Pkmyt1 (protein kinase, membrane associated tyrosine/threonine 1) - Rat Genome Database

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Gene: Pkmyt1 (protein kinase, membrane associated tyrosine/threonine 1) Rattus norvegicus
Analyze
Symbol: Pkmyt1
Name: protein kinase, membrane associated tyrosine/threonine 1
RGD ID: 1305434
Description: Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in meiotic cell cycle; negative regulation of G2/M transition of mitotic cell cycle; and negative regulation of G2/MI transition of meiotic cell cycle. Predicted to be located in Golgi apparatus; nucleolus; and nucleoplasm. Predicted to be active in cytoplasm and nucleus. Orthologous to human PKMYT1 (protein kinase, membrane associated tyrosine/threonine 1); PARTICIPATES IN cell cycle pathway, mitotic; INTERACTS WITH 1-naphthyl isothiocyanate; 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: LOC287101; membrane-associated tyrosine- and threonine-specific cdc2-inhibitory kinase; RGD1305434; similar to membrane-associated tyrosine-and threonine-specific cdc2-inhibitory kinase
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81013,252,805 - 13,263,584 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1013,252,816 - 13,264,263 (+)EnsemblGRCr8
mRatBN7.21012,748,221 - 12,758,995 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1012,748,237 - 12,758,995 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1017,492,526 - 17,503,316 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01016,981,319 - 16,992,106 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01012,480,898 - 12,491,719 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Dahl_SR_JrHsd1016,176,527 - 16,187,360 (+)NCBIDahl_SR_JrHsd
Lyon_Normotensive1016,836,235 - 16,847,059 (+)NCBILyon_Normotensive
Lyon_Hypertensive1018,529,857 - 18,540,683 (+)NCBILyon_Hypertensive
F344_StmMcwi1018,520,769 - 18,531,591 (+)NCBIF344_StmMcwi
Rnor_6.01013,061,077 - 13,072,277 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1013,061,170 - 13,073,283 (+)Ensemblrn6Rnor6.0
Rnor_5.01012,880,557 - 12,891,739 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41012,982,319 - 12,993,706 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1012,443,567 - 12,454,296 (+)NCBICelera
RGSC_v3.11012,982,318 - 12,993,697 (+)NCBI
Cytogenetic Map10q12NCBI
JBrowse:




Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(1->4)-beta-D-glucan  (ISO)
1,2-dichloroethane  (ISO)
1-naphthyl isothiocyanate  (EXP)
17beta-estradiol  (EXP)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,6-dinitrotoluene  (EXP)
3,4-methylenedioxymethamphetamine  (ISO)
4,4'-sulfonyldiphenol  (ISO)
4-(ethoxymethylene)-2-phenyloxazol-5-one  (ISO)
4-hydroxyphenyl retinamide  (ISO)
6-propyl-2-thiouracil  (EXP)
acetamide  (EXP)
acrylamide  (EXP,ISO)
aflatoxin B1  (EXP,ISO)
all-trans-retinoic acid  (ISO)
alpha-amanitin  (ISO)
apigenin  (ISO)
aristolochic acid A  (ISO)
arsenous acid  (ISO)
benzo[a]pyrene  (ISO)
benzo[a]pyrene diol epoxide I  (ISO)
bis(2-ethylhexyl) phthalate  (EXP,ISO)
bisphenol A  (EXP,ISO)
Bufotalin  (ISO)
cadmium atom  (ISO)
cadmium dichloride  (ISO)
caffeine  (ISO)
calcitriol  (ISO)
cannabidiol  (ISO)
cefaloridine  (EXP)
chlorpyrifos  (ISO)
chromium(6+)  (ISO)
cisplatin  (ISO)
cobalt dichloride  (EXP)
copper atom  (ISO)
copper(0)  (ISO)
copper(II) chloride  (ISO)
copper(II) sulfate  (ISO)
coumestrol  (ISO)
cylindrospermopsin  (ISO)
cypermethrin  (ISO)
DDE  (ISO)
diarsenic trioxide  (ISO)
Dibutyl phosphate  (ISO)
dioxygen  (ISO)
Echimidine  (ISO)
endosulfan  (EXP)
Enterolactone  (ISO)
FR900359  (ISO)
furan  (EXP)
genistein  (EXP)
gentamycin  (EXP)
geraniol  (ISO)
glycidol  (EXP)
hypochlorous acid  (ISO)
lead diacetate  (ISO)
methylparaben  (ISO)
monocrotaline  (ISO)
ochratoxin A  (ISO)
okadaic acid  (ISO)
ozone  (ISO)
paracetamol  (EXP,ISO)
paraquat  (ISO)
perfluorooctane-1-sulfonic acid  (ISO)
perfluorooctanoic acid  (ISO)
phenobarbital  (ISO)
pirinixic acid  (ISO)
pregnenolone 16alpha-carbonitrile  (ISO)
quercetin  (ISO)
resveratrol  (ISO)
riddelliine  (ISO)
saracatinib  (ISO)
simvastatin  (ISO)
sodium arsenate  (ISO)
sodium arsenite  (ISO)
sunitinib  (ISO)
tacrolimus hydrate  (ISO)
testosterone  (ISO)
thapsigargin  (ISO)
thioacetamide  (EXP)
titanium dioxide  (ISO)
toluene 2,4-diisocyanate  (ISO)
trichloroethene  (EXP)
triclosan  (ISO)
trimellitic anhydride  (ISO)
troglitazone  (ISO)
trovafloxacin  (ISO)
tunicamycin  (ISO)
valproic acid  (ISO)
zidovudine  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
cytoplasm  (IBA,IEA,ISO)
Golgi apparatus  (IEA,ISO)
Golgi membrane  (IEA)
nucleus  (IBA,IEA,ISO)

