAAGGCTCAGC
GTTCTTCACCAACATTCATCTCTTAGACAGGTGGTTGTGCTGTGGTATTTCATTGTGGTTTTAA
AATTCCTCCTAGCAGTTGATGTTGGTTATCTTTTTCATGTGCCTGTTGGCCGTGTGGGTCTGTC
TTTTGAAGATGCTAGTCAGATATTTTGCCAGCTTCATAATTGGGTTGTCTTTTTATTATGGCAT
TATGTTGTAGAAATTTTAATCCTGATTTGGAATTTCTACATTGCCTTTGACCATTTAGCTCCCA
GATAAAA

hide sequence

RefSeq Acc Id:

XM_017596006 ⟹ XP_017451495

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	45,179,954 - 45,257,641 (-)	NCBI
mRatBN7.2	8	36,991,147 - 37,068,849 (-)	NCBI
Rnor_6.0	8	39,759,077 - 39,830,235 (-)	NCBI

Sequence:

show sequence

TCCCAGCCCAGGATGCGTGACGAATGCGGAAGGGGCAGGGCAGGCCCGGTGTGTCAGTTTGCTG
TTTGTCCTTTGCGAAGCAGCCCGCGGAGTTTGAGTGTGAGAAGAAGTCAATGCCAGGAGGTATG
ACCCCCCTCAAGAAGCCTCGGAATCCCACAAAACTGCCCCTGACTTTAAACCCCACGAAGAGCA
AGGATGTTTTGGCAGTGCTGGCTGAGAGGAACCAGGCCATAGTACCAGTTGGGGCTTGGGTGGA
ACCTGCCTCACCAAATTGGTCGGGAATTCCAGCGCACACTTCAGCATACATACTTGAAGAGGAA
ATTAAGGAACAGCAGCGAAGGAAGCAAGAGTCTCTGAGACACTTTCAGAGACAAGTCAAACACC
GGGTCAATCAGCAGGCTAAGCTGAGGAAAAAGCAACAACTTGACAAGTCTTACAAAGCAGCAGA
AAAGGAAGGCTCTATAGCCATACGGTATTCAGACTCAGCACATTTAACTTCTAAAAGGACAAGT
GTTTTCCCTCGCAATCTGAATGCTGCTGTTGGAAGTTTTAGGTTACCCACTTCCCTGGTGCTTG
GTAATGCAACAGATGATGCAGAGAATCAGAATCAGTTGTTTGAACAACAAGCTCAAGCTCTTAG
TCAAACTATGAAGCAGGCACGTCACCAGCTGGCGTCCTTTAAAACTGTGAGTGAAAAAAAGACA
TCAGTGTTTCTAAATGGTGGAAAGAAAAGCTCTCCTACCCAAGAGGACCTTGGCTGTGGGAAAA
TTTCATCTGTTGTGGTAAGTGAGGAGAGAGACAATTTGTTTGAGAGCTGCCAGCAGGATCTCCT
TTCTGAAGACAAAGAAAAGGCTCTCAGCAAAGTTCAGAAAGTAAAATTCAAAAATCCATTATCT
GTTGTAATAAAGGAAGATGAAGGAAAGCAATTGTATCCCCATAGCCTTCAGCCTGTTCTTCCAG
AAGCCCAGGGTTATTTTGTAGAAGTTAAAAGCTGCCTTCCGGAATCTCAGAGTGATGTGATAGA
TGTCCAGGCTGTTGAGCCTAAAGCTTCAAGAATTGAACCTAAAGAGCCAGGTGGTGAGCCTGAC
ACCCAGGCCGCTGGAATGGAGTTTCAGACCACAGAGCCAGACGGCCAGGCTGTGAAGACGGAAA
