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Gene: Csmd1 (CUB and Sushi multiple domains 1) Rattus norvegicus

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Symbol:

Csmd1

Name:

CUB and Sushi multiple domains 1

RGD ID:

1305103

Description:

Predicted to enable serine-type endopeptidase activity. Predicted to act upstream of or within several processes, including learning or memory; mammary gland branching involved in pregnancy; and reproductive structure development. Predicted to be located in membrane. Predicted to be active in extracellular space. Orthologous to human CSMD1 (CUB and Sushi multiple domains 1); INTERACTS WITH (+)-schisandrin B; 6-propyl-2-thiouracil; aflatoxin B1.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

Csmd1_predicted; CUB and sushi domain-containing protein 1; CUB and Sushi multiple domains 1 (predicted); LOC364635; Mdcr1; multiple domain complement regulator 1

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	CSMD1 (CUB and Sushi multiple domains 1)	HGNC	Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, Panther, Treefam
Mus musculus (house mouse):	Csmd1 (CUB and Sushi multiple domains 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Csmd1 (CUB and Sushi multiple domains 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	CSMD1 (CUB and Sushi multiple domains 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	CSMD1 (CUB and Sushi multiple domains 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Csmd1 (CUB and Sushi multiple domains 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	CSMD1 (CUB and Sushi multiple domains 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	CSMD1 (CUB and Sushi multiple domains 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Csmd1 (CUB and Sushi multiple domains 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Csmd1 (CUB and Sushi multiple domains 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	CSMD1 (CUB and Sushi multiple domains 1)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	CSMD1 (CUB and Sushi multiple domains 1)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Csmd1 (CUB and Sushi multiple domains 1)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Csmd1 (CUB and Sushi multiple domains 1)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	fw	Alliance	DIOPT (Ensembl Compara\|InParanoid\|OrthoInspector)
Xenopus tropicalis (tropical clawed frog):	csmd1	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	16	78,920,549 - 80,520,710 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	16	78,921,002 - 80,519,944 (+)	Ensembl				GRCr8
mRatBN7.2	16	72,218,189 - 73,818,380 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	16	72,218,503 - 73,817,614 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	16	77,492,891 - 79,091,788 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	16	80,946,484 - 82,545,366 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	16	76,195,914 - 77,794,805 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	16	77,152,823 - 78,850,222 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	16	78,539,489 - 78,850,222 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	16	77,824,236 - 78,025,776 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
Rnor_5.0	16	76,755,073 - 77,603,096 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
Rnor_5.0	16	78,123,916 - 78,434,380 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	16	77,485,217 - 78,605,037 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	16	70,047,120 - 71,640,895 (+)	NCBI		Celera
RGSC_v3.1	16	77,795,191 - 77,816,111 (+)	NCBI
Cytogenetic Map	16	q12.5	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

amphetamine abuse (ISO)

autism spectrum disorder (ISO)

autistic disorder (ISO)

hepatocellular carcinoma (ISO)

psoriasis (ISO)

schizophrenia (ISO,ISS)

substance-related disorder (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(+)-schisandrin B (EXP)

2,3,7,8-tetrachlorodibenzodioxine (ISO)

3,4-methylenedioxymethamphetamine (ISO)

6-propyl-2-thiouracil (EXP)

aflatoxin B1 (EXP,ISO)

Aflatoxin B2 alpha (ISO)

atrazine (EXP)

benzo[a]pyrene (ISO)

benzo[e]pyrene (ISO)

beta-naphthoflavone (EXP)

bisphenol A (EXP,ISO)

bisphenol F (ISO)

bromobenzene (EXP)

cadmium dichloride (EXP)

CGP 52608 (ISO)

clothianidin (ISO)

endosulfan (EXP)

ethanol (ISO)

fulvestrant (ISO)

furan (EXP)

indole-3-methanol (EXP)

levonorgestrel (ISO)

mercury dichloride (EXP)

methamphetamine (ISO)

methapyrilene (ISO)

N-nitrosodiethylamine (EXP)

nickel atom (ISO)

orphenadrine (EXP)

paracetamol (EXP)

perfluorohexanesulfonic acid (ISO)

pravastatin (EXP,ISO)

silicon dioxide (ISO)

sodium arsenite (ISO)

testosterone undecanoate (ISO)

tetrachloromethane (EXP)

titanium dioxide (ISO)

trichloroethene (EXP)

triptonide (ISO)

valproic acid (EXP)

zaragozic acid A (EXP,ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

conditioned place preference (ISO)

female gonad development (ISO)

gene expression (ISO)

glucose homeostasis (ISO)

male gonad development (ISO)

mammary gland branching involved in pregnancy (ISO)

mammary gland development (ISO)

mammary gland duct morphogenesis (ISO)

memory (ISO)

oviduct epithelium development (ISO)

startle response (ISO)

Cellular Component

extracellular space (IBA)

membrane (IEA)

Molecular Function

protein binding (ISO)

serine-type endopeptidase activity (IBA)

References

References - curated

#	Reference Title	Reference Citation
1.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
2.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
3.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
4.	Epigenetic inactivation and aberrant transcription of CSMD1 in squamous cell carcinoma cell lines.	Richter TM, etal., Cancer Cell Int. 2005 Sep 9;5:29.

Additional References at PubMed

PMID:16547280	PMID:24244513

Genomics

Comparative Map Data

Csmd1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	16	78,920,549 - 80,520,710 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	16	78,921,002 - 80,519,944 (+)	Ensembl				GRCr8
mRatBN7.2	16	72,218,189 - 73,818,380 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	16	72,218,503 - 73,817,614 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	16	77,492,891 - 79,091,788 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	16	80,946,484 - 82,545,366 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	16	76,195,914 - 77,794,805 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	16	77,152,823 - 78,850,222 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	16	78,539,489 - 78,850,222 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	16	77,824,236 - 78,025,776 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
Rnor_5.0	16	76,755,073 - 77,603,096 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
Rnor_5.0	16	78,123,916 - 78,434,380 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	16	77,485,217 - 78,605,037 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	16	70,047,120 - 71,640,895 (+)	NCBI		Celera
RGSC_v3.1	16	77,795,191 - 77,816,111 (+)	NCBI
Cytogenetic Map	16	q12.5	NCBI

CSMD1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	8	2,935,361 - 4,994,914 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	8	2,935,353 - 4,994,972 (-)	Ensembl			hg38	GRCh38
GRCh37	8	2,792,883 - 4,852,436 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	8	2,780,282 - 4,839,736 (-)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	8	2,782,789 - 4,839,736	NCBI
Celera	8	2,767,236 - 4,826,852 (-)	NCBI		Celera
Cytogenetic Map	8	p23.2	NCBI
HuRef	8	2,576,730 - 4,633,499 (-)	NCBI		HuRef
CHM1_1	8	2,881,464 - 4,940,977 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	8	2,689,262 - 4,747,707 (-)	NCBI		T2T-CHM13v2.0

Csmd1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	8	15,942,538 - 17,586,908 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	8	15,942,537 - 17,585,602 (-)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	8	15,892,538 - 17,535,385 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	8	15,892,537 - 17,535,586 (-)	Ensembl			mm10	GRCm38
MGSCv37	8	15,892,545 - 17,535,385 (-)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	8	15,895,476 - 17,535,258 (-)	NCBI		MGSCv36	mm8
Celera	8	16,030,216 - 17,667,430 (-)	NCBI		Celera
Cytogenetic Map	8	A1.1- A1.3	NCBI
cM Map	8	8.38	NCBI

Csmd1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955403	55,851,519 - 57,099,067 (+)	Ensembl
ChiLan1.0	NW_004955403	55,809,895 - 57,101,986 (+)	NCBI	ChiLan1.0	ChiLan1.0