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
3. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
4. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
5. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:9268380   PMID:12477932   PMID:19389623   PMID:19946888   PMID:20083600  


Genomics

Comparative Map Data
Pkmyt1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81013,252,805 - 13,263,584 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1013,252,816 - 13,264,263 (+)EnsemblGRCr8
mRatBN7.21012,748,221 - 12,758,995 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1012,748,237 - 12,758,995 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1017,492,526 - 17,503,316 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01016,981,319 - 16,992,106 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01012,480,898 - 12,491,719 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Dahl_SR_JrHsd1016,176,527 - 16,187,360 (+)NCBIDahl_SR_JrHsd
Lyon_Normotensive1016,836,235 - 16,847,059 (+)NCBILyon_Normotensive
Lyon_Hypertensive1018,529,857 - 18,540,683 (+)NCBILyon_Hypertensive
F344_StmMcwi1018,520,769 - 18,531,591 (+)NCBIF344_StmMcwi
Rnor_6.01013,061,077 - 13,072,277 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1013,061,170 - 13,073,283 (+)Ensemblrn6Rnor6.0
Rnor_5.01012,880,557 - 12,891,739 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41012,982,319 - 12,993,706 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1012,443,567 - 12,454,296 (+)NCBICelera
RGSC_v3.11012,982,318 - 12,993,697 (+)NCBI
Cytogenetic Map10q12NCBI
PKMYT1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38162,972,808 - 2,980,446 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl162,968,024 - 2,980,813 (-)Ensemblhg38GRCh38
GRCh37163,022,809 - 3,030,447 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36162,962,793 - 2,970,475 (-)NCBIBuild 36Build 36hg18NCBI36
Celera163,228,238 - 3,235,920 (-)NCBICelera
Cytogenetic Map16p13.3NCBI
HuRef162,995,283 - 3,002,445 (-)NCBIHuRef
CHM1_1163,022,772 - 3,030,521 (-)NCBICHM1_1
T2T-CHM13v2.0162,999,487 - 3,007,174 (-)NCBIT2T-CHM13v2.0
Pkmyt1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391723,945,385 - 23,955,709 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1723,945,310 - 23,955,709 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm381723,726,336 - 23,736,735 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1723,726,336 - 23,736,735 (+)Ensemblmm10GRCm38
MGSCv371723,863,303 - 23,873,696 (+)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv361723,454,063 - 23,464,364 (+)NCBIMGSCv36mm8
Celera1724,220,014 - 24,230,508 (+)NCBICelera
Cytogenetic Map17A3.3NCBI
cM Map1712.02NCBI
Pkmyt1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495544214,364,031 - 14,372,365 (+)Ensembl
ChiLan1.0NW_00495544214,368,110 - 14,372,365 (+)NCBIChiLan1.0ChiLan1.0
PKMYT1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2183,517,578 - 3,549,487 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1167,295,971 - 7,327,895 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0161,914,651 - 1,946,407 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1163,086,713 - 3,094,475 (-)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl163,082,265 - 3,094,477 (-)EnsemblpanPan2panpan1.1
PKMYT1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1638,200,445 - 38,210,458 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl638,200,322 - 38,210,414 (+)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha639,440,999 - 39,450,948 (+)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.0638,511,079 - 38,521,031 (+)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl638,510,937 - 38,520,987 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1638,196,845 - 38,206,793 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0638,169,331 - 38,179,322 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0638,645,560 - 38,655,092 (+)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Pkmyt1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024409344105,512,794 - 105,521,087 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366941,188,442 - 1,199,079 (+)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049366941,191,534 - 1,196,532 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PKMYT1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl339,201,878 - 39,210,125 (+)EnsemblsusScr11Sscrofa11.1
Sscrofa11.1339,201,819 - 39,209,261 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2340,490,568 - 40,496,602 (-)NCBISscrofa10.2Sscrofa10.2susScr3
PKMYT1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.152,712,423 - 2,722,122 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl52,712,448 - 2,716,661 (-)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_02366606828,112,937 - 28,122,125 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Pkmyt1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624824715,770 - 724,530 (-)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_004624824715,818 - 724,535 (-)NCBIHetGla 1.0HetGla 1.0hetGla2
Pkmyt1
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v191,024,926 - 1,035,285 (+)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Pkmyt1
50 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:91
Count of miRNA genes:74
Interacting mature miRNAs:77
Transcripts:ENSRNOT00000004936
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
2313095Bss62Bone structure and strength QTL 621.50.0001tibia size trait (VT:0100001)tibia midshaft cross-sectional area (CMO:0001717)10589381150893811Rat
631660Hcar1Hepatocarcinoma resistance QTL 13.40.0001liver integrity trait (VT:0010547)volume of individual liver tumorous lesion (CMO:0001078)10666111835509383Rat
8662860Vetf10Vascular elastic tissue fragility QTL 10artery integrity trait (VT:0010639)number of ruptures of the internal elastic lamina of the abdominal aorta and iliac arteries (CMO:0002562)10666092373950353Rat
2313066Bss63Bone structure and strength QTL 631.40.0001tibia strength trait (VT:1000284)bone polar moment of inertia (CMO:0001558)10589381150893811Rat
631554Bp133Blood pressure QTL 1330.005arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)10125055464349221Rat
2313064Bmd71Bone mineral density QTL 710.90.0001tibia mineral mass (VT:1000283)compact volumetric bone mineral density (CMO:0001730)10589381150893811Rat
1578761Stresp21Stress response QTL 213.3thymus mass (VT:0004954)thymus wet weight (CMO:0000855)10687714251877142Rat
2293680Bss40Bone structure and strength QTL 405.660.0001femur strength trait (VT:0010010)femur total energy absorbed before break (CMO:0001677)10135730538Rat
7387235Uae41Urinary albumin excretion QTL 415.260.1874urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)10130004247Rat
2313104Bss61Bone structure and strength QTL 610.90.0001tibia area (VT:1000281)tibia midshaft cross-sectional area (CMO:0001717)10589381150893811Rat
61427Cia16Collagen induced arthritis QTL 163.2joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)10686461896620484Rat
10401803Kidm50Kidney mass QTL 50kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)1092219745922197Rat
2317754Glom25Glomerulus QTL 253.5urine protein amount (VT:0005160)urine protein level (CMO:0000591)10210370847103708Rat
2313081Bss64Bone structure and strength QTL 641.30.0001tibia strength trait (VT:1000284)tibia total energy absorbed before break (CMO:0001736)10589381150893811Rat
631828Alc5Alcohol consumption QTL 52.4consumption behavior trait (VT:0002069)ethanol drink intake rate (CMO:0001407)10117749933Rat
634327Hc4Hypercalciuria QTL 42.4urine calcium amount (VT:0002985)urine calcium excretion rate (CMO:0000763)10138832698Rat