TTCAGGACACTCTTAAAGTCCAGACTGTTGAGCTAGACGGGGATACTGAGCTGGAAGCCCAGGA
TTCTCTACCCTCACACCAGGCCTTTCTATCCAGAGACCAAGATTTTCTGCTCAATTGTCAATAC
CAGGGTTCTTTACCCAAAGATCACTGTGTTCTCCCTAATTACCAGAATGTTTTACCTAAATACC
AGGACCAGCATTTTCTACCTGTAGCCCAGGAATTTCTACCTACAAACCAACTTGCTTTACCCAA
AGAACAGAATCATCCACTCAAATGTCAGAAGCAGGATCTCCCACCTGAAGACCAGTTTCCCCTG
CCCAGACATCAGTATATTTTACCTATATATCAGGACCGAAGAGATCCACATGTTCTTCCTAAAT
GTCAGGATCATGATGTTCTTTCCAAAGCCCAGAACTATCTACACAGTTATCAGGAGCAGGATCT
TCCACTGCAAAGTCAGCAGCTCTGTGAGGAGTATCGGTCAGGACCGAGCACTGAACAGCAAGCT
CTGCTGCCATTTCAGTCTGGAGTGGATCAAGAAGAAGACAAAAAAGAGCGTCAGAAGCAATATC
TGAGACACAGAAGGATTTTCATGGATATTGAAAGAGAACAAGTGAAAGAACAGAACAGACAAAG
GGAGCAAAAGAGGAGGGCTGAAAAAATTAAGAAAAGGAAAGAACAAGAGCGCTACGCTGAAGAG
CAGAGACTCCTAAGAGTGAACTGTCCTGAAGAACCTTGTTCAGAAGAGAACATAAGTGATGTGT
TAGCTCAGTTACAGCTGCAAGAAATAAAAGGAGCCAGAGAAAAACAGCAACAGAGAGAGAAAGA
ATATGTAAGATATGTAGAAGCTTTACGAGCCCAGGTCCAGGAGAAAATGAAGCTTTATAATATC
ACTTTACCTCCGCTGTGCTGTTGTGGTCCTGATTTTTGGGATGCTCATCCTGACACCTGTGCCA
ACAATTGCATTTTCTATAAAAACTATAGAGCATATAATCGGGCATTGCATTCGGTCATCAATTC
TTCTGATATCTCTGAGGGGAACGCAACTCTTCGAAATGCCATTCGTAATTTTGCTTCTGCACAT
AGACGGAACTTCAAAACAAAGTCTCCAGTAAGAGGATGAAGTCAGTGACGATGACTGGTAAAGA
GTGTGAGCAGAATGCTATGTCATACAGAAAACCACAGGGCAGCCTGAAGCTATTGGAAGCTACC
ACAGTGTCCACGGTTCCAGCCTTACAGTGCACCCAGTGCTACAGCCCTCCAAAGTCCTTTTCTC
TACCCCAAGCAAGGCACATCAAGAGTTTGTTACTGTTGTTTTGTTTACCTTATAAGCTATAGAT
ATGCTTTATGTCCACTTTTCATATTTAGAGCCAATAATGATGCTCAGATCAACTCACAAACTAA
ACACATAATGCTAGAAACATCTTCAACTGCCTTGTCATACCAAAAGCAAAATGCAAAGTAAGGA
GAACACAAGAGCACCTTTTCATTTTAAAGTGTTTGGAAACATGTACAACTTGGATACAATTTCA
GGAGCTCCAGACACATATGTCCACTTCATGTAAACATAGATGCTTTGAGAAGCCACGGTGTGAT
TGGTCAGATTCTAAATTAAACCCCTGAGGGCAATAGACACAGCTCAACTAAGATGTGTGGATCA