CSMD1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	7	17,733,347 - 19,803,816 (-)	NCBI		NHGRI_mPanPan1-v2
Mhudiblu_PPA_v0	8	2,282,763 - 4,351,724 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	8	2,835,578 - 3,514,506 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	8	2,838,803 - 4,923,373 (-)	Ensembl			panPan2	panpan1.1

CSMD1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	16	55,142,990 - 56,673,978 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	16	55,143,199 - 56,673,679 (-)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	16	50,656,327 - 52,525,365 (-)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	16	59,161,533 - 61,032,747 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	16	59,161,584 - 61,031,894 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	16	55,272,000 - 57,139,927 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	16	57,070,471 - 58,938,374 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	16	57,473,720 - 59,324,300 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Csmd1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404943	1,676,253 - 3,319,713 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936615	1,679,243 - 3,319,300 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936615	1,677,845 - 2,063,781 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

CSMD1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	15	34,363,758 - 35,023,152 (-)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	15	34,361,722 - 36,243,762 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	15	39,332,100 - 39,698,113 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

CSMD1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	8	2,806,358 - 4,821,568 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
Vero_WHO_p1.0	NW_023666054	44,747,279 - 46,904,137 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Csmd1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624861	1,733,220 - 3,244,830 (-)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624861	1,731,662 - 3,244,884 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Csmd1
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	13	66,475,167 - 67,989,590 (+)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Csmd1
13250 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	544
Count of miRNA genes:	262
Interacting mature miRNAs:	317
Transcripts:	ENSRNOT00000057897
Prediction methods:	Microtar, Miranda
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
2300163	Bmd64	Bone mineral density QTL 64	5.3	0.0001	lumbar vertebra mineral mass (VT:0010511)	volumetric bone mineral density (CMO:0001553)	16	44455123	89455123	Rat
7411648	Foco22	Food consumption QTL 22	15	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	16	59428714	91442908	Rat
1298529	Arunc1	Aerobic running capacity QTL 1	4		exercise endurance trait (VT:0002332)	longest distance run on treadmill (CMO:0001406)	16	34398294	79398294	Rat
70215	Niddm29	Non-insulin dependent diabetes mellitus QTL 29	3.54		blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	16	36928782	81928782	Rat
1578768	Stresp22	Stress response QTL 22	2.8		thymus mass (VT:0004954)	thymus wet weight (CMO:0000855)	16	41992064	86992064	Rat
2293690	Bss45	Bone structure and strength QTL 45	5.13	0.0001	lumbar vertebra morphology trait (VT:0010494)	lumbar vertebra cortical cross-sectional area (CMO:0001690)	16	44455123	89455123	Rat
8694364	Abfw7	Abdominal fat weight QTL 7	12.22	0.001	visceral adipose mass (VT:0010063)	abdominal fat pad weight to body weight ratio (CMO:0000095)	16	59428714	91442908	Rat
8694429	Bw164	Body weight QTL 164	5	0.001	body lean mass (VT:0010483)	lean tissue morphological measurement (CMO:0002184)	16	59428714	91442908	Rat
7205510	Activ5	Activity QTL 5	3.78	0.00028	locomotor behavior trait (VT:0001392)	number of entries into a discrete space in an experimental apparatus (CMO:0000960)	16	49099196	91442908	Rat
1298527	Arunc2	Aerobic running capacity QTL 2	2.9		exercise endurance trait (VT:0002332)	longest distance run on treadmill (CMO:0001406)	16	75235285	81732231	Rat

Markers in Region

D16Rat13

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	16	73,187,141 - 73,187,298 (+)	MAPPER	mRatBN7.2
Rnor_6.0	16	78,172,050 - 78,172,206	NCBI	Rnor6.0
Rnor_5.0	16	77,759,093 - 77,759,249	UniSTS	Rnor5.0
RGSC_v3.4	16	77,968,643 - 77,968,799	UniSTS	RGSC3.4
RGSC_v3.4	16	77,968,642 - 77,968,799	RGD	RGSC3.4
Celera	16	71,012,225 - 71,012,381	UniSTS
RGSC_v3.1	16	77,968,908 - 77,969,064	RGD
RH 3.4 Map	16	713.2	RGD
RH 3.4 Map	16	713.2	UniSTS
RH 2.0 Map	16	828.9	RGD
SHRSP x BN Map	16	40.8399	RGD
FHH x ACI Map	16	41.3499	RGD
Cytogenetic Map	16	q12.5	UniSTS

D16Rat94

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	16	73,465,339 - 73,465,568 (-)	MAPPER	mRatBN7.2
Rnor_6.0	16	78,460,020 - 78,460,246	NCBI	Rnor6.0
Rnor_5.0	16	78,044,448 - 78,044,674	UniSTS	Rnor5.0
RGSC_v3.4	16	78,247,448 - 78,247,675	RGD	RGSC3.4
RGSC_v3.4	16	78,247,449 - 78,247,675	UniSTS	RGSC3.4
Celera	16	71,289,245 - 71,289,467	UniSTS
RGSC_v3.1	16	78,247,714 - 78,247,940	RGD
RH 3.4 Map	16	709.0	RGD
RH 3.4 Map	16	709.0	UniSTS
RH 2.0 Map	16	841.3	RGD
FHH x ACI Map	16	43.9399	RGD
Cytogenetic Map	16	q12.5	UniSTS

D16Got79

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	16	72,239,400 - 72,239,628 (+)	MAPPER	mRatBN7.2
Rnor_6.0	16	77,173,432 - 77,173,659	NCBI	Rnor6.0
Rnor_5.0	16	76,775,689 - 76,775,916	UniSTS	Rnor5.0
Celera	16	70,067,732 - 70,067,959	UniSTS
RH 3.4 Map	16	678.3	RGD
RH 3.4 Map	16	678.3	UniSTS
RH 2.0 Map	16	819.4	RGD
Cytogenetic Map	16	q12.5	UniSTS

D16Got82

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	16	73,715,559 - 73,715,772 (+)	MAPPER	mRatBN7.2
Rnor_6.0	16	78,746,085 - 78,746,297	NCBI	Rnor6.0
Rnor_5.0	16	78,330,446 - 78,330,658	UniSTS	Rnor5.0
RGSC_v3.4	16	78,501,320 - 78,501,533	RGD	RGSC3.4
RGSC_v3.4	16	78,501,321 - 78,501,533	UniSTS	RGSC3.4
Celera	16	71,538,643 - 71,538,854	UniSTS
RGSC_v3.1	16	78,501,586 - 78,501,798	RGD
RH 3.4 Map	16	707.8	UniSTS
RH 3.4 Map	16	707.8	RGD
RH 2.0 Map	16	839.2	RGD
Cytogenetic Map	16	q12.5	UniSTS

D16Got81

Rat Assembly	Chr	Position (strand)	Source	JBrowse
GRCr8	16	79,308,314 - 79,308,422 (+)	Marker Load Pipeline
mRatBN7.2	16	72,605,932 - 72,606,040 (+)	MAPPER	mRatBN7.2
Rnor_6.0	16	77,542,415 - 77,542,522	NCBI	Rnor6.0
Rnor_5.0	16	77,137,280 - 77,137,387	UniSTS	Rnor5.0
Celera	16	70,433,065 - 70,433,172	UniSTS
RH 3.4 Map	16	707.0	RGD
RH 3.4 Map	16	707.0	UniSTS
Cytogenetic Map	16	q12.5	UniSTS