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 11 67 160 90 89 58 92 58 6 353 192 11 139 80 92 31 17 17

Sequence


Ensembl Acc Id: ENSRNOT00000004936   ⟹   ENSRNOP00000004936
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1013,252,816 - 13,263,576 (+)Ensembl
mRatBN7.2 Ensembl1012,748,237 - 12,758,995 (+)Ensembl
Rnor_6.0 Ensembl1013,061,170 - 13,073,283 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000110606   ⟹   ENSRNOP00000087539
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1013,252,816 - 13,264,263 (+)Ensembl
mRatBN7.2 Ensembl1012,748,331 - 12,758,985 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000141690   ⟹   ENSRNOP00000111616
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1013,252,816 - 13,263,612 (+)Ensembl
RefSeq Acc Id: NM_001105766   ⟹   NP_001099236
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81013,252,826 - 13,263,584 (+)NCBI
mRatBN7.21012,748,237 - 12,758,995 (+)NCBI
Dahl_SR_JrHsd1016,176,527 - 16,187,360 (+)NCBI
Lyon_Normotensive1016,836,235 - 16,847,059 (+)NCBI
Lyon_Hypertensive1018,529,857 - 18,540,683 (+)NCBI
F344_StmMcwi1018,520,769 - 18,531,591 (+)NCBI
Rnor_6.01013,061,095 - 13,072,277 (+)NCBI
Rnor_5.01012,880,557 - 12,891,739 (+)NCBI
RGSC_v3.41012,982,319 - 12,993,706 (+)RGD
Celera1012,443,567 - 12,454,296 (+)RGD
Sequence:
RefSeq Acc Id: XM_017597059   ⟹   XP_017452548
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81013,252,805 - 13,263,573 (+)NCBI
mRatBN7.21012,748,221 - 12,758,985 (+)NCBI
Rnor_6.01013,061,077 - 13,072,266 (+)NCBI
Sequence:
RefSeq Acc Id: XM_063268548   ⟹   XP_063124618
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81013,252,805 - 13,263,573 (+)NCBI
RefSeq Acc Id: XM_063268549   ⟹   XP_063124619
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81013,252,805 - 13,263,573 (+)NCBI
RefSeq Acc Id: NP_001099236   ⟸   NM_001105766
- UniProtKB: G3V6G8 (UniProtKB/TrEMBL),   A6HCL6 (UniProtKB/TrEMBL),   B5DFC5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017452548   ⟸   XM_017597059
- Peptide Label: isoform X1
- UniProtKB: G3V6G8 (UniProtKB/TrEMBL),   A6HCL6 (UniProtKB/TrEMBL),   B5DFC5 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000004936   ⟸   ENSRNOT00000004936
Ensembl Acc Id: ENSRNOP00000087539   ⟸   ENSRNOT00000110606
RefSeq Acc Id: XP_063124619   ⟸   XM_063268549
- Peptide Label: isoform X2
RefSeq Acc Id: XP_063124618   ⟸   XM_063268548
- Peptide Label: isoform X2
Ensembl Acc Id: ENSRNOP00000111616   ⟸   ENSRNOT00000141690
Protein Domains
Protein kinase

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-G3V6G8-F1-model_v2 AlphaFold G3V6G8 1-490 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13696994
Promoter ID:EPDNEW_R7518
Type:initiation region
Name:Pkmyt1_1
Description:protein kinase, membrane associated tyrosine/threonine 1
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01013,061,147 - 13,061,207EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1305434 AgrOrtholog
BioCyc Gene G2FUF-25910 BioCyc
Ensembl Genes ENSRNOG00000003657 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000004936 ENTREZGENE
  ENSRNOT00000004936.8 UniProtKB/TrEMBL
  ENSRNOT00000110606.2 UniProtKB/TrEMBL
  ENSRNOT00000141690.1 UniProtKB/TrEMBL
Gene3D-CATH Phosphorylase Kinase, domain 1 UniProtKB/TrEMBL
  Transferase(Phosphotransferase) domain 1 UniProtKB/TrEMBL
InterPro CC_SR_Kinase UniProtKB/TrEMBL
  Kinase-like_dom UniProtKB/TrEMBL
  Prot_kinase_cat_dom UniProtKB/TrEMBL
  Protein_kinase_ATP_BS UniProtKB/TrEMBL
  Ser/Thr_kinase_AS UniProtKB/TrEMBL
KEGG Report rno:287101 UniProtKB/TrEMBL
NCBI Gene 287101 ENTREZGENE
PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED UniProtKB/TrEMBL
  MEMBRANE-ASSOCIATED TYROSINE- AND THREONINE-SPECIFIC CDC2-INHIBITORY KINASE UniProtKB/TrEMBL
Pfam Pkinase UniProtKB/TrEMBL
PhenoGen Pkmyt1 PhenoGen
PROSITE PROTEIN_KINASE_ATP UniProtKB/TrEMBL
  PROTEIN_KINASE_DOM UniProtKB/TrEMBL
  PROTEIN_KINASE_ST UniProtKB/TrEMBL
RatGTEx ENSRNOG00000003657 RatGTEx
SMART S_TKc UniProtKB/TrEMBL
Superfamily-SCOP Kinase_like UniProtKB/TrEMBL
UniProt A0A8I6A4D1_RAT UniProtKB/TrEMBL
  A0ABK0LYM4_RAT UniProtKB/TrEMBL
  A6HCL6 ENTREZGENE, UniProtKB/TrEMBL
  B5DFC5 ENTREZGENE, UniProtKB/TrEMBL
  G3V6G8 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2008-04-30 Pkmyt1  protein kinase, membrane associated tyrosine/threonine 1   Pkmyt1_predicted  protein kinase, membrane associated tyrosine/threonine 1 (predicted)  'predicted' is removed 2292626 APPROVED
2006-03-30 Pkmyt1_predicted  protein kinase, membrane associated tyrosine/threonine 1 (predicted)  RGD1305434_predicted  similar to membrane-associated tyrosine-and threonine-specific cdc2-inhibitory kinase (predicted)  Symbol and Name updated 1299863 APPROVED
2005-01-20 RGD1305434_predicted  similar to membrane-associated tyrosine-and threonine-specific cdc2-inhibitory kinase (predicted)  LOC287101_predicted    Symbol and Name status set to approved 1331353 APPROVED
2005-01-12 LOC287101_predicted  similar to membrane-associated tyrosine-and threonine-specific cdc2-inhibitory kinase (predicted)      Symbol and Name status set to provisional 70820 PROVISIONAL