TGGTACTCCCCTCTTTATAGTGTTTGCAAGGAGATAGATAAACATTCTTAGTTGAGCATGGTGG
TTCATGTCTTTAATCCCACTACTATGGAGGCTGATGCAGAAGGATTAAGAGTTTGAGGCCAGCT
GAGCTGCATGAAACTGTCTCAAAAATTTTTAACCCAAATAAAATAATTGTTTCTCCTTCTGCTT
CTGTTGCTACTCCTCATCTTCTTTCTCTTTCTTGTGAACAAATCAACAGGATCCTTTTTATTGT
CAGATTTTCCCATCGATTTGTACTTGGGACATCCTTCTCATAATTCTCCCTCTGCTTCACCACC
TCACTGATGCAGGCCTGCTTTTCTCTGTTACTTAAGCTGTTCACCATCTCACTCAACTGTTGTG
TGTGCTTGTTTTAACAACATTTACAAATAGAGACTCCCAGGATTTGTGGCTTTGATCTTGGGCC
AGAATTCTGAATGCAGACAGAATGAAACAAGAATGCAGACAGTAGTCTGTGGCAGCCATAGTAC
CTGTGTCCTTCAGGCCTCCTGGAAGATGGTCTGTAGTCCTTCATTTTCCAAATGGAGGGATTTT
TATCCAATTTTGTCATTTCATAATTTTAAATTTCCCTTCCCAGGCATTGTCTCCATTTCTTAGA
GCACTATTGAGAAGGACTGCAATATTGAGAAGGACATTGGCTCTTCTTGTGGTCGTCTCTGCCT
GTCTACATAAAGAAGGCATAAGCAGCCTTAAGCCTTTGGTTTCTTGAGTCACTTTTAGTCATCC
TGATCTATTGTTCTCTAGGAAATGCAGAACACAGCACAAGGCTCCCTGCCCTCAAACTAGCTCT
CCATGACAAGCAATTTTTATATAATTGTTACTAATTAAAAATGTTAACAATAAAACACAAGGAA
CCCATAATGCCAGTCACTTTGGAGACTTCCTACTCTAAAAATCCCTTTCTAATCCTAGGTAACC
ATTAATCTTATTTTTTAATGTATAAATAAGCCTATATGTGATTCCTCTTATAAGTGGAATATAC
AGTATGAGCTCTTTTTGACTGAACTTCCTCAGTTAGCCTGATGCCAACACTCACCTGCATTGTC
AGATTCATTGGTGTATTGAATAGTACTGAGTAATCGTAACAATAAAACCATTTATTAATTTATC
CTCTTAGGCATTTGGGGGGTTTTCTACATGGCTCTTATGAATTCTGCTATGAGAATTGTTCTCG
GGATTCTGTAGTACATGTTTTCATTTCATGGTCTATGGGAGTGAGACTCTGGAGTCACATAGCA
GCTTTGTGTTTCACTTTTGACAAACTGTTTTCCAAAGGAGCCACACTACTTTTCATTCCCCAGA
ACATGTAAAGAAAGGCTCAGCGTTCTTCACCAACATTCATCTCTTAGACAGGTGGTTGTGCTGT
GGTATTTCATTGTGGTTTTAAAATTCCTCCTAGCAGTTGATGTTGGTTATCTTTTTCATGTGCC
TGTTGGCCGTGTGGGTCTGTCTTTTGAAGATGCTAGTCAGATATTTTGCCAGCTTCATAATTGG
GTTGTCTTTTTATTATGGCATTATGTTGTAGAAATTTTAATCCTGATTTGGAATTTCTACATTG
CCTTTGACCATTTAGCTCCCAGATAAAA