RH134919

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	16	72,657,484 - 72,657,673 (+)	MAPPER	mRatBN7.2
Rnor_6.0	16	77,597,072 - 77,597,260	NCBI	Rnor6.0
Rnor_5.0	16	77,193,224 - 77,193,412	UniSTS	Rnor5.0
RGSC_v3.4	16	77,427,602 - 77,427,790	UniSTS	RGSC3.4
Celera	16	70,484,557 - 70,484,745	UniSTS
RH 3.4 Map	16	716.3	UniSTS
Cytogenetic Map	16	q12.5	UniSTS

RH137999

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	16	72,532,322 - 72,532,526 (+)	MAPPER	mRatBN7.2
Rnor_6.0	16	77,460,381 - 77,460,584	NCBI	Rnor6.0
Rnor_5.0	16	77,064,099 - 77,064,302	UniSTS	Rnor5.0
RGSC_v3.4	16	77,174,221 - 77,174,424	UniSTS	RGSC3.4
Celera	16	70,359,215 - 70,359,418	UniSTS
RH 3.4 Map	16	709.3	UniSTS
Cytogenetic Map	16	q12.5	UniSTS

BE106374

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	16	72,222,652 - 72,222,802 (+)	MAPPER	mRatBN7.2
Rnor_6.0	16	77,156,688 - 77,156,837	NCBI	Rnor6.0
Rnor_5.0	16	76,758,888 - 76,759,037	UniSTS	Rnor5.0
Celera	16	70,051,029 - 70,051,178	UniSTS
RH 3.4 Map	16	685.7	UniSTS
Cytogenetic Map	16	q12.5	UniSTS

BF405594

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	16	72,847,682 - 72,847,855 (+)	MAPPER	mRatBN7.2
Rnor_6.0	16	77,825,162 - 77,825,334	NCBI	Rnor6.0
Rnor_5.0	16	77,415,476 - 77,415,648	UniSTS	Rnor5.0
RGSC_v3.4	16	77,624,717 - 77,624,889	UniSTS	RGSC3.4
Celera	16	70,674,271 - 70,674,443	UniSTS
RH 3.4 Map	16	709.0	UniSTS
Cytogenetic Map	16	q12.5	UniSTS

AU046655

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	16	72,931,769 - 72,931,991 (+)	MAPPER	mRatBN7.2
mRatBN7.2	16	72,931,769 - 72,932,033 (+)	MAPPER	mRatBN7.2
Rnor_6.0	16	77,909,201 - 77,909,464	NCBI	Rnor6.0
Rnor_6.0	16	77,909,201 - 77,909,422	NCBI	Rnor6.0
Rnor_5.0	16	77,498,727 - 77,498,990	UniSTS	Rnor5.0
Rnor_5.0	16	77,498,727 - 77,498,948	UniSTS	Rnor5.0
RGSC_v3.4	16	77,711,717 - 77,711,938	UniSTS	RGSC3.4
RGSC_v3.4	16	77,711,717 - 77,711,980	UniSTS	RGSC3.4
Celera	16	70,758,641 - 70,758,904	UniSTS
Celera	16	70,758,641 - 70,758,862	UniSTS
Cytogenetic Map	16	q12.5	UniSTS

ksks359

Rat Assembly	Chr	Position (strand)	Source	JBrowse
Rnor_5.0	5	14,330,766 - 14,330,809	NCBI	Rnor5.0
Rnor_5.0	16	77,400,900 - 77,402,298	NCBI	Rnor5.0
RGSC_v3.4	16	77,605,647 - 77,607,044	UniSTS	RGSC3.4
RGSC_v3.4	5	9,415,140 - 9,415,182	UniSTS	RGSC3.4
Celera	16	70,660,028 - 70,661,425	UniSTS
Celera	5	9,345,017 - 9,345,059	UniSTS
Cytogenetic Map	16	q12.5	UniSTS
Cytogenetic Map	9	q37	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
13	9	40	147	65	64	33	49	33	6	251	119	9	126	78	91	31	14	14

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001037327	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039094737	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	DQ124115	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000016	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000057897 ⟹ ENSRNOP00000054705

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	16	78,921,002 - 80,519,944 (+)	Ensembl
mRatBN7.2 Ensembl	16	72,218,503 - 73,817,614 (+)	Ensembl
Rnor_6.0 Ensembl	16	78,539,489 - 78,850,222 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000140156 ⟹ ENSRNOP00000108941

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	16	78,921,002 - 80,519,944 (+)	Ensembl

RefSeq Acc Id:

NM_001037327 ⟹ NP_001032404

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	16	78,921,164 - 80,519,944 (+)	NCBI
mRatBN7.2	16	72,218,765 - 73,817,614 (+)	NCBI
Rnor_6.0	16	77,152,823 - 78,850,222 (+)	NCBI
Rnor_5.0	16	78,123,916 - 78,434,380 (+)	NCBI
Rnor_5.0	16	76,755,073 - 77,603,096 (+)	NCBI
Rnor_5.0	16	77,824,236 - 78,025,776 (+)	NCBI
RGSC_v3.4	16	77,485,217 - 78,605,037 (+)	RGD
Celera	16	70,047,120 - 71,640,895 (+)	RGD

Sequence:

show sequence

GCCATCCCTGTCGTGTGCGTGTGGAATATCTGCAGACATGACTGCGTGGAGGAAATTCAAGTCG
CTGCTCCTGCCTCTGGTGCTGGCGGTTCTGTGCGCGGGGCTCCTCACTGCAGCTAAGGGTCAGA
ACTGTGGTGGCCTGGTACAGGGACCCAATGGCACCATCGAAAGTCCTGGATTTCCCCATGGGTA
CCCTAATTATGCCAACTGCACCTGGATCATTATCACTGGGGAGCGCAACCGGATCCAGCTATCC
TTCCACACCTTTGCCCTAGAAGAGGACTTTGATATCTTATCTGTCTATGATGGACAGCCCCAGC
AAGGGAACTTGAAAGTGAGGCTGTCAGGATTCCAGCTGCCTTCTTCCATCGTGAGCACCGGGTC
GCTCCTCACGCTCTGGTTCACCACGGACTTCGCAGTGAGCGCACAGGGTTTCAAGGCCATGTAT
GAAGTTTTACCTAGTCACACGTGTGGAAACCCTGGGGAGATACTGAAAGGAGTTCTCCATGGAA
CGAGGTTCAACATAGGCGACAAGATCAGATACAGCTGTCTCTCCGGCTACATCTTGGAAGGTCA
CGCCATTCTGACTTGCATCGTCAGCCCAGGGAATGGTGCATCCTGGGACTTCCCAGCTCCTTTC
TGCAGAGCTGAGGGAGCCTGCGGGGGAACCCTAAGGGGAACCAGCGCTTCCATATCCAGCCCTC
ACTTCCCCTCAGAGTACGACAACAATGCAGACTGCACGTGGACCATCTTGGCTGAGCCTGGGGA
CACCATTGCTCTTGTTTTTACTGACTTCCAGCTGGAGGAAGGATACGACTTTTTAGAGATCAGC
GGGACAGAAGCGCCGTCCATATGGCTCACAGGCATGAACCTCCCATCCCCTGTGATCAGCAGTA
AGAACTGGCTCCGTCTCCATTTCACGTCTGACAGCAACCATCGACGTAAGGGCTTCAACGCTCA
GTTCCAAGTGAAAAAGGCAATTGAGCTGAAGTCCAGAGGAGTCAAAATGCTACCAAGCAAGGAC
AGCAGCCACAAAAACTCTGTCTTGACCCAAGGAGGTGTGTCTCTGGTCTCTGACATGTGTCCAG
ATCCTGGAATTCCAGACAATGGCAGAAGAGCAGGCTCTGACTTCAGGGTTGGTGCAAACGTGCA
GTTCTCCTGTGAGGATAATTATGTCCTCCAAGGGGCCAAGGGCATCACCTGTCAAAGAGTCACA
GAGACCCTAGCAGCATGGAGTGACCACCGACCCATCTGCCGAGCCAGGACATGTGGATCAAACC
TGCGTGGGCCGAGTGGTGTCATCACCTCCCCTAACTACCCAGTGCAGTATGAAGACAATGCTCA
CTGCGTGTGGGTCATCACAACCACTGATCCAGACAAGGTCATCAAACTTGCTTTTGAAGAGTTT
GAGTTGGAACGAGGGTACGACACTCTGACAGTTGGGGATGCCGGGAAGGTGGGGGACACCAGAT
CCGTCTTGTACGTGCTTACAGGCTCCAGTGTCCCTGACCTCATCGTGAGCATGAGCAATCAGAT
GTGGCTCCACCTGCAGTCAGACGACAGCATTGGTTCCCCAGGATTTAAAGCTGTGTACCAAGAA
ATCGAGAAGGGAGGCTGCGGGGACCCTGGCATCCCAGCCTACGGGAAGCGGACTGGCAGCAGCT
TCTTGCACGGGGACACGCTCACCTTTGAGTGCCAGGCAGCTTTTGAGCTGGTAGGAGAGAGAGT
GATTACGTGCCAGAGAAACAACCAGTGGTCCGGCAACAAGCCAAGCTGTGTGTTTTCATGTTTC
TTCAACTTCACGGCGTCCTCTGGGATCATCCTGTCGCCAAACTATCCTGAGGAATATGGCAACA
ACATGAATTGTGTGTGGTTGATTATATCTGAGCCCGGGAGCCGGATTCACCTCATCTTCAATGA
TTTCGATGTGGAGCCTCAGTTTGACTTCCTTGCGGTCAAAGATGATGGGATTTCTGACATCACA
GTCCTCGGGACTTTCTCTGGCAATGAGGTGCCTGCACAGCTGGCCRGCAGTGGACACATAGTAC
GCCTGGAGTTTCAGTCCGATCACTCTACCACGGGCAGAGGGTTCAACATCATATACACCACATT
TGGTCAGAACGAGTGTCATGACCCTGGGATCCCTGTGAATGGACGGCGCTTTGGAGACAGGTTT
CTGCTGGGAAGTTCTGTGTCCTTCCACTGTGATGATGGCTTTGTGAAGACTCAGGGTTCTGAGT
CTATCACATGCATCTTGCAAGATGGAAACGTGGTCTGGAGCTCTACTGTCCCTCGCTGTGAAGC
TCCTTGTGGTGGGCATCTGACAGCTTCTAGTGGGGTCATATTACCTCCAGGATGGCCAGGATAT
TACAAAGATTCTTTAAATTGCGAATGGGTCATTGAAGCCAAACCAGGACATTCCATCAAAATAA
CATTTGACAGGTTCCAGACAGAAGTCAATTATGATACTCTGGAAGTCCGGGATGGGCCAACCAG
CTCATCCCCACTGATTGGGGAGTACCATGGCACCCAGGCTCCACAGTTCCTCATCAGCACAGGG
AACTACATGTACCTGCTGTTTACCACTGACAGCAGCCGCGCTAGTGTTGGCTTCCTCATCCACT
ATGAGAGTGTGACTCTTGAATCTGACTCCTGTCTGGACCCGGGCATCCCTGTAAATGGTCATCG
GCATGGCAGTAACTTTGGTATCAGATCTACAGTGACCTTCAGCTGTGACCCTGGGTACACGCTC
AGTGATGACGATCCCCTCATCTGTGAGAAGAACCATCAGTGGAACCACGCCTTGCCCAGCTGTG
ATGCCCTGTGTGGAGGCTACATCCATGGAAAGAGTGGGACTGTTCTTTCACCAGGATTTCCAGA
CTTTTATCCAAACTCTCTGAACTGTACATGGACCATTGAAGTCTCTCATGGCAAGGGAGTGCAG
ATGAATTTCCACACCTTTCACCTTGAAAGTTCCCACGACTATTTGCTGATCACAGAGGATGGGA
GTTTCTCAGAGCCGGTAGCCAGGCTCACTGGGTCGGTCCTGCCTCACACCATTAAGGCTGGCTT
GTTTGGAAACTTCACTGCGCAACTCAGGTTCATCTCTGACTTCTCCATCTCCTATGAAGGCTTC
AACATTACGTTTGCAGAATATGACCTAGAACCCTGTGATGACCCTGGAGTCCCTGCCTACAGTC
GCAGAATTGGGTTCCAGTTCGGTGTGGGTGACACCCTGGCTTTCACCTGCTTCCAGGGATACCG
CTTAGAAGGTGCAACCAAGCTTACCTGCCTGGGTGGGGGACGCCGAGTGTGGAGTGCACCTCTG
CCAAGGTGTGTGGCTGAATGTGGAGCAAGCGTCAAAGGAAATGAAGGAACATTACTCTCTCCAA
ATTTCCCATCCAATTATGATAATAACCATGAGTGTATCTATAAAATAGAAACAGAAGCCGGAAA
GGGGATCCATCTCAGAGCCCGAACCTTCCAACTCTTCGAAGGAGACACTCTAAAGGTTTATGAT
GGAAAGGACAGCTCCTCGAGGTCACTGGGAGTCTTCACAAGAAGTGAACTGATGGGGCTGGTGC
TAAACAGCACCTCCAACCACCTGAGGCTGGAGTTCAACTCTAACGGGTCAGATACCGCCCAAGG
CTTCCAGCTCACCTACACCAGTTTTGACCTAGTGAAATGTGAGGATCCAGGCATCCCTAACTAT
GGCTACAGGATCCGAGATGATGGTCACTTCACAGACACTGTGGTTCTCTACAGCTGCAACCCAG
GCTACGCAATGCATGGCAGCAGTACCCTGACCTGCCTGAGTGGGGACCGAAGGGTGTGGGACAA
ACCTATGCCTTCCTGTGTGGCGGAATGTGGTGGTCTCGTCCATGCAGCCACATCAGGACGCATA
CTCTCTCCTGGCTACCCTGCCCCATATGACAACAACCTTCATTGCACTTGGACCATAGAGGCTG
ATCCTGGCAAGACCAYCAGCCTCCATTTCATTGTGTTTGACACTGAAACGGCGCACGACATCCT
CAAGGTCTGGGATGGTCCAGTGGACAGCAACATCCTGCTGAAGGAGTGGAGCGGCTCGGCCCTT
CCTGAGGACATCCACAGCACCTTCAACTCGCTCACCCTGCAGTTCGATAGTGACTTCTTCATCA
GCAAGTCCGGCTTCTCCATCCAGTTCTCTACTTCCATTGCATCCACCTGCAATGACCCTGGGAT
GCCTCAGAATGGAACCCGCTATGGTGACAGCCGGGAACCTGGAGACACCATCACCTTCCAGTGT
GACCCTGGATACCAGCTCCAAGGGCAAGCCAAGATCACTTGTGTGCAGCTTAACAACCGCTTCT
TCTGGCAACCAGACCCTCCGTCATGCATAGCTGCTTGTGGTGGGAATCTGACAGGCCCTGCTGG
AGTGATTTTATCCCCAAACTACCCACAGCCATACCCTCCTGGGAAGGAGTGTGACTGGAGAATT
AAGGTGAACCCAGACTTTGTCATTGCCTTAATATTCAAAAGTTTTAGCATGGAGCCAAGTTACG
ACTTCCTGCATATCTATGAAGGGAAGGACTCCAACAGCCCACTGATCGGAAGCTTCCAGGGTTC
TCAAGCCCCAGAGAGGATTGAGAGCAGTGGTAACAGCCTCTTCCTGGCATTCAGGAGTGATGCC
TCTGTTGGCCTGTCCGGGTTTGCCATTGAATTTAAAGAGAAACCACGGGAAGCTTGCTTTGACC
CTGGGAACATAATGAACGGGACAAGGATTGGAACGGACTTTAAGCTGGGCTCTACAGTTACCTA
TCAATGTGACTCTGGTTACAAGATTGTGGATCCCTCATCCATTGAGTGTGTGACAGGGGCTGAT
GGGAAGCCGTCCTGGGACCGGGCACTGCCTGCCTGCCAAGCACCCTGTGGAGGCCAATACATGG
GCTCGGAGGGGGTAGTTTTGTCACCAAACTACCCTCATAACTACACGGCTGGGCAGATATGCAT
CTATTCCATCACGGTGCCCAAGGAATTTGTGGTGTTTGGACAGTTTGCCTATTTCCAGACTGCG
CTGAACGACTTGGCAGAATTGTTTGATGGAACCCATCCTCAGGCCAGGCTTCTCAGTTCTCTCT
CTGGTTCCCATTCAGGTGAAACACTCCCGCTGGCTACATCCAATCAGATTCTGCTTCGCTTCAG
CGCAAAGAGCGGAGCTTCTGCACGGGGTTTCCACTTCGTCTACCAAGCCGTCCCACGCACCAGT
GACACGCAGTGCAGCTCCGTCCCTGAGCCCAGATATGGGAGAAGGATTGGTTCTGAGTTCTCTG
CAGGCTCCATCGTCCGATTCGAGTGCAACCCAGGTTACCTGCTGCAAGGCTCCACAGCCATCCG
TTGTCAGTCTGTGCCAAACGCTTTGGCCCAGTGGAATGACACCATCCCAAGCTGTGTAGTTCCA
TGCAGTGGCAATTTCACTCAGAGAAGAGGGACAATCTTATCTCCAGGCTACCCTGAGCCCTATG
GGAACAACCTGAACTGTGTATGGAAGATCATAGTATCGGAGGGCTCAGGGATCCAGATCCAAGT
GATTAGCTTTGCCACGGAGCAGAACTGGGACTCCCTGGAGATCCATGACGGAGGAGACATGACG
GCCCCCAGACTGGGCAGCTTCTCAGGTACCACAGTGCCCGCACTGCTGAATAGCACCTCCAACC
AGCTCTGCCTGCACTTCCAGTCGGACATCAGTGTTGCCGCTGCGGGCTTTCACCTGGAATACAA
AACGGTGGGTCTGGCTGCGTGCCAGGAACCTGCTCTCCCGAGCAACGGCATCAAGATAGGAGAC
CGCTATATGGTGAACGATGTGCTGTCCTTCCAGTGCGAGCCTGGGTACACCTTGCAGGGCCGCT
CACACATTTCTTGTATGCCGGGAACTGTACGTCGCTGGAACTATCCTTCCCCTCTGTGCATTGC
CACCTGTGGTGGGACACTGACCAGCATGAGTGGAGTGATCCTGAGCCCAGGCTTCCCAGGGTCA
TACCCCAACAACCTGGACTGCACCTGGAAGATATCCCTGCCCATTGGCTATGGTGCACATATCC
AATTTCTGAATTTCTCAACTGAAGCCAACCATGACTACCTGGAGATCCAGAATGGCCCTTACCA
CAGTAGTCCAATGATGGGACAGTTCAGTGGCCCTGACCTGCCTGCGTCACTGCTGAGCACCACA
CATGAAACCCTCATCCGCTTCTATAGTGACCACTCACAGAACCGACAAGGATTTAAACTCAGTT
ACCAAGCTTATGAGTTACAGAACTGCCCGGACCCACCCGCATTCCAGAATGGGTTCATGATCAA
CTCCGATTACAGCGTGGGCCAGTCGATCTCATTTGAGTGCTACCCGGGCTACATCTTGCTAGGC
CACCCTGTGCTCACCTGCCAGCATGGCACTGACAGGAACTGGAACTACCCTTTCCCACGGTGTG
ACGCTCCCTGTGGGTATAATGTGACATCACAGAATGGCACCATTTATTCCCCTGGGTTCCCAGA
CGAGTATCCAATTCTGAAGGACTGCCTGTGGCTGGTCACTGTCCCTCCAGGACATGGAGTGTAC
ATCAACTTCACCTTGCTGCAGACTGAGGCTGTAAATGACTACATCGCTGTGTGGGATGGTCCTG
ACCAGAACTCGCCTCAGCTCGGGGTCTTCAGTGGAAACACTGCCCTCGAGACAGCATACAGCTC
CACCAACCAGGTCTTGCTCAAATTCCACAGCGATTTCTCCAATGGAGGCTTCTTTGTCCTCAAT
TTTCATGCATTTCAACTGAAGAGGTGCCCGCCTCCTCCAGTAGTGCCGCAGGCTGACCTGCTTA
CAGAAGATGAAGACTTTGAAATAGGGGACTTCGTAAAGTACCAGTGCCATCCAGGGTACACGCT
GTTGGGAAGTGACACCCTGACATGCAAGCTCAGCTCACAGCTATTGTTCCAAGGCTCTCCACCT
ACCTGTGAAGCACAATGCCCAGCCAATGAAGTGCGAACAGAGTCTTCTGGGGTGATTCTCAGTC
CTGGGTACCCAGGCAACTATTTTAACTCCCAGACATGTGCTTGGAGTATTAAAGTGGAGCCAAA
CTTTAACATTACGCTCTTTGTGGACACCTTTCAAAGTGAAAAGCAATTTGATGCACTGGAAGTA
TTTGATGGTTCTTCTGGGCAAAGTCCTTTGTTAGTGGTCTTAAGTGGGAACCACACTGAACAGT
CCAATTTTACCAGCAGAAGTAACCATCTGTACCTCCGCTGGTCCACAGATCATGCAACCAGCAA
GAAAGGATTCAAGATTCGCTATGCAGCTCCTTACTGCAGCCTCACCTCTACACTCAAGAATGGT
GGCGTTTTAAATAAAACCGCAGGCGCCCTGGGGAGCAAGGTGCAGTATTTCTGCAAGCCTGGAT
ATCGAATGATTGGCCACAGCAACGCCACCTGCAGGCGGAACCCAGTGGGCGTGTACCAGTGGGA
CTCGATGGCACCGCTTTGCCAGGCTGTGTCCTGTGGAATTCCAGAGGCTCCAGGAAATGGCTCG
TTCACAGGCAATGAGTTCACCTTAGACAGTAAAGTGACTTATGAATGTAATGAAGGCTTCAAGC
TGGATGCCAGTCAGCAAGCCACTGCTGTGTGTCAAGAAGATGGCCTGTGGAGCAACAGAGGAAA
GCCACCCACGTGCAAACCGGTGCCCTGCCCCAGCATCGAAGGCCAGCTGTCAGAGCACGTGCTC
TGGAGGCTGGTTTCGGGATCATTGAATGAATATGGAGCTCAAGTTCTCCTCAGCTGTAGTCCTG
GCTACTTCTTGCAGGGTCAGAGGCTGTTGCAGTGCCAAGCCAATGGGACCTGGAACACTGAGGA
GGACAGACCCAGATGTAAAGTCATCTCCTGTGGAAGCCTGTCCTTTCCCCCAAATGGTAACAAG
ATAGGGACGCTCACTATGTATGGAGCCACCGCCATCTTTACCTGCAATACCGGCTACACACTTG
TAGGCTCCCATGTCCGGGAGTGCTTGGCCAATGGTCTCTGGAGCGGATCTGAAACAAGGTGCCT
GGCGGGTCATTGTGGCTCTCCAGACCCCATTGTGAATGGCCATATCAGTGGCGATGGCTTCAGC
TACAGGGACACAGTGGTCTACCAATGCAACCCTGGGTTTCGACTCGTAGGCACGTCTGTGAGGA
TTTGCCTGCAGGACCACAAGTGGTCGGGGCAGACCCCCGTTTGCGTCCCCATCACATGTGGACA
CCCTGGAAACCCTGCCCATGGCCTCACCAACGGCAGCGAGTTCAACCTGAATGACCTTGTGAAT
TTCACCTGCCATACGGGCTACCTGCTGCAGGGTGCCTCCCGAGCCCAATGTCGGAGCAACGGCC
AGTGGAGCAGCCCCTTGCCTATCTGCCGAGTGGTGAACTGTTCCGATCCTGGATTTGTGGAAAA
TGCAGTTCGCCACGGGCAACAGAACTTTCCAGAGAGTTTCGAGTATGGGACAAGTGTGATGTAT
CACTGCAAGAAGGGGTTCTACCTACTGGGCTCTTCTGCCCTGACCTGCATGGCAAGTGGCTTGT
GGGACCGCTCCTTACCCAAGTGTCTGGCTATATCATGTGGGCATCCTGGGGTCCCCGCTAATGC
TGTCCTGACTGGAGAATTGTTTACATTTGGAGCCACAGTTCAGTACTCCTGCAAAGGGGGCCAG
ATTCTCACAGGCAATAGCACAAGAGTCTGCCAAGAAGACAGTCACTGGAGTGGATCCCTTCCCC
ATTGTTCAGGAAATAGTCCTGGATTTTGTGGTGATCCAGGGACCCCAGCACATGGGTCTCGTCT
TGGGGATGAGTTTAAGACAAAGAGTCTTTTGCGATTCTCCTGTGAGATGGGCCACCAGCTGCGG
GGTTCTGCAGAGCGCACATGCCTGGTGAATGGGTCCTGGTCAGGAGTCCAGCCTGTGTGTGAGG
CCGTGTCCTGTGGAAACCCTGGCACCCCTACCAATGGGATGATCCTCAGCAGCGATGGAATCCT
CTTCTCCAGCTCTGTCATCTATGCCTGCTGGGAAGGCTACAAGACCTCGGGGCTCATGACGCGG
CACTGCACAGCGAACGGGACATGGACAGGCACAGCCCCTGACTGTACAATCATCAGCTGTGGTG
ATCCTGGCACACTGCCCAATGGCATCCAGTTTGGGACAGACTTCACTTTCAACAAGACCGTGAG
CTATCAGTGCAACCCTGGCTACCTGATGGAGCCCCCAACATCACCCACCATCCGCTGCACCAAA
GATGGTACATGGAATCAGACCCGGCCCCTCTGCAAAGCTGTTCTATGCAGCCAGCCTCCCTCAG
TGCCAAACGGAAAGGTGGAGGGGTCAGACTTCCGATGGGGTGCCAGCATAAGCTACAGTTGTGT
GGATGGCTACCAGCTCTCCCACTCGGCCATCCTGTCCTGTGAAGGGCGTGGAGTATGGAAAGGA
GAAGTCCCTCAGTGCTTGCCTGTGTTCTGTGGCGATCCAGGCACTCCAGCAGAGGGACGGCTCA
GTGGGAAAAGCTTCACCTTTAAGTCTGAGGTCTTCATCCAGTGCAAACCCCCATTTGTGTTAGT
GGGTTCCTCGAGGAGAACCTGCCAGGCCGATGGGATGTGGAGTGGCATCCAGCCCACTTGTATA
GATCCAGCCCACACCGCTTGCCCAGACCCCGGCACTCCCCACTTTGGAATACAGAATAGCTCGA
AAGGATACGAGGTTGGAAGCACTGTGTTCTTCAGATGTAGAAAAGGTTACCACATCCAAGGCTC
CACTACCCGGACCTGTCTTGCCAACCTCACGTGGAGTGGAATCCAGACAGAGTGCATCCCCCAT
GCCTGCCGGCAGCCAGAGACCCCAGCGCATGCAGATGTGAGAGCCATCGATCTTCCAGCTTTTG
GCTACACCTTAGTCTACACCTGTCATCCAGGATTTTTCCTTGCTGGCGGATCTGAGCACAGGAC
GTGTAAAGCAGACATGAAATGGACAGGAAAGTCACCTGTTTGTAAAAGTAAAGGAGTGAGAGAA
GTTAATGAAACAGTTACTAAAACTCCAGTTCCTTCTGATGTATTTTTCATCAACTCGGTGTGGA
AGGGATATTATGAATATTTAGGCAAGAGACAGCCGGCGACTCTCACTGTGGACTGGTTTAATGC
AACCAGCAGCAAGGTCAATGCGACCTTCACCGCAGCCTCACAGGTGCAGCTGGAGCTGACAGGG
GTCTACAAGAAGGAAGAGGCCCACCTGCTTCTGAAAGCCTTTCATATCAAAGGCCCAGCAGATA
TTTTTGTAAGCAAGTTTGAAAATGACAACTGGGGACTCGATGGTTATGTATCCTCAGGACTTGA
GAGAGGAGGATTCTCCTTTCAGGGTGATATACATGGAAAAGACTTCGGGAAGTTCAAGCTGGAA
AGACAAGATCCTTCCAACTCTGATGCAGATTCTTCAAATCATTACCAGGGCACCAGCAGTGGCT
CTGTGGCAGCTGCGATTCTCGTCCCCTTCTTCGCTCTAATTCTATCAGGGTTTGCATTTTACCT
CTACAAACACAGAACAAGACCAAAAGTTCAATACAATGGCTATGCTGGCCATGAAAACAGTAAT
GGACAAGCTTCATTTGAAAACCCCATGTATGATACAAACTTAAAACCCACAGAGGCCAAGGCTG
TGAGGTTTGACACGACTCTGAACACAGTGTGTACAGTGGTATAGCCCTCAGTGCCCCCTAGGAC
CGACTCATAGCCATACCTCTGATGGACAAGCAGTAAAATCCTTTGGTGCCATATACCACCCCCT
TCTACTCTTACCTTGCTGCAGCAACGTTGGCCATCGTCTGCTGGCATAACGCAGTGGGAATGTC
TTCTCCATCATGCCCGAGTCTTCTGAGGATCAAATTGCAAATACACCTTCATCTGGAAAGTGGC
TTATAAAAAGCCCGGTTGCTGCATCCACCAGAAATCAAGACCCCGACAACAGCGAGGGCAAGGA
AGACTGCAGAGTCTCCCAGACCGGTGGTACTTAATGCCTCTGACTTTTGTGTCTCTGTGTGGCC
AGGATGCCTTTGGTGTAGTCTTCTGAGCACACCGATACATCCCTCAGGTGCGGCGACAACATGG
TAGCCACTTGATGTGTGTTTTGTGTTTTTCTGTTTTCTTTTCAACCCTATCCACTGGACATGAA
TTCTTTACAAAAGAAAAGCCTTCCTGGAGAAGACGCCTTCTGGAAAATGCACACACAGACGCTT
TGCTTCTGCCCTGCCTGAGACAGGAGCTCTCCGGATCTTCAGGCTCCACTGGGCGTCCATCAGC
CACTAGGGATGTTTGCAGATCTCACAGTCAGAGCTGGTCCATCCCAGAGTTTTTTGATGCTCAA
CATTTTGCACTAGTGTGTCAAGAATGACTAAGTCTGATTTCTAAACAAACTATTTCCACAGGGT
TTGTATCCACTATACATTGTACATACGCATTTTCTCATACCGTATTCTCAAGCAAATGATGCCA
CTGTCAGTTAAGTTTGGGATGCAAAGGAAGGTCTCCCCGGATACAGAACAGATTTTGAAAAGGA
GATAGTGCTAGTAATGCTGAAGAAGTTACTCTTTTAATTGCTTCTGTTGGCCACATTTTCATGT
CAAATTCATTGCCTACTTCCAGTGGTGGAAATGAAGCCCGTGTATTCCCCTTGGTATCCCCCCA
CTTCATGTGCATACGACTATTGTCTACACCATACTAATCAATAACAGGGGGCTCCAGCAATGTC
TGTTTTCCATGTACAGATGTGAATAGTAATTTATTTTAGGTAGCTCATGAACTCAGTTCACAGT
GAAGTCTTCCCTTCCGGATTGTTTCCTTTCTCTGTTTTGTAACATCACCCTCCCAGAATGCATT
GAGAGTCTATCTCACAGCCACACCCAAGCTCAGAGGAATCGAAAGGGAAATCAAAGAAGTCCAA
ATCAGAATCGGAAGGGCAGGCACCGCTCGCACACCCTCATGATGATCTGTTTTATAGATTATTT
GCCTTTCTGCAAAAAAAAAATCATTACAGTGATTTTTGAAACATTAAAATTCCTTACTGATAGA
CTATCTATTGTGATATATATAAGATAGGTGGTATGGCCAACAGGGATAAAATAAACAGCCTAAA
GACAAGGCAGGGCTAGAGAAATGTCTGTAAGAAATTTCAAAGAGAAGATCATGTTTATTTTTAT
TTATATTTGTTTGATAAAAGTATTTTTGGAAATATAATGCTTATTTTATTATTTGACGTTTCAT
GCACAGTCCACGTGGTAAAAATCCCCCCTTTGTACATCCCAGATTTGCACTGATACATGGGTCA
GGATGTCATGCTGATGTTCTGTTTGCTGTGGTGACTACATTCATGCCTAGCTTTAAGACAGGTG
GATCTGTCTATCTACATGATGTTTAAATGCAGGACTTCCCAGAGGACAGTGGGTAACGGAACAT
GGCTTGCTTGCGGCTTTGGAAGTTCAGCATTCTGAGCGTTCCAGAGGCCCGGCTGGGCTCCCTC
CTTCTAGCCCACTGTTCTTGCAAGGGCTGTCTGTTGTGTGCCAGGGCTCCTGACTTCTTCTGCT
GACACTCTGTCCACTGGGTTCCATATTCCAGGACTCCATGTCCTAGGAAAGAGTTTTGACATAG
GTTCCTCCAGCCAAGCCGACACACATCCACGGGGTTCCTCTGGGCTCCACAGAGGTTCTTCATT
GGCTCCCTGGGATAAATTCAGATGATGTCAGCAAGAGTGTGCTTCTATACCACACATTGAGCCA
AAACAAAACAGAGAACGTCAGAAGGTCCACGGACCAGAGTGCGCAAGGGAGAACAGGGTTACTA
TATATATTAGATGTATATAAAAACACACACACAAACATATATATATTGTACATATCTAAGTTTG
AGTCACTCAGACTAGGTGCAAAATGCTGACTTTGGAGTCTAAACTAACGTCTCTGTCCCCACAT
CCCTGGCCTCTTTCCTGGCCAGTTACATTAAGAAGACTTGACTTAGACAGGGCATACATACATG
CAAGGAACCACATCATCAGACCAGTGTCGTTTTCCTTTGTGTGCAAACTGACCTACAGCTACCA
GACTGCATCATGGTATTTAAAACCAACATACAATATTGAGCGGCACTCTCAGTTGAGAGCCTAG
CTCAATCCTTCCTAGG

hide sequence

RefSeq Acc Id:

XM_039094737 ⟹ XP_038950665

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	16	78,920,549 - 80,520,710 (+)	NCBI
mRatBN7.2	16	72,218,189 - 73,818,380 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001032404	(Get FASTA)	NCBI Sequence Viewer
	XP_038950665	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAZ31060	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000054705
	ENSRNOP00000054705.4
	ENSRNOP00000108941
	ENSRNOP00000108941.1

RefSeq Acc Id:	NP_001032404 ⟸ NM_001037327
- Peptide Label:	precursor
- UniProtKB:	E9PT92 (UniProtKB/TrEMBL), Q45NC2 (UniProtKB/TrEMBL)
- Sequence:	show sequence MTAWRKFKSLLLPLVLAVLCAGLLTAAKGQNCGGLVQGPNGTIESPGFPHGYPNYANCTWIIIT GERNRIQLSFHTFALEEDFDILSVYDGQPQQGNLKVRLSGFQLPSSIVSTGSLLTLWFTTDFAV SAQGFKAMYEVLPSHTCGNPGEILKGVLHGTRFNIGDKIRYSCLSGYILEGHAILTCIVSPGNG ASWDFPAPFCRAEGACGGTLRGTSASISSPHFPSEYDNNADCTWTILAEPGDTIALVFTDFQLE EGYDFLEISGTEAPSIWLTGMNLPSPVISSKNWLRLHFTSDSNHRRKGFNAQFQVKKAIELKSR GVKMLPSKDSSHKNSVLTQGGVSLVSDMCPDPGIPDNGRRAGSDFRVGANVQFSCEDNYVLQGA KGITCQRVTETLAAWSDHRPICRARTCGSNLRGPSGVITSPNYPVQYEDNAHCVWVITTTDPDK VIKLAFEEFELERGYDTLTVGDAGKVGDTRSVLYVLTGSSVPDLIVSMSNQMWLHLQSDDSIGS PGFKAVYQEIEKGGCGDPGIPAYGKRTGSSFLHGDTLTFECQAAFELVGERVITCQRNNQWSGN KPSCVFSCFFNFTASSGIILSPNYPEEYGNNMNCVWLIISEPGSRIHLIFNDFDVEPQFDFLAV KDDGISDITVLGTFSGNEVPAQLAXSGHIVRLEFQSDHSTTGRGFNIIYTTFGQNECHDPGIPV NGRRFGDRFLLGSSVSFHCDDGFVKTQGSESITCILQDGNVVWSSTVPRCEAPCGGHLTASSGV ILPPGWPGYYKDSLNCEWVIEAKPGHSIKITFDRFQTEVNYDTLEVRDGPTSSSPLIGEYHGTQ APQFLISTGNYMYLLFTTDSSRASVGFLIHYESVTLESDSCLDPGIPVNGHRHGSNFGIRSTVT FSCDPGYTLSDDDPLICEKNHQWNHALPSCDALCGGYIHGKSGTVLSPGFPDFYPNSLNCTWTI EVSHGKGVQMNFHTFHLESSHDYLLITEDGSFSEPVARLTGSVLPHTIKAGLFGNFTAQLRFIS DFSISYEGFNITFAEYDLEPCDDPGVPAYSRRIGFQFGVGDTLAFTCFQGYRLEGATKLTCLGG GRRVWSAPLPRCVAECGASVKGNEGTLLSPNFPSNYDNNHECIYKIETEAGKGIHLRARTFQLF EGDTLKVYDGKDSSSRSLGVFTRSELMGLVLNSTSNHLRLEFNSNGSDTAQGFQLTYTSFDLVK CEDPGIPNYGYRIRDDGHFTDTVVLYSCNPGYAMHGSSTLTCLSGDRRVWDKPMPSCVAECGGL VHAATSGRILSPGYPAPYDNNLHCTWTIEADPGKTXSLHFIVFDTETAHDILKVWDGPVDSNIL LKEWSGSALPEDIHSTFNSLTLQFDSDFFISKSGFSIQFSTSIASTCNDPGMPQNGTRYGDSRE PGDTITFQCDPGYQLQGQAKITCVQLNNRFFWQPDPPSCIAACGGNLTGPAGVILSPNYPQPYP PGKECDWRIKVNPDFVIALIFKSFSMEPSYDFLHIYEGKDSNSPLIGSFQGSQAPERIESSGNS LFLAFRSDASVGLSGFAIEFKEKPREACFDPGNIMNGTRIGTDFKLGSTVTYQCDSGYKIVDPS SIECVTGADGKPSWDRALPACQAPCGGQYMGSEGVVLSPNYPHNYTAGQICIYSITVPKEFVVF GQFAYFQTALNDLAELFDGTHPQARLLSSLSGSHSGETLPLATSNQILLRFSAKSGASARGFHF VYQAVPRTSDTQCSSVPEPRYGRRIGSEFSAGSIVRFECNPGYLLQGSTAIRCQSVPNALAQWN DTIPSCVVPCSGNFTQRRGTILSPGYPEPYGNNLNCVWKIIVSEGSGIQIQVISFATEQNWDSL EIHDGGDMTAPRLGSFSGTTVPALLNSTSNQLCLHFQSDISVAAAGFHLEYKTVGLAACQEPAL PSNGIKIGDRYMVNDVLSFQCEPGYTLQGRSHISCMPGTVRRWNYPSPLCIATCGGTLTSMSGV ILSPGFPGSYPNNLDCTWKISLPIGYGAHIQFLNFSTEANHDYLEIQNGPYHSSPMMGQFSGPD LPASLLSTTHETLIRFYSDHSQNRQGFKLSYQAYELQNCPDPPAFQNGFMINSDYSVGQSISFE CYPGYILLGHPVLTCQHGTDRNWNYPFPRCDAPCGYNVTSQNGTIYSPGFPDEYPILKDCLWLV TVPPGHGVYINFTLLQTEAVNDYIAVWDGPDQNSPQLGVFSGNTALETAYSSTNQVLLKFHSDF SNGGFFVLNFHAFQLKRCPPPPVVPQADLLTEDEDFEIGDFVKYQCHPGYTLLGSDTLTCKLSS QLLFQGSPPTCEAQCPANEVRTESSGVILSPGYPGNYFNSQTCAWSIKVEPNFNITLFVDTFQS EKQFDALEVFDGSSGQSPLLVVLSGNHTEQSNFTSRSNHLYLRWSTDHATSKKGFKIRYAAPYC SLTSTLKNGGVLNKTAGALGSKVQYFCKPGYRMIGHSNATCRRNPVGVYQWDSMAPLCQAVSCG IPEAPGNGSFTGNEFTLDSKVTYECNEGFKLDASQQATAVCQEDGLWSNRGKPPTCKPVPCPSI EGQLSEHVLWRLVSGSLNEYGAQVLLSCSPGYFLQGQRLLQCQANGTWNTEEDRPRCKVISCGS LSFPPNGNKIGTLTMYGATAIFTCNTGYTLVGSHVRECLANGLWSGSETRCLAGHCGSPDPIVN GHISGDGFSYRDTVVYQCNPGFRLVGTSVRICLQDHKWSGQTPVCVPITCGHPGNPAHGLTNGS EFNLNDLVNFTCHTGYLLQGASRAQCRSNGQWSSPLPICRVVNCSDPGFVENAVRHGQQNFPES FEYGTSVMYHCKKGFYLLGSSALTCMASGLWDRSLPKCLAISCGHPGVPANAVLTGELFTFGAT VQYSCKGGQILTGNSTRVCQEDSHWSGSLPHCSGNSPGFCGDPGTPAHGSRLGDEFKTKSLLRF SCEMGHQLRGSAERTCLVNGSWSGVQPVCEAVSCGNPGTPTNGMILSSDGILFSSSVIYACWEG YKTSGLMTRHCTANGTWTGTAPDCTIISCGDPGTLPNGIQFGTDFTFNKTVSYQCNPGYLMEPP TSPTIRCTKDGTWNQTRPLCKAVLCSQPPSVPNGKVEGSDFRWGASISYSCVDGYQLSHSAILS CEGRGVWKGEVPQCLPVFCGDPGTPAEGRLSGKSFTFKSEVFIQCKPPFVLVGSSRRTCQADGM WSGIQPTCIDPAHTACPDPGTPHFGIQNSSKGYEVGSTVFFRCRKGYHIQGSTTRTCLANLTWS GIQTECIPHACRQPETPAHADVRAIDLPAFGYTLVYTCHPGFFLAGGSEHRTCKADMKWTGKSP VCKSKGVREVNETVTKTPVPSDVFFINSVWKGYYEYLGKRQPATLTVDWFNATSSKVNATFTAA SQVQLELTGVYKKEEAHLLLKAFHIKGPADIFVSKFENDNWGLDGYVSSGLERGGFSFQGDIHG KDFGKFKLERQDPSNSDADSSNHYQGTSSGSVAAAILVPFFALILSGFAFYLYKHRTRPKVQYN GYAGHENSNGQASFENPMYDTNLKPTEAKAVRFDTTLNTVCTVV hide sequence

Ensembl Acc Id:

ENSRNOP00000054705 ⟸ ENSRNOT00000057897

RefSeq Acc Id:	XP_038950665 ⟸ XM_039094737
- Peptide Label:	isoform X1
- UniProtKB:	Q45NC2 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000108941 ⟸ ENSRNOT00000140156

Protein Domains

CUB Sushi

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1305103	AgrOrtholog
BioCyc Gene	G2FUF-10789	BioCyc
Ensembl Genes	ENSRNOG00000030719	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000057897	ENTREZGENE
	ENSRNOT00000057897.5	UniProtKB/TrEMBL
	ENSRNOT00000140156	ENTREZGENE
	ENSRNOT00000140156.1	UniProtKB/TrEMBL
Gene3D-CATH	2.60.120.290	UniProtKB/TrEMBL
	Complement Module, domain 1	UniProtKB/TrEMBL
InterPro	CUB	UniProtKB/TrEMBL
	SEZ6_CSMD_C4BPB_Regulators	UniProtKB/TrEMBL
	sperma_CUB_dom	UniProtKB/TrEMBL
	Sushi/SCR/CCP_sf	UniProtKB/TrEMBL
	Sushi_SCR_CCP	UniProtKB/TrEMBL
KEGG Report	rno:364634	UniProtKB/TrEMBL
NCBI Gene	Csmd1	ENTREZGENE
PANTHER	PROTEIN BETA CHAIN, PUTATIVE-RELATED	UniProtKB/TrEMBL
	PROTEIN CBR-CLEC-78	UniProtKB/TrEMBL
Pfam	CUB	UniProtKB/TrEMBL
	Sushi	UniProtKB/TrEMBL
PhenoGen	Csmd1	PhenoGen
PROSITE	CUB	UniProtKB/TrEMBL
	SUSHI	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000030719	RatGTEx
SMART	CCP	UniProtKB/TrEMBL
	CUB	UniProtKB/TrEMBL
Superfamily-SCOP	Complement_control_module	UniProtKB/TrEMBL
	CUB	UniProtKB/TrEMBL
UniProt	A0ABK0LDU1_RAT	UniProtKB/TrEMBL
	E9PT92	ENTREZGENE, UniProtKB/TrEMBL
	Q45NC2	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2006-03-24	Csmd1	CUB and Sushi multiple domains 1	Csmd1_predicted	CUB and Sushi multiple domains 1 (predicted)	Symbol and Name updated	1299863	APPROVED
2005-01-12	Csmd1_predicted	CUB and Sushi multiple domains 1 (predicted)			Symbol and Name status set to approved	70820	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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