hide sequence

RefSeq Acc Id:

XM_039082303 ⟹ XP_038938231

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	45,179,954 - 45,250,460 (-)	NCBI
mRatBN7.2	8	36,991,147 - 37,061,664 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_001178841	(Get FASTA)	NCBI Sequence Viewer
	XP_006242877	(Get FASTA)	NCBI Sequence Viewer
	XP_008764300	(Get FASTA)	NCBI Sequence Viewer
	XP_017451494	(Get FASTA)	NCBI Sequence Viewer
	XP_017451495	(Get FASTA)	NCBI Sequence Viewer
	XP_038938231	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000051047.5
	ENSRNOP00000051521
	ENSRNOP00000051521.6
	ENSRNOP00000073837.2
	ENSRNOP00000107303.1
	ENSRNOP00000109612
	ENSRNOP00000109612.1

RefSeq Acc Id:

XP_006242877 ⟸ XM_006242815

- Peptide Label:

isoform X1

- Sequence:

show sequence

MRKGQGRPGVSVCCLSFAKQPAEFECEKKSMPGGMTPLKKPRNPTKLPLTLNPTKSKDVLAVLA
ERNQAIVPVGAWVEPASPNWSGIPAHTSAYILEEEIKEQQRRKQESLRHFQRQVKHRVNQQAKL
RKKQQLDKSYKAAEKEGSIAIRYSDSAHLTSKRTSVFPRNLNAAVGSFRLPTSLVLGNATDDAE
NQNQLFEQQAQALSQTMKQARHQLASFKTVSEKKTSVFLNGGKKSSPTQEDLGCGKISSVVVSE
ERDNLFESCQQDLLSEDKEKALSKVQKVKFKNPLSVVIKEDEGKQLYPHSLQPVLPEAQGYFVE
VKSCLPESQSDVIDVQAVEPKASRIEPKEPGGEPDTQAAGMEFQTTEPDGQAVKTEIQDTLKVQ
TVELDGDTELEAQDSLPSHQAFLSRDQDFLLNCQYQGSLPKDHCVLPNYQNVLPKYQDQHFLPV
AQEFLPTNQLALPKEQNHPLKCQKQDLPPEDQFPLPRHQYILPIYQDRRDPHVLPKCQDHDVLS
KAQNYLHSYQEQDLPLQSQSQQPSVRTAERWQEDLYLSGHECLPPRQRRDTCSRRQQLCEEYRS
GPSTEQQALLPFQSGVDQEEDKKERQKQYLRHRRIFMDIEREQVKEQNRQREQKRRAEKIKKRK
EQERYAEEQRLLRVNCPEEPCSEENISDVLAQLQLQEIKGAREKQQQREKEYVRYVEALRAQVQ
EKMKLYNITLPPLCCCGPDFWDAHPDTCANNCIFYKNYRAYNRALHSVINSSDISEGNATLRNA
IRNFASAHRRNFKTKSPVRG

hide sequence

RefSeq Acc Id:

XP_008764300 ⟸ XM_008766078

- Peptide Label:

isoform X1

- Sequence:

show sequence

MRKGQGRPGVSVCCLSFAKQPAEFECEKKSMPGGMTPLKKPRNPTKLPLTLNPTKSKDVLAVLA
ERNQAIVPVGAWVEPASPNWSGIPAHTSAYILEEEIKEQQRRKQESLRHFQRQVKHRVNQQAKL
RKKQQLDKSYKAAEKEGSIAIRYSDSAHLTSKRTSVFPRNLNAAVGSFRLPTSLVLGNATDDAE
NQNQLFEQQAQALSQTMKQARHQLASFKTVSEKKTSVFLNGGKKSSPTQEDLGCGKISSVVVSE
ERDNLFESCQQDLLSEDKEKALSKVQKVKFKNPLSVVIKEDEGKQLYPHSLQPVLPEAQGYFVE
VKSCLPESQSDVIDVQAVEPKASRIEPKEPGGEPDTQAAGMEFQTTEPDGQAVKTEIQDTLKVQ
TVELDGDTELEAQDSLPSHQAFLSRDQDFLLNCQYQGSLPKDHCVLPNYQNVLPKYQDQHFLPV
AQEFLPTNQLALPKEQNHPLKCQKQDLPPEDQFPLPRHQYILPIYQDRRDPHVLPKCQDHDVLS
KAQNYLHSYQEQDLPLQSQSQQPSVRTAERWQEDLYLSGHECLPPRQRRDTCSRRQQLCEEYRS
GPSTEQQALLPFQSGVDQEEDKKERQKQYLRHRRIFMDIEREQVKEQNRQREQKRRAEKIKKRK
EQERYAEEQRLLRVNCPEEPCSEENISDVLAQLQLQEIKGAREKQQQREKEYVRYVEALRAQVQ
EKMKLYNITLPPLCCCGPDFWDAHPDTCANNCIFYKNYRAYNRALHSVINSSDISEGNATLRNA
IRNFASAHRRNFKTKSPVRG

hide sequence

RefSeq Acc Id:

XP_017451495 ⟸ XM_017596006

- Peptide Label:

isoform X3

- Sequence:

show sequence

MRKGQGRPGVSVCCLSFAKQPAEFECEKKSMPGGMTPLKKPRNPTKLPLTLNPTKSKDVLAVLA
ERNQAIVPVGAWVEPASPNWSGIPAHTSAYILEEEIKEQQRRKQESLRHFQRQVKHRVNQQAKL
RKKQQLDKSYKAAEKEGSIAIRYSDSAHLTSKRTSVFPRNLNAAVGSFRLPTSLVLGNATDDAE
NQNQLFEQQAQALSQTMKQARHQLASFKTVSEKKTSVFLNGGKKSSPTQEDLGCGKISSVVVSE
ERDNLFESCQQDLLSEDKEKALSKVQKVKFKNPLSVVIKEDEGKQLYPHSLQPVLPEAQGYFVE
VKSCLPESQSDVIDVQAVEPKASRIEPKEPGGEPDTQAAGMEFQTTEPDGQAVKTEIQDTLKVQ
TVELDGDTELEAQDSLPSHQAFLSRDQDFLLNCQYQGSLPKDHCVLPNYQNVLPKYQDQHFLPV
AQEFLPTNQLALPKEQNHPLKCQKQDLPPEDQFPLPRHQYILPIYQDRRDPHVLPKCQDHDVLS
KAQNYLHSYQEQDLPLQSQQLCEEYRSGPSTEQQALLPFQSGVDQEEDKKERQKQYLRHRRIFM
DIEREQVKEQNRQREQKRRAEKIKKRKEQERYAEEQRLLRVNCPEEPCSEENISDVLAQLQLQE
IKGAREKQQQREKEYVRYVEALRAQVQEKMKLYNITLPPLCCCGPDFWDAHPDTCANNCIFYKN
YRAYNRALHSVINSSDISEGNATLRNAIRNFASAHRRNFKTKSPVRG

hide sequence

RefSeq Acc Id:

XP_017451494 ⟸ XM_017596005

- Peptide Label:

isoform X2

- Sequence:

show sequence

MRKGQGRPGVSVCCLSFAKQPAEFECEKKSMPGGMTPLKKPRNPTKLPLTLNPTKSKDVLAVLA
ERNQAIVPVGAWVEPASPNWSGIPAHTSAYILEEEIKEQQRRKQESLRHFQRQVKHRVNQQAKL
RKKQQLDKSYKAAEKEGSIAIRYSDSAHLTSKRTSVFPRNLNAAVGSFRLPTSLVLGNATDDAE
NQNQLFEQQAQALSQTMKQARHQLASFKTVSEKKTSVFLNGGKKSSPTQEDLGCGKISSVVVSE
ERDNLFESCQQDLLSEDKEKALSKVQKVKFKNPLSVVIKEDEGKQLYPHSLQPVLPEAQGYFVE
VKSCLPESQSDVIDVQAVEPKASRIEPKEPGGEPDTQAAGMEFQTTEPDGQAVKTEIQDTLKVQ
TVELDGDTELEAQDSLPSHQAFLSRDQDFLLNCQYQGSLPKDHCVLPNYQNVLPKYQDQHFLPV
AQEFLPTNQLALPKEQNHPLKCQKQDLPPEDQFPLPRHQYILPIYQDRRDPHVLPKCQDHDVLS
KAQNYLHSYQEQDLPLQSQSQQPSVRTAERWQEDLYLSGHECLPPRQRRDTCSRRQLCEEYRSG
PSTEQQALLPFQSGVDQEEDKKERQKQYLRHRRIFMDIEREQVKEQNRQREQKRRAEKIKKRKE
QERYAEEQRLLRVNCPEEPCSEENISDVLAQLQLQEIKGAREKQQQREKEYVRYVEALRAQVQE
KMKLYNITLPPLCCCGPDFWDAHPDTCANNCIFYKNYRAYNRALHSVINSSDISEGNATLRNAI
RNFASAHRRNFKTKSPVRG

hide sequence

Ensembl Acc Id:

ENSRNOP00000051521 ⟸ ENSRNOT00000040901

RefSeq Acc Id:	XP_038938231 ⟸ XM_039082303
- Peptide Label:	isoform X4

RefSeq Acc Id:	NP_001178841 ⟸ NM_001191912
- UniProtKB:	D3ZRD2 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000107303 ⟸ ENSRNOT00000126302

Ensembl Acc Id:

ENSRNOP00000073837 ⟸ ENSRNOT00000089662

Ensembl Acc Id:

ENSRNOP00000109612 ⟸ ENSRNOT00000173703

Ensembl Acc Id:

ENSRNOP00000093063 ⟸ ENSRNOT00000115568

Ensembl Acc Id:

ENSRNOP00000068265 ⟸ ENSRNOT00000076872

Ensembl Acc Id:

ENSRNOP00000051047 ⟸ ENSRNOT00000040106

Protein Domains

Major facilitator superfamily (MFS) profile

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-D3ZRD2-F1-model_v2	AlphaFold	D3ZRD2	1-758	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1305591	AgrOrtholog
BioCyc Gene	G2FUF-31091	BioCyc
Ensembl Genes	ENSRNOG00000032180	Ensembl
	ENSRNOG00000039390	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000040106.5	UniProtKB/TrEMBL
	ENSRNOT00000040901	ENTREZGENE
	ENSRNOT00000040901.8	UniProtKB/TrEMBL
	ENSRNOT00000089662.3	UniProtKB/TrEMBL
	ENSRNOT00000126302.1	UniProtKB/TrEMBL
	ENSRNOT00000173703	ENTREZGENE
	ENSRNOT00000173703.1	UniProtKB/TrEMBL
Gene3D-CATH	MFS general substrate transporter like domains	UniProtKB/TrEMBL
InterPro	CCDC15	UniProtKB/TrEMBL
	MFS	UniProtKB/TrEMBL
	MFS_dom	UniProtKB/TrEMBL
	MFS_trans_sf	UniProtKB/TrEMBL
	SLC37A1_2	UniProtKB/TrEMBL
	Sugar_P_transporter	UniProtKB/TrEMBL
NCBI Gene	367056	ENTREZGENE
PANTHER	COILED-COIL DOMAIN-CONTAINING PROTEIN 15	UniProtKB/TrEMBL
	GLUCOSE-6-PHOSPHATE EXCHANGER SLC37A2	UniProtKB/TrEMBL
	MAJOR FACILITATOR SUPERFAMILY TRANSPORTER 16, ISOFORM B	UniProtKB/TrEMBL
	PTHR14817	UniProtKB/TrEMBL
Pfam	MFS_1	UniProtKB/TrEMBL
PhenoGen	Ccdc15	PhenoGen
PIRSF	Hexose_phosphate_transp	UniProtKB/TrEMBL
PROSITE	MFS	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000032180	RatGTEx
	ENSRNOG00000039390	RatGTEx
Superfamily-SCOP	MFS general substrate transporter	UniProtKB/TrEMBL
UniProt	A0A0G2K6J4_RAT	UniProtKB/TrEMBL
	A0ABK0LFP4_RAT	UniProtKB/TrEMBL
	A0ABK0LNH3_RAT	UniProtKB/TrEMBL
	D3ZRD2	ENTREZGENE, UniProtKB/TrEMBL
	D3ZS16_RAT	UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2008-03-07	Ccdc15	coiled-coil domain containing 15	Slc37a2_predicted	solute carrier family 37 (glycerol-3-phosphate transporter), member 2 (predicted)	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2005-01-12	Slc37a2_predicted	solute carrier family 37 (glycerol-3-phosphate transporter), member 2 (predicted)			Symbol and Name status set to approved	70820	